"line a group of atoms to be used. For these groups matrix of",
"interaction energies will be extracted from the energy file",
"by looking for energy groups with names corresponding to pairs",
- "of groups of atoms, e.g. if your [TT]-groups[tt] file contains:[BR]",
- "[TT]2[tt][BR]",
- "[TT]Protein[tt][BR]",
- "[TT]SOL[tt][BR]",
+ "of groups of atoms, e.g. if your [TT]-groups[tt] file contains::",
+ "",
+ " 2",
+ " Protein",
+ " SOL",
+ "",
"then energy groups with names like 'Coul-SR:Protein-SOL' and ",
"'LJ:Protein-SOL' are expected in the energy file (although",
"[THISMODULE] is most useful if many groups are analyzed",