/*
* This file is part of the GROMACS molecular simulation package.
*
- * Copyright (c) 2010,2011,2012,2013, by the GROMACS development team, led by
+ * Copyright (c) 2010,2011,2012,2013,2014, by the GROMACS development team, led by
* Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
* and including many others, as listed in the AUTHORS file in the
* top-level source directory and at http://www.gromacs.org.
#ifndef GMX_ANALYSISDATA_MODULES_HISTOGRAM_H
#define GMX_ANALYSISDATA_MODULES_HISTOGRAM_H
-#include "../abstractdata.h"
-#include "../arraydata.h"
-#include "../datamodule.h"
-#include "../../utility/uniqueptr.h"
+#include <boost/shared_ptr.hpp>
+
+#include "gromacs/analysisdata/abstractdata.h"
+#include "gromacs/analysisdata/arraydata.h"
+#include "gromacs/analysisdata/datamodule.h"
namespace gmx
{
};
-namespace internal
-{
-
-class BasicHistogramImpl;
-
-} // namespace internal
-
class AbstractAverageHistogram;
//! Smart pointer to manage an AbstractAverageHistogram object.
-typedef gmx_unique_ptr<AbstractAverageHistogram>::type
+typedef boost::shared_ptr<AbstractAverageHistogram>
AverageHistogramPointer;
/*! \brief
* The number of columns for all data sets equals the number of bins in the
* histogram.
*
+ * The histograms are accumulated as 64-bit integers within a frame and summed
+ * in double precision across frames, even if the output data is in single
+ * precision.
+ *
* \inpublicapi
* \ingroup module_analysisdata
*/
virtual AnalysisDataFrameRef tryGetDataFrameInternal(int index) const;
virtual bool requestStorageInternal(int nframes);
- PrivateImplPointer<internal::BasicHistogramImpl> impl_;
+ class Impl;
+
+ PrivateImplPointer<Impl> impl_;
// Copy and assign disallowed by base.
};
* The number of columns for all data sets equals the number of bins in the
* histogram.
*
+ * The histograms are accumulated in double precision, even if the output data
+ * is in single precision.
+ *
* \inpublicapi
* \ingroup module_analysisdata
*/
virtual AnalysisDataFrameRef tryGetDataFrameInternal(int index) const;
virtual bool requestStorageInternal(int nframes);
- PrivateImplPointer<internal::BasicHistogramImpl> impl_;
+ class Impl;
+
+ PrivateImplPointer<Impl> impl_;
// Copy and assign disallowed by base.
};