#include "gmx_fatal.h"
#include "vec.h"
#include "pbc.h"
-#include "futil.h"
+#include "gromacs/fileio/futil.h"
#include "statutil.h"
#include "index.h"
-#include "pdbio.h"
-#include "confio.h"
-#include "tpxio.h"
-#include "matio.h"
+#include "gromacs/fileio/pdbio.h"
+#include "gromacs/fileio/confio.h"
+#include "gromacs/fileio/tpxio.h"
+#include "gromacs/fileio/trxio.h"
+#include "gromacs/fileio/matio.h"
#include "mshift.h"
#include "xvgr.h"
#include "do_fit.h"