Move read_tps_conf() to confio.h

[alexxy/gromacs.git] / src / gromacs / gmxana / gmx_trjcat.c

diff --git a/src/gromacs/gmxana/gmx_trjcat.c b/src/gromacs/gmxana/gmx_trjcat.c
index 0c416b07e55c25c408dde94559be4fe3ebd0680d..6f8463f63e58755937499a4b84245e3cdb939473 100644 (file)
--- a/src/gromacs/gmxana/gmx_trjcat.c
+++ b/src/gromacs/gmxana/gmx_trjcat.c
@@ -46,7 +46,6 @@
 #include "gromacs/fileio/pdbio.h"
 #include "gromacs/fileio/tngio.h"
 #include "gromacs/fileio/tngio_for_tools.h"
-#include "gromacs/fileio/tpxio.h"
 #include "gromacs/fileio/trnio.h"
 #include "gromacs/fileio/trxio.h"
 #include "gromacs/fileio/xtcio.h"
@@ -426,15 +425,17 @@ int gmx_trjcat(int argc, char *argv[])
         "Obviously the file to append to has to be the one with lowest starting",
         "time since one can only append at the end of a file.[PAR]",
         "If the [TT]-demux[tt] option is given, the N trajectories that are",
-        "read, are written in another order as specified in the [TT].xvg[tt] file.",
-        "The [TT].xvg[tt] file should contain something like:[PAR]",
-        "[TT]0  0  1  2  3  4  5[tt][BR]",
-        "[TT]2  1  0  2  3  5  4[tt][BR]",
-        "Where the first number is the time, and subsequent numbers point to",
+        "read, are written in another order as specified in the [REF].xvg[ref] file.",
+        "The [REF].xvg[ref] file should contain something like::",
+        "",
+        "    0  0  1  2  3  4  5",
+        "    2  1  0  2  3  5  4",
+        "",
+        "The first number is the time, and subsequent numbers point to",
         "trajectory indices.",
         "The frames corresponding to the numbers present at the first line",
         "are collected into the output trajectory. If the number of frames in",
-        "the trajectory does not match that in the [TT].xvg[tt] file then the program",
+        "the trajectory does not match that in the [REF].xvg[ref] file then the program",
         "tries to be smart. Beware."
     };
     static gmx_bool bVels           = TRUE;