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-Option Filename Type Description
----------------------------------------------------------
--f traj.xtc Input Input file description
--lib libdata.dat Input, Opt., Lib.
- Library file description
--io inout.dat In/Out, Opt. Input/Output file description
--o Output, Opt. Output file description
+SYNOPSIS
-Option Type Value Description
----------------------------------------------------
--[no]bool bool yes Boolean option
--[no]hidden bool yes Hidden option
--int int 2 Integer option
--ivec vector 1 2 3 Integer vector option
--double double 2.5 Double option
--dvec vector 1.1 2.3 3.2
- Double vector option
--time time 10 Time option (ps)
--string string test String option
--enum enum no Enum option: no, opt1, or opt2
+gmx [-f [<.xtc/.trr/...>]] [-mult [<.xtc/.trr/...> [...]]] [-lib [<.dat>]]
+ [-io [<.dat>]] [-o <.xvg>] [-[no]bool] [-[no]hidden] [-int <int>]
+ [-ivec <vector>] [-double <real>] [-dvec <vector>] [-time <time>]
+ [-string <string>] [-enum <enum>]
-Selection Description
------------------------------------
--sf Provide selections from files
--sel Selection option
+OPTIONS
+
+Options to specify input and output files:
+
+ -f [<.xtc/.trr/...>] (traj.xtc) (Input)
+ Input file description: xtc trr cpt gro g96 pdb tng
+ -mult [<.xtc/.trr/...> [...]] (traj.xtc) (Input, Opt.)
+ Multiple file description: xtc trr cpt gro g96 pdb tng
+ -lib [<.dat>] (libdata.dat) (Input, Opt., Lib.) Library file description
+ -io [<.dat>] (inout.dat) (In/Out, Opt.) Input/Output file description
+ -o <.xvg> (Output, Opt.) Output file description
+
+Other options:
+
+ -[no]bool (yes) Boolean option
+ -[no]hidden (yes) Hidden option
+ -int <int> (2) Integer option
+ -ivec <vector> (1 2 3) Integer vector option
+ -double <real> (2.5) Double option
+ -dvec <vector> (1.1 2.3 3.2) Double vector option
+ -time <time> (10) Time option (ps)
+ -string <string> (test) String option
+ -enum <enum> (no) Enum option: no, opt1, opt2
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