gromacs cpp: clean up -Wunused-parameter warnings

[alexxy/gromacs.git] / src / gromacs / selection / sm_simple.cpp

diff --git a/src/gromacs/selection/sm_simple.cpp b/src/gromacs/selection/sm_simple.cpp
index c14c357f6610ff0a00c5feaf1451e644f9f013b7..bf4463731f77d04804218bd4551b3b11de71b611 100644 (file)
--- a/src/gromacs/selection/sm_simple.cpp
+++ b/src/gromacs/selection/sm_simple.cpp
@@ -67,7 +67,17 @@ evaluate_resnr(t_topology *top, t_trxframe *fr, t_pbc *pbc,
 static void
 evaluate_resindex(t_topology *top, t_trxframe *fr, t_pbc *pbc,
                   gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data);
-/** Checks whether molecule information is present in the topology. */
+/*! \brief
+ * Checks whether molecule information is present in the topology.
+ *
+ * \param[in] top  Topology structure.
+ * \param     npar Not used.
+ * \param     param Not used.
+ * \param     data Not used.
+ * \returns   0 if molecule info is present in the topology, -1 otherwise.
+ *
+ * If molecule information is not found, also prints an error message.
+ */
 static void
 check_molecules(t_topology *top, int npar, gmx_ana_selparam_t *param, void *data);
 /** Evaluates the \p molindex selection keyword. */
@@ -82,7 +92,17 @@ evaluate_atomname(t_topology *top, t_trxframe *fr, t_pbc *pbc,
 static void
 evaluate_pdbatomname(t_topology *top, t_trxframe *fr, t_pbc *pbc,
                      gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data);
-/** Checks whether atom types are present in the topology. */
+/*! \brief
+ * Checks whether atom types are present in the topology.
+ *
+ * \param[in] top  Topology structure.
+ * \param     npar Not used.
+ * \param     param Not used.
+ * \param     data Not used.
+ * \returns   0 if atom types are present in the topology, -1 otherwise.
+ *
+ * If the atom types are not found, also prints an error message.
+ */
 static void
 check_atomtype(t_topology *top, int npar, gmx_ana_selparam_t *param, void *data);
 /** Evaluates the \p atomtype selection keyword. */
@@ -105,7 +125,17 @@ evaluate_mass(t_topology *top, t_trxframe *fr, t_pbc *pbc,
 static void
 evaluate_charge(t_topology *top, t_trxframe *fr, t_pbc *pbc,
                 gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data);
-/** Checks whether PDB info is present in the topology. */
+/*! \brief
+ * Checks whether PDB info is present in the topology.
+ *
+ * \param[in] top  Topology structure.
+ * \param     npar Not used.
+ * \param     param Not used.
+ * \param     data Not used.
+ * \returns   0 if PDB info is present in the topology, -1 otherwise.
+ *
+ * If PDB info is not found, also prints an error message.
+ */
 static void
 check_pdbinfo(t_topology *top, int npar, gmx_ana_selparam_t *param, void *data);
 /** Evaluates the \p altloc selection keyword. */
@@ -447,8 +477,8 @@ gmx_ana_selmethod_t sm_z = {
  * Copies \p g to \p out->u.g.
  */
 static void
-evaluate_all(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-             gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_all(t_topology * /* top */, t_trxframe * /* fr */, t_pbc * /* pbc */,
+             gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void * /* data */)
 {
     gmx_ana_index_copy(out->u.g, g, false);
 }
@@ -460,8 +490,8 @@ evaluate_all(t_topology *top, t_trxframe *fr, t_pbc *pbc,
  * Returns an empty \p out->u.g.
  */
 static void
-evaluate_none(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-              gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_none(t_topology * /* top */, t_trxframe * /* fr */, t_pbc * /* pbc */,
+              gmx_ana_index_t * /* g */, gmx_ana_selvalue_t *out, void * /* data */)
 {
     out->u.g->isize = 0;
 }
@@ -473,8 +503,8 @@ evaluate_none(t_topology *top, t_trxframe *fr, t_pbc *pbc,
  * Returns the indices for each atom in \p out->u.i.
  */
 static void
-evaluate_atomnr(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-                gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_atomnr(t_topology * /* top */, t_trxframe * /* fr */, t_pbc * /* pbc */,
+                gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void * /* data */)
 {
     int  i;
 
@@ -492,8 +522,8 @@ evaluate_atomnr(t_topology *top, t_trxframe *fr, t_pbc *pbc,
  * Returns the residue numbers for each atom in \p out->u.i.
  */
 static void
-evaluate_resnr(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-               gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_resnr(t_topology *top, t_trxframe * /* fr */, t_pbc * /* pbc */,
+               gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void * /* data */)
 {
     int  i;
     int  resind;
@@ -513,8 +543,8 @@ evaluate_resnr(t_topology *top, t_trxframe *fr, t_pbc *pbc,
  * Returns the residue indices for each atom in \p out->u.i.
  */
 static void
-evaluate_resindex(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-                  gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_resindex(t_topology *top, t_trxframe * /* fr */, t_pbc * /* pbc */,
+                  gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void * /* data */)
 {
     int  i;
 
@@ -525,17 +555,8 @@ evaluate_resindex(t_topology *top, t_trxframe *fr, t_pbc *pbc,
     }
 }
 
-/*!
- * \param[in] top  Topology structure.
- * \param     npar Not used.
- * \param     param Not used.
- * \param     data Not used.
- * \returns   0 if molecule info is present in the topology, -1 otherwise.
- *
- * If molecule information is not found, also prints an error message.
- */
 static void
-check_molecules(t_topology *top, int npar, gmx_ana_selparam_t *param, void *data)
+check_molecules(t_topology *top, int /* npar */, gmx_ana_selparam_t * /* param */, void * /* data */)
 {
     bool bOk;
 
@@ -553,8 +574,8 @@ check_molecules(t_topology *top, int npar, gmx_ana_selparam_t *param, void *data
  * Returns the molecule indices for each atom in \p out->u.i.
  */
 static void
-evaluate_molindex(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-                  gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_molindex(t_topology *top, t_trxframe * /* fr */, t_pbc * /* pbc */,
+                  gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void * /* data */)
 {
     int  i, j;
 
@@ -576,8 +597,8 @@ evaluate_molindex(t_topology *top, t_trxframe *fr, t_pbc *pbc,
  * Returns the atom name for each atom in \p out->u.s.
  */
 static void
-evaluate_atomname(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-                  gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_atomname(t_topology *top, t_trxframe * /* fr */, t_pbc * /* pbc */,
+                  gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void * /* data */)
 {
     int  i;
 
@@ -595,8 +616,8 @@ evaluate_atomname(t_topology *top, t_trxframe *fr, t_pbc *pbc,
  * Returns the PDB atom name for each atom in \p out->u.s.
  */
 static void
-evaluate_pdbatomname(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-                     gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_pdbatomname(t_topology *top, t_trxframe * /* fr */, t_pbc * /* pbc */,
+                     gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void * /* data */)
 {
     int  i;
 
@@ -612,17 +633,8 @@ evaluate_pdbatomname(t_topology *top, t_trxframe *fr, t_pbc *pbc,
     }
 }
 
-/*!
- * \param[in] top  Topology structure.
- * \param     npar Not used.
- * \param     param Not used.
- * \param     data Not used.
- * \returns   0 if atom types are present in the topology, -1 otherwise.
- *
- * If the atom types are not found, also prints an error message.
- */
 static void
-check_atomtype(t_topology *top, int npar, gmx_ana_selparam_t *param, void *data)
+check_atomtype(t_topology *top, int /* npar */, gmx_ana_selparam_t * /* param */, void * /* data */)
 {
     bool bOk;
 
@@ -641,8 +653,8 @@ check_atomtype(t_topology *top, int npar, gmx_ana_selparam_t *param, void *data)
  * Segfaults if atom types are not found in the topology.
  */
 static void
-evaluate_atomtype(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-                  gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_atomtype(t_topology *top, t_trxframe * /* fr */, t_pbc * /* pbc */,
+                  gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void * /* data */)
 {
     int  i;
 
@@ -660,8 +672,8 @@ evaluate_atomtype(t_topology *top, t_trxframe *fr, t_pbc *pbc,
  * Returns the residue name for each atom in \p out->u.s.
  */
 static void
-evaluate_resname(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-                 gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_resname(t_topology *top, t_trxframe * /* fr */, t_pbc * /* pbc */,
+                 gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void * /* data */)
 {
     int  i;
     int  resind;
@@ -681,8 +693,8 @@ evaluate_resname(t_topology *top, t_trxframe *fr, t_pbc *pbc,
  * Returns the insertion code for each atom in \p out->u.s.
  */
 static void
-evaluate_insertcode(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-                    gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_insertcode(t_topology *top, t_trxframe * /* fr */, t_pbc * /* pbc */,
+                    gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void * /* data */)
 {
     int  i;
     int  resind;
@@ -702,8 +714,8 @@ evaluate_insertcode(t_topology *top, t_trxframe *fr, t_pbc *pbc,
  * Returns the chain for each atom in \p out->u.s.
  */
 static void
-evaluate_chain(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-               gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_chain(t_topology *top, t_trxframe * /* fr */, t_pbc * /* pbc */,
+               gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void * /* data */)
 {
     int  i;
     int  resind;
@@ -723,8 +735,8 @@ evaluate_chain(t_topology *top, t_trxframe *fr, t_pbc *pbc,
  * Returns the mass for each atom in \p out->u.r.
  */
 static void
-evaluate_mass(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-              gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_mass(t_topology *top, t_trxframe * /* fr */, t_pbc * /* pbc */,
+              gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void * /* data */)
 {
     int  i;
 
@@ -742,8 +754,8 @@ evaluate_mass(t_topology *top, t_trxframe *fr, t_pbc *pbc,
  * Returns the charge for each atom in \p out->u.r.
  */
 static void
-evaluate_charge(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-                gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_charge(t_topology *top, t_trxframe * /* fr */, t_pbc * /* pbc */,
+                gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void * /* data */)
 {
     int  i;
 
@@ -754,17 +766,8 @@ evaluate_charge(t_topology *top, t_trxframe *fr, t_pbc *pbc,
     }
 }
 
-/*!
- * \param[in] top  Topology structure.
- * \param     npar Not used.
- * \param     param Not used.
- * \param     data Not used.
- * \returns   0 if PDB info is present in the topology, -1 otherwise.
- *
- * If PDB info is not found, also prints an error message.
- */
 static void
-check_pdbinfo(t_topology *top, int npar, gmx_ana_selparam_t *param, void *data)
+check_pdbinfo(t_topology *top, int /* npar */, gmx_ana_selparam_t * /* param */, void * /* data */)
 {
     bool bOk;
 
@@ -782,8 +785,8 @@ check_pdbinfo(t_topology *top, int npar, gmx_ana_selparam_t *param, void *data)
  * Returns the alternate location identifier for each atom in \p out->u.s.
  */
 static void
-evaluate_altloc(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-                gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_altloc(t_topology *top, t_trxframe * /* fr */, t_pbc * /* pbc */,
+                gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void * /* data */)
 {
     int  i;
 
@@ -802,8 +805,8 @@ evaluate_altloc(t_topology *top, t_trxframe *fr, t_pbc *pbc,
  * Segfaults if PDB info is not found in the topology.
  */
 static void
-evaluate_occupancy(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-                   gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_occupancy(t_topology *top, t_trxframe * /* fr */, t_pbc * /* pbc */,
+                   gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void * /* data */)
 {
     int  i;
 
@@ -822,8 +825,8 @@ evaluate_occupancy(t_topology *top, t_trxframe *fr, t_pbc *pbc,
  * Segfaults if PDB info is not found in the topology.
  */
 static void
-evaluate_betafactor(t_topology *top, t_trxframe *fr, t_pbc *pbc,
-                    gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void *data)
+evaluate_betafactor(t_topology *top, t_trxframe * /* fr */, t_pbc * /* pbc */,
+                    gmx_ana_index_t *g, gmx_ana_selvalue_t *out, void * /* data */)
 {
     int  i;