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[alexxy/gromacs.git] / src / gromacs / trajectoryanalysis / analysissettings.cpp

diff --git a/src/gromacs/trajectoryanalysis/analysissettings.cpp b/src/gromacs/trajectoryanalysis/analysissettings.cpp
index 5e3baaf4656df70bdfbb5dc98994a51872983841..6cd3ffc8807ff751b4734bb6c6575f16f439cd53 100644 (file)
--- a/src/gromacs/trajectoryanalysis/analysissettings.cpp
+++ b/src/gromacs/trajectoryanalysis/analysissettings.cpp
@@ -1,7 +1,8 @@
 /*
  * This file is part of the GROMACS molecular simulation package.
  *
- * Copyright (c) 2010,2011,2012,2013,2014,2015,2016,2017,2018,2019, by the GROMACS development team, led by
+ * Copyright (c) 2010-2018, The GROMACS development team.
+ * Copyright (c) 2019, by the GROMACS development team, led by
  * Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
  * and including many others, as listed in the AUTHORS file in the
  * top-level source directory and at http://www.gromacs.org.
@@ -58,83 +59,70 @@ namespace gmx
  * TrajectoryAnalysisSettings
  */
 
-TrajectoryAnalysisSettings::TrajectoryAnalysisSettings()
-    : impl_(new Impl)
+TrajectoryAnalysisSettings::TrajectoryAnalysisSettings() : impl_(new Impl)
 {
     impl_->frflags |= TRX_NEED_X;
 }
 
 
-TrajectoryAnalysisSettings::~TrajectoryAnalysisSettings()
-{
-}
+TrajectoryAnalysisSettings::~TrajectoryAnalysisSettings() {}
 
 
-void TrajectoryAnalysisSettings::setOptionsModuleSettings(
-        ICommandLineOptionsModuleSettings *settings)
+void TrajectoryAnalysisSettings::setOptionsModuleSettings(ICommandLineOptionsModuleSettings* settings)
 {
     impl_->optionsModuleSettings_ = settings;
 }
 
 
-TimeUnit
-TrajectoryAnalysisSettings::timeUnit() const
+TimeUnit TrajectoryAnalysisSettings::timeUnit() const
 {
     return impl_->timeUnit;
 }
 
 
-const AnalysisDataPlotSettings &
-TrajectoryAnalysisSettings::plotSettings() const
+const AnalysisDataPlotSettings& TrajectoryAnalysisSettings::plotSettings() const
 {
     return impl_->plotSettings;
 }
 
 
-unsigned long
-TrajectoryAnalysisSettings::flags() const
+unsigned long TrajectoryAnalysisSettings::flags() const
 {
     return impl_->flags;
 }
 
 
-bool
-TrajectoryAnalysisSettings::hasFlag(unsigned long flag) const
+bool TrajectoryAnalysisSettings::hasFlag(unsigned long flag) const
 {
     return (impl_->flags & flag) != 0U;
 }
 
 
-bool
-TrajectoryAnalysisSettings::hasPBC() const
+bool TrajectoryAnalysisSettings::hasPBC() const
 {
     return impl_->bPBC;
 }
 
 
-bool
-TrajectoryAnalysisSettings::hasRmPBC() const
+bool TrajectoryAnalysisSettings::hasRmPBC() const
 {
     return impl_->bRmPBC;
 }
 
 
-int
-TrajectoryAnalysisSettings::frflags() const
+int TrajectoryAnalysisSettings::frflags() const
 {
     return impl_->frflags;
 }
 
 
-void
-TrajectoryAnalysisSettings::setFlags(unsigned long flags)
+void TrajectoryAnalysisSettings::setFlags(unsigned long flags)
 {
     impl_->flags = flags;
 }
 
 
-void
-TrajectoryAnalysisSettings::setFlag(unsigned long flag, bool bSet)
+void TrajectoryAnalysisSettings::setFlag(unsigned long flag, bool bSet)
 {
     if (bSet)
     {
@@ -147,28 +135,24 @@ TrajectoryAnalysisSettings::setFlag(unsigned long flag, bool bSet)
 }
 
 
-void
-TrajectoryAnalysisSettings::setPBC(bool bPBC)
+void TrajectoryAnalysisSettings::setPBC(bool bPBC)
 {
     impl_->bPBC = bPBC;
 }
 
 
-void
-TrajectoryAnalysisSettings::setRmPBC(bool bRmPBC)
+void TrajectoryAnalysisSettings::setRmPBC(bool bRmPBC)
 {
     impl_->bRmPBC = bRmPBC;
 }
 
 
-void
-TrajectoryAnalysisSettings::setFrameFlags(int frflags)
+void TrajectoryAnalysisSettings::setFrameFlags(int frflags)
 {
     impl_->frflags = frflags;
 }
 
-void
-TrajectoryAnalysisSettings::setHelpText(const ArrayRef<const char *const> &help)
+void TrajectoryAnalysisSettings::setHelpText(const ArrayRef<const char* const>& help)
 {
     GMX_RELEASE_ASSERT(impl_->optionsModuleSettings_ != nullptr,
                        "setHelpText() called in invalid context");