src/gromacs/selection/tests/refdata/referencedata.xsl

   1 <?xml version="1.0"?>
   2
   3 <xsl:stylesheet version="1.0"
   4     xmlns:xsl="http://www.w3.org/1999/XSL/Transform">
   5
   6 <xsl:import href="common-referencedata.xsl"/>
   7
   8 <!-- Index handling reference data -->
   9
  10 <xsl:template match="BlockAtoms">
  11     <xsl:if test="Sequence[@Name='Input']">
  12         <h2>Input Atoms</h2>
  13         <xsl:call-template name="SequenceAsHorizontalTable">
  14             <xsl:with-param name="root" select="Sequence[@Name='Input']"/>
  15         </xsl:call-template>
  16     </xsl:if>
  17     <h2>Blocks</h2>
  18     <table border="1">
  19         <tr>
  20             <th>Atom count</th>
  21             <th>Atoms</th>
  22         </tr>
  23         <xsl:for-each select="Block">
  24             <tr>
  25                 <td><xsl:value-of select="Sequence[@Name='Atoms']/Int[@Name='Length']"/></td>
  26                 <td>
  27                     <xsl:call-template name="SequenceAsCSV">
  28                         <xsl:with-param name="root" select="Sequence[@Name='Atoms']"/>
  29                     </xsl:call-template>
  30                 </td>
  31             </tr>
  32         </xsl:for-each>
  33     </table>
  34 </xsl:template>
  35
  36 <xsl:template match="IndexMapping">
  37     <h2><xsl:value-of select="@Name"/></h2>
  38     <h3>Input Atoms</h3>
  39     <xsl:call-template name="SequenceAsHorizontalTable">
  40         <xsl:with-param name="root" select="Sequence[@Name='Input']"/>
  41     </xsl:call-template>
  42     <h3>Mapping</h3>
  43     <table border="1">
  44         <tr>
  45             <th>RefId</th>
  46             <xsl:if test="Block/Int[@Name='MapId']">
  47                 <th>MapId</th>
  48             </xsl:if>
  49             <th>Atom count</th>
  50             <th>Atoms</th>
  51         </tr>
  52         <xsl:for-each select="Block">
  53             <tr>
  54                 <td><xsl:value-of select="Int[@Name='RefId']"/></td>
  55                 <xsl:if test="Int[@Name='MapId']">
  56                     <td><xsl:value-of select="Int[@Name='MapId']"/></td>
  57                 </xsl:if>
  58                 <td><xsl:value-of select="Sequence[@Name='Atoms']/Int[@Name='Length']"/></td>
  59                 <td>
  60                     <xsl:call-template name="SequenceAsCSV">
  61                         <xsl:with-param name="root" select="Sequence[@Name='Atoms']"/>
  62                     </xsl:call-template>
  63                 </td>
  64             </tr>
  65         </xsl:for-each>
  66     </table>
  67 </xsl:template>
  68
  69 <xsl:template match="OrgIdGroups">
  70     <h2>Groups: <xsl:value-of select="@Name"/></h2>
  71     <table>
  72         <tr>
  73             <td>Group count:</td>
  74             <td><xsl:value-of select="Int[@Name='GroupCount']"/></td>
  75         </tr>
  76         <tr>
  77             <td>OrgId</td>
  78             <td>
  79                 <xsl:call-template name="SequenceAsCSV">
  80                     <xsl:with-param name="root" select="Sequence[@Name='OrgId']"/>
  81                 </xsl:call-template>
  82             </td>
  83         </tr>
  84     </table>
  85 </xsl:template>
  86
  87 <!-- Position calculation reference data -->
  88
  89 <xsl:template match="InitializedPositions">
  90     <h2>Initialized Positions</h2>
  91     <xsl:apply-templates />
  92 </xsl:template>
  93
  94 <xsl:template match="EvaluatedPositions">
  95     <h2>Evaluated for <xsl:value-of select="@Name"/></h2>
  96     <xsl:apply-templates />
  97 </xsl:template>
  98
  99 <xsl:template match="Positions">
 100     <xsl:if test="@Name">
 101         <h3><xsl:value-of select="@Name"/></h3>
 102     </xsl:if>
 103     <table>
 104         <tr>
 105             <td>Count:</td>
 106             <td>
 107                 <xsl:value-of select="Int[@Name='Count']"/>
 108                 (type: <xsl:value-of select="String[@Name='Type']"/>)
 109             </td>
 110         </tr>
 111         <tr>
 112             <td>Blocks:</td>
 113             <td>
 114                 <xsl:call-template name="SequenceAsCSV">
 115                     <xsl:with-param name="root" select="Sequence[@Name='Block']"/>
 116                 </xsl:call-template>
 117             </td>
 118         </tr>
 119     </table>
 120     <table border="1">
 121         <tr>
 122             <th>RefId</th>
 123             <th>Atom count</th>
 124             <th>Atoms</th>
 125             <xsl:if test="Position/Vector[@Name='Coordinates']">
 126                 <th>Coordinates</th>
 127             </xsl:if>
 128             <xsl:if test="Position/Vector[@Name='Velocity']">
 129                 <th>Velocity</th>
 130             </xsl:if>
 131             <xsl:if test="Position/Vector[@Name='Force']">
 132                 <th>Force</th>
 133             </xsl:if>
 134         </tr>
 135         <xsl:for-each select="Position">
 136             <tr>
 137                 <td><xsl:value-of select="Int[@Name='RefId']"/></td>
 138                 <td><xsl:value-of select="Sequence[@Name='Atoms']/Int[@Name='Length']"/></td>
 139                 <td>
 140                     <xsl:call-template name="SequenceAsCSV">
 141                         <xsl:with-param name="root" select="Sequence[@Name='Atoms']"/>
 142                     </xsl:call-template>
 143                 </td>
 144                 <xsl:if test="Vector[@Name='Coordinates']">
 145                     <td>
 146                         <xsl:apply-templates select="Vector[@Name='Coordinates']"/>
 147                     </td>
 148                 </xsl:if>
 149                 <xsl:if test="Vector[@Name='Velocity']">
 150                     <td>
 151                         <xsl:apply-templates select="Vector[@Name='Velocity']"/>
 152                     </td>
 153                 </xsl:if>
 154                 <xsl:if test="Vector[@Name='Force']">
 155                     <td>
 156                         <xsl:apply-templates select="Vector[@Name='Force']"/>
 157                     </td>
 158                 </xsl:if>
 159             </tr>
 160         </xsl:for-each>
 161     </table>
 162 </xsl:template>
 163
 164 <!-- Selection reference data -->
 165
 166 <xsl:key name="SelectionName" match="ParsedSelections/ParsedSelection" use="@Name"/>
 167
 168 <xsl:template match="ParsedSelections">
 169     <h2>Parsed Selections</h2>
 170     <table border="1">
 171         <tr>
 172             <th/>
 173             <th>Input</th>
 174             <xsl:if test="*/String[@Name='Name']">
 175                 <th>Name</th>
 176             </xsl:if>
 177             <th>Text</th>
 178             <th>Dynamic</th>
 179         </tr>
 180         <xsl:for-each select="*">
 181         <tr>
 182             <td><xsl:value-of select="@Name"/></td>
 183             <td><xsl:value-of select="String[@Name='Input']"/></td>
 184             <xsl:if test="String[@Name='Name']">
 185                 <td><xsl:value-of select="String[@Name='Name']"/></td>
 186             </xsl:if>
 187             <td><xsl:value-of select="String[@Name='Text']"/></td>
 188             <td><xsl:value-of select="Bool[@Name='Dynamic']"/></td>
 189         </tr>
 190         </xsl:for-each>
 191     </table>
 192 </xsl:template>
 193
 194 <xsl:template match="CompiledSelections">
 195     <h2>Compiled Selections</h2>
 196     <xsl:apply-templates />
 197 </xsl:template>
 198
 199 <xsl:template match="EvaluatedSelections">
 200     <h2>Evaluated for <xsl:value-of select="@Name"/></h2>
 201     <xsl:apply-templates />
 202 </xsl:template>
 203
 204 <xsl:template match="Selection">
 205     <h3><xsl:value-of select="@Name"/></h3>
 206     <table>
 207         <xsl:if test="String[@Name='Name']">
 208             <tr>
 209                 <td>Name:</td>
 210                 <td><xsl:value-of select="String[@Name='Name']"/></td>
 211             </tr>
 212         </xsl:if>
 213         <tr>
 214             <td>Selection text:</td>
 215             <td>
 216                 <xsl:value-of select="key('SelectionName', @Name)/String[@Name='Text']"/>
 217             </td>
 218         </tr>
 219         <xsl:if test="Sequence[@Name='Atoms']">
 220             <tr>
 221                 <td>Atoms (<xsl:value-of select="Sequence[@Name='Atoms']/Int[@Name='Length']"/>):</td>
 222                 <td>
 223                     <xsl:call-template name="SequenceAsCSV">
 224                         <xsl:with-param name="root" select="Sequence[@Name='Atoms']"/>
 225                     </xsl:call-template>
 226                 </td>
 227             </tr>
 228         </xsl:if>
 229     </table>
 230     <xsl:apply-templates select="Sequence[@Name='Positions']"/>
 231 </xsl:template>
 232
 233 <xsl:template match="Selection/Sequence[@Name='Positions']">
 234     <p>
 235         Positions (count: <xsl:value-of select="Int[@Name='Length']"/>):
 236         <table border="1">
 237             <tr>
 238                 <xsl:if test="Position/Sequence[@Name='Atoms']">
 239                     <th>Atom count</th>
 240                     <th>Atoms</th>
 241                 </xsl:if>
 242                 <xsl:if test="Position/Int[@Name='RefId']">
 243                     <th>RefId</th>
 244                     <th>MappedId</th>
 245                 </xsl:if>
 246                 <xsl:if test="Position/Vector[@Name='Coordinates']">
 247                     <th>Coordinates</th>
 248                 </xsl:if>
 249                 <xsl:if test="Position/Real[@Name='Mass']">
 250                     <th>Mass</th>
 251                 </xsl:if>
 252                 <xsl:if test="Position/Real[@Name='Charge']">
 253                     <th>Charge</th>
 254                 </xsl:if>
 255             </tr>
 256             <xsl:for-each select="Position">
 257             <tr>
 258                 <xsl:if test="Sequence[@Name='Atoms']">
 259                     <td><xsl:value-of select="Sequence[@Name='Atoms']/Int[@Name='Length']"/></td>
 260                     <td>
 261                         <xsl:call-template name="SequenceAsCSV">
 262                             <xsl:with-param name="root" select="Sequence[@Name='Atoms']"/>
 263                         </xsl:call-template>
 264                     </td>
 265                 </xsl:if>
 266                 <xsl:if test="Int[@Name='RefId']">
 267                     <td><xsl:value-of select="Int[@Name='RefId']"/></td>
 268                     <td><xsl:value-of select="Int[@Name='MappedId']"/></td>
 269                 </xsl:if>
 270                 <xsl:if test="Vector[@Name='Coordinates']">
 271                     <td>
 272                         <xsl:apply-templates select="Vector[@Name='Coordinates']"/>
 273                     </td>
 274                 </xsl:if>
 275                 <xsl:if test="Real[@Name='Mass']">
 276                     <td><xsl:value-of select="Real[@Name='Mass']"/></td>
 277                 </xsl:if>
 278                 <xsl:if test="Real[@Name='Charge']">
 279                     <td><xsl:value-of select="Real[@Name='Charge']"/></td>
 280                 </xsl:if>
 281             </tr>
 282             </xsl:for-each>
 283         </table>
 284     </p>
 285 </xsl:template>
 286
 287 </xsl:stylesheet>