x[i][YY] = mu[YY][YY]*x[i][YY]+mu[ZZ][YY]*x[i][ZZ];
x[i][ZZ] = mu[ZZ][ZZ]*x[i][ZZ];
}
- if (*scale_tot)
+ if (scale_tot != NULL)
{
/* The transposes of the scaling matrices are stored,
* so we need to do matrix multiplication in the inverse order.
if (inputrec->eI == eiSD1 && bDoConstr && !bFirstHalf)
{
+ wallcycle_start(wcycle, ewcUPDATE);
xprime = get_xprime(state, upd);
nth = gmx_omp_nthreads_get(emntUpdate);
DOMAINDECOMP(cr) ? cr->dd->gatindex : NULL);
}
inc_nrnb(nrnb, eNR_UPDATE, homenr);
+ wallcycle_stop(wcycle, ewcUPDATE);
if (bDoConstr)
{
if ((inputrec->eI == eiSD2) && !(bFirstHalf))
{
+ wallcycle_start(wcycle, ewcUPDATE);
xprime = get_xprime(state, upd);
nth = gmx_omp_nthreads_get(emntUpdate);
DOMAINDECOMP(cr) ? cr->dd->gatindex : NULL);
}
inc_nrnb(nrnb, eNR_UPDATE, homenr);
+ wallcycle_stop(wcycle, ewcUPDATE);
if (bDoConstr)
{
}
else
{
-#pragma omp parallel for num_threads(gmx_omp_nthreads_get(emntUpdate)) schedule(static)
+ nth = gmx_omp_nthreads_get(emntUpdate);
+
+#pragma omp parallel for num_threads(nth) schedule(static)
for (i = start; i < nrend; i++)
{
copy_rvec(upd->xp[i], state->x[i]);