-.TH genbox 1 "Mon 4 Apr 2011" "" "GROMACS suite, VERSION 4.5.4-dev-20110404-bc5695c"
+.TH genbox 1 "Fri 18 Jan 2013" "" "GROMACS suite, VERSION 4.5.6"
.SH NAME
genbox - solvates a system
-.B VERSION 4.5.4-dev-20110404-bc5695c
+.B VERSION 4.5.6
.SH SYNOPSIS
\f3genbox\fP
.BI "\-cp" " protein.gro "
Set the nicelevel
.BI "\-box" " vector" " 0 0 0"
- box size
+ Box size
.BI "\-nmol" " int" " 0"
- no of extra molecules to insert
+ Number of extra molecules to insert
.BI "\-try" " int" " 10"
- try inserting \fB \-nmol\fR times \fB \-try\fR times
+ Try inserting \fB \-nmol\fR times \fB \-try\fR times
.BI "\-seed" " int" " 1997"
- random generator seed
+ Random generator seed
.BI "\-vdwd" " real" " 0.105 "
- default vdwaals distance
+ Default van der Waals distance
.BI "\-shell" " real" " 0 "
- thickness of optional water layer around solute
+ Thickness of optional water layer around solute
.BI "\-maxsol" " int" " 0"
- maximum number of solvent molecules to add if they fit in the box. If zero (default) this is ignored
+ Maximum number of solvent molecules to add if they fit in the box. If zero (default) this is ignored
.BI "\-[no]vel" "no "
- keep velocities from input solute and solvent
+ Keep velocities from input solute and solvent
.SH KNOWN PROBLEMS
\- Molecules must be whole in the initial configurations.