/*
* This file is part of the GROMACS molecular simulation package.
*
- * Copyright (c) 2009,2010,2011,2012,2013,2014,2015,2018,2019, by the GROMACS development team, led by
+ * Copyright (c) 2009-2018, The GROMACS development team.
+ * Copyright (c) 2019, by the GROMACS development team, led by
* Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
* and including many others, as listed in the AUTHORS file in the
* top-level source directory and at http://www.gromacs.org.
*/
enum SelectionStringMatchType
{
- eStringMatchType_Auto, //!< Deduce from the string.
- eStringMatchType_Exact, //!< Match as a literal string.
- eStringMatchType_Wildcard, //!< Match using ? and * as wildcards.
- eStringMatchType_RegularExpression //!< Match using regular expressions.
+ eStringMatchType_Auto, //!< Deduce from the string.
+ eStringMatchType_Exact, //!< Match as a literal string.
+ eStringMatchType_Wildcard, //!< Match using ? and * as wildcards.
+ eStringMatchType_RegularExpression //!< Match using regular expressions.
};
/*! \endcond */
class SelectionParserValue;
//! Container for a list of SelectionParserValue objects.
-typedef std::list<SelectionParserValue>
- SelectionParserValueList;
+typedef std::list<SelectionParserValue> SelectionParserValueList;
//! Smart pointer type for managing a SelectionParserValueList.
-typedef std::unique_ptr<SelectionParserValueList>
- SelectionParserValueListPointer;
+typedef std::unique_ptr<SelectionParserValueList> SelectionParserValueListPointer;
/*! \internal
* \brief
*/
class SelectionParserValue
{
- public:
- //! Allocates and initializes an empty value list.
- static SelectionParserValueListPointer createList()
+public:
+ //! Allocates and initializes an empty value list.
+ static SelectionParserValueListPointer createList()
+ {
+ return std::make_unique<SelectionParserValueList>();
+ }
+ /*! \brief
+ * Allocates and initializes a value list with a single value.
+ *
+ * \param[in] value Initial value to put in the list.
+ * \returns Pointer to a new value list that contains \p value.
+ */
+ static SelectionParserValueListPointer createList(const SelectionParserValue& value)
+ {
+ SelectionParserValueListPointer list(new SelectionParserValueList);
+ list->push_back(value);
+ return list;
+ }
+ /*! \brief
+ * Allocates and initializes an expression value.
+ *
+ * \param[in] expr Root of the expression tree to assign to the value.
+ * \returns The newly created value.
+ */
+ static SelectionParserValue createExpr(const gmx::SelectionTreeElementPointer& expr)
+ {
+ return SelectionParserValue(expr);
+ }
+ /*! \brief
+ * Allocates and initializes a constant integer value.
+ *
+ * \param[in] value Integer value to assign to the value.
+ * \param[in] location Location of the value.
+ * \returns The newly created value.
+ */
+ static SelectionParserValue createInteger(int value, const SelectionLocation& location)
+ {
+ SelectionParserValue result(INT_VALUE, location);
+ result.u.i.i1 = result.u.i.i2 = value;
+ return result;
+ }
+ /*! \brief
+ * Allocates and initializes a constant integer range value.
+ *
+ * \param[in] from Beginning of the range to assign to the value.
+ * \param[in] to End of the range to assign to the value.
+ * \param[in] location Location of the value.
+ * \returns The newly created value.
+ */
+ static SelectionParserValue createIntegerRange(int from, int to, const SelectionLocation& location)
+ {
+ SelectionParserValue result(INT_VALUE, location);
+ result.u.i.i1 = from;
+ result.u.i.i2 = to;
+ return result;
+ }
+ /*! \brief
+ * Allocates and initializes a constant floating-point value.
+ *
+ * \param[in] value Floating-point value to assign to the value.
+ * \param[in] location Location of the value.
+ * \returns The newly created value.
+ */
+ static SelectionParserValue createReal(real value, const SelectionLocation& location)
+ {
+ SelectionParserValue result(REAL_VALUE, location);
+ result.u.r.r1 = result.u.r.r2 = value;
+ return result;
+ }
+ /*! \brief
+ * Allocates and initializes a constant floating-point range value.
+ *
+ * \param[in] from Beginning of the range to assign to the value.
+ * \param[in] to End of the range to assign to the value.
+ * \param[in] location Location of the value.
+ * \returns The newly created value.
+ */
+ static SelectionParserValue createRealRange(real from, real to, const SelectionLocation& location)
+ {
+ SelectionParserValue result(REAL_VALUE, location);
+ result.u.r.r1 = from;
+ result.u.r.r2 = to;
+ return result;
+ }
+ /*! \brief
+ * Allocates and initializes a constant string value.
+ *
+ * \param[in] value String to assign to the value.
+ * \param[in] location Location of the value.
+ * \returns The newly created value.
+ */
+ static SelectionParserValue createString(const char* value, const SelectionLocation& location)
+ {
+ SelectionParserValue result(STR_VALUE, location);
+ result.str = value;
+ return result;
+ }
+ /*! \brief
+ * Allocates and initializes a constant position value.
+ *
+ * \param[in] value Position vector to assign to the value.
+ * \param[in] location Location of the value.
+ * \returns The newly created value.
+ */
+ static SelectionParserValue createPosition(rvec value, const SelectionLocation& location)
+ {
+ SelectionParserValue result(POS_VALUE, location);
+ copy_rvec(value, result.u.x);
+ return result;
+ }
+
+ //! Returns the location of this value in the parsed selection text.
+ const SelectionLocation& location() const { return location_; }
+ //! Returns true if the value comes from expression evaluation.
+ bool hasExpressionValue() const { return static_cast<bool>(expr); }
+
+ //! Returns the string value (\a type must be ::STR_VALUE).
+ const std::string& stringValue() const
+ {
+ GMX_ASSERT(type == STR_VALUE && !hasExpressionValue(),
+ "Attempted to retrieve string value from a non-string value");
+ return str;
+ }
+
+ // TODO: boost::any or similar could be nicer for the implementation.
+ //! Type of the value.
+ e_selvalue_t type;
+ //! Expression pointer if the value is the result of an expression.
+ gmx::SelectionTreeElementPointer expr;
+ //! String value for \a type ::STR_VALUE.
+ std::string str;
+ //! The actual value if \a expr is NULL and \a type is not ::STR_VALUE.
+ union {
+ //! The integer value/range (\a type ::INT_VALUE).
+ struct
{
- return std::make_unique<SelectionParserValueList>();
- }
- /*! \brief
- * Allocates and initializes a value list with a single value.
- *
- * \param[in] value Initial value to put in the list.
- * \returns Pointer to a new value list that contains \p value.
- */
- static SelectionParserValueListPointer
- createList(const SelectionParserValue &value)
+ //! Beginning of the range.
+ int i1;
+ //! End of the range; equals \a i1 for a single integer.
+ int i2;
+ } i;
+ //! The real value/range (\a type ::REAL_VALUE).
+ struct
{
- SelectionParserValueListPointer list(new SelectionParserValueList);
- list->push_back(value);
- return list;
- }
- /*! \brief
- * Allocates and initializes an expression value.
- *
- * \param[in] expr Root of the expression tree to assign to the value.
- * \returns The newly created value.
- */
- static SelectionParserValue
- createExpr(const gmx::SelectionTreeElementPointer &expr)
- {
- return SelectionParserValue(expr);
- }
- /*! \brief
- * Allocates and initializes a constant integer value.
- *
- * \param[in] value Integer value to assign to the value.
- * \param[in] location Location of the value.
- * \returns The newly created value.
- */
- static SelectionParserValue
- createInteger(int value, const SelectionLocation &location)
- {
- SelectionParserValue result(INT_VALUE, location);
- result.u.i.i1 = result.u.i.i2 = value;
- return result;
- }
- /*! \brief
- * Allocates and initializes a constant integer range value.
- *
- * \param[in] from Beginning of the range to assign to the value.
- * \param[in] to End of the range to assign to the value.
- * \param[in] location Location of the value.
- * \returns The newly created value.
- */
- static SelectionParserValue
- createIntegerRange(int from, int to, const SelectionLocation &location)
- {
- SelectionParserValue result(INT_VALUE, location);
- result.u.i.i1 = from;
- result.u.i.i2 = to;
- return result;
- }
- /*! \brief
- * Allocates and initializes a constant floating-point value.
- *
- * \param[in] value Floating-point value to assign to the value.
- * \param[in] location Location of the value.
- * \returns The newly created value.
- */
- static SelectionParserValue
- createReal(real value, const SelectionLocation &location)
- {
- SelectionParserValue result(REAL_VALUE, location);
- result.u.r.r1 = result.u.r.r2 = value;
- return result;
- }
- /*! \brief
- * Allocates and initializes a constant floating-point range value.
- *
- * \param[in] from Beginning of the range to assign to the value.
- * \param[in] to End of the range to assign to the value.
- * \param[in] location Location of the value.
- * \returns The newly created value.
- */
- static SelectionParserValue
- createRealRange(real from, real to, const SelectionLocation &location)
- {
- SelectionParserValue result(REAL_VALUE, location);
- result.u.r.r1 = from;
- result.u.r.r2 = to;
- return result;
- }
- /*! \brief
- * Allocates and initializes a constant string value.
- *
- * \param[in] value String to assign to the value.
- * \param[in] location Location of the value.
- * \returns The newly created value.
- */
- static SelectionParserValue
- createString(const char *value, const SelectionLocation &location)
- {
- SelectionParserValue result(STR_VALUE, location);
- result.str = value;
- return result;
- }
- /*! \brief
- * Allocates and initializes a constant position value.
- *
- * \param[in] value Position vector to assign to the value.
- * \param[in] location Location of the value.
- * \returns The newly created value.
- */
- static SelectionParserValue
- createPosition(rvec value, const SelectionLocation &location)
- {
- SelectionParserValue result(POS_VALUE, location);
- copy_rvec(value, result.u.x);
- return result;
- }
-
- //! Returns the location of this value in the parsed selection text.
- const SelectionLocation &location() const { return location_; }
- //! Returns true if the value comes from expression evaluation.
- bool hasExpressionValue() const { return static_cast<bool>(expr); }
-
- //! Returns the string value (\a type must be ::STR_VALUE).
- const std::string &stringValue() const
- {
- GMX_ASSERT(type == STR_VALUE && !hasExpressionValue(),
- "Attempted to retrieve string value from a non-string value");
- return str;
- }
-
- // TODO: boost::any or similar could be nicer for the implementation.
- //! Type of the value.
- e_selvalue_t type;
- //! Expression pointer if the value is the result of an expression.
- gmx::SelectionTreeElementPointer expr;
- //! String value for \a type ::STR_VALUE.
- std::string str;
- //! The actual value if \a expr is NULL and \a type is not ::STR_VALUE.
- union {
- //! The integer value/range (\a type ::INT_VALUE).
- struct {
- //! Beginning of the range.
- int i1;
- //! End of the range; equals \a i1 for a single integer.
- int i2;
- } i;
- //! The real value/range (\a type ::REAL_VALUE).
- struct {
- //! Beginning of the range.
- real r1;
- //! End of the range; equals \a r1 for a single number.
- real r2;
- } r;
- //! The position value (\a type ::POS_VALUE).
- rvec x;
- } u;
-
- private:
- /*! \brief
- * Initializes a new value.
- *
- * \param[in] type Type for the new value.
- * \param[in] location Location for the value.
- */
- SelectionParserValue(e_selvalue_t type, const SelectionLocation &location);
- /*! \brief
- * Initializes a new expression value.
- *
- * \param[in] expr Expression for the value.
- */
- explicit SelectionParserValue(const gmx::SelectionTreeElementPointer &expr);
-
- //! Location of the value in the parsed text.
- SelectionLocation location_;
+ //! Beginning of the range.
+ real r1;
+ //! End of the range; equals \a r1 for a single number.
+ real r2;
+ } r;
+ //! The position value (\a type ::POS_VALUE).
+ rvec x;
+ } u;
+
+private:
+ /*! \brief
+ * Initializes a new value.
+ *
+ * \param[in] type Type for the new value.
+ * \param[in] location Location for the value.
+ */
+ SelectionParserValue(e_selvalue_t type, const SelectionLocation& location);
+ /*! \brief
+ * Initializes a new expression value.
+ *
+ * \param[in] expr Expression for the value.
+ */
+ explicit SelectionParserValue(const gmx::SelectionTreeElementPointer& expr);
+
+ //! Location of the value in the parsed text.
+ SelectionLocation location_;
};
class SelectionParserParameter;
//! Container for a list of SelectionParserParameter objects.
-typedef std::list<SelectionParserParameter>
- SelectionParserParameterList;
+typedef std::list<SelectionParserParameter> SelectionParserParameterList;
//! Smart pointer type for managing a SelectionParserParameterList.
-typedef std::unique_ptr<SelectionParserParameterList>
- SelectionParserParameterListPointer;
+typedef std::unique_ptr<SelectionParserParameterList> SelectionParserParameterListPointer;
/*! \internal \brief
* Describes a parsed method parameter.
*/
class SelectionParserParameter
{
- public:
- // Default move constructor and assignment. Only needed for old compilers.
- //! \cond
- SelectionParserParameter(SelectionParserParameter &&o) noexcept
- : name_(std::move(o.name_)), location_(o.location_),
- values_(std::move(o.values_))
- {
- }
-
- SelectionParserParameter &operator=(SelectionParserParameter &&o) noexcept
- {
- name_ = std::move(o.name_);
- location_ = o.location_;
- values_ = std::move(o.values_);
- return *this;
- }
- //! \endcond
-
- //! Allocates and initializes an empty parameter list.
- static SelectionParserParameterListPointer createList()
- {
- return std::make_unique<SelectionParserParameterList>();
- }
- /*! \brief
- * Allocates and initializes a parsed method parameter.
- *
- * \param[in] name Name for the new parameter (can be NULL).
- * \param[in] values List of values for the parameter.
- * \param[in] location Location of the parameter.
- * \returns Pointer to the newly allocated parameter.
- * \throws std::bad_alloc if out of memory.
- */
- static SelectionParserParameter
- create(const char *name, SelectionParserValueListPointer values,
- const SelectionLocation &location)
- {
- return SelectionParserParameter(name, std::move(values), location);
- }
- //! \copydoc create(const char *, SelectionParserValueListPointer, const SelectionLocation &)
- static SelectionParserParameter
- create(const std::string &name, SelectionParserValueListPointer values,
- const SelectionLocation &location)
- {
- return SelectionParserParameter(name.c_str(), std::move(values), location);
- }
- /*! \brief
- * Allocates and initializes a parsed method parameter.
- *
- * \param[in] name Name for the new parameter (can be NULL).
- * \param[in] value Value for the parameter.
- * \param[in] location Location of the parameter.
- * \returns Pointer to the newly allocated parameter.
- * \throws std::bad_alloc if out of memory.
- *
- * This overload is a convenience wrapper for the case when creating
- * parameters outside the actual Bison parser and only a single value
- * is necessary.
- */
- static SelectionParserParameter
- create(const char *name, const SelectionParserValue &value,
- const SelectionLocation &location)
- {
- return create(name, SelectionParserValue::createList(value), location);
- }
- /*! \brief
- * Allocates and initializes a parsed method parameter.
- *
- * \param[in] name Name for the new parameter (can be NULL).
- * \param[in] expr Expression value for the parameter.
- * \returns Pointer to the newly allocated parameter.
- * \throws std::bad_alloc if out of memory.
- *
- * This overload is a convenience wrapper for the case when creating
- * parameters outside the actual Bison parser and only a single
- * expression value is necessary.
- */
- static SelectionParserParameter
- createFromExpression(const char *name,
- const SelectionTreeElementPointer &expr)
- {
- return create(name, SelectionParserValue::createExpr(expr),
- expr->location());
- }
- //! \copydoc createFromExpression(const char *, const SelectionTreeElementPointer &)
- static SelectionParserParameter
- createFromExpression(const std::string &name,
- const SelectionTreeElementPointer &expr)
- {
- return create(name.c_str(), SelectionParserValue::createExpr(expr),
- expr->location());
- }
-
- //! Returns the name of the parameter (may be empty).
- const std::string &name() const { return name_; }
- //! Returns the location of this parameter in the parsed selection text.
- const SelectionLocation &location() const { return location_; }
- //! Returns the values for the parameter.
- const SelectionParserValueList &values() const { return *values_; }
-
- private:
- /*! \brief
- * Initializes a parsed method parameter.
- *
- * \param[in] name Name for the new parameter (can be NULL).
- * \param[in] values List of values for the parameter.
- * \param[in] location Location of the parameter.
- * \throws std::bad_alloc if out of memory.
- */
- SelectionParserParameter(const char *name,
- SelectionParserValueListPointer values,
- const SelectionLocation &location);
-
- //! Name of the parameter.
- std::string name_;
- //! Location of the parameter in the parsed text.
- SelectionLocation location_;
-
- // TODO: Make private, there is only one direct user.
- public:
- //! Values for this parameter.
- SelectionParserValueListPointer values_;
+public:
+ // Default move constructor and assignment. Only needed for old compilers.
+ //! \cond
+ SelectionParserParameter(SelectionParserParameter&& o) noexcept :
+ name_(std::move(o.name_)),
+ location_(o.location_),
+ values_(std::move(o.values_))
+ {
+ }
+
+ SelectionParserParameter& operator=(SelectionParserParameter&& o) noexcept
+ {
+ name_ = std::move(o.name_);
+ location_ = o.location_;
+ values_ = std::move(o.values_);
+ return *this;
+ }
+ //! \endcond
+
+ //! Allocates and initializes an empty parameter list.
+ static SelectionParserParameterListPointer createList()
+ {
+ return std::make_unique<SelectionParserParameterList>();
+ }
+ /*! \brief
+ * Allocates and initializes a parsed method parameter.
+ *
+ * \param[in] name Name for the new parameter (can be NULL).
+ * \param[in] values List of values for the parameter.
+ * \param[in] location Location of the parameter.
+ * \returns Pointer to the newly allocated parameter.
+ * \throws std::bad_alloc if out of memory.
+ */
+ static SelectionParserParameter create(const char* name,
+ SelectionParserValueListPointer values,
+ const SelectionLocation& location)
+ {
+ return SelectionParserParameter(name, std::move(values), location);
+ }
+ //! \copydoc create(const char *, SelectionParserValueListPointer, const SelectionLocation &)
+ static SelectionParserParameter create(const std::string& name,
+ SelectionParserValueListPointer values,
+ const SelectionLocation& location)
+ {
+ return SelectionParserParameter(name.c_str(), std::move(values), location);
+ }
+ /*! \brief
+ * Allocates and initializes a parsed method parameter.
+ *
+ * \param[in] name Name for the new parameter (can be NULL).
+ * \param[in] value Value for the parameter.
+ * \param[in] location Location of the parameter.
+ * \returns Pointer to the newly allocated parameter.
+ * \throws std::bad_alloc if out of memory.
+ *
+ * This overload is a convenience wrapper for the case when creating
+ * parameters outside the actual Bison parser and only a single value
+ * is necessary.
+ */
+ static SelectionParserParameter create(const char* name,
+ const SelectionParserValue& value,
+ const SelectionLocation& location)
+ {
+ return create(name, SelectionParserValue::createList(value), location);
+ }
+ /*! \brief
+ * Allocates and initializes a parsed method parameter.
+ *
+ * \param[in] name Name for the new parameter (can be NULL).
+ * \param[in] expr Expression value for the parameter.
+ * \returns Pointer to the newly allocated parameter.
+ * \throws std::bad_alloc if out of memory.
+ *
+ * This overload is a convenience wrapper for the case when creating
+ * parameters outside the actual Bison parser and only a single
+ * expression value is necessary.
+ */
+ static SelectionParserParameter createFromExpression(const char* name,
+ const SelectionTreeElementPointer& expr)
+ {
+ return create(name, SelectionParserValue::createExpr(expr), expr->location());
+ }
+ //! \copydoc createFromExpression(const char *, const SelectionTreeElementPointer &)
+ static SelectionParserParameter createFromExpression(const std::string& name,
+ const SelectionTreeElementPointer& expr)
+ {
+ return create(name.c_str(), SelectionParserValue::createExpr(expr), expr->location());
+ }
+
+ //! Returns the name of the parameter (may be empty).
+ const std::string& name() const { return name_; }
+ //! Returns the location of this parameter in the parsed selection text.
+ const SelectionLocation& location() const { return location_; }
+ //! Returns the values for the parameter.
+ const SelectionParserValueList& values() const { return *values_; }
+
+private:
+ /*! \brief
+ * Initializes a parsed method parameter.
+ *
+ * \param[in] name Name for the new parameter (can be NULL).
+ * \param[in] values List of values for the parameter.
+ * \param[in] location Location of the parameter.
+ * \throws std::bad_alloc if out of memory.
+ */
+ SelectionParserParameter(const char* name,
+ SelectionParserValueListPointer values,
+ const SelectionLocation& location);
+
+ //! Name of the parameter.
+ std::string name_;
+ //! Location of the parameter in the parsed text.
+ SelectionLocation location_;
+
+ // TODO: Make private, there is only one direct user.
+public:
+ //! Values for this parameter.
+ SelectionParserValueListPointer values_;
};
} // namespace gmx
* If this function returns false, then Bison immediately aborts the parsing
* so that the caller can rethrow the exception.
*/
-bool
-_gmx_selparser_handle_exception(void *scanner, std::exception *ex);
+bool _gmx_selparser_handle_exception(void* scanner, std::exception* ex);
/*! \brief
* Handles errors in the selection parser.
*
* Any exceptions thrown from this method are again caught by Bison and result
* in termination of the parsing; the caller can then rethrow them.
*/
-bool
-_gmx_selparser_handle_error(void *scanner);
+bool _gmx_selparser_handle_error(void* scanner);
/** Propagates the flags for selection elements. */
-void
-_gmx_selelem_update_flags(const gmx::SelectionTreeElementPointer &sel);
+void _gmx_selelem_update_flags(const gmx::SelectionTreeElementPointer& sel);
/** Initializes the method parameter data of \ref SEL_EXPRESSION and
* \ref SEL_MODIFIER elements. */
-void
-_gmx_selelem_init_method_params(const gmx::SelectionTreeElementPointer &sel,
- void *scanner);
+void _gmx_selelem_init_method_params(const gmx::SelectionTreeElementPointer& sel, void* scanner);
/** Initializes the method for a \ref SEL_EXPRESSION selection element. */
-void
-_gmx_selelem_set_method(const gmx::SelectionTreeElementPointer &sel,
- struct gmx_ana_selmethod_t *method, void *scanner);
+void _gmx_selelem_set_method(const gmx::SelectionTreeElementPointer& sel,
+ struct gmx_ana_selmethod_t* method,
+ void* scanner);
/* An opaque pointer. */
#ifndef YY_TYPEDEF_YY_SCANNER_T
-#define YY_TYPEDEF_YY_SCANNER_T
+# define YY_TYPEDEF_YY_SCANNER_T
typedef void* yyscan_t;
#endif
/** \brief Creates a gmx::SelectionTreeElement for arithmetic expression evaluation.
* This function handles the creation of a gmx::SelectionTreeElement object for
* arithmetic expressions.
*/
-gmx::SelectionTreeElementPointer
-_gmx_sel_init_arithmetic(const gmx::SelectionTreeElementPointer &left,
- const gmx::SelectionTreeElementPointer &right,
- char op, yyscan_t scanner);
+gmx::SelectionTreeElementPointer _gmx_sel_init_arithmetic(const gmx::SelectionTreeElementPointer& left,
+ const gmx::SelectionTreeElementPointer& right,
+ char op,
+ yyscan_t scanner);
/** Creates a gmx::SelectionTreeElement for comparsion expression evaluation. */
-gmx::SelectionTreeElementPointer
-_gmx_sel_init_comparison(const gmx::SelectionTreeElementPointer &left,
- const gmx::SelectionTreeElementPointer &right,
- const char *cmpop, void *scanner);
+gmx::SelectionTreeElementPointer _gmx_sel_init_comparison(const gmx::SelectionTreeElementPointer& left,
+ const gmx::SelectionTreeElementPointer& right,
+ const char* cmpop,
+ void* scanner);
/** Creates a gmx::SelectionTreeElement for a keyword expression from the parsed data. */
-gmx::SelectionTreeElementPointer
-_gmx_sel_init_keyword(struct gmx_ana_selmethod_t *method,
- gmx::SelectionParserValueListPointer args,
- const char *rpost, void *scanner);
+gmx::SelectionTreeElementPointer _gmx_sel_init_keyword(struct gmx_ana_selmethod_t* method,
+ gmx::SelectionParserValueListPointer args,
+ const char* rpost,
+ void* scanner);
/** Creates a gmx::SelectionTreeElement for string-matching keyword expression. */
-gmx::SelectionTreeElementPointer
-_gmx_sel_init_keyword_strmatch(struct gmx_ana_selmethod_t *method,
- gmx::SelectionStringMatchType matchType,
- gmx::SelectionParserValueListPointer args,
- const char *rpost, void *scanner);
+gmx::SelectionTreeElementPointer _gmx_sel_init_keyword_strmatch(struct gmx_ana_selmethod_t* method,
+ gmx::SelectionStringMatchType matchType,
+ gmx::SelectionParserValueListPointer args,
+ const char* rpost,
+ void* scanner);
/** Creates a gmx::SelectionTreeElement for "keyword of" expression. */
-gmx::SelectionTreeElementPointer
-_gmx_sel_init_keyword_of(struct gmx_ana_selmethod_t *method,
- const gmx::SelectionTreeElementPointer &group,
- const char *rpost, void *scanner);
+gmx::SelectionTreeElementPointer _gmx_sel_init_keyword_of(struct gmx_ana_selmethod_t* method,
+ const gmx::SelectionTreeElementPointer& group,
+ const char* rpost,
+ void* scanner);
/** Creates a gmx::SelectionTreeElement for a method expression from the parsed data. */
-gmx::SelectionTreeElementPointer
-_gmx_sel_init_method(struct gmx_ana_selmethod_t *method,
- gmx::SelectionParserParameterListPointer params,
- const char *rpost, void *scanner);
+gmx::SelectionTreeElementPointer _gmx_sel_init_method(struct gmx_ana_selmethod_t* method,
+ gmx::SelectionParserParameterListPointer params,
+ const char* rpost,
+ void* scanner);
/** Creates a gmx::SelectionTreeElement for a modifier expression from the parsed data. */
-gmx::SelectionTreeElementPointer
-_gmx_sel_init_modifier(struct gmx_ana_selmethod_t *mod,
- gmx::SelectionParserParameterListPointer params,
- const gmx::SelectionTreeElementPointer &sel,
- void *scanner);
+gmx::SelectionTreeElementPointer _gmx_sel_init_modifier(struct gmx_ana_selmethod_t* mod,
+ gmx::SelectionParserParameterListPointer params,
+ const gmx::SelectionTreeElementPointer& sel,
+ void* scanner);
/** Creates a gmx::SelectionTreeElement for evaluation of reference positions. */
-gmx::SelectionTreeElementPointer
-_gmx_sel_init_position(const gmx::SelectionTreeElementPointer &expr,
- const char *type, void *scanner);
+gmx::SelectionTreeElementPointer _gmx_sel_init_position(const gmx::SelectionTreeElementPointer& expr,
+ const char* type,
+ void* scanner);
/** Creates a gmx::SelectionTreeElement for a constant position. */
-gmx::SelectionTreeElementPointer
-_gmx_sel_init_const_position(real x, real y, real z, void *scanner);
+gmx::SelectionTreeElementPointer _gmx_sel_init_const_position(real x, real y, real z, void* scanner);
/** Creates a gmx::SelectionTreeElement for a index group expression using group name. */
-gmx::SelectionTreeElementPointer
-_gmx_sel_init_group_by_name(const char *name, void *scanner);
+gmx::SelectionTreeElementPointer _gmx_sel_init_group_by_name(const char* name, void* scanner);
/** Creates a gmx::SelectionTreeElement for a index group expression using group index. */
-gmx::SelectionTreeElementPointer
-_gmx_sel_init_group_by_id(int id, void *scanner);
+gmx::SelectionTreeElementPointer _gmx_sel_init_group_by_id(int id, void* scanner);
/** Creates a gmx::SelectionTreeElement for a variable reference */
-gmx::SelectionTreeElementPointer
-_gmx_sel_init_variable_ref(const gmx::SelectionTreeElementPointer &sel,
- void *scanner);
+gmx::SelectionTreeElementPointer _gmx_sel_init_variable_ref(const gmx::SelectionTreeElementPointer& sel,
+ void* scanner);
/** Creates a root gmx::SelectionTreeElement for a selection. */
-gmx::SelectionTreeElementPointer
-_gmx_sel_init_selection(const char *name,
- const gmx::SelectionTreeElementPointer &sel,
- void *scanner);
+gmx::SelectionTreeElementPointer _gmx_sel_init_selection(const char* name,
+ const gmx::SelectionTreeElementPointer& sel,
+ void* scanner);
/** Creates a root gmx::SelectionTreeElement elements for a variable assignment. */
-gmx::SelectionTreeElementPointer
-_gmx_sel_assign_variable(const char *name,
- const gmx::SelectionTreeElementPointer &expr,
- void *scanner);
+gmx::SelectionTreeElementPointer _gmx_sel_assign_variable(const char* name,
+ const gmx::SelectionTreeElementPointer& expr,
+ void* scanner);
/** Appends a root gmx::SelectionTreeElement to a selection collection. */
-gmx::SelectionTreeElementPointer
-_gmx_sel_append_selection(const gmx::SelectionTreeElementPointer &sel,
- gmx::SelectionTreeElementPointer last,
- void *scanner);
+gmx::SelectionTreeElementPointer _gmx_sel_append_selection(const gmx::SelectionTreeElementPointer& sel,
+ gmx::SelectionTreeElementPointer last,
+ void* scanner);
/** Check whether the parser should finish. */
-bool
-_gmx_sel_parser_should_finish(void *scanner);
+bool _gmx_sel_parser_should_finish(void* scanner);
/* In params.c */
/** Initializes an array of parameters based on input from the selection parser. */
-void
-_gmx_sel_parse_params(const gmx::SelectionParserParameterList ¶ms,
- int nparam, struct gmx_ana_selparam_t *param,
- const gmx::SelectionTreeElementPointer &root,
- void *scanner);
+void _gmx_sel_parse_params(const gmx::SelectionParserParameterList& params,
+ int nparam,
+ struct gmx_ana_selparam_t* param,
+ const gmx::SelectionTreeElementPointer& root,
+ void* scanner);
#endif
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