Merge release-5-0 into master
[alexxy/gromacs.git] / src / gromacs / gmxana / gmx_make_edi.c
index ae44cedd911af5f0b9793317c62b85fd113c45e4..b036d0b511e87553383e9768bf8db3c5a4fed492 100644 (file)
 #include <string.h>
 #include "readinp.h"
 #include "gromacs/commandline/pargs.h"
-#include "sysstuff.h"
 #include "typedefs.h"
 #include "gromacs/utility/smalloc.h"
 #include "macros.h"
-#include "gmx_fatal.h"
-#include "vec.h"
-#include "pbc.h"
-#include "gromacs/fileio/futil.h"
+#include "gromacs/utility/fatalerror.h"
+#include "gromacs/math/vec.h"
+#include "gromacs/utility/futil.h"
 #include "gromacs/fileio/pdbio.h"
 #include "gromacs/fileio/confio.h"
 #include "gromacs/fileio/tpxio.h"
-#include "gromacs/fileio/matio.h"
-#include "mshift.h"
-#include "xvgr.h"
-#include "rmpbc.h"
+#include "gromacs/fileio/xvgr.h"
 #include "txtdump.h"
 #include "eigio.h"
-#include "index.h"
+#include "gromacs/topology/index.h"
 #include "gromacs/utility/cstringutil.h"
 
 typedef struct
@@ -862,7 +857,6 @@ int gmx_make_edi(int argc, char *argv[])
         printf("\n");
     }
 
-    EigvecFile = NULL;
     EigvecFile = opt2fn("-f", NFILE, fnm);
 
     /*read eigenvectors from eigvec.trr*/