#include "gromacs/fileio/pdbio.h"
#include "gromacs/fileio/confio.h"
-#include "symtab.h"
-#include "gromacs/utility/smalloc.h"
#include "macros.h"
-#include "gromacs/commandline/pargs.h"
#include "gromacs/fileio/strdb.h"
-#include "index.h"
-#include "vec.h"
+#include "gromacs/topology/index.h"
#include "typedefs.h"
#include "gromacs/gmxlib/conformation-utilities.h"
-#include "physics.h"
-#include "atomprop.h"
+#include "gromacs/math/units.h"
#include "gromacs/fileio/tpxio.h"
#include "gromacs/fileio/trxio.h"
-#include "pbc.h"
#include "princ.h"
#include "txtdump.h"
#include "viewit.h"
-#include "rmpbc.h"
#include "gmx_ana.h"
-#include "gromacs/legacyheaders/gmx_fatal.h"
+#include "gromacs/commandline/pargs.h"
+#include "gromacs/math/vec.h"
+#include "gromacs/pbcutil/pbc.h"
+#include "gromacs/pbcutil/rmpbc.h"
+#include "gromacs/topology/atomprop.h"
+#include "gromacs/utility/fatalerror.h"
+#include "gromacs/utility/smalloc.h"
typedef struct
{