*
* Copyright (c) 1991-2000, University of Groningen, The Netherlands.
* Copyright (c) 2001-2004, The GROMACS development team.
- * Copyright (c) 2013,2014, by the GROMACS development team, led by
+ * Copyright (c) 2013,2014,2015, by the GROMACS development team, led by
* Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
* and including many others, as listed in the AUTHORS file in the
* top-level source directory and at http://www.gromacs.org.
#ifndef GMX_FILEIO_FILENM_H
#define GMX_FILEIO_FILENM_H
-#include "../legacyheaders/types/commrec_fwd.h"
-#include "../utility/basedefinitions.h"
+#include "gromacs/legacyheaders/types/commrec_fwd.h"
+#include "gromacs/utility/basedefinitions.h"
#ifdef __cplusplus
extern "C" {
#endif
-/* this enum should correspond to the array deffile in gmxlib/filenm.c */
-enum {
+/* this enum should correspond to the array deffile in filenm.cpp */
+enum GromacsFileType {
efMDP,
- efTRX, efTRO, efTRN, efTRR, efTRJ, efCOMPRESSED, efXTC, efTNG,
+ efTRX, efTRO, efTRN, efTRR, efCOMPRESSED, efXTC, efTNG,
efEDR,
efSTX, efSTO, efGRO, efG96, efPDB, efBRK, efENT, efESP, efPQR,
efCPT,
efLOG, efXVG, efOUT,
efNDX,
efTOP, efITP,
- efTPX, efTPS, efTPR, efTPA, efTPB,
+ efTPS, efTPR,
efTEX, efRTP, efATP, efHDB,
efDAT, efDLG,
efMAP, efEPS, efMAT, efM2P,
#define ffOPT 1<<3
#define ffLIB 1<<4
#define ffMULT 1<<5
+#define ffALLOW_MISSING 1<<6
#define ffRW (ffREAD | ffWRITE)
#define ffOPTRD (ffREAD | ffOPT)
#define ffOPTWR (ffWRITE| ffOPT)
const char *ftp2defnm(int ftp);
/* Return default file name for file type */
-const char *ftp2ftype(int ftp);
-/* Return Binary or ASCII depending on file type */
+const char *ftp2defopt(int ftp);
+/* Return default option name for file type */
-void parse_file_args(int *argc, char *argv[], int nf, t_filenm fnm[],
- const char *deffnm, gmx_bool bReadNode);
-/* Parse command line for file names. When bKeep is set args are
- * not removed from argv. */
+gmx_bool ftp_is_text(int ftp);
+gmx_bool ftp_is_xdr(int ftp);
const char *opt2fn(const char *opt, int nfile, const t_filenm fnm[]);
/* Return the filename belonging to cmd-line option opt, or NULL when