-add_subdirectory(mdrun)
-if (NOT GMX_FAHCORE)
- add_subdirectory(g_ana)
- add_subdirectory(g_protonate)
- add_subdirectory(g_x2top)
- add_subdirectory(gmxcheck)
- add_subdirectory(gmxdump)
- add_subdirectory(grompp)
- add_subdirectory(pdb2gmx)
- add_subdirectory(tpbconv)
-endif (NOT GMX_FAHCORE)
+#
+# This file is part of the GROMACS molecular simulation package.
+#
+# Copyright (c) 2010,2011,2012,2013,2014, by the GROMACS development team, led by
+# Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
+# and including many others, as listed in the AUTHORS file in the
+# top-level source directory and at http://www.gromacs.org.
+#
+# GROMACS is free software; you can redistribute it and/or
+# modify it under the terms of the GNU Lesser General Public License
+# as published by the Free Software Foundation; either version 2.1
+# of the License, or (at your option) any later version.
+#
+# GROMACS is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with GROMACS; if not, see
+# http://www.gnu.org/licenses, or write to the Free Software Foundation,
+# Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+#
+# If you want to redistribute modifications to GROMACS, please
+# consider that scientific software is very special. Version
+# control is crucial - bugs must be traceable. We will be happy to
+# consider code for inclusion in the official distribution, but
+# derived work must not be called official GROMACS. Details are found
+# in the README & COPYING files - if they are missing, get the
+# official version at http://www.gromacs.org.
+#
+# To help us fund GROMACS development, we humbly ask that you cite
+# the research papers on the package. Check out http://www.gromacs.org.
+
+file(GLOB MDRUN_SOURCES mdrun/*.c mdrun/*.cpp)
+# make an "object library" that we can re-use for multiple targets
+add_library(mdrun_objlib OBJECT ${MDRUN_SOURCES})
+
+if(GMX_FAHCORE)
+ # The lack of a real source file here alongside the object library
+ # may break some generators, according to CMake documentation. If
+ # so, we can consider adding some dummy file to make it work.
+ add_library(fahcore $<TARGET_OBJECTS:mdrun_objlib>)
+elseif(GMX_BUILD_MDRUN_ONLY)
+ add_executable(mdrun $<TARGET_OBJECTS:mdrun_objlib> mdrun_main.cpp)
+ target_link_libraries(mdrun libgromacs ${GMX_EXE_LINKER_FLAGS})
+ set(BINARY_NAME "mdrun${GMX_BINARY_SUFFIX}")
+ set_target_properties(mdrun PROPERTIES
+ OUTPUT_NAME "${BINARY_NAME}"
+ COMPILE_FLAGS "${OpenMP_C_FLAGS}")
+ install(TARGETS mdrun DESTINATION ${BIN_INSTALL_DIR} COMPONENT mdrun)
+ file(WRITE ${CMAKE_CURRENT_BINARY_DIR}/gmx-completion-${BINARY_NAME}.bash
+ "complete -o nospace -F _gmx_mdrun_compl ${BINARY_NAME}")
+ install(FILES ${CMAKE_CURRENT_BINARY_DIR}/gmx-completion-${BINARY_NAME}.bash
+ DESTINATION ${BIN_INSTALL_DIR} COMPONENT runtime)
+else()
+ file(GLOB GMX_MAIN_SOURCES gmx.cpp legacymodules.cpp)
+ if(GMX_X11)
+ file(GLOB VIEW_SOURCES view/*.cpp)
+ else()
+ file(GLOB VIEW_SOURCES view/view.cpp)
+ endif()
+ add_library(view_objlib OBJECT ${VIEW_SOURCES})
+ add_executable(gmx
+ ${GMX_MAIN_SOURCES}
+ $<TARGET_OBJECTS:mdrun_objlib>
+ $<TARGET_OBJECTS:view_objlib>)
+ target_link_libraries(gmx libgromacs ${GMX_EXE_LINKER_FLAGS})
+ if(GMX_X11)
+ target_link_libraries(gmx ${X11_LIBRARIES})
+ endif()
+ set(BINARY_NAME "gmx${GMX_BINARY_SUFFIX}")
+ set_target_properties(gmx PROPERTIES
+ OUTPUT_NAME "${BINARY_NAME}"
+ COMPILE_FLAGS "${OpenMP_C_FLAGS}")
+ install(TARGETS gmx
+ RUNTIME DESTINATION ${BIN_INSTALL_DIR})
+
+ ########################
+ # Completion generation
+
+ include(gmxCustomCommandUtilities)
+
+ set(COMPLETION_DIR ${CMAKE_CURRENT_SOURCE_DIR}/completion)
+ # Using GMX_BUILD_HELP here is somewhat confusing, but the conditions when
+ # this can be done are exactly the same (ability to run the compiled
+ # binaries).
+ if (GMX_BUILD_HELP)
+ gmx_add_custom_output_target(completion OUTPUT STAMP
+ COMMAND ${CMAKE_COMMAND}
+ -D GMX_EXECUTABLE=$<TARGET_FILE:gmx>
+ -D ERRORS_ARE_FATAL=${GMX_BUILD_HELP_FORCE}
+ -P ${CMAKE_CURRENT_SOURCE_DIR}/BuildCompletions.cmake
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ DEPENDS gmx ${CMAKE_CURRENT_SOURCE_DIR}/BuildCompletions.cmake
+ COMMENT "Generating command-line completions for programs")
+ set_target_properties(completion PROPERTIES EXCLUDE_FROM_ALL OFF)
+ set_directory_properties(PROPERTIES
+ ADDITIONAL_MAKE_CLEAN_FILES "completion")
+ set(COMPLETION_DIR ${CMAKE_CURRENT_BINARY_DIR}/completion)
+ endif()
+ if (SOURCE_IS_SOURCE_DISTRIBUTION OR GMX_BUILD_HELP)
+ install(DIRECTORY ${COMPLETION_DIR}/
+ DESTINATION ${BIN_INSTALL_DIR} COMPONENT runtime OPTIONAL)
+ file(WRITE ${CMAKE_CURRENT_BINARY_DIR}/gmx-completion-${BINARY_NAME}.bash
+ "complete -o nospace -F _gmx_compl ${BINARY_NAME}")
+ install(FILES ${CMAKE_CURRENT_BINARY_DIR}/gmx-completion-${BINARY_NAME}.bash
+ DESTINATION ${BIN_INSTALL_DIR} COMPONENT runtime)
+ endif()
+
+ if (GMX_SYMLINK_OLD_BINARY_NAMES)
+ configure_file(CreateLinks.cmake.cmakein CreateLinks.cmake @ONLY)
+ set(CREATE_LINKS_SCRIPT ${CMAKE_CURRENT_BINARY_DIR}/CreateLinks.cmake)
+ install(SCRIPT ${CREATE_LINKS_SCRIPT} COMPONENT links)
+ endif()
+
+ if(BUILD_TESTING)
+ add_subdirectory(mdrun/tests)
+ endif()
+endif()
biod.pnpi.spb.ru / alexxy / gromacs.git / blobdiff