*/
#include "gmxpre.h"
-#include "config.h"
-
#include <math.h>
#include <string.h>
{ efTPS, "-f1", "conf1.gro", ffREAD },
{ efSTX, "-f2", "conf2", ffREAD },
{ efSTO, "-o", "fit.pdb", ffWRITE },
- { efNDX, "-n1", "fit1.ndx", ffOPTRD },
- { efNDX, "-n2", "fit2.ndx", ffOPTRD },
- { efNDX, "-no", "match.ndx", ffOPTWR }
+ { efNDX, "-n1", "fit1", ffOPTRD },
+ { efNDX, "-n2", "fit2", ffOPTRD },
+ { efNDX, "-no", "match", ffOPTWR }
};
#define NFILE asize(fnm)