Sort includes outside src/gromacs
[alexxy/gromacs.git] / src / programs / mdrun / mdrun.cpp
index c5df1ada6a3576842e769bc90cf99b5b341e823d..b3df7ca4a826700b949550dada55fa7f3a213f51 100644 (file)
  * To help us fund GROMACS development, we humbly ask that you cite
  * the research papers on the package. Check out http://www.gromacs.org.
  */
-#include "mdrun_main.h"
+#include "gmxpre.h"
 
 #include "config.h"
 
 #include <stdio.h>
 #include <string.h>
 
+#include "gromacs/commandline/pargs.h"
+#include "gromacs/fileio/filenm.h"
 #include "gromacs/legacyheaders/checkpoint.h"
 #include "gromacs/legacyheaders/copyrite.h"
 #include "gromacs/legacyheaders/macros.h"
 #include "gromacs/legacyheaders/readinp.h"
 #include "gromacs/legacyheaders/typedefs.h"
 #include "gromacs/legacyheaders/types/commrec.h"
-
-#include "gromacs/commandline/pargs.h"
-#include "gromacs/fileio/filenm.h"
 #include "gromacs/utility/fatalerror.h"
 
+#include "mdrun_main.h"
+
 static bool is_multisim_option_set(int argc, const char *const argv[])
 {
     for (int i = 0; i < argc; ++i)
@@ -408,7 +409,7 @@ int gmx_mdrun(int argc, char *argv[])
     };
     t_commrec    *cr;
     t_filenm      fnm[] = {
-        { efTPX, NULL,      NULL,       ffREAD },
+        { efTPR, NULL,      NULL,       ffREAD },
         { efTRN, "-o",      NULL,       ffWRITE },
         { efCOMPRESSED, "-x", NULL,     ffOPTWR },
         { efCPT, "-cpi",    NULL,       ffOPTRD },