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37 * Implements classes in datatest.h.
39 * \author Teemu Murtola <teemu.murtola@gmail.com>
40 * \ingroup module_testutils
44 #include <gmock/gmock.h>
45 #include <gtest/gtest.h>
47 #include "gromacs/analysisdata/analysisdata.h"
48 #include "gromacs/analysisdata/paralleloptions.h"
49 #include "gromacs/utility/gmxassert.h"
50 #include "gromacs/utility/stringutil.h"
52 #include "testutils/mock_datamodule.h"
53 #include "testutils/refdata.h"
61 /********************************************************************
62 * AnalysisDataTestInputPointSet
65 AnalysisDataTestInputPointSet::AnalysisDataTestInputPointSet(
66 int index, int dataSetIndex, int firstColumn)
67 : index_(index), dataSetIndex_(dataSetIndex), firstColumn_(firstColumn)
72 /********************************************************************
73 * AnalysisDataTestInputFrame
76 AnalysisDataTestInputFrame::AnalysisDataTestInputFrame(int index, real x)
77 : index_(index), x_(x)
81 AnalysisDataTestInputPointSet &
82 AnalysisDataTestInputFrame::addPointSet(int dataSet, int firstColumn)
85 AnalysisDataTestInputPointSet(pointSets_.size(),
86 dataSet, firstColumn));
87 return pointSets_.back();
90 void AnalysisDataTestInputFrame::addPointSetWithValues(
91 int dataSet, int firstColumn, real y1)
93 AnalysisDataTestInputPointSet &pointSet = addPointSet(dataSet, firstColumn);
94 pointSet.addValue(y1);
97 void AnalysisDataTestInputFrame::addPointSetWithValues(
98 int dataSet, int firstColumn, real y1, real y2)
100 AnalysisDataTestInputPointSet &pointSet = addPointSet(dataSet, firstColumn);
101 pointSet.addValue(y1);
102 pointSet.addValue(y2);
105 void AnalysisDataTestInputFrame::addPointSetWithValues(
106 int dataSet, int firstColumn, real y1, real y2, real y3)
108 AnalysisDataTestInputPointSet &pointSet = addPointSet(dataSet, firstColumn);
109 pointSet.addValue(y1);
110 pointSet.addValue(y2);
111 pointSet.addValue(y3);
114 void AnalysisDataTestInputFrame::addPointSetWithValueAndError(
115 int dataSet, int firstColumn, real y1, real e1)
117 AnalysisDataTestInputPointSet &pointSet = addPointSet(dataSet, firstColumn);
118 pointSet.addValueWithError(y1, e1);
122 /********************************************************************
123 * AnalysisDataTestInput
126 AnalysisDataTestInput::AnalysisDataTestInput(int dataSetCount, bool bMultipoint)
127 : columnCounts_(dataSetCount), bMultipoint_(bMultipoint)
132 AnalysisDataTestInput::~AnalysisDataTestInput()
137 const AnalysisDataTestInputFrame &AnalysisDataTestInput::frame(int index) const
139 GMX_RELEASE_ASSERT(index >= 0 && index < frameCount(),
140 "Out-of-range frame index");
141 return frames_[index];
145 void AnalysisDataTestInput::setColumnCount(int dataSet, int columnCount)
147 GMX_RELEASE_ASSERT(dataSet >= 0 && dataSet < dataSetCount(),
148 "Out-of-range data set index");
149 columnCounts_[dataSet] = columnCount;
153 AnalysisDataTestInputFrame &AnalysisDataTestInput::addFrame(real x)
155 frames_.push_back(AnalysisDataTestInputFrame(frames_.size(), x));
156 return frames_.back();
159 void AnalysisDataTestInput::addFrameWithValues(real x, real y1)
161 AnalysisDataTestInputFrame &frame = addFrame(x);
162 frame.addPointSetWithValues(0, 0, y1);
165 void AnalysisDataTestInput::addFrameWithValues(real x, real y1, real y2)
167 AnalysisDataTestInputFrame &frame = addFrame(x);
168 frame.addPointSetWithValues(0, 0, y1, y2);
171 void AnalysisDataTestInput::addFrameWithValues(real x, real y1, real y2, real y3)
173 AnalysisDataTestInputFrame &frame = addFrame(x);
174 frame.addPointSetWithValues(0, 0, y1, y2, y3);
177 void AnalysisDataTestInput::addFrameWithValueAndError(real x, real y1, real e1)
179 AnalysisDataTestInputFrame &frame = addFrame(x);
180 frame.addPointSetWithValueAndError(0, 0, y1, e1);
184 /********************************************************************
188 AnalysisDataTestFixture::AnalysisDataTestFixture()
193 void AnalysisDataTestFixture::setupDataObject(const AnalysisDataTestInput &input,
196 data->setDataSetCount(input.dataSetCount());
197 for (int i = 0; i < input.dataSetCount(); ++i)
199 data->setColumnCount(i, input.columnCount(i));
201 data->setMultipoint(input.isMultipoint());
205 void AnalysisDataTestFixture::presentAllData(const AnalysisDataTestInput &input,
208 gmx::AnalysisDataParallelOptions options;
209 gmx::AnalysisDataHandle handle = data->startData(options);
210 for (int row = 0; row < input.frameCount(); ++row)
212 presentDataFrame(input, row, handle);
213 EXPECT_EQ(row + 1, data->frameCount());
219 void AnalysisDataTestFixture::presentDataFrame(const AnalysisDataTestInput &input,
220 int row, AnalysisDataHandle handle)
222 const AnalysisDataTestInputFrame &frame = input.frame(row);
223 handle.startFrame(row, frame.x(), frame.dx());
224 for (int i = 0; i < frame.pointSetCount(); ++i)
226 const AnalysisDataTestInputPointSet &points = frame.pointSet(i);
227 handle.selectDataSet(points.dataSetIndex());
228 for (int j = 0; j < points.size(); ++j)
230 if (points.hasError(j))
232 handle.setPoint(j + points.firstColumn(),
233 points.y(j), points.error(j), points.present(j));
237 handle.setPoint(j + points.firstColumn(),
238 points.y(j), points.present(j));
241 if (input.isMultipoint())
243 handle.finishPointSet();
246 handle.finishFrame();
251 AnalysisDataTestFixture::addStaticCheckerModule(const AnalysisDataTestInput &data,
252 AbstractAnalysisData *source)
254 MockAnalysisDataModulePointer module(new MockAnalysisDataModule(0));
255 module->setupStaticCheck(data, source, false);
256 source->addModule(module);
261 AnalysisDataTestFixture::addStaticParallelCheckerModule(
262 const AnalysisDataTestInput &data,
263 AbstractAnalysisData *source)
265 MockAnalysisDataModulePointer module(new MockAnalysisDataModule(0));
266 module->setupStaticCheck(data, source, true);
267 source->addModule(module);
272 AnalysisDataTestFixture::addStaticColumnCheckerModule(const AnalysisDataTestInput &data,
274 AbstractAnalysisData *source)
276 MockAnalysisDataModulePointer module(new MockAnalysisDataModule(0));
277 module->setupStaticColumnCheck(data, firstcol, n, source);
278 source->addColumnModule(firstcol, n, module);
283 AnalysisDataTestFixture::addStaticStorageCheckerModule(const AnalysisDataTestInput &data,
285 AbstractAnalysisData *source)
287 MockAnalysisDataModulePointer module(new MockAnalysisDataModule(0));
288 module->setupStaticStorageCheck(data, storageCount, source);
289 source->addModule(module);
294 AnalysisDataTestFixture::addReferenceCheckerModule(TestReferenceChecker checker,
296 AbstractAnalysisData *source)
298 MockAnalysisDataModulePointer module(new MockAnalysisDataModule(0));
299 module->setupReferenceCheck(checker.checkCompound("AnalysisData", id), source);
300 source->addModule(module);
305 AnalysisDataTestFixture::addReferenceCheckerModule(const char *id,
306 AbstractAnalysisData *source)
308 addReferenceCheckerModule(data_.rootChecker(), id, source);