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/*! \internal \file
* \brief
- * Tests for functionality of gmx::AnalysisDataAverageModule
+ * Tests for functionality of analysis data averaging modules.
*
- * These tests check that gmx::AnalysisDataAverageModule computes averages
- * correctly with simple input data.
+ * These tests check that gmx::AnalysisDataAverageModule and
+ * gmx::AnalysisDataFrameAverageModule compute averages correctly with simple
+ * input data.
* Checking is done using gmx::test::AnalysisDataTestFixture and reference
* data. Also the input data is written to the reference data to catch
* out-of-date reference.
*
- * \author Teemu Murtola <teemu.murtola@cbr.su.se>
+ * \author Teemu Murtola <teemu.murtola@gmail.com>
* \ingroup module_analysisdata
*/
#include <gtest/gtest.h>
#include "gromacs/analysisdata/analysisdata.h"
#include "gromacs/analysisdata/modules/average.h"
-#include "testutils/datatest.h"
+#include "gromacs/analysisdata/tests/datatest.h"
+#include "testutils/testasserts.h"
+
+using gmx::test::AnalysisDataTestInput;
namespace
{
+// Simple input data for gmx::AnalysisDataAverageModule tests.
+class SimpleInputData
+{
+ public:
+ static const AnalysisDataTestInput &get()
+ {
+#ifndef STATIC_ANON_NAMESPACE_BUG
+ static SimpleInputData singleton;
+ return singleton.data_;
+#else
+ static SimpleInputData singleton_average;
+ return singleton_average.data_;
+#endif
+ }
+
+ SimpleInputData() : data_(1, false)
+ {
+ data_.setColumnCount(0, 3);
+ data_.addFrameWithValues(1.0, 0.0, 1.0, 2.0);
+ data_.addFrameWithValues(2.0, 1.0, 1.0, 1.0);
+ data_.addFrameWithValues(3.0, 2.0, 0.0, 0.0);
+ }
+
+ private:
+ AnalysisDataTestInput data_;
+};
+
+// Multipoint input data for gmx::AnalysisDataAverageModule tests.
+class MultipointInputData
+{
+ public:
+ static const AnalysisDataTestInput &get()
+ {
+#ifndef STATIC_ANON_NAMESPACE_BUG
+ static MultipointInputData singleton;
+ return singleton.data_;
+#else
+ static MultipointInputData singleton_average;
+ return singleton_average.data_;
+#endif
+ }
+
+ MultipointInputData() : data_(1, true)
+ {
+ using gmx::test::AnalysisDataTestInputFrame;
+ data_.setColumnCount(0, 3);
+ AnalysisDataTestInputFrame &frame1 = data_.addFrame(1.0);
+ frame1.addPointSetWithValues(0, 0, 0.0, 1.0, 2.0);
+ frame1.addPointSetWithValues(0, 0, 1.0, 0.0);
+ frame1.addPointSetWithValues(0, 0, 2.0);
+ AnalysisDataTestInputFrame &frame2 = data_.addFrame(2.0);
+ frame2.addPointSetWithValues(0, 0, 1.0, 1.0);
+ frame2.addPointSetWithValues(0, 0, 2.0);
+ AnalysisDataTestInputFrame &frame3 = data_.addFrame(3.0);
+ frame3.addPointSetWithValues(0, 0, 2.0, 0.0, 0.0);
+ }
+
+ private:
+ AnalysisDataTestInput data_;
+};
+
+// Input data with multiple data sets for gmx::AnalysisDataAverageModule tests.
+class MultiDataSetInputData
+{
+ public:
+ static const AnalysisDataTestInput &get()
+ {
+#ifndef STATIC_ANON_NAMESPACE_BUG
+ static MultiDataSetInputData singleton;
+ return singleton.data_;
+#else
+ static MultiDataSetInputData singleton_average;
+ return singleton_average.data_;
+#endif
+ }
+
+ MultiDataSetInputData() : data_(2, true)
+ {
+ using gmx::test::AnalysisDataTestInputFrame;
+ data_.setColumnCount(0, 3);
+ data_.setColumnCount(1, 2);
+ AnalysisDataTestInputFrame &frame1 = data_.addFrame(1.0);
+ frame1.addPointSetWithValues(0, 0, 0.0, 1.0, 2.0);
+ frame1.addPointSetWithValues(0, 0, 1.0, 0.0);
+ frame1.addPointSetWithValues(1, 0, 2.0, 1.0);
+ frame1.addPointSetWithValues(1, 1, 2.0);
+ AnalysisDataTestInputFrame &frame2 = data_.addFrame(2.0);
+ frame2.addPointSetWithValues(0, 0, 1.0, 1.0);
+ frame2.addPointSetWithValues(0, 2, 2.0);
+ frame2.addPointSetWithValues(1, 0, 1.0, 0.0);
+ AnalysisDataTestInputFrame &frame3 = data_.addFrame(3.0);
+ frame3.addPointSetWithValues(0, 0, 2.0, 0.0, 0.0);
+ frame3.addPointSetWithValues(1, 0, 0.0, 2.0);
+ }
+
+ private:
+ AnalysisDataTestInput data_;
+};
+
+
/********************************************************************
* Tests for gmx::AnalysisDataAverageModule.
*/
+//! Test fixture for gmx::AnalysisDataAverageModule.
typedef gmx::test::AnalysisDataTestFixture AverageModuleTest;
-// Input data for the tests below.
-using gmx::test::END_OF_DATA;
-using gmx::test::END_OF_FRAME;
-static const real inputdata[] = {
- 1.0, 0.0, 1.0, 2.0, END_OF_FRAME,
- 2.0, 1.0, 1.0, 1.0, END_OF_FRAME,
- 3.0, 2.0, 0.0, 0.0, END_OF_FRAME,
- END_OF_DATA
-};
-
TEST_F(AverageModuleTest, BasicTest)
{
- gmx::test::AnalysisDataTestInput input(inputdata);
- gmx::AnalysisData data;
- data.setColumnCount(input.columnCount());
+ const AnalysisDataTestInput &input = SimpleInputData::get();
+ gmx::AnalysisData data;
+ ASSERT_NO_THROW_GMX(setupDataObject(input, &data));
+
+ gmx::AnalysisDataAverageModulePointer module(
+ new gmx::AnalysisDataAverageModule);
+ data.addModule(module);
+
+ ASSERT_NO_THROW_GMX(addStaticCheckerModule(input, &data));
+ ASSERT_NO_THROW_GMX(addReferenceCheckerModule("InputData", &data));
+ ASSERT_NO_THROW_GMX(addReferenceCheckerModule("Average", module.get()));
+ ASSERT_NO_THROW_GMX(presentAllData(input, &data));
+}
+
+TEST_F(AverageModuleTest, HandlesMultipointData)
+{
+ const AnalysisDataTestInput &input = MultipointInputData::get();
+ gmx::AnalysisData data;
+ ASSERT_NO_THROW_GMX(setupDataObject(input, &data));
+
gmx::AnalysisDataAverageModulePointer module(
new gmx::AnalysisDataAverageModule);
data.addModule(module);
- ASSERT_NO_THROW(addStaticCheckerModule(input, &data));
- ASSERT_NO_THROW(addReferenceCheckerModule("InputData", &data));
- ASSERT_NO_THROW(addReferenceCheckerModule("Average", module.get()));
- ASSERT_NO_THROW(presentAllData(input, &data));
+ ASSERT_NO_THROW_GMX(addStaticCheckerModule(input, &data));
+ ASSERT_NO_THROW_GMX(addReferenceCheckerModule("InputData", &data));
+ ASSERT_NO_THROW_GMX(addReferenceCheckerModule("Average", module.get()));
+ ASSERT_NO_THROW_GMX(presentAllData(input, &data));
+}
+
+TEST_F(AverageModuleTest, HandlesMultipleDataSets)
+{
+ const AnalysisDataTestInput &input = MultiDataSetInputData::get();
+ gmx::AnalysisData data;
+ ASSERT_NO_THROW_GMX(setupDataObject(input, &data));
+
+ gmx::AnalysisDataAverageModulePointer module(
+ new gmx::AnalysisDataAverageModule);
+ data.addModule(module);
+
+ ASSERT_NO_THROW_GMX(addStaticCheckerModule(input, &data));
+ ASSERT_NO_THROW_GMX(addReferenceCheckerModule("InputData", &data));
+ ASSERT_NO_THROW_GMX(addReferenceCheckerModule("Average", module.get()));
+ ASSERT_NO_THROW_GMX(presentAllData(input, &data));
+}
+
+TEST_F(AverageModuleTest, HandlesDataSetAveraging)
+{
+ const AnalysisDataTestInput &input = MultiDataSetInputData::get();
+ gmx::AnalysisData data;
+ ASSERT_NO_THROW_GMX(setupDataObject(input, &data));
+
+ gmx::AnalysisDataAverageModulePointer module(
+ new gmx::AnalysisDataAverageModule);
+ module->setAverageDataSets(true);
+ data.addModule(module);
+
+ ASSERT_NO_THROW_GMX(addStaticCheckerModule(input, &data));
+ ASSERT_NO_THROW_GMX(addReferenceCheckerModule("InputData", &data));
+ ASSERT_NO_THROW_GMX(addReferenceCheckerModule("Average", module.get()));
+ ASSERT_NO_THROW_GMX(presentAllData(input, &data));
}
TEST_F(AverageModuleTest, CanCustomizeXAxis)
{
- gmx::test::AnalysisDataTestInput input(inputdata);
- gmx::AnalysisData data;
- data.setColumnCount(input.columnCount());
+ const AnalysisDataTestInput &input = SimpleInputData::get();
+ gmx::AnalysisData data;
+ ASSERT_NO_THROW_GMX(setupDataObject(input, &data));
+
gmx::AnalysisDataAverageModulePointer module(new gmx::AnalysisDataAverageModule());
data.addModule(module);
module->setXAxis(0.5, 0.5);
- ASSERT_NO_THROW(addStaticCheckerModule(input, &data));
- ASSERT_NO_THROW(addReferenceCheckerModule("InputData", &data));
- ASSERT_NO_THROW(addReferenceCheckerModule("Average", module.get()));
- ASSERT_NO_THROW(presentAllData(input, &data));
+ ASSERT_NO_THROW_GMX(addStaticCheckerModule(input, &data));
+ ASSERT_NO_THROW_GMX(addReferenceCheckerModule("InputData", &data));
+ ASSERT_NO_THROW_GMX(addReferenceCheckerModule("Average", module.get()));
+ ASSERT_NO_THROW_GMX(presentAllData(input, &data));
+}
+
+TEST_F(AverageModuleTest, CanCustomizeNonUniformXAxis)
+{
+ const AnalysisDataTestInput &input = SimpleInputData::get();
+ gmx::AnalysisData data;
+ ASSERT_NO_THROW_GMX(setupDataObject(input, &data));
+
+ gmx::AnalysisDataAverageModulePointer module(new gmx::AnalysisDataAverageModule());
+ data.addModule(module);
+ module->setXAxisValue(0, 2.0);
+ module->setXAxisValue(1, 3.0);
+ module->setXAxisValue(2, 5.0);
+
+ ASSERT_NO_THROW_GMX(addStaticCheckerModule(input, &data));
+ ASSERT_NO_THROW_GMX(addReferenceCheckerModule("InputData", &data));
+ ASSERT_NO_THROW_GMX(addReferenceCheckerModule("Average", module.get()));
+ ASSERT_NO_THROW_GMX(presentAllData(input, &data));
+}
+
+/********************************************************************
+ * Tests for gmx::AnalysisDataFrameAverageModule.
+ */
+
+//! Test fixture for gmx::AnalysisDataFrameAverageModule.
+typedef gmx::test::AnalysisDataTestFixture FrameAverageModuleTest;
+
+TEST_F(FrameAverageModuleTest, BasicTest)
+{
+ const AnalysisDataTestInput &input = SimpleInputData::get();
+ gmx::AnalysisData data;
+ ASSERT_NO_THROW_GMX(setupDataObject(input, &data));
+
+ gmx::AnalysisDataFrameAverageModulePointer module(
+ new gmx::AnalysisDataFrameAverageModule);
+ data.addModule(module);
+
+ ASSERT_NO_THROW_GMX(addStaticCheckerModule(input, &data));
+ ASSERT_NO_THROW_GMX(addReferenceCheckerModule("InputData", &data));
+ ASSERT_NO_THROW_GMX(addReferenceCheckerModule("FrameAverage", module.get()));
+ ASSERT_NO_THROW_GMX(presentAllData(input, &data));
+}
+
+TEST_F(FrameAverageModuleTest, HandlesMultipleDataSets)
+{
+ const AnalysisDataTestInput &input = MultiDataSetInputData::get();
+ gmx::AnalysisData data;
+ ASSERT_NO_THROW_GMX(setupDataObject(input, &data));
+
+ gmx::AnalysisDataFrameAverageModulePointer module(
+ new gmx::AnalysisDataFrameAverageModule);
+ data.addModule(module);
+
+ ASSERT_NO_THROW_GMX(addStaticCheckerModule(input, &data));
+ ASSERT_NO_THROW_GMX(addReferenceCheckerModule("InputData", &data));
+ ASSERT_NO_THROW_GMX(addReferenceCheckerModule("FrameAverage", module.get()));
+ ASSERT_NO_THROW_GMX(presentAllData(input, &data));
}
} // namespace