void ana_dih_trans(const char *fn_trans,const char *fn_histo,
real **dih,int nframes,int nangles,
- const char *grpname,real t0,real dt,bool bRb,
+ const char *grpname,real t0,real dt,gmx_bool bRb,
const output_env_t oenv)
{
/* just a wrapper; declare extra args, then chuck away at end. */
}
-void low_ana_dih_trans(bool bTrans, const char *fn_trans,
- bool bHisto, const char *fn_histo, int maxchi,
+void low_ana_dih_trans(gmx_bool bTrans, const char *fn_trans,
+ gmx_bool bHisto, const char *fn_histo, int maxchi,
real **dih, int nlist, t_dlist dlist[], int nframes,
int nangles, const char *grpname, int xity[],
- real t0, real dt, bool bRb, real core_frac,
+ real t0, real dt, gmx_bool bRb, real core_frac,
const output_env_t oenv)
{
FILE *fp;
void get_chi_product_traj (real **dih,int nframes,int nangles, int nlist,
int maxchi, t_dlist dlist[], real time[],
- int **lookup, int *xity,bool bRb, bool bNormalize,
- real core_frac, bool bAll, const char *fnall,
+ int **lookup, int *xity,gmx_bool bRb, gmx_bool bNormalize,
+ real core_frac, gmx_bool bAll, const char *fnall,
const output_env_t oenv)
{
- bool bRotZero, bHaveChi=FALSE;
+ gmx_bool bRotZero, bHaveChi=FALSE;
int accum=0, index, i,j,k,Xi,n,b ;
real *chi_prtrj;
int *chi_prhist;
}
void read_ang_dih(const char *trj_fn,
- bool bAngles,bool bSaveAll,bool bRb,bool bPBC,
+ gmx_bool bAngles,gmx_bool bSaveAll,gmx_bool bRb,gmx_bool bPBC,
int maxangstat,int angstat[],
int *nframes,real **time,
int isize,atom_id index[],