void ana_dih_trans(const char *fn_trans,const char *fn_histo,
real **dih,int nframes,int nangles,
- const char *grpname,real t0,real dt,gmx_bool bRb,
+ const char *grpname,real *time,gmx_bool bRb,
const output_env_t oenv);
/*
* Analyse dihedral transitions, by counting transitions per dihedral
* nframes number of times frames
* nangles number of angles
* grpname a string for the header of plots
- * t0,dt starting time resp. time between time frames
+ * time array (size nframes) of times of trajectory frames
* bRb determines whether the polymer convention is used
* (trans = 0)
*/
gmx_bool bHisto, const char *fn_histo, int maxchi,
real **dih, int nlist, t_dlist dlist[],
int nframes, int nangles, const char *grpname,
- int multiplicity[], real t0, real dt, gmx_bool bRb,
+ int multiplicity[], real *time, gmx_bool bRb,
real core_frac, const output_env_t oenv);
/* as above but passes dlist so can copy occupancies into it, and multiplicity[]
* (1..nangles, corresp to dih[this][], so can have non-3 multiplicity of