Implement user guide

[alexxy/gromacs.git] / docs / user-guide / CMakeLists.txt

diff --git a/docs/user-guide/CMakeLists.txt b/docs/user-guide/CMakeLists.txt
index 28477eb16862e23d3ddeb296c11ba8e5735dd529..c48caeebfdc1748cca6117a59492bf0ecb9f4b10 100644 (file)
--- a/docs/user-guide/CMakeLists.txt
+++ b/docs/user-guide/CMakeLists.txt
@@ -1,7 +1,7 @@
 #
 # This file is part of the GROMACS molecular simulation package.
 #
-# Copyright (c) 2014, by the GROMACS development team, led by
+# Copyright (c) 2014,2015, by the GROMACS development team, led by
 # Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
 # and including many others, as listed in the AUTHORS file in the
 # top-level source directory and at http://www.gromacs.org.
@@ -37,8 +37,26 @@
 if(MARKDOWN_CONFIGURE_IS_POSSIBLE AND PANDOC_EXECUTABLE)
     set(name "user-guide")
     configure_markdown(main.md)
-    make_markdown_html(${name} ${CMAKE_CURRENT_BINARY_DIR}/main.md)
-    make_markdown_pdf(${name} ${CMAKE_CURRENT_BINARY_DIR}/main.md)
+    configure_markdown(references.md)
+
+    # TODO The concatenation of the markdown into a single document on
+    # the pandoc command line generated by CMake is not pretty, but
+    # there's no standard native include-file mechanism in
+    # Markdown. We should resolve this when we agree on a final
+    # generation platform.
+    list(APPEND list_of_markdown_files
+        ${CMAKE_CURRENT_SOURCE_DIR}/getting-started.md
+        ${CMAKE_CURRENT_SOURCE_DIR}/tools.md
+        ${CMAKE_CURRENT_SOURCE_DIR}/mdp-options.md
+        ${CMAKE_CURRENT_SOURCE_DIR}/cutoff-schemes.md
+        ${CMAKE_CURRENT_SOURCE_DIR}/mdrun-features.md
+        ${CMAKE_CURRENT_SOURCE_DIR}/mdrun-performance.md
+        ${CMAKE_CURRENT_SOURCE_DIR}/file-formats.md
+        ${CMAKE_CURRENT_SOURCE_DIR}/environment-variables.md
+        )
+
+    make_markdown_html(${name} ${CMAKE_CURRENT_BINARY_DIR}/main.md ${list_of_markdown_files} ${CMAKE_CURRENT_BINARY_DIR}/references.md)
+    make_markdown_pdf(${name} ${CMAKE_CURRENT_BINARY_DIR}/main.md ${list_of_markdown_files} ${CMAKE_CURRENT_BINARY_DIR}/references.md)
 
     # Add a top-level target for the webpage build to hook onto
     add_custom_target(${name}