gmxana: clean up -Wunused-parameter warnings

[alexxy/gromacs.git] / src / gromacs / gmxana / gmx_helix.c

diff --git a/src/gromacs/gmxana/gmx_helix.c b/src/gromacs/gmxana/gmx_helix.c
index 54b0bafc2923994877e780736f855af29de5309f..883ff82b7fdf9e243fb368f8396405d1f914bea6 100644 (file)
--- a/src/gromacs/gmxana/gmx_helix.c
+++ b/src/gromacs/gmxana/gmx_helix.c
@@ -260,8 +260,8 @@ int gmx_helix(int argc, char *argv[])
     snew(xref, top->atoms.nr);
     read_tpx(ftp2fn(efTPX, NFILE, fnm),
              NULL, NULL, &natoms, xref, NULL, NULL, NULL);
-    calc_hxprops(nres, bb, xref, box);
-    do_start_end(nres, bb, xref, &nbb, bbindex, &nca, caindex, bRange, rStart, rEnd);
+    calc_hxprops(nres, bb, xref);
+    do_start_end(nres, bb, &nbb, bbindex, &nca, caindex, bRange, rStart, rEnd);
     sfree(xref);
     if (bDBG)
     {
@@ -282,15 +282,15 @@ int gmx_helix(int argc, char *argv[])
         gmx_rmpbc(gpbc, natoms, box, x);
 
 
-        calc_hxprops(nres, bb, x, box);
+        calc_hxprops(nres, bb, x);
         if (bCheck)
         {
-            do_start_end(nres, bb, x, &nbb, bbindex, &nca, caindex, FALSE, 0, 0);
+            do_start_end(nres, bb, &nbb, bbindex, &nca, caindex, FALSE, 0, 0);
         }
 
         if (nca >= 5)
         {
-            rms = fit_ahx(nres, bb, natoms, nall, allindex, x, nca, caindex, box, bFit);
+            rms = fit_ahx(nres, bb, natoms, nall, allindex, x, nca, caindex, bFit);
 
             if (teller == 1)
             {
@@ -299,13 +299,13 @@ int gmx_helix(int argc, char *argv[])
             }
 
             xf[efhRAD].val   = radius(xf[efhRAD].fp2, nca, caindex, x);
-            xf[efhTWIST].val = twist(xf[efhTWIST].fp2, nca, caindex, x);
+            xf[efhTWIST].val = twist(nca, caindex, x);
             xf[efhRISE].val  = rise(nca, caindex, x);
-            xf[efhLEN].val   = ahx_len(nca, caindex, x, box);
+            xf[efhLEN].val   = ahx_len(nca, caindex, x);
             xf[efhCD222].val = ellipticity(nres, bb);
             xf[efhDIP].val   = dip(nbb, bbindex, x, top->atoms.atom);
             xf[efhRMS].val   = rms;
-            xf[efhCPHI].val  = ca_phi(nca, caindex, x, box);
+            xf[efhCPHI].val  = ca_phi(nca, caindex, x);
             xf[efhPPRMS].val = pprms(xf[efhPPRMS].fp2, nres, bb);
 
             for (j = 0; (j <= efhCPHI); j++)