Valgrind suppression for OS X 10.9

[alexxy/gromacs.git] / cmake / legacy_and_external.supp

diff --git a/cmake/legacy_and_external.supp b/cmake/legacy_and_external.supp
index 07607b891b890a440f286af249b15382604ac993..0e84ddeabacfda268e761e70646f004fa45d0cd7 100644 (file)
--- a/cmake/legacy_and_external.supp
+++ b/cmake/legacy_and_external.supp
@@ -3,6 +3,25 @@
 # Memory leaks in the legacy code are excluded
 # Other problems besides memory leaks should NOT be excluded for legacy code
 
+# Ugly memory leak that depends on global variables being used to pass
+# information between routines.
+{
+   nsc_dclm_pbc
+   Memcheck:Leak
+   fun:calloc
+   fun:save_calloc
+   fun:ico_dot_dod
+   fun:make_unsp
+   fun:nsc_dclm_pbc
+}
+
+{
+   ctime_r
+   Memcheck:Leak
+   ...
+   fun:ctime_r
+}
+
 {
    libz
    Memcheck:Cond
@@ -10,11 +29,75 @@
    fun:inflateInit2_
 }
 
+# OpenMPI
 {
-   read_tps_conf
+   MPI_Init/Leak
    Memcheck:Leak
    ...
-   fun:read_tps_conf
+   fun:PMPI_Init
+}
+{
+   MPI_Finalize/Leak
+   Memcheck:Leak
+   fun:malloc
+   fun:ompi_proc_all
+   ...
+   fun:_ZN3gmx8finalizeEv
+}
+{
+   MPI_Init/Addr4
+   Memcheck:Addr4
+   ...
+   fun:PMPI_Init
+}
+{
+   MPI_Init/Addr8
+   Memcheck:Addr8
+   ...
+   fun:PMPI_Init
+}
+{
+   MPI_Init/sched_setaffinity
+   Memcheck:Param
+   sched_setaffinity(mask)
+   ...
+   fun:PMPI_Init
+}
+{
+   MPI_Init/writev
+   Memcheck:Param
+   writev(vector[...])
+   ...
+   fun:PMPI_Init
+}
+
+{
+   gmx_fio_fopen
+   Memcheck:Leak
+   ...
+   fun:gmx_fio_fopen
+}
+{
+   new_symbuf
+   Memcheck:Leak
+   ...
+   fun:new_symbuf
+}
+{
+   bTimeSet/tMPI_Thread_mutex_init_once
+   Memcheck:Leak
+   ...
+   fun:tMPI_Thread_mutex_init_once
+   fun:tMPI_Thread_mutex_lock
+   fun:bTimeSet
+}
+{
+   gmx_ffclose/tMPI_Thread_mutex_init_once
+   Memcheck:Leak
+   ...
+   fun:tMPI_Thread_mutex_init_once
+   fun:tMPI_Thread_mutex_lock
+   fun:gmx_ffclose
 }
 
 {
@@ -23,3 +106,169 @@
    ...
    obj:*/mdrun*
 }
+
+{
+   strdup/strtod
+   Memcheck:Addr8
+   fun:__GI___strncasecmp_l
+   fun:____strtod_l_internal
+}
+
+
+#MacOS rules
+{
+   dyld_register_image_state_change_handler
+   Memcheck:Leak
+   fun:malloc
+   fun:malloc
+   ...
+   fun:dyld_register_image_state_change_handler
+}
+
+{
+   __emutls_get_address
+   Memcheck:Leak
+   ...
+   fun:__emutls_get_address
+}
+
+{
+   libSystem_initializer
+   Memcheck:Leak
+   ...
+   fun:libSystem_initializer
+}
+
+{
+   atexit
+   Memcheck:Leak
+   fun:malloc
+   fun:atexit_register
+}
+
+{
+   unw_set_reg
+   Memcheck:Leak
+   ...
+   fun:unw_set_reg
+   fun:__gxx_personality_v0
+}
+
+{
+   printf
+   Memcheck:Leak
+   fun:malloc
+   ...
+   fun:__vfprintf
+}
+
+{
+   printf
+   Memcheck:Leak
+   fun:malloc
+   ...
+   fun:vfprintf_l
+}
+
+{
+   strtof
+   Memcheck:Leak
+   fun:malloc
+   ...
+   fun:strtof_l
+}
+{
+   strtod
+   Memcheck:Leak
+   fun:malloc
+   ...
+   fun:strtod_l
+}
+
+{
+   scanf
+   Memcheck:Leak
+   ...
+   fun:__svfscanf_l
+}
+
+{
+    localtime
+    Memcheck:Leak
+    ...
+    fun:localtime
+}
+
+{
+   __cxa_get_globals
+   Memcheck:Leak
+   fun:malloc
+   fun:__cxa_get_globals
+}
+{
+   __cxa_get_globals
+   Memcheck:Leak
+   fun:calloc
+   fun:__cxa_get_globals
+   fun:__cxa_throw
+}
+
+{
+   _Unwind_RaiseException
+   Memcheck:Leak
+   fun:malloc
+   ...
+   fun:_Unwind_RaiseException
+   fun:__cxa_throw
+}
+{
+   posix_memalign
+   Memcheck:Leak
+   ...
+   fun:posix_memalign
+}
+
+# Intel compiler on MacOS
+{
+   __cilkrts_os_mutex_create
+   Memcheck:Leak
+   fun:malloc
+   fun:__cilkrts_os_mutex_create
+}
+# Intel compiler with MKL
+{
+   dlerror
+   Memcheck:Leak
+   ...
+   fun:_dlerror_run
+}
+#Intel
+{
+   strlen
+   Memcheck:Addr8
+   fun:__intel_sse2_strlen
+}
+{
+   strlen2
+   Memcheck:Cond
+   fun:__intel_sse2_strlen
+}
+{
+   __kmpc_global_thread_num
+   Memcheck:Param
+   sched_setaffinity(mask)
+   ...
+   fun:__kmpc_global_thread_num
+}
+{
+   __kmpc_global_thread_num2
+   Memcheck:Cond
+   ...
+   fun:__kmpc_global_thread_num
+}
+{
+   __kmpc_global_thread_num3
+   Memcheck:Leak
+   ...
+   fun:__kmpc_global_thread_num
+}