# Build documentation and web page.
.docs:configure:
- # Built by admin/dockerfiles/ci-docs-clang
- # TODO this should be organized more like the current documentation.py script
- image: gromacs/ci-docs-clang:master
- stage: configure-build
extends:
- - .gromacs:base:configure
- .variables:default
+ - .gromacs:base:configure
- .before_script:default
- only:
- refs:
- - web
- - pushes
- - schedules
- - merge_requests
+ # TODO (#3480) this should be organized more like the current documentation.py script
+ image: ${CI_REGISTRY}/gromacs/gromacs/ci-ubuntu-20.04-llvm-7-docs
+ stage: configure-build
+ cache: {}
variables:
KUBERNETES_CPU_LIMIT: 1
KUBERNETES_CPU_REQUEST: 1
- KUBERNETES_MEMORY_LIMIT: 2Gi
+ KUBERNETES_MEMORY_REQUEST: 2Gi
CMAKE_COMPILER_SCRIPT: "-DCMAKE_C_COMPILER=clang-7 -DCMAKE_CXX_COMPILER=clang++-7"
- CMAKE_EXTRA_OPTIONS: ""
CMAKE_SIMD_OPTIONS: "-DGMX_SIMD=None"
CMAKE_MPI_OPTIONS: "-DGMX_THREAD_MPI=OFF"
CMAKE_PRECISION_OPTIONS: "-DGMX_DOUBLE=OFF"
CMAKE_BUILD_TYPE_OPTIONS: "-DCMAKE_BUILD_TYPE=Debug"
CMAKE_GPU_OPTIONS: "-DGMX_GPU=OFF"
+ CMAKE_GMXAPI_OPTIONS: "-DGMX_PYTHON_PACKAGE=ON"
script:
- if [[ ! -z $GROMACS_RELEASE && $GROMACS_RELEASE == "true" ]] ; then
REL_OPTION="-DGMX_BUILD_TARBALL=ON" ;
mkdir $BUILD_DIR ;
fi
- cd $BUILD_DIR
+ # Running CMake with the venv activated should not be strictly necessary,
+ # but helps to find and cache self-consistent Python and Sphinx details
+ # without additional hinting. Once CMakeCache.txt exists, the later stages
+ # should work fine without reactivating the venv.
+ - source /root/venv/py3.7/bin/activate
+ # TODO(#4092) Remove `pip install pybind11` once CI images are updated.
+ - /root/venv/py3.7/bin/pip install pybind11
- cmake ..
-DCMAKE_C_COMPILER_LAUNCHER=ccache -DCMAKE_CXX_COMPILER_LAUNCHER=ccache
$CMAKE_COMPILER_SCRIPT
- $BUILD_DIR
.docs:configure:release:
- # Built by admin/dockerfiles/ci-docs-clang
- # TODO this should be organized more like the current documentation.py script
- image: gromacs/ci-docs-clang:master
- stage: release-configure
extends:
- - .gromacs:base:configure
- .variables:default
+ - .gromacs:base:configure
- .before_script:default
+ - .rules:nightly-only-for-release
+ # TODO (#3480) this should be organized more like the current documentation.py script
+ image: ${CI_REGISTRY}/gromacs/gromacs/ci-ubuntu-20.04-llvm-7-docs
+ stage: release-configure
cache: {}
variables:
KUBERNETES_CPU_LIMIT: 1
KUBERNETES_CPU_REQUEST: 1
- KUBERNETES_MEMORY_LIMIT: 2Gi
+ KUBERNETES_MEMORY_REQUEST: 2Gi
CMAKE_COMPILER_SCRIPT: "-DCMAKE_C_COMPILER=clang-7 -DCMAKE_CXX_COMPILER=clang++-7"
- CMAKE_EXTRA_OPTIONS: ""
CMAKE_SIMD_OPTIONS: "-DGMX_SIMD=None"
CMAKE_MPI_OPTIONS: "-DGMX_THREAD_MPI=ON"
CMAKE_PRECISION_OPTIONS: "-DGMX_DOUBLE=OFF"
CMAKE_BUILD_TYPE_OPTIONS: "-DCMAKE_BUILD_TYPE=Debug"
CMAKE_GPU_OPTIONS: "-DGMX_GPU=OFF"
+ CMAKE_GMXAPI_OPTIONS: "-DGMX_PYTHON_PACKAGE=ON"
RELEASE_BUILD_DIR: release-doc-builds
RELEASE_SOURCE: release-source-from-tarball
RELEASE_REGRESSIONTESTS: release-regressiontests-from-tarball
-
- only:
- refs:
- - web
- - schedules
- - triggers
- variables:
- - $GROMACS_RELEASE
script:
- if [[ $GROMACS_RELEASE == "true" ]] ; then
REL_OPTION="-DGMX_BUILD_TARBALL=ON" ;
mkdir $RELEASE_BUILD_DIR ;
fi
- cd $RELEASE_BUILD_DIR
+ - source /root/venv/py3.7/bin/activate
+ # TODO(#4092) Remove `pip install pybind11` once CI images are updated.
+ - /root/venv/py3.7/bin/pip install pybind11
- cmake ../$RELEASE_SOURCE/
-DCMAKE_C_COMPILER_LAUNCHER=ccache -DCMAKE_CXX_COMPILER_LAUNCHER=ccache
$CMAKE_COMPILER_SCRIPT
docs:configure:
extends:
- .docs:configure
- needs:
- - job: simple-build
- artifacts: false
+ - .rules:basic-push
variables:
BUILD_DIR: build-docs
- CMAKE_EXTRA_OPTIONS: -DGMX_BUILD_HELP=on -DGMX_BUILD_MANUAL=on
- except:
- variables:
- - $GROMACS_RELEASE
+ CMAKE_EXTRA_OPTIONS: -DGMX_BUILD_HELP=on -DGMX_BUILD_MANUAL=on -DGMX_USE_SIMD_KERNELS=off
.docs:build:
- # Built by admin/dockerfiles/ci-docs-clang
- # TODO this should be organized more like the current documentation.py script
- image: gromacs/ci-docs-clang:master
- only:
- refs:
- - web
- - pushes
- - schedules
- - merge_requests
+ # TODO (#3480) this should be organized more like the current documentation.py script
+ image: ${CI_REGISTRY}/gromacs/gromacs/ci-ubuntu-20.04-llvm-7-docs
script:
- cd $BUILD_DIR
+ # TODO(#4092) Remove `pip install pybind11` once CI images are updated.
+ - /root/venv/py3.7/bin/pip install pybind11
- cmake --build . --target gmx -- -j8
- cd ..
artifacts:
docs:build:
extends:
- - .gromacs:base:build
- .variables:default
+ - .gromacs:base:build
- .use-ccache
- .docs:build
- .before_script:default
+ - .rules:basic-push
stage: documentation
needs:
- - job: simple-build
- artifacts: false
- job: docs:configure
- artifacts: true
variables:
BUILD_DIR: build-docs
- except:
- variables:
- - $GROMACS_RELEASE
# The manual build is built separately so that errors in converting
# Sphinx to LaTeX and compiling can always be found in the
# TODO use a feature from gitlab runner instead of using pipefail to get timings for the job
.webpage:build:
extends:
- - .gromacs:base:build
- .variables:default
+ - .gromacs:base:build
- .before_script:default
- # Built by admin/dockerfiles/ci-docs-clang
- # TODO this should be organized more like the current documentation.py script
- image: gromacs/ci-docs-clang:master
- only:
- refs:
- - web
- - pushes
- - schedules
- - merge_requests
+ # TODO (#3480) this should be organized more like the current documentation.py script
+ image: ${CI_REGISTRY}/gromacs/gromacs/ci-ubuntu-20.04-llvm-7-docs
+ cache: {}
variables:
KUBERNETES_CPU_LIMIT: 4
KUBERNETES_CPU_REQUEST: 2
- KUBERNETES_MEMORY_LIMIT: 4Gi
+ KUBERNETES_MEMORY_REQUEST: 4Gi
script:
- cd $BUILD_DIR
- cmake --build . --target manual -- -j4 | tee docs/manual/all-output.log
| grep -i "warning" | grep -v "TeX" | grep -v "Package" || true
+ # TODO(#4092) Remove `pip install pybind11` once CI images are updated.
+ - /root/venv/py3.7/bin/pip install pybind11
- cmake --build . --target webpage -- -j4
- grep "WARNING:" docs/manual/all-output.log | tee pythonErrors.log || true
- grep -i "error" docs/sphinx-*.log | tee sphinxDiagnostics.log || true
webpage:build:
extends:
- .webpage:build
+ - .rules:basic-push
stage: post-test
needs:
- job: docs:build
- artifacts: true
- job: check-source
artifacts: false
variables:
BUILD_DIR: build-docs
- except:
- variables:
- - $GROMACS_RELEASE
webpage:configure:
extends:
- .docs:configure:release
+ - .rules:nightly-only-for-release
cache: {}
- only:
- refs:
- - web
- - schedules
- - triggers
- variables:
- - $GROMACS_RELEASE
+ tags:
+ - k8s-scilifelab
dependencies:
- archive:package
- regressiontests:package
- prepare-release-version
variables:
- CMAKE_EXTRA_OPTIONS: -DGMX_BUILD_HELP=on -DGMX_BUILD_MANUAL=on
+ CMAKE_EXTRA_OPTIONS: -DGMX_BUILD_HELP=on -DGMX_BUILD_MANUAL=on -DGMX_USE_SIMD_KERNELS=off
webpage:dependencies:
- .use-ccache
- .docs:build
- .before_script:default
+ - .rules:nightly-only-for-release
stage: release-build
+ tags:
+ - k8s-scilifelab
needs:
- job: webpage:configure
- artifacts: true
variables:
BUILD_DIR: release-doc-builds
- only:
- refs:
- - triggers
- - web
- - schedules
- variables:
- - $GROMACS_RELEASE
webpage:build:release:
extends:
- .webpage:build
+ - .rules:nightly-only-for-release
+ stage: release-prepare-deploy
+ tags:
+ - k8s-scilifelab
dependencies:
- webpage:dependencies
- webpage:configure
- stage: release-prepare-deploy
- only:
- refs:
- - web
- - schedules
- - triggers
- variables:
- - $GROMACS_RELEASE
variables:
BUILD_DIR: release-doc-builds
biod.pnpi.spb.ru / alexxy / gromacs.git / blobdiff