src/gromacs/mdlib/genborn_allvsall_sse2_single.c

   1 /*
   2  *                This source code is part of
   3  *
   4  *                 G   R   O   M   A   C   S
   5  *
   6  * Copyright (c) 1991-2000, University of Groningen, The Netherlands.
   7  * Copyright (c) 2001-2009, The GROMACS Development Team
   8  *
   9  * Gromacs is a library for molecular simulation and trajectory analysis,
  10  * written by Erik Lindahl, David van der Spoel, Berk Hess, and others - for
  11  * a full list of developers and information, check out http://www.gromacs.org
  12  *
  13  * This program is free software; you can redistribute it and/or modify it under
  14  * the terms of the GNU Lesser General Public License as published by the Free
  15  * Software Foundation; either version 2 of the License, or (at your option) any
  16  * later version.
  17  * As a special exception, you may use this file as part of a free software
  18  * library without restriction.  Specifically, if other files instantiate
  19  * templates or use macros or inline functions from this file, or you compile
  20  * this file and link it with other files to produce an executable, this
  21  * file does not by itself cause the resulting executable to be covered by
  22  * the GNU Lesser General Public License.
  23  *
  24  * In plain-speak: do not worry about classes/macros/templates either - only
  25  * changes to the library have to be LGPL, not an application linking with it.
  26  *
  27  * To help fund GROMACS development, we humbly ask that you cite
  28  * the papers people have written on it - you can find them on the website!
  29  */
  30 #ifdef HAVE_CONFIG_H
  31 #include <config.h>
  32 #endif
  33
  34 #include <math.h>
  35 #include "types/simple.h"
  36
  37 #include "vec.h"
  38 #include "smalloc.h"
  39
  40 #include "partdec.h"
  41 #include "network.h"
  42 #include "physics.h"
  43 #include "genborn.h"
  44 #include "genborn_allvsall.h"
  45
  46 #if ( (defined(GMX_IA32_SSE) || defined(GMX_X86_64_SSE) || defined(GMX_SSE2)) && !defined(GMX_DOUBLE) )
  47
  48 #include <gmx_sse2_single.h>
  49
  50
  51 #define SIMD_WIDTH 4
  52 #define UNROLLI    4
  53 #define UNROLLJ    4
  54
  55
  56
  57
  58
  59
  60
  61
  62
  63 typedef struct
  64 {
  65     int *      jindex_gb;
  66     int **     prologue_mask_gb;
  67     int **     epilogue_mask;
  68     int *      imask;
  69     real *     gb_radius;
  70     real *     workparam;
  71     real *     work;
  72     real *     x_align;
  73     real *     y_align;
  74     real *     z_align;
  75     real *     fx_align;
  76         real *     fy_align;
  77         real *     fz_align;
  78 }
  79 gmx_allvsallgb2_data_t;
  80
  81
  82 static int
  83 calc_maxoffset(int i,int natoms)
  84 {
  85     int maxoffset;
  86
  87     if ((natoms % 2) == 1)
  88     {
  89         /* Odd number of atoms, easy */
  90         maxoffset = natoms/2;
  91     }
  92     else if ((natoms % 4) == 0)
  93     {
  94         /* Multiple of four is hard */
  95         if (i < natoms/2)
  96         {
  97             if ((i % 2) == 0)
  98             {
  99                 maxoffset=natoms/2;
 100             }
 101             else
 102             {
 103                 maxoffset=natoms/2-1;
 104             }
 105         }
 106         else
 107         {
 108             if ((i % 2) == 1)
 109             {
 110                 maxoffset=natoms/2;
 111             }
 112             else
 113             {
 114                 maxoffset=natoms/2-1;
 115             }
 116         }
 117     }
 118     else
 119     {
 120         /* natoms/2 = odd */
 121         if ((i % 2) == 0)
 122         {
 123             maxoffset=natoms/2;
 124         }
 125         else
 126         {
 127             maxoffset=natoms/2-1;
 128         }
 129     }
 130
 131     return maxoffset;
 132 }
 133
 134 static void
 135 setup_gb_exclusions_and_indices(gmx_allvsallgb2_data_t *   aadata,
 136                                 t_ilist *                  ilist,
 137                                 int                        start,
 138                                 int                        end,
 139                                 int                        natoms,
 140                                 gmx_bool                       bInclude12,
 141                                 gmx_bool                       bInclude13,
 142                                 gmx_bool                       bInclude14)
 143 {
 144     int i,j,k,tp;
 145     int a1,a2;
 146     int ni0,ni1,nj0,nj1,nj;
 147     int imin,imax,iexcl;
 148     int max_offset;
 149     int max_excl_offset;
 150     int firstinteraction;
 151     int ibase;
 152     int  *pi;
 153
 154     /* This routine can appear to be a bit complex, but it is mostly book-keeping.
 155      * To enable the fast all-vs-all kernel we need to be able to stream through all coordinates
 156      * whether they should interact or not.
 157      *
 158      * To avoid looping over the exclusions, we create a simple mask that is 1 if the interaction
 159      * should be present, otherwise 0. Since exclusions typically only occur when i & j are close,
 160      * we create a jindex array with three elements per i atom: the starting point, the point to
 161      * which we need to check exclusions, and the end point.
 162      * This way we only have to allocate a short exclusion mask per i atom.
 163      */
 164
 165     ni0 = (start/UNROLLI)*UNROLLI;
 166     ni1 = ((end+UNROLLI-1)/UNROLLI)*UNROLLI;
 167
 168     /* Set the interaction mask to only enable the i atoms we want to include */
 169     snew(pi,natoms+UNROLLI+2*SIMD_WIDTH);
 170     aadata->imask = (int *) (((size_t) pi + 16) & (~((size_t) 15)));
 171     for(i=0;i<natoms+UNROLLI;i++)
 172     {
 173         aadata->imask[i] = (i>=start && i<end) ? 0xFFFFFFFF : 0;
 174     }
 175
 176     /* Allocate memory for our modified jindex array */
 177     snew(aadata->jindex_gb,4*(natoms+UNROLLI));
 178     for(i=0;i<4*(natoms+UNROLLI);i++)
 179     {
 180         aadata->jindex_gb[i] = 0;
 181     }
 182
 183     /* Create the exclusion masks for the prologue part */
 184         snew(aadata->prologue_mask_gb,natoms+UNROLLI); /* list of pointers */
 185
 186     /* First zero everything to avoid uninitialized data */
 187     for(i=0;i<natoms+UNROLLI;i++)
 188     {
 189         aadata->prologue_mask_gb[i] = NULL;
 190     }
 191
 192     /* Calculate the largest exclusion range we need for each UNROLLI-tuplet of i atoms. */
 193     for(ibase=ni0;ibase<ni1;ibase+=UNROLLI)
 194         {
 195         max_excl_offset = -1;
 196
 197         /* First find maxoffset for the next 4 atoms (or fewer if we are close to end) */
 198         imax = ((ibase+UNROLLI) < end) ? (ibase+UNROLLI) : end;
 199
 200         /* Which atom is the first we (might) interact with? */
 201         imin = natoms; /* Guaranteed to be overwritten by one of 'firstinteraction' */
 202         for(i=ibase;i<imax;i++)
 203         {
 204             /* Before exclusions, which atom is the first we (might) interact with? */
 205             firstinteraction = i+1;
 206             max_offset = calc_maxoffset(i,natoms);
 207
 208             if(!bInclude12)
 209             {
 210                 for(j=0;j<ilist[F_GB12].nr;j+=3)
 211                 {
 212                     a1 = ilist[F_GB12].iatoms[j+1];
 213                     a2 = ilist[F_GB12].iatoms[j+2];
 214
 215                     if(a1==i)
 216                     {
 217                         k = a2;
 218                     }
 219                     else if(a2==i)
 220                     {
 221                         k = a1;
 222                     }
 223                     else
 224                     {
 225                         continue;
 226                     }
 227
 228                     if(k==firstinteraction)
 229                     {
 230                         firstinteraction++;
 231                     }
 232                 }
 233             }
 234             if(!bInclude13)
 235             {
 236                 for(j=0;j<ilist[F_GB13].nr;j+=3)
 237                 {
 238                     a1 = ilist[F_GB13].iatoms[j+1];
 239                     a2 = ilist[F_GB13].iatoms[j+2];
 240
 241                     if(a1==i)
 242                     {
 243                         k = a2;
 244                     }
 245                     else if(a2==i)
 246                     {
 247                         k = a1;
 248                     }
 249                     else
 250                     {
 251                         continue;
 252                     }
 253
 254                     if(k==firstinteraction)
 255                     {
 256                         firstinteraction++;
 257                     }
 258                 }
 259             }
 260             if(!bInclude14)
 261             {
 262                 for(j=0;j<ilist[F_GB14].nr;j+=3)
 263                 {
 264                     a1 = ilist[F_GB14].iatoms[j+1];
 265                     a2 = ilist[F_GB14].iatoms[j+2];
 266                     if(a1==i)
 267                     {
 268                         k = a2;
 269                     }
 270                     else if(a2==i)
 271                     {
 272                         k = a1;
 273                     }
 274                     else
 275                     {
 276                         continue;
 277                     }
 278
 279                     if(k==firstinteraction)
 280                     {
 281                         firstinteraction++;
 282                     }
 283                 }
 284             }
 285             imin = (firstinteraction < imin) ? firstinteraction : imin;
 286         }
 287         /* round down to j unrolling factor */
 288         imin = (imin/UNROLLJ)*UNROLLJ;
 289
 290         for(i=ibase;i<imax;i++)
 291         {
 292             max_offset = calc_maxoffset(i,natoms);
 293
 294             if(!bInclude12)
 295             {
 296                 for(j=0;j<ilist[F_GB12].nr;j+=3)
 297                 {
 298                     a1 = ilist[F_GB12].iatoms[j+1];
 299                     a2 = ilist[F_GB12].iatoms[j+2];
 300
 301                     if(a1==i)
 302                     {
 303                         k = a2;
 304                     }
 305                     else if(a2==i)
 306                     {
 307                         k = a1;
 308                     }
 309                     else
 310                     {
 311                         continue;
 312                     }
 313
 314                     if(k<imin)
 315                     {
 316                         k += natoms;
 317                     }
 318
 319                     if(k>i+max_offset)
 320                     {
 321                         continue;
 322                     }
 323
 324                     k = k - imin;
 325
 326                     if( k+natoms <= max_offset )
 327                     {
 328                         k+=natoms;
 329                     }
 330                     max_excl_offset = (k > max_excl_offset) ? k : max_excl_offset;
 331                 }
 332             }
 333             if(!bInclude13)
 334             {
 335                 for(j=0;j<ilist[F_GB13].nr;j+=3)
 336                 {
 337                     a1 = ilist[F_GB13].iatoms[j+1];
 338                     a2 = ilist[F_GB13].iatoms[j+2];
 339
 340                     if(a1==i)
 341                     {
 342                         k = a2;
 343                     }
 344                     else if(a2==i)
 345                     {
 346                         k = a1;
 347                     }
 348                     else
 349                     {
 350                         continue;
 351                     }
 352
 353                     if(k<imin)
 354                     {
 355                         k += natoms;
 356                     }
 357
 358                     if(k>i+max_offset)
 359                     {
 360                         continue;
 361                     }
 362
 363                     k = k - imin;
 364
 365                     if( k+natoms <= max_offset )
 366                     {
 367                         k+=natoms;
 368                     }
 369                     max_excl_offset = (k > max_excl_offset) ? k : max_excl_offset;
 370                 }
 371             }
 372             if(!bInclude14)
 373             {
 374                 for(j=0;j<ilist[F_GB14].nr;j+=3)
 375                 {
 376                     a1 = ilist[F_GB14].iatoms[j+1];
 377                     a2 = ilist[F_GB14].iatoms[j+2];
 378
 379                     if(a1==i)
 380                     {
 381                         k = a2;
 382                     }
 383                     else if(a2==i)
 384                     {
 385                         k = a1;
 386                     }
 387                     else
 388                     {
 389                         continue;
 390                     }
 391
 392                     if(k<imin)
 393                     {
 394                         k += natoms;
 395                     }
 396
 397                     if(k>i+max_offset)
 398                     {
 399                         continue;
 400                     }
 401
 402                     k = k - imin;
 403
 404                     if( k+natoms <= max_offset )
 405                     {
 406                         k+=natoms;
 407                     }
 408                     max_excl_offset = (k > max_excl_offset) ? k : max_excl_offset;
 409                 }
 410             }
 411         }
 412
 413         /* The offset specifies the last atom to be excluded, so add one unit to get an upper loop limit */
 414         max_excl_offset++;
 415         /* round up to j unrolling factor */
 416         max_excl_offset = (max_excl_offset/UNROLLJ+1)*UNROLLJ;
 417
 418         /* Set all the prologue masks length to this value (even for i>end) */
 419         for(i=ibase;i<ibase+UNROLLI;i++)
 420         {
 421             aadata->jindex_gb[4*i]   = imin;
 422             aadata->jindex_gb[4*i+1] = imin+max_excl_offset;
 423         }
 424     }
 425
 426     /* Now the hard part, loop over it all again to calculate the actual contents of the prologue masks */
 427     for(ibase=ni0;ibase<ni1;ibase+=UNROLLI)
 428     {
 429         for(i=ibase;i<ibase+UNROLLI;i++)
 430         {
 431             nj = aadata->jindex_gb[4*i+1] - aadata->jindex_gb[4*i];
 432             imin = aadata->jindex_gb[4*i];
 433
 434             /* Allocate aligned memory */
 435             snew(pi,nj+2*SIMD_WIDTH);
 436             aadata->prologue_mask_gb[i] = (int *) (((size_t) pi + 16) & (~((size_t) 15)));
 437
 438             max_offset = calc_maxoffset(i,natoms);
 439
 440             /* Include interactions i+1 <= j < i+maxoffset */
 441             for(k=0;k<nj;k++)
 442             {
 443                 j = imin + k;
 444
 445                 if( (j>i) && (j<=i+max_offset) )
 446                 {
 447                     aadata->prologue_mask_gb[i][k] = 0xFFFFFFFF;
 448                 }
 449                 else
 450                 {
 451                     aadata->prologue_mask_gb[i][k] = 0;
 452                 }
 453             }
 454
 455             /* Clear out the explicit exclusions */
 456             if(i<end)
 457             {
 458                 if(!bInclude12)
 459                 {
 460                     for(j=0;j<ilist[F_GB12].nr;j+=3)
 461                     {
 462                         a1 = ilist[F_GB12].iatoms[j+1];
 463                         a2 = ilist[F_GB12].iatoms[j+2];
 464
 465                         if(a1==i)
 466                         {
 467                             k = a2;
 468                         }
 469                         else if(a2==i)
 470                         {
 471                             k = a1;
 472                         }
 473                         else
 474                         {
 475                             continue;
 476                         }
 477
 478                         if(k>i+max_offset)
 479                         {
 480                             continue;
 481                         }
 482                         k = k-i;
 483
 484                         if( k+natoms <= max_offset )
 485                         {
 486                             k+=natoms;
 487                         }
 488
 489                         k = k+i-imin;
 490                         if(k>=0)
 491                         {
 492                             aadata->prologue_mask_gb[i][k] = 0;
 493                         }
 494                     }
 495                 }
 496                 if(!bInclude13)
 497                 {
 498                     for(j=0;j<ilist[F_GB13].nr;j+=3)
 499                     {
 500                         a1 = ilist[F_GB13].iatoms[j+1];
 501                         a2 = ilist[F_GB13].iatoms[j+2];
 502
 503                         if(a1==i)
 504                         {
 505                             k = a2;
 506                         }
 507                         else if(a2==i)
 508                         {
 509                             k = a1;
 510                         }
 511                         else
 512                         {
 513                             continue;
 514                         }
 515
 516                         if(k>i+max_offset)
 517                         {
 518                             continue;
 519                         }
 520                         k = k-i;
 521
 522                         if( k+natoms <= max_offset )
 523                         {
 524                             k+=natoms;
 525                         }
 526
 527                         k = k+i-imin;
 528                         if(k>=0)
 529                         {
 530                             aadata->prologue_mask_gb[i][k] = 0;
 531                         }
 532                     }
 533                 }
 534                 if(!bInclude14)
 535                 {
 536                     for(j=0;j<ilist[F_GB14].nr;j+=3)
 537                     {
 538                         a1 = ilist[F_GB14].iatoms[j+1];
 539                         a2 = ilist[F_GB14].iatoms[j+2];
 540
 541                         if(a1==i)
 542                         {
 543                             k = a2;
 544                         }
 545                         else if(a2==i)
 546                         {
 547                             k = a1;
 548                         }
 549                         else
 550                         {
 551                             continue;
 552                         }
 553
 554                         if(k>i+max_offset)
 555                         {
 556                             continue;
 557                         }
 558                         k = k-i;
 559
 560                         if( k+natoms <= max_offset )
 561                         {
 562                             k+=natoms;
 563                         }
 564
 565                         k = k+i-imin;
 566                         if(k>=0)
 567                         {
 568                             aadata->prologue_mask_gb[i][k] = 0;
 569                         }
 570                     }
 571                 }
 572             }
 573         }
 574     }
 575
 576     /* Construct the epilogue mask - this just contains the check for maxoffset */
 577     snew(aadata->epilogue_mask,natoms+UNROLLI);
 578
 579     /* First zero everything to avoid uninitialized data */
 580     for(i=0;i<natoms+UNROLLI;i++)
 581     {
 582         aadata->jindex_gb[4*i+2]    = aadata->jindex_gb[4*i+1];
 583         aadata->jindex_gb[4*i+3]    = aadata->jindex_gb[4*i+1];
 584         aadata->epilogue_mask[i] = NULL;
 585     }
 586
 587     for(ibase=ni0;ibase<ni1;ibase+=UNROLLI)
 588     {
 589         /* Find the lowest index for which we need to use the epilogue */
 590         imin = ibase;
 591         max_offset = calc_maxoffset(imin,natoms);
 592
 593         imin = imin + 1 + max_offset;
 594
 595         /* Find largest index for which we need to use the epilogue */
 596         imax = ibase + UNROLLI-1;
 597         imax = (imax < end) ? imax : end;
 598
 599         max_offset = calc_maxoffset(imax,natoms);
 600         imax = imax + 1 + max_offset + UNROLLJ - 1;
 601
 602         for(i=ibase;i<ibase+UNROLLI;i++)
 603         {
 604             /* Start of epilogue - round down to j tile limit */
 605             aadata->jindex_gb[4*i+2] = (imin/UNROLLJ)*UNROLLJ;
 606             /* Make sure we dont overlap - for small systems everything is done in the prologue */
 607             aadata->jindex_gb[4*i+2] = (aadata->jindex_gb[4*i+1] > aadata->jindex_gb[4*i+2]) ? aadata->jindex_gb[4*i+1] : aadata->jindex_gb[4*i+2];
 608             /* Round upwards to j tile limit */
 609             aadata->jindex_gb[4*i+3] = (imax/UNROLLJ)*UNROLLJ;
 610             /* Make sure we dont have a negative range for the epilogue */
 611             aadata->jindex_gb[4*i+3] = (aadata->jindex_gb[4*i+2] > aadata->jindex_gb[4*i+3]) ? aadata->jindex_gb[4*i+2] : aadata->jindex_gb[4*i+3];
 612         }
 613     }
 614
 615     /* And fill it with data... */
 616
 617     for(ibase=ni0;ibase<ni1;ibase+=UNROLLI)
 618     {
 619         for(i=ibase;i<ibase+UNROLLI;i++)
 620         {
 621
 622             nj = aadata->jindex_gb[4*i+3] - aadata->jindex_gb[4*i+2];
 623
 624             /* Allocate aligned memory */
 625             snew(pi,nj+2*SIMD_WIDTH);
 626             aadata->epilogue_mask[i] = (int *) (((size_t) pi + 16) & (~((size_t) 15)));
 627
 628             max_offset = calc_maxoffset(i,natoms);
 629
 630             for(k=0;k<nj;k++)
 631             {
 632                 j = aadata->jindex_gb[4*i+2] + k;
 633                 aadata->epilogue_mask[i][k] = (j <= i+max_offset) ? 0xFFFFFFFF : 0;
 634             }
 635         }
 636     }
 637 }
 638
 639
 640 static void
 641 genborn_allvsall_setup(gmx_allvsallgb2_data_t **  p_aadata,
 642                        gmx_localtop_t *           top,
 643                        gmx_genborn_t *            born,
 644                        t_mdatoms *                mdatoms,
 645                        real                       radius_offset,
 646                        int                        gb_algorithm,
 647                        gmx_bool                       bInclude12,
 648                        gmx_bool                       bInclude13,
 649                        gmx_bool                       bInclude14)
 650 {
 651         int i,j,idx;
 652     int natoms;
 653         gmx_allvsallgb2_data_t *aadata;
 654     real *p;
 655
 656     natoms = mdatoms->nr;
 657
 658         snew(aadata,1);
 659         *p_aadata = aadata;
 660
 661         snew(p,2*natoms+2*SIMD_WIDTH);
 662         aadata->x_align = (real *) (((size_t) p + 16) & (~((size_t) 15)));
 663         snew(p,2*natoms+2*SIMD_WIDTH);
 664         aadata->y_align = (real *) (((size_t) p + 16) & (~((size_t) 15)));
 665         snew(p,2*natoms+2*SIMD_WIDTH);
 666         aadata->z_align = (real *) (((size_t) p + 16) & (~((size_t) 15)));
 667         snew(p,2*natoms+2*SIMD_WIDTH);
 668         aadata->fx_align = (real *) (((size_t) p + 16) & (~((size_t) 15)));
 669         snew(p,2*natoms+2*SIMD_WIDTH);
 670         aadata->fy_align = (real *) (((size_t) p + 16) & (~((size_t) 15)));
 671         snew(p,2*natoms+2*SIMD_WIDTH);
 672         aadata->fz_align = (real *) (((size_t) p + 16) & (~((size_t) 15)));
 673
 674     snew(p,2*natoms+UNROLLJ+SIMD_WIDTH);
 675     aadata->gb_radius = (real *) (((size_t) p + 16) & (~((size_t) 15)));
 676
 677     snew(p,2*natoms+UNROLLJ+SIMD_WIDTH);
 678     aadata->workparam = (real *) (((size_t) p + 16) & (~((size_t) 15)));
 679
 680     snew(p,2*natoms+UNROLLJ+SIMD_WIDTH);
 681     aadata->work = (real *) (((size_t) p + 16) & (~((size_t) 15)));
 682
 683     for(i=0;i<mdatoms->nr;i++)
 684     {
 685         aadata->gb_radius[i] = top->atomtypes.gb_radius[mdatoms->typeA[i]] - radius_offset;
 686         if(gb_algorithm==egbSTILL)
 687         {
 688             aadata->workparam[i] = born->vsolv[i];
 689         }
 690         else if(gb_algorithm==egbOBC)
 691         {
 692             aadata->workparam[i] = born->param[i];
 693         }
 694         aadata->work[i]      = 0.0;
 695     }
 696     for(i=0;i<mdatoms->nr;i++)
 697     {
 698         aadata->gb_radius[natoms+i] = aadata->gb_radius[i];
 699         aadata->workparam[natoms+i] = aadata->workparam[i];
 700         aadata->work[natoms+i]      = aadata->work[i];
 701     }
 702
 703     for(i=0;i<2*natoms+SIMD_WIDTH;i++)
 704         {
 705                 aadata->x_align[i] = 0.0;
 706                 aadata->y_align[i] = 0.0;
 707                 aadata->z_align[i] = 0.0;
 708                 aadata->fx_align[i] = 0.0;
 709                 aadata->fy_align[i] = 0.0;
 710                 aadata->fz_align[i] = 0.0;
 711         }
 712
 713     setup_gb_exclusions_and_indices(aadata,top->idef.il,mdatoms->start,mdatoms->start+mdatoms->homenr,mdatoms->nr,
 714                                     bInclude12,bInclude13,bInclude14);
 715 }
 716
 717
 718 int
 719 genborn_allvsall_calc_still_radii_sse2_single(t_forcerec *           fr,
 720                                               t_mdatoms *            mdatoms,
 721                                               gmx_genborn_t *        born,
 722                                               gmx_localtop_t *       top,
 723                                               real *                 x,
 724                                               t_commrec *            cr,
 725                                               void *                 paadata)
 726 {
 727         gmx_allvsallgb2_data_t *aadata;
 728         int        natoms;
 729         int        ni0,ni1;
 730         int        nj0,nj1,nj2,nj3;
 731         int        i,j,k,n;
 732     int *      mask;
 733     int *      pmask0;
 734     int *      pmask1;
 735     int *      pmask2;
 736     int *      pmask3;
 737     int *      emask0;
 738     int *      emask1;
 739     int *      emask2;
 740     int *      emask3;
 741     real       ix,iy,iz;
 742     real       jx,jy,jz;
 743     real       dx,dy,dz;
 744     real       rsq,rinv;
 745     real       gpi,rai,vai;
 746     real       prod_ai;
 747     real       irsq,idr4,idr6;
 748     real       raj,rvdw,ratio;
 749     real       vaj,ccf,dccf,theta,cosq;
 750     real       term,prod,icf4,icf6,gpi2,factor,sinq;
 751     real *     gb_radius;
 752     real *     vsolv;
 753     real *     work;
 754     real       tmpsum[4];
 755     real *     x_align;
 756     real *     y_align;
 757     real *     z_align;
 758     int *      jindex;
 759     real *     dadx;
 760
 761     __m128     ix_SSE0,iy_SSE0,iz_SSE0;
 762     __m128     ix_SSE1,iy_SSE1,iz_SSE1;
 763     __m128     ix_SSE2,iy_SSE2,iz_SSE2;
 764     __m128     ix_SSE3,iy_SSE3,iz_SSE3;
 765     __m128     gpi_SSE0,rai_SSE0,prod_ai_SSE0;
 766     __m128     gpi_SSE1,rai_SSE1,prod_ai_SSE1;
 767     __m128     gpi_SSE2,rai_SSE2,prod_ai_SSE2;
 768     __m128     gpi_SSE3,rai_SSE3,prod_ai_SSE3;
 769     __m128     imask_SSE0,jmask_SSE0;
 770     __m128     imask_SSE1,jmask_SSE1;
 771     __m128     imask_SSE2,jmask_SSE2;
 772     __m128     imask_SSE3,jmask_SSE3;
 773     __m128     jx_SSE,jy_SSE,jz_SSE;
 774     __m128     dx_SSE0,dy_SSE0,dz_SSE0;
 775     __m128     dx_SSE1,dy_SSE1,dz_SSE1;
 776     __m128     dx_SSE2,dy_SSE2,dz_SSE2;
 777     __m128     dx_SSE3,dy_SSE3,dz_SSE3;
 778     __m128     rsq_SSE0,rinv_SSE0,irsq_SSE0,idr4_SSE0,idr6_SSE0;
 779     __m128     rsq_SSE1,rinv_SSE1,irsq_SSE1,idr4_SSE1,idr6_SSE1;
 780     __m128     rsq_SSE2,rinv_SSE2,irsq_SSE2,idr4_SSE2,idr6_SSE2;
 781     __m128     rsq_SSE3,rinv_SSE3,irsq_SSE3,idr4_SSE3,idr6_SSE3;
 782     __m128     raj_SSE,vaj_SSE,prod_SSE;
 783     __m128     rvdw_SSE0,ratio_SSE0;
 784     __m128     rvdw_SSE1,ratio_SSE1;
 785     __m128     rvdw_SSE2,ratio_SSE2;
 786     __m128     rvdw_SSE3,ratio_SSE3;
 787     __m128     theta_SSE0,sinq_SSE0,cosq_SSE0,term_SSE0;
 788     __m128     theta_SSE1,sinq_SSE1,cosq_SSE1,term_SSE1;
 789     __m128     theta_SSE2,sinq_SSE2,cosq_SSE2,term_SSE2;
 790     __m128     theta_SSE3,sinq_SSE3,cosq_SSE3,term_SSE3;
 791     __m128     ccf_SSE0,dccf_SSE0;
 792     __m128     ccf_SSE1,dccf_SSE1;
 793     __m128     ccf_SSE2,dccf_SSE2;
 794     __m128     ccf_SSE3,dccf_SSE3;
 795     __m128     icf4_SSE0,icf6_SSE0;
 796     __m128     icf4_SSE1,icf6_SSE1;
 797     __m128     icf4_SSE2,icf6_SSE2;
 798     __m128     icf4_SSE3,icf6_SSE3;
 799     __m128     half_SSE,one_SSE,two_SSE,four_SSE;
 800     __m128     still_p4_SSE,still_p5inv_SSE,still_pip5_SSE;
 801
 802     natoms              = mdatoms->nr;
 803         ni0                 = (mdatoms->start/SIMD_WIDTH)*SIMD_WIDTH;
 804         ni1                 = mdatoms->start+mdatoms->homenr;
 805
 806     n = 0;
 807
 808     aadata = *((gmx_allvsallgb2_data_t **)paadata);
 809
 810
 811         if(aadata==NULL)
 812         {
 813                 genborn_allvsall_setup(&aadata,top,born,mdatoms,0.0,
 814                                egbSTILL,FALSE,FALSE,TRUE);
 815         *((gmx_allvsallgb2_data_t **)paadata) = aadata;
 816         }
 817
 818     x_align = aadata->x_align;
 819         y_align = aadata->y_align;
 820         z_align = aadata->z_align;
 821
 822     gb_radius = aadata->gb_radius;
 823     vsolv     = aadata->workparam;
 824     work      = aadata->work;
 825     jindex    = aadata->jindex_gb;
 826     dadx      = fr->dadx;
 827
 828     still_p4_SSE    = _mm_set1_ps(STILL_P4);
 829     still_p5inv_SSE = _mm_set1_ps(STILL_P5INV);
 830     still_pip5_SSE  = _mm_set1_ps(STILL_PIP5);
 831     half_SSE        = _mm_set1_ps(0.5);
 832     one_SSE         = _mm_set1_ps(1.0);
 833     two_SSE         = _mm_set1_ps(2.0);
 834     four_SSE        = _mm_set1_ps(4.0);
 835
 836     /* This will be summed, so it has to extend to natoms + buffer */
 837     for(i=0;i<natoms+1+natoms/2;i++)
 838     {
 839         work[i] = 0;
 840     }
 841
 842         for(i=ni0;i<ni1+1+natoms/2;i++)
 843         {
 844         k = i%natoms;
 845                 x_align[i]  = x[3*k];
 846                 y_align[i]  = x[3*k+1];
 847                 z_align[i]  = x[3*k+2];
 848         work[i]     = 0;
 849     }
 850
 851
 852         for(i=ni0; i<ni1; i+=UNROLLI)
 853         {
 854                 /* We assume shifts are NOT used for all-vs-all interactions */
 855
 856                 /* Load i atom data */
 857                 ix_SSE0          = _mm_load1_ps(x_align+i);
 858                 iy_SSE0          = _mm_load1_ps(y_align+i);
 859                 iz_SSE0          = _mm_load1_ps(z_align+i);
 860                 ix_SSE1          = _mm_load1_ps(x_align+i+1);
 861                 iy_SSE1          = _mm_load1_ps(y_align+i+1);
 862                 iz_SSE1          = _mm_load1_ps(z_align+i+1);
 863                 ix_SSE2          = _mm_load1_ps(x_align+i+2);
 864                 iy_SSE2          = _mm_load1_ps(y_align+i+2);
 865                 iz_SSE2          = _mm_load1_ps(z_align+i+2);
 866                 ix_SSE3          = _mm_load1_ps(x_align+i+3);
 867                 iy_SSE3          = _mm_load1_ps(y_align+i+3);
 868                 iz_SSE3          = _mm_load1_ps(z_align+i+3);
 869
 870         gpi_SSE0         = _mm_setzero_ps();
 871         gpi_SSE1         = _mm_setzero_ps();
 872         gpi_SSE2         = _mm_setzero_ps();
 873         gpi_SSE3         = _mm_setzero_ps();
 874
 875         rai_SSE0         = _mm_load1_ps(gb_radius+i);
 876         rai_SSE1         = _mm_load1_ps(gb_radius+i+1);
 877         rai_SSE2         = _mm_load1_ps(gb_radius+i+2);
 878         rai_SSE3         = _mm_load1_ps(gb_radius+i+3);
 879
 880         prod_ai_SSE0     = _mm_set1_ps(STILL_P4*vsolv[i]);
 881         prod_ai_SSE1     = _mm_set1_ps(STILL_P4*vsolv[i+1]);
 882         prod_ai_SSE2     = _mm_set1_ps(STILL_P4*vsolv[i+2]);
 883         prod_ai_SSE3     = _mm_set1_ps(STILL_P4*vsolv[i+3]);
 884
 885                 /* Load limits for loop over neighbors */
 886                 nj0              = jindex[4*i];
 887                 nj1              = jindex[4*i+1];
 888                 nj2              = jindex[4*i+2];
 889                 nj3              = jindex[4*i+3];
 890
 891         pmask0           = aadata->prologue_mask_gb[i];
 892         pmask1           = aadata->prologue_mask_gb[i+1];
 893         pmask2           = aadata->prologue_mask_gb[i+2];
 894         pmask3           = aadata->prologue_mask_gb[i+3];
 895         emask0           = aadata->epilogue_mask[i];
 896         emask1           = aadata->epilogue_mask[i+1];
 897         emask2           = aadata->epilogue_mask[i+2];
 898         emask3           = aadata->epilogue_mask[i+3];
 899
 900         imask_SSE0        = _mm_load1_ps((real *)(aadata->imask+i));
 901         imask_SSE1        = _mm_load1_ps((real *)(aadata->imask+i+1));
 902         imask_SSE2        = _mm_load1_ps((real *)(aadata->imask+i+2));
 903         imask_SSE3        = _mm_load1_ps((real *)(aadata->imask+i+3));
 904
 905         /* Prologue part, including exclusion mask */
 906         for(j=nj0; j<nj1; j+=UNROLLJ)
 907         {
 908             jmask_SSE0 = _mm_load_ps((real *)pmask0);
 909             jmask_SSE1 = _mm_load_ps((real *)pmask1);
 910             jmask_SSE2 = _mm_load_ps((real *)pmask2);
 911             jmask_SSE3 = _mm_load_ps((real *)pmask3);
 912             pmask0 += UNROLLJ;
 913             pmask1 += UNROLLJ;
 914             pmask2 += UNROLLJ;
 915             pmask3 += UNROLLJ;
 916
 917             /* load j atom coordinates */
 918             jx_SSE            = _mm_load_ps(x_align+j);
 919             jy_SSE            = _mm_load_ps(y_align+j);
 920             jz_SSE            = _mm_load_ps(z_align+j);
 921
 922             /* Calculate distance */
 923             dx_SSE0            = _mm_sub_ps(ix_SSE0,jx_SSE);
 924             dy_SSE0            = _mm_sub_ps(iy_SSE0,jy_SSE);
 925             dz_SSE0            = _mm_sub_ps(iz_SSE0,jz_SSE);
 926             dx_SSE1            = _mm_sub_ps(ix_SSE1,jx_SSE);
 927             dy_SSE1            = _mm_sub_ps(iy_SSE1,jy_SSE);
 928             dz_SSE1            = _mm_sub_ps(iz_SSE1,jz_SSE);
 929             dx_SSE2            = _mm_sub_ps(ix_SSE2,jx_SSE);
 930             dy_SSE2            = _mm_sub_ps(iy_SSE2,jy_SSE);
 931             dz_SSE2            = _mm_sub_ps(iz_SSE2,jz_SSE);
 932             dx_SSE3            = _mm_sub_ps(ix_SSE3,jx_SSE);
 933             dy_SSE3            = _mm_sub_ps(iy_SSE3,jy_SSE);
 934             dz_SSE3            = _mm_sub_ps(iz_SSE3,jz_SSE);
 935
 936             /* rsq = dx*dx+dy*dy+dz*dz */
 937             rsq_SSE0           = gmx_mm_calc_rsq_ps(dx_SSE0,dy_SSE0,dz_SSE0);
 938             rsq_SSE1           = gmx_mm_calc_rsq_ps(dx_SSE1,dy_SSE1,dz_SSE1);
 939             rsq_SSE2           = gmx_mm_calc_rsq_ps(dx_SSE2,dy_SSE2,dz_SSE2);
 940             rsq_SSE3           = gmx_mm_calc_rsq_ps(dx_SSE3,dy_SSE3,dz_SSE3);
 941
 942             /* Combine masks */
 943             jmask_SSE0         = _mm_and_ps(jmask_SSE0,imask_SSE0);
 944             jmask_SSE1         = _mm_and_ps(jmask_SSE1,imask_SSE1);
 945             jmask_SSE2         = _mm_and_ps(jmask_SSE2,imask_SSE2);
 946             jmask_SSE3         = _mm_and_ps(jmask_SSE3,imask_SSE3);
 947
 948             /* Calculate 1/r and 1/r2 */
 949             rinv_SSE0          = gmx_mm_invsqrt_ps(rsq_SSE0);
 950             rinv_SSE1          = gmx_mm_invsqrt_ps(rsq_SSE1);
 951             rinv_SSE2          = gmx_mm_invsqrt_ps(rsq_SSE2);
 952             rinv_SSE3          = gmx_mm_invsqrt_ps(rsq_SSE3);
 953
 954             /* Apply mask */
 955             rinv_SSE0          = _mm_and_ps(rinv_SSE0,jmask_SSE0);
 956             rinv_SSE1          = _mm_and_ps(rinv_SSE1,jmask_SSE1);
 957             rinv_SSE2          = _mm_and_ps(rinv_SSE2,jmask_SSE2);
 958             rinv_SSE3          = _mm_and_ps(rinv_SSE3,jmask_SSE3);
 959
 960             irsq_SSE0          = _mm_mul_ps(rinv_SSE0,rinv_SSE0);
 961             irsq_SSE1          = _mm_mul_ps(rinv_SSE1,rinv_SSE1);
 962             irsq_SSE2          = _mm_mul_ps(rinv_SSE2,rinv_SSE2);
 963             irsq_SSE3          = _mm_mul_ps(rinv_SSE3,rinv_SSE3);
 964             idr4_SSE0          = _mm_mul_ps(irsq_SSE0,irsq_SSE0);
 965             idr4_SSE1          = _mm_mul_ps(irsq_SSE1,irsq_SSE1);
 966             idr4_SSE2          = _mm_mul_ps(irsq_SSE2,irsq_SSE2);
 967             idr4_SSE3          = _mm_mul_ps(irsq_SSE3,irsq_SSE3);
 968             idr6_SSE0          = _mm_mul_ps(idr4_SSE0,irsq_SSE0);
 969             idr6_SSE1          = _mm_mul_ps(idr4_SSE1,irsq_SSE1);
 970             idr6_SSE2          = _mm_mul_ps(idr4_SSE2,irsq_SSE2);
 971             idr6_SSE3          = _mm_mul_ps(idr4_SSE3,irsq_SSE3);
 972
 973             raj_SSE            = _mm_load_ps(gb_radius+j);
 974             vaj_SSE            = _mm_load_ps(vsolv+j);
 975
 976             rvdw_SSE0          = _mm_add_ps(rai_SSE0,raj_SSE);
 977             rvdw_SSE1          = _mm_add_ps(rai_SSE1,raj_SSE);
 978             rvdw_SSE2          = _mm_add_ps(rai_SSE2,raj_SSE);
 979             rvdw_SSE3          = _mm_add_ps(rai_SSE3,raj_SSE);
 980
 981             ratio_SSE0         = _mm_mul_ps(rsq_SSE0, gmx_mm_inv_ps( _mm_mul_ps(rvdw_SSE0,rvdw_SSE0)));
 982             ratio_SSE1         = _mm_mul_ps(rsq_SSE1, gmx_mm_inv_ps( _mm_mul_ps(rvdw_SSE1,rvdw_SSE1)));
 983             ratio_SSE2         = _mm_mul_ps(rsq_SSE2, gmx_mm_inv_ps( _mm_mul_ps(rvdw_SSE2,rvdw_SSE2)));
 984             ratio_SSE3         = _mm_mul_ps(rsq_SSE3, gmx_mm_inv_ps( _mm_mul_ps(rvdw_SSE3,rvdw_SSE3)));
 985
 986             ratio_SSE0         = _mm_min_ps(ratio_SSE0,still_p5inv_SSE);
 987             ratio_SSE1         = _mm_min_ps(ratio_SSE1,still_p5inv_SSE);
 988             ratio_SSE2         = _mm_min_ps(ratio_SSE2,still_p5inv_SSE);
 989             ratio_SSE3         = _mm_min_ps(ratio_SSE3,still_p5inv_SSE);
 990             theta_SSE0         = _mm_mul_ps(ratio_SSE0,still_pip5_SSE);
 991             theta_SSE1         = _mm_mul_ps(ratio_SSE1,still_pip5_SSE);
 992             theta_SSE2         = _mm_mul_ps(ratio_SSE2,still_pip5_SSE);
 993             theta_SSE3         = _mm_mul_ps(ratio_SSE3,still_pip5_SSE);
 994             gmx_mm_sincos_ps(theta_SSE0,&sinq_SSE0,&cosq_SSE0);
 995             gmx_mm_sincos_ps(theta_SSE1,&sinq_SSE1,&cosq_SSE1);
 996             gmx_mm_sincos_ps(theta_SSE2,&sinq_SSE2,&cosq_SSE2);
 997             gmx_mm_sincos_ps(theta_SSE3,&sinq_SSE3,&cosq_SSE3);
 998             term_SSE0          = _mm_mul_ps(half_SSE,_mm_sub_ps(one_SSE,cosq_SSE0));
 999             term_SSE1          = _mm_mul_ps(half_SSE,_mm_sub_ps(one_SSE,cosq_SSE1));
1000             term_SSE2          = _mm_mul_ps(half_SSE,_mm_sub_ps(one_SSE,cosq_SSE2));
1001             term_SSE3          = _mm_mul_ps(half_SSE,_mm_sub_ps(one_SSE,cosq_SSE3));
1002             ccf_SSE0           = _mm_mul_ps(term_SSE0,term_SSE0);
1003             ccf_SSE1           = _mm_mul_ps(term_SSE1,term_SSE1);
1004             ccf_SSE2           = _mm_mul_ps(term_SSE2,term_SSE2);
1005             ccf_SSE3           = _mm_mul_ps(term_SSE3,term_SSE3);
1006             dccf_SSE0          = _mm_mul_ps(_mm_mul_ps(two_SSE,term_SSE0),
1007                                             _mm_mul_ps(sinq_SSE0,theta_SSE0));
1008             dccf_SSE1          = _mm_mul_ps(_mm_mul_ps(two_SSE,term_SSE1),
1009                                             _mm_mul_ps(sinq_SSE1,theta_SSE1));
1010             dccf_SSE2          = _mm_mul_ps(_mm_mul_ps(two_SSE,term_SSE2),
1011                                             _mm_mul_ps(sinq_SSE2,theta_SSE2));
1012             dccf_SSE3          = _mm_mul_ps(_mm_mul_ps(two_SSE,term_SSE3),
1013                                             _mm_mul_ps(sinq_SSE3,theta_SSE3));
1014
1015             prod_SSE           = _mm_mul_ps(still_p4_SSE,vaj_SSE);
1016             icf4_SSE0          = _mm_mul_ps(ccf_SSE0,idr4_SSE0);
1017             icf4_SSE1          = _mm_mul_ps(ccf_SSE1,idr4_SSE1);
1018             icf4_SSE2          = _mm_mul_ps(ccf_SSE2,idr4_SSE2);
1019             icf4_SSE3          = _mm_mul_ps(ccf_SSE3,idr4_SSE3);
1020             icf6_SSE0          = _mm_mul_ps( _mm_sub_ps( _mm_mul_ps(four_SSE,ccf_SSE0),dccf_SSE0), idr6_SSE0);
1021             icf6_SSE1          = _mm_mul_ps( _mm_sub_ps( _mm_mul_ps(four_SSE,ccf_SSE1),dccf_SSE1), idr6_SSE1);
1022             icf6_SSE2          = _mm_mul_ps( _mm_sub_ps( _mm_mul_ps(four_SSE,ccf_SSE2),dccf_SSE2), idr6_SSE2);
1023             icf6_SSE3          = _mm_mul_ps( _mm_sub_ps( _mm_mul_ps(four_SSE,ccf_SSE3),dccf_SSE3), idr6_SSE3);
1024
1025             _mm_store_ps(work+j , _mm_add_ps(_mm_load_ps(work+j),
1026                                              gmx_mm_sum4_ps(_mm_mul_ps(prod_ai_SSE0,icf4_SSE0),
1027                                                          _mm_mul_ps(prod_ai_SSE1,icf4_SSE1),
1028                                                          _mm_mul_ps(prod_ai_SSE2,icf4_SSE2),
1029                                                          _mm_mul_ps(prod_ai_SSE3,icf4_SSE3))));
1030
1031             gpi_SSE0           = _mm_add_ps(gpi_SSE0, _mm_mul_ps(prod_SSE,icf4_SSE0));
1032             gpi_SSE1           = _mm_add_ps(gpi_SSE1, _mm_mul_ps(prod_SSE,icf4_SSE1));
1033             gpi_SSE2           = _mm_add_ps(gpi_SSE2, _mm_mul_ps(prod_SSE,icf4_SSE2));
1034             gpi_SSE3           = _mm_add_ps(gpi_SSE3, _mm_mul_ps(prod_SSE,icf4_SSE3));
1035
1036             /* Save ai->aj and aj->ai chain rule terms */
1037             _mm_store_ps(dadx,_mm_mul_ps(prod_SSE,icf6_SSE0));
1038             dadx+=4;
1039             _mm_store_ps(dadx,_mm_mul_ps(prod_SSE,icf6_SSE1));
1040             dadx+=4;
1041             _mm_store_ps(dadx,_mm_mul_ps(prod_SSE,icf6_SSE2));
1042             dadx+=4;
1043             _mm_store_ps(dadx,_mm_mul_ps(prod_SSE,icf6_SSE3));
1044             dadx+=4;
1045
1046             _mm_store_ps(dadx,_mm_mul_ps(prod_ai_SSE0,icf6_SSE0));
1047             dadx+=4;
1048             _mm_store_ps(dadx,_mm_mul_ps(prod_ai_SSE1,icf6_SSE1));
1049             dadx+=4;
1050             _mm_store_ps(dadx,_mm_mul_ps(prod_ai_SSE2,icf6_SSE2));
1051             dadx+=4;
1052             _mm_store_ps(dadx,_mm_mul_ps(prod_ai_SSE3,icf6_SSE3));
1053             dadx+=4;
1054         }
1055
1056         /* Main part, no exclusions */
1057         for(j=nj1; j<nj2; j+=UNROLLJ)
1058         {
1059             /* load j atom coordinates */
1060             jx_SSE            = _mm_load_ps(x_align+j);
1061             jy_SSE            = _mm_load_ps(y_align+j);
1062             jz_SSE            = _mm_load_ps(z_align+j);
1063
1064             /* Calculate distance */
1065             dx_SSE0            = _mm_sub_ps(ix_SSE0,jx_SSE);
1066             dy_SSE0            = _mm_sub_ps(iy_SSE0,jy_SSE);
1067             dz_SSE0            = _mm_sub_ps(iz_SSE0,jz_SSE);
1068             dx_SSE1            = _mm_sub_ps(ix_SSE1,jx_SSE);
1069             dy_SSE1            = _mm_sub_ps(iy_SSE1,jy_SSE);
1070             dz_SSE1            = _mm_sub_ps(iz_SSE1,jz_SSE);
1071             dx_SSE2            = _mm_sub_ps(ix_SSE2,jx_SSE);
1072             dy_SSE2            = _mm_sub_ps(iy_SSE2,jy_SSE);
1073             dz_SSE2            = _mm_sub_ps(iz_SSE2,jz_SSE);
1074             dx_SSE3            = _mm_sub_ps(ix_SSE3,jx_SSE);
1075             dy_SSE3            = _mm_sub_ps(iy_SSE3,jy_SSE);
1076             dz_SSE3            = _mm_sub_ps(iz_SSE3,jz_SSE);
1077
1078             /* rsq = dx*dx+dy*dy+dz*dz */
1079             rsq_SSE0           = gmx_mm_calc_rsq_ps(dx_SSE0,dy_SSE0,dz_SSE0);
1080             rsq_SSE1           = gmx_mm_calc_rsq_ps(dx_SSE1,dy_SSE1,dz_SSE1);
1081             rsq_SSE2           = gmx_mm_calc_rsq_ps(dx_SSE2,dy_SSE2,dz_SSE2);
1082             rsq_SSE3           = gmx_mm_calc_rsq_ps(dx_SSE3,dy_SSE3,dz_SSE3);
1083
1084             /* Calculate 1/r and 1/r2 */
1085             rinv_SSE0          = gmx_mm_invsqrt_ps(rsq_SSE0);
1086             rinv_SSE1          = gmx_mm_invsqrt_ps(rsq_SSE1);
1087             rinv_SSE2          = gmx_mm_invsqrt_ps(rsq_SSE2);
1088             rinv_SSE3          = gmx_mm_invsqrt_ps(rsq_SSE3);
1089
1090             /* Apply mask */
1091             rinv_SSE0          = _mm_and_ps(rinv_SSE0,imask_SSE0);
1092             rinv_SSE1          = _mm_and_ps(rinv_SSE1,imask_SSE1);
1093             rinv_SSE2          = _mm_and_ps(rinv_SSE2,imask_SSE2);
1094             rinv_SSE3          = _mm_and_ps(rinv_SSE3,imask_SSE3);
1095
1096             irsq_SSE0          = _mm_mul_ps(rinv_SSE0,rinv_SSE0);
1097             irsq_SSE1          = _mm_mul_ps(rinv_SSE1,rinv_SSE1);
1098             irsq_SSE2          = _mm_mul_ps(rinv_SSE2,rinv_SSE2);
1099             irsq_SSE3          = _mm_mul_ps(rinv_SSE3,rinv_SSE3);
1100             idr4_SSE0          = _mm_mul_ps(irsq_SSE0,irsq_SSE0);
1101             idr4_SSE1          = _mm_mul_ps(irsq_SSE1,irsq_SSE1);
1102             idr4_SSE2          = _mm_mul_ps(irsq_SSE2,irsq_SSE2);
1103             idr4_SSE3          = _mm_mul_ps(irsq_SSE3,irsq_SSE3);
1104             idr6_SSE0          = _mm_mul_ps(idr4_SSE0,irsq_SSE0);
1105             idr6_SSE1          = _mm_mul_ps(idr4_SSE1,irsq_SSE1);
1106             idr6_SSE2          = _mm_mul_ps(idr4_SSE2,irsq_SSE2);
1107             idr6_SSE3          = _mm_mul_ps(idr4_SSE3,irsq_SSE3);
1108
1109             raj_SSE            = _mm_load_ps(gb_radius+j);
1110
1111             rvdw_SSE0          = _mm_add_ps(rai_SSE0,raj_SSE);
1112             rvdw_SSE1          = _mm_add_ps(rai_SSE1,raj_SSE);
1113             rvdw_SSE2          = _mm_add_ps(rai_SSE2,raj_SSE);
1114             rvdw_SSE3          = _mm_add_ps(rai_SSE3,raj_SSE);
1115             vaj_SSE            = _mm_load_ps(vsolv+j);
1116
1117             ratio_SSE0         = _mm_mul_ps(rsq_SSE0, gmx_mm_inv_ps( _mm_mul_ps(rvdw_SSE0,rvdw_SSE0)));
1118             ratio_SSE1         = _mm_mul_ps(rsq_SSE1, gmx_mm_inv_ps( _mm_mul_ps(rvdw_SSE1,rvdw_SSE1)));
1119             ratio_SSE2         = _mm_mul_ps(rsq_SSE2, gmx_mm_inv_ps( _mm_mul_ps(rvdw_SSE2,rvdw_SSE2)));
1120             ratio_SSE3         = _mm_mul_ps(rsq_SSE3, gmx_mm_inv_ps( _mm_mul_ps(rvdw_SSE3,rvdw_SSE3)));
1121
1122             ratio_SSE0         = _mm_min_ps(ratio_SSE0,still_p5inv_SSE);
1123             ratio_SSE1         = _mm_min_ps(ratio_SSE1,still_p5inv_SSE);
1124             ratio_SSE2         = _mm_min_ps(ratio_SSE2,still_p5inv_SSE);
1125             ratio_SSE3         = _mm_min_ps(ratio_SSE3,still_p5inv_SSE);
1126             theta_SSE0         = _mm_mul_ps(ratio_SSE0,still_pip5_SSE);
1127             theta_SSE1         = _mm_mul_ps(ratio_SSE1,still_pip5_SSE);
1128             theta_SSE2         = _mm_mul_ps(ratio_SSE2,still_pip5_SSE);
1129             theta_SSE3         = _mm_mul_ps(ratio_SSE3,still_pip5_SSE);
1130             gmx_mm_sincos_ps(theta_SSE0,&sinq_SSE0,&cosq_SSE0);
1131             gmx_mm_sincos_ps(theta_SSE1,&sinq_SSE1,&cosq_SSE1);
1132             gmx_mm_sincos_ps(theta_SSE2,&sinq_SSE2,&cosq_SSE2);
1133             gmx_mm_sincos_ps(theta_SSE3,&sinq_SSE3,&cosq_SSE3);
1134             term_SSE0          = _mm_mul_ps(half_SSE,_mm_sub_ps(one_SSE,cosq_SSE0));
1135             term_SSE1          = _mm_mul_ps(half_SSE,_mm_sub_ps(one_SSE,cosq_SSE1));
1136             term_SSE2          = _mm_mul_ps(half_SSE,_mm_sub_ps(one_SSE,cosq_SSE2));
1137             term_SSE3          = _mm_mul_ps(half_SSE,_mm_sub_ps(one_SSE,cosq_SSE3));
1138             ccf_SSE0           = _mm_mul_ps(term_SSE0,term_SSE0);
1139             ccf_SSE1           = _mm_mul_ps(term_SSE1,term_SSE1);
1140             ccf_SSE2           = _mm_mul_ps(term_SSE2,term_SSE2);
1141             ccf_SSE3           = _mm_mul_ps(term_SSE3,term_SSE3);
1142             dccf_SSE0          = _mm_mul_ps(_mm_mul_ps(two_SSE,term_SSE0),
1143                                             _mm_mul_ps(sinq_SSE0,theta_SSE0));
1144             dccf_SSE1          = _mm_mul_ps(_mm_mul_ps(two_SSE,term_SSE1),
1145                                             _mm_mul_ps(sinq_SSE1,theta_SSE1));
1146             dccf_SSE2          = _mm_mul_ps(_mm_mul_ps(two_SSE,term_SSE2),
1147                                             _mm_mul_ps(sinq_SSE2,theta_SSE2));
1148             dccf_SSE3          = _mm_mul_ps(_mm_mul_ps(two_SSE,term_SSE3),
1149                                             _mm_mul_ps(sinq_SSE3,theta_SSE3));
1150
1151             prod_SSE           = _mm_mul_ps(still_p4_SSE,vaj_SSE );
1152             icf4_SSE0          = _mm_mul_ps(ccf_SSE0,idr4_SSE0);
1153             icf4_SSE1          = _mm_mul_ps(ccf_SSE1,idr4_SSE1);
1154             icf4_SSE2          = _mm_mul_ps(ccf_SSE2,idr4_SSE2);
1155             icf4_SSE3          = _mm_mul_ps(ccf_SSE3,idr4_SSE3);
1156             icf6_SSE0          = _mm_mul_ps( _mm_sub_ps( _mm_mul_ps(four_SSE,ccf_SSE0),dccf_SSE0), idr6_SSE0);
1157             icf6_SSE1          = _mm_mul_ps( _mm_sub_ps( _mm_mul_ps(four_SSE,ccf_SSE1),dccf_SSE1), idr6_SSE1);
1158             icf6_SSE2          = _mm_mul_ps( _mm_sub_ps( _mm_mul_ps(four_SSE,ccf_SSE2),dccf_SSE2), idr6_SSE2);
1159             icf6_SSE3          = _mm_mul_ps( _mm_sub_ps( _mm_mul_ps(four_SSE,ccf_SSE3),dccf_SSE3), idr6_SSE3);
1160
1161             _mm_store_ps(work+j , _mm_add_ps(_mm_load_ps(work+j),
1162                                              gmx_mm_sum4_ps(_mm_mul_ps(prod_ai_SSE0,icf4_SSE0),
1163                                                          _mm_mul_ps(prod_ai_SSE1,icf4_SSE1),
1164                                                          _mm_mul_ps(prod_ai_SSE2,icf4_SSE2),
1165                                                          _mm_mul_ps(prod_ai_SSE3,icf4_SSE3))));
1166
1167             gpi_SSE0           = _mm_add_ps(gpi_SSE0, _mm_mul_ps(prod_SSE,icf4_SSE0));
1168             gpi_SSE1           = _mm_add_ps(gpi_SSE1, _mm_mul_ps(prod_SSE,icf4_SSE1));
1169             gpi_SSE2           = _mm_add_ps(gpi_SSE2, _mm_mul_ps(prod_SSE,icf4_SSE2));
1170             gpi_SSE3           = _mm_add_ps(gpi_SSE3, _mm_mul_ps(prod_SSE,icf4_SSE3));
1171
1172             /* Save ai->aj and aj->ai chain rule terms */
1173             _mm_store_ps(dadx,_mm_mul_ps(prod_SSE,icf6_SSE0));
1174             dadx+=4;
1175             _mm_store_ps(dadx,_mm_mul_ps(prod_SSE,icf6_SSE1));
1176             dadx+=4;
1177             _mm_store_ps(dadx,_mm_mul_ps(prod_SSE,icf6_SSE2));
1178             dadx+=4;
1179             _mm_store_ps(dadx,_mm_mul_ps(prod_SSE,icf6_SSE3));
1180             dadx+=4;
1181
1182             _mm_store_ps(dadx,_mm_mul_ps(prod_ai_SSE0,icf6_SSE0));
1183             dadx+=4;
1184             _mm_store_ps(dadx,_mm_mul_ps(prod_ai_SSE1,icf6_SSE1));
1185             dadx+=4;
1186             _mm_store_ps(dadx,_mm_mul_ps(prod_ai_SSE2,icf6_SSE2));
1187             dadx+=4;
1188             _mm_store_ps(dadx,_mm_mul_ps(prod_ai_SSE3,icf6_SSE3));
1189             dadx+=4;
1190         }
1191         /* Epilogue part, including exclusion mask */
1192         for(j=nj2; j<nj3; j+=UNROLLJ)
1193         {
1194             jmask_SSE0 = _mm_load_ps((real *)emask0);
1195             jmask_SSE1 = _mm_load_ps((real *)emask1);
1196             jmask_SSE2 = _mm_load_ps((real *)emask2);
1197             jmask_SSE3 = _mm_load_ps((real *)emask3);
1198             emask0 += UNROLLJ;
1199             emask1 += UNROLLJ;
1200             emask2 += UNROLLJ;
1201             emask3 += UNROLLJ;
1202
1203             /* load j atom coordinates */
1204             jx_SSE            = _mm_load_ps(x_align+j);
1205             jy_SSE            = _mm_load_ps(y_align+j);
1206             jz_SSE            = _mm_load_ps(z_align+j);
1207
1208             /* Calculate distance */
1209             dx_SSE0            = _mm_sub_ps(ix_SSE0,jx_SSE);
1210             dy_SSE0            = _mm_sub_ps(iy_SSE0,jy_SSE);
1211             dz_SSE0            = _mm_sub_ps(iz_SSE0,jz_SSE);
1212             dx_SSE1            = _mm_sub_ps(ix_SSE1,jx_SSE);
1213             dy_SSE1            = _mm_sub_ps(iy_SSE1,jy_SSE);
1214             dz_SSE1            = _mm_sub_ps(iz_SSE1,jz_SSE);
1215             dx_SSE2            = _mm_sub_ps(ix_SSE2,jx_SSE);
1216             dy_SSE2            = _mm_sub_ps(iy_SSE2,jy_SSE);
1217             dz_SSE2            = _mm_sub_ps(iz_SSE2,jz_SSE);
1218             dx_SSE3            = _mm_sub_ps(ix_SSE3,jx_SSE);
1219             dy_SSE3            = _mm_sub_ps(iy_SSE3,jy_SSE);
1220             dz_SSE3            = _mm_sub_ps(iz_SSE3,jz_SSE);
1221
1222             /* rsq = dx*dx+dy*dy+dz*dz */
1223             rsq_SSE0           = gmx_mm_calc_rsq_ps(dx_SSE0,dy_SSE0,dz_SSE0);
1224             rsq_SSE1           = gmx_mm_calc_rsq_ps(dx_SSE1,dy_SSE1,dz_SSE1);
1225             rsq_SSE2           = gmx_mm_calc_rsq_ps(dx_SSE2,dy_SSE2,dz_SSE2);
1226             rsq_SSE3           = gmx_mm_calc_rsq_ps(dx_SSE3,dy_SSE3,dz_SSE3);
1227
1228             /* Combine masks */
1229             jmask_SSE0         = _mm_and_ps(jmask_SSE0,imask_SSE0);
1230             jmask_SSE1         = _mm_and_ps(jmask_SSE1,imask_SSE1);
1231             jmask_SSE2         = _mm_and_ps(jmask_SSE2,imask_SSE2);
1232             jmask_SSE3         = _mm_and_ps(jmask_SSE3,imask_SSE3);
1233
1234             /* Calculate 1/r and 1/r2 */
1235             rinv_SSE0          = gmx_mm_invsqrt_ps(rsq_SSE0);
1236             rinv_SSE1          = gmx_mm_invsqrt_ps(rsq_SSE1);
1237             rinv_SSE2          = gmx_mm_invsqrt_ps(rsq_SSE2);
1238             rinv_SSE3          = gmx_mm_invsqrt_ps(rsq_SSE3);
1239
1240             /* Apply mask */
1241             rinv_SSE0          = _mm_and_ps(rinv_SSE0,jmask_SSE0);
1242             rinv_SSE1          = _mm_and_ps(rinv_SSE1,jmask_SSE1);
1243             rinv_SSE2          = _mm_and_ps(rinv_SSE2,jmask_SSE2);
1244             rinv_SSE3          = _mm_and_ps(rinv_SSE3,jmask_SSE3);
1245
1246             irsq_SSE0          = _mm_mul_ps(rinv_SSE0,rinv_SSE0);
1247             irsq_SSE1          = _mm_mul_ps(rinv_SSE1,rinv_SSE1);
1248             irsq_SSE2          = _mm_mul_ps(rinv_SSE2,rinv_SSE2);
1249             irsq_SSE3          = _mm_mul_ps(rinv_SSE3,rinv_SSE3);
1250             idr4_SSE0          = _mm_mul_ps(irsq_SSE0,irsq_SSE0);
1251             idr4_SSE1          = _mm_mul_ps(irsq_SSE1,irsq_SSE1);
1252             idr4_SSE2          = _mm_mul_ps(irsq_SSE2,irsq_SSE2);
1253             idr4_SSE3          = _mm_mul_ps(irsq_SSE3,irsq_SSE3);
1254             idr6_SSE0          = _mm_mul_ps(idr4_SSE0,irsq_SSE0);
1255             idr6_SSE1          = _mm_mul_ps(idr4_SSE1,irsq_SSE1);
1256             idr6_SSE2          = _mm_mul_ps(idr4_SSE2,irsq_SSE2);
1257             idr6_SSE3          = _mm_mul_ps(idr4_SSE3,irsq_SSE3);
1258
1259             raj_SSE            = _mm_load_ps(gb_radius+j);
1260             vaj_SSE            = _mm_load_ps(vsolv+j);
1261
1262             rvdw_SSE0          = _mm_add_ps(rai_SSE0,raj_SSE);
1263             rvdw_SSE1          = _mm_add_ps(rai_SSE1,raj_SSE);
1264             rvdw_SSE2          = _mm_add_ps(rai_SSE2,raj_SSE);
1265             rvdw_SSE3          = _mm_add_ps(rai_SSE3,raj_SSE);
1266
1267             ratio_SSE0         = _mm_mul_ps(rsq_SSE0, gmx_mm_inv_ps( _mm_mul_ps(rvdw_SSE0,rvdw_SSE0)));
1268             ratio_SSE1         = _mm_mul_ps(rsq_SSE1, gmx_mm_inv_ps( _mm_mul_ps(rvdw_SSE1,rvdw_SSE1)));
1269             ratio_SSE2         = _mm_mul_ps(rsq_SSE2, gmx_mm_inv_ps( _mm_mul_ps(rvdw_SSE2,rvdw_SSE2)));
1270             ratio_SSE3         = _mm_mul_ps(rsq_SSE3, gmx_mm_inv_ps( _mm_mul_ps(rvdw_SSE3,rvdw_SSE3)));
1271
1272             ratio_SSE0         = _mm_min_ps(ratio_SSE0,still_p5inv_SSE);
1273             ratio_SSE1         = _mm_min_ps(ratio_SSE1,still_p5inv_SSE);
1274             ratio_SSE2         = _mm_min_ps(ratio_SSE2,still_p5inv_SSE);
1275             ratio_SSE3         = _mm_min_ps(ratio_SSE3,still_p5inv_SSE);
1276             theta_SSE0         = _mm_mul_ps(ratio_SSE0,still_pip5_SSE);
1277             theta_SSE1         = _mm_mul_ps(ratio_SSE1,still_pip5_SSE);
1278             theta_SSE2         = _mm_mul_ps(ratio_SSE2,still_pip5_SSE);
1279             theta_SSE3         = _mm_mul_ps(ratio_SSE3,still_pip5_SSE);
1280             gmx_mm_sincos_ps(theta_SSE0,&sinq_SSE0,&cosq_SSE0);
1281             gmx_mm_sincos_ps(theta_SSE1,&sinq_SSE1,&cosq_SSE1);
1282             gmx_mm_sincos_ps(theta_SSE2,&sinq_SSE2,&cosq_SSE2);
1283             gmx_mm_sincos_ps(theta_SSE3,&sinq_SSE3,&cosq_SSE3);
1284             term_SSE0          = _mm_mul_ps(half_SSE,_mm_sub_ps(one_SSE,cosq_SSE0));
1285             term_SSE1          = _mm_mul_ps(half_SSE,_mm_sub_ps(one_SSE,cosq_SSE1));
1286             term_SSE2          = _mm_mul_ps(half_SSE,_mm_sub_ps(one_SSE,cosq_SSE2));
1287             term_SSE3          = _mm_mul_ps(half_SSE,_mm_sub_ps(one_SSE,cosq_SSE3));
1288             ccf_SSE0           = _mm_mul_ps(term_SSE0,term_SSE0);
1289             ccf_SSE1           = _mm_mul_ps(term_SSE1,term_SSE1);
1290             ccf_SSE2           = _mm_mul_ps(term_SSE2,term_SSE2);
1291             ccf_SSE3           = _mm_mul_ps(term_SSE3,term_SSE3);
1292             dccf_SSE0          = _mm_mul_ps(_mm_mul_ps(two_SSE,term_SSE0),
1293                                             _mm_mul_ps(sinq_SSE0,theta_SSE0));
1294             dccf_SSE1          = _mm_mul_ps(_mm_mul_ps(two_SSE,term_SSE1),
1295                                             _mm_mul_ps(sinq_SSE1,theta_SSE1));
1296             dccf_SSE2          = _mm_mul_ps(_mm_mul_ps(two_SSE,term_SSE2),
1297                                             _mm_mul_ps(sinq_SSE2,theta_SSE2));
1298             dccf_SSE3          = _mm_mul_ps(_mm_mul_ps(two_SSE,term_SSE3),
1299                                             _mm_mul_ps(sinq_SSE3,theta_SSE3));
1300
1301             prod_SSE           = _mm_mul_ps(still_p4_SSE,vaj_SSE);
1302             icf4_SSE0          = _mm_mul_ps(ccf_SSE0,idr4_SSE0);
1303             icf4_SSE1          = _mm_mul_ps(ccf_SSE1,idr4_SSE1);
1304             icf4_SSE2          = _mm_mul_ps(ccf_SSE2,idr4_SSE2);
1305             icf4_SSE3          = _mm_mul_ps(ccf_SSE3,idr4_SSE3);
1306             icf6_SSE0          = _mm_mul_ps( _mm_sub_ps( _mm_mul_ps(four_SSE,ccf_SSE0),dccf_SSE0), idr6_SSE0);
1307             icf6_SSE1          = _mm_mul_ps( _mm_sub_ps( _mm_mul_ps(four_SSE,ccf_SSE1),dccf_SSE1), idr6_SSE1);
1308             icf6_SSE2          = _mm_mul_ps( _mm_sub_ps( _mm_mul_ps(four_SSE,ccf_SSE2),dccf_SSE2), idr6_SSE2);
1309             icf6_SSE3          = _mm_mul_ps( _mm_sub_ps( _mm_mul_ps(four_SSE,ccf_SSE3),dccf_SSE3), idr6_SSE3);
1310
1311             _mm_store_ps(work+j , _mm_add_ps(_mm_load_ps(work+j),
1312                                              gmx_mm_sum4_ps(_mm_mul_ps(prod_ai_SSE0,icf4_SSE0),
1313                                                          _mm_mul_ps(prod_ai_SSE1,icf4_SSE1),
1314                                                          _mm_mul_ps(prod_ai_SSE2,icf4_SSE2),
1315                                                          _mm_mul_ps(prod_ai_SSE3,icf4_SSE3))));
1316
1317             gpi_SSE0           = _mm_add_ps(gpi_SSE0, _mm_mul_ps(prod_SSE,icf4_SSE0));
1318             gpi_SSE1           = _mm_add_ps(gpi_SSE1, _mm_mul_ps(prod_SSE,icf4_SSE1));
1319             gpi_SSE2           = _mm_add_ps(gpi_SSE2, _mm_mul_ps(prod_SSE,icf4_SSE2));
1320             gpi_SSE3           = _mm_add_ps(gpi_SSE3, _mm_mul_ps(prod_SSE,icf4_SSE3));
1321
1322             /* Save ai->aj and aj->ai chain rule terms */
1323             _mm_store_ps(dadx,_mm_mul_ps(prod_SSE,icf6_SSE0));
1324             dadx+=4;
1325             _mm_store_ps(dadx,_mm_mul_ps(prod_SSE,icf6_SSE1));
1326             dadx+=4;
1327             _mm_store_ps(dadx,_mm_mul_ps(prod_SSE,icf6_SSE2));
1328             dadx+=4;
1329             _mm_store_ps(dadx,_mm_mul_ps(prod_SSE,icf6_SSE3));
1330             dadx+=4;
1331
1332             _mm_store_ps(dadx,_mm_mul_ps(prod_ai_SSE0,icf6_SSE0));
1333             dadx+=4;
1334             _mm_store_ps(dadx,_mm_mul_ps(prod_ai_SSE1,icf6_SSE1));
1335             dadx+=4;
1336             _mm_store_ps(dadx,_mm_mul_ps(prod_ai_SSE2,icf6_SSE2));
1337             dadx+=4;
1338             _mm_store_ps(dadx,_mm_mul_ps(prod_ai_SSE3,icf6_SSE3));
1339             dadx+=4;
1340         }
1341         _MM_TRANSPOSE4_PS(gpi_SSE0,gpi_SSE1,gpi_SSE2,gpi_SSE3);
1342         gpi_SSE0 = _mm_add_ps(gpi_SSE0,gpi_SSE1);
1343         gpi_SSE2 = _mm_add_ps(gpi_SSE2,gpi_SSE3);
1344         gpi_SSE0 = _mm_add_ps(gpi_SSE0,gpi_SSE2);
1345         _mm_store_ps(work+i, _mm_add_ps(gpi_SSE0, _mm_load_ps(work+i)));
1346         }
1347
1348     /* In case we have written anything beyond natoms, move it back.
1349      * Never mind that we leave stuff above natoms; that will not
1350      * be accessed later in the routine.
1351      * In principle this should be a move rather than sum, but this
1352      * way we dont have to worry about even/odd offsets...
1353      */
1354     for(i=natoms;i<ni1+1+natoms/2;i++)
1355     {
1356         work[i-natoms] += work[i];
1357     }
1358
1359     /* Parallel summations */
1360         if(PARTDECOMP(cr))
1361         {
1362                 gmx_sum(natoms,work,cr);
1363         }
1364
1365     factor  = 0.5 * ONE_4PI_EPS0;
1366         /* Calculate the radii - should we do all atoms, or just our local ones? */
1367         for(i=0;i<natoms;i++)
1368         {
1369                 if(born->use[i] != 0)
1370                 {
1371                         gpi  = born->gpol[i]+work[i];
1372                         gpi2 = gpi * gpi;
1373                         born->bRad[i]   = factor*gmx_invsqrt(gpi2);
1374                         fr->invsqrta[i] = gmx_invsqrt(born->bRad[i]);
1375                 }
1376         }
1377
1378         return 0;
1379 }
1380
1381
1382
1383 int
1384 genborn_allvsall_calc_hct_obc_radii_sse2_single(t_forcerec *           fr,
1385                                                 t_mdatoms *            mdatoms,
1386                                                 gmx_genborn_t *        born,
1387                                                 int                    gb_algorithm,
1388                                                 gmx_localtop_t *       top,
1389                                                 real *                 x,
1390                                                 t_commrec *            cr,
1391                                                 void *                 paadata)
1392 {
1393         gmx_allvsallgb2_data_t *aadata;
1394         int        natoms;
1395         int        ni0,ni1;
1396         int        nj0,nj1,nj2,nj3;
1397         int        i,j,k,n;
1398     int *      mask;
1399     int *      pmask0;
1400     int *      pmask1;
1401     int *      pmask2;
1402     int *      pmask3;
1403     int *      emask0;
1404     int *      emask1;
1405     int *      emask2;
1406     int *      emask3;
1407     real *     gb_radius;
1408     real *     vsolv;
1409     real *     work;
1410     real       tmpsum[4];
1411     real *     x_align;
1412     real *     y_align;
1413     real *     z_align;
1414     int *      jindex;
1415     real *     dadx;
1416     real *     obc_param;
1417     real       rad,min_rad;
1418     real rai,rai_inv,rai_inv2,sum_ai,sum_ai2,sum_ai3,tsum,tchain;
1419
1420     __m128     ix_SSE0,iy_SSE0,iz_SSE0;
1421     __m128     ix_SSE1,iy_SSE1,iz_SSE1;
1422     __m128     ix_SSE2,iy_SSE2,iz_SSE2;
1423     __m128     ix_SSE3,iy_SSE3,iz_SSE3;
1424     __m128     gpi_SSE0,rai_SSE0,prod_ai_SSE0;
1425     __m128     gpi_SSE1,rai_SSE1,prod_ai_SSE1;
1426     __m128     gpi_SSE2,rai_SSE2,prod_ai_SSE2;
1427     __m128     gpi_SSE3,rai_SSE3,prod_ai_SSE3;
1428     __m128     imask_SSE0,jmask_SSE0;
1429     __m128     imask_SSE1,jmask_SSE1;
1430     __m128     imask_SSE2,jmask_SSE2;
1431     __m128     imask_SSE3,jmask_SSE3;
1432     __m128     jx_SSE,jy_SSE,jz_SSE;
1433     __m128     dx_SSE0,dy_SSE0,dz_SSE0;
1434     __m128     dx_SSE1,dy_SSE1,dz_SSE1;
1435     __m128     dx_SSE2,dy_SSE2,dz_SSE2;
1436     __m128     dx_SSE3,dy_SSE3,dz_SSE3;
1437     __m128     rsq_SSE0,rinv_SSE0,irsq_SSE0,idr4_SSE0,idr6_SSE0;
1438     __m128     rsq_SSE1,rinv_SSE1,irsq_SSE1,idr4_SSE1,idr6_SSE1;
1439     __m128     rsq_SSE2,rinv_SSE2,irsq_SSE2,idr4_SSE2,idr6_SSE2;
1440     __m128     rsq_SSE3,rinv_SSE3,irsq_SSE3,idr4_SSE3,idr6_SSE3;
1441     __m128     raj_SSE,raj_inv_SSE,sk_aj_SSE,sk2_aj_SSE;
1442     __m128     ccf_SSE0,dccf_SSE0,prod_SSE0;
1443     __m128     ccf_SSE1,dccf_SSE1,prod_SSE1;
1444     __m128     ccf_SSE2,dccf_SSE2,prod_SSE2;
1445     __m128     ccf_SSE3,dccf_SSE3,prod_SSE3;
1446     __m128     icf4_SSE0,icf6_SSE0;
1447     __m128     icf4_SSE1,icf6_SSE1;
1448     __m128     icf4_SSE2,icf6_SSE2;
1449     __m128     icf4_SSE3,icf6_SSE3;
1450     __m128     oneeighth_SSE,onefourth_SSE,half_SSE,one_SSE,two_SSE,four_SSE;
1451     __m128     still_p4_SSE,still_p5inv_SSE,still_pip5_SSE;
1452     __m128     rai_inv_SSE0;
1453     __m128     rai_inv_SSE1;
1454     __m128     rai_inv_SSE2;
1455     __m128     rai_inv_SSE3;
1456     __m128     sk_ai_SSE0,sk2_ai_SSE0,sum_ai_SSE0;
1457     __m128     sk_ai_SSE1,sk2_ai_SSE1,sum_ai_SSE1;
1458     __m128     sk_ai_SSE2,sk2_ai_SSE2,sum_ai_SSE2;
1459     __m128     sk_ai_SSE3,sk2_ai_SSE3,sum_ai_SSE3;
1460     __m128     lij_inv_SSE0,sk2_rinv_SSE0;
1461     __m128     lij_inv_SSE1,sk2_rinv_SSE1;
1462     __m128     lij_inv_SSE2,sk2_rinv_SSE2;
1463     __m128     lij_inv_SSE3,sk2_rinv_SSE3;
1464     __m128     dr_SSE0;
1465     __m128     dr_SSE1;
1466     __m128     dr_SSE2;
1467     __m128     dr_SSE3;
1468     __m128     t1_SSE0,t2_SSE0,t3_SSE0,t4_SSE0;
1469     __m128     t1_SSE1,t2_SSE1,t3_SSE1,t4_SSE1;
1470     __m128     t1_SSE2,t2_SSE2,t3_SSE2,t4_SSE2;
1471     __m128     t1_SSE3,t2_SSE3,t3_SSE3,t4_SSE3;
1472     __m128     obc_mask1_SSE0,obc_mask2_SSE0,obc_mask3_SSE0;
1473     __m128     obc_mask1_SSE1,obc_mask2_SSE1,obc_mask3_SSE1;
1474     __m128     obc_mask1_SSE2,obc_mask2_SSE2,obc_mask3_SSE2;
1475     __m128     obc_mask1_SSE3,obc_mask2_SSE3,obc_mask3_SSE3;
1476     __m128     uij_SSE0,uij2_SSE0,uij3_SSE0;
1477     __m128     uij_SSE1,uij2_SSE1,uij3_SSE1;
1478     __m128     uij_SSE2,uij2_SSE2,uij3_SSE2;
1479     __m128     uij_SSE3,uij2_SSE3,uij3_SSE3;
1480     __m128     lij_SSE0,lij2_SSE0,lij3_SSE0;
1481     __m128     lij_SSE1,lij2_SSE1,lij3_SSE1;
1482     __m128     lij_SSE2,lij2_SSE2,lij3_SSE2;
1483     __m128     lij_SSE3,lij2_SSE3,lij3_SSE3;
1484     __m128     dlij_SSE0,diff2_SSE0,logterm_SSE0;
1485     __m128     dlij_SSE1,diff2_SSE1,logterm_SSE1;
1486     __m128     dlij_SSE2,diff2_SSE2,logterm_SSE2;
1487     __m128     dlij_SSE3,diff2_SSE3,logterm_SSE3;
1488     __m128     doffset_SSE;
1489
1490     natoms              = mdatoms->nr;
1491         ni0                 = (mdatoms->start/SIMD_WIDTH)*SIMD_WIDTH;
1492         ni1                 = mdatoms->start+mdatoms->homenr;
1493
1494     n = 0;
1495
1496     aadata = *((gmx_allvsallgb2_data_t **)paadata);
1497
1498
1499         if(aadata==NULL)
1500         {
1501                 genborn_allvsall_setup(&aadata,top,born,mdatoms,born->gb_doffset,
1502                                egbOBC,TRUE,TRUE,TRUE);
1503         *((gmx_allvsallgb2_data_t **)paadata) = aadata;
1504         }
1505
1506     x_align = aadata->x_align;
1507         y_align = aadata->y_align;
1508         z_align = aadata->z_align;
1509
1510     gb_radius = aadata->gb_radius;
1511     work      = aadata->work;
1512     jindex    = aadata->jindex_gb;
1513     dadx      = fr->dadx;
1514     obc_param = aadata->workparam;
1515
1516     oneeighth_SSE   = _mm_set1_ps(0.125);
1517     onefourth_SSE   = _mm_set1_ps(0.25);
1518     half_SSE        = _mm_set1_ps(0.5);
1519     one_SSE         = _mm_set1_ps(1.0);
1520     two_SSE         = _mm_set1_ps(2.0);
1521     four_SSE        = _mm_set1_ps(4.0);
1522     doffset_SSE     = _mm_set1_ps(born->gb_doffset);
1523
1524     for(i=0;i<natoms;i++)
1525         {
1526                 x_align[i]  = x[3*i];
1527                 y_align[i]  = x[3*i+1];
1528                 z_align[i]  = x[3*i+2];
1529         }
1530
1531     /* Copy again */
1532         for(i=0;i<natoms/2+1;i++)
1533         {
1534                 x_align[natoms+i]  = x_align[i];
1535                 y_align[natoms+i]  = y_align[i];
1536                 z_align[natoms+i]  = z_align[i];
1537     }
1538
1539     for(i=0;i<natoms+natoms/2+1;i++)
1540     {
1541         work[i] = 0;
1542     }
1543
1544         for(i=ni0; i<ni1; i+= UNROLLI)
1545         {
1546                 /* We assume shifts are NOT used for all-vs-all interactions */
1547
1548                 /* Load i atom data */
1549                 ix_SSE0          = _mm_load1_ps(x_align+i);
1550                 iy_SSE0          = _mm_load1_ps(y_align+i);
1551                 iz_SSE0          = _mm_load1_ps(z_align+i);
1552                 ix_SSE1          = _mm_load1_ps(x_align+i+1);
1553                 iy_SSE1          = _mm_load1_ps(y_align+i+1);
1554                 iz_SSE1          = _mm_load1_ps(z_align+i+1);
1555                 ix_SSE2          = _mm_load1_ps(x_align+i+2);
1556                 iy_SSE2          = _mm_load1_ps(y_align+i+2);
1557                 iz_SSE2          = _mm_load1_ps(z_align+i+2);
1558                 ix_SSE3          = _mm_load1_ps(x_align+i+3);
1559                 iy_SSE3          = _mm_load1_ps(y_align+i+3);
1560                 iz_SSE3          = _mm_load1_ps(z_align+i+3);
1561
1562         rai_SSE0         = _mm_load1_ps(gb_radius+i);
1563         rai_SSE1         = _mm_load1_ps(gb_radius+i+1);
1564         rai_SSE2         = _mm_load1_ps(gb_radius+i+2);
1565         rai_SSE3         = _mm_load1_ps(gb_radius+i+3);
1566         rai_inv_SSE0     = gmx_mm_inv_ps(rai_SSE0);
1567         rai_inv_SSE1     = gmx_mm_inv_ps(rai_SSE1);
1568         rai_inv_SSE2     = gmx_mm_inv_ps(rai_SSE2);
1569         rai_inv_SSE3     = gmx_mm_inv_ps(rai_SSE3);
1570
1571         sk_ai_SSE0       = _mm_load1_ps(obc_param+i);
1572         sk_ai_SSE1       = _mm_load1_ps(obc_param+i+1);
1573         sk_ai_SSE2       = _mm_load1_ps(obc_param+i+2);
1574         sk_ai_SSE3       = _mm_load1_ps(obc_param+i+3);
1575         sk2_ai_SSE0      = _mm_mul_ps(sk_ai_SSE0,sk_ai_SSE0);
1576         sk2_ai_SSE1      = _mm_mul_ps(sk_ai_SSE1,sk_ai_SSE1);
1577         sk2_ai_SSE2      = _mm_mul_ps(sk_ai_SSE2,sk_ai_SSE2);
1578         sk2_ai_SSE3      = _mm_mul_ps(sk_ai_SSE3,sk_ai_SSE3);
1579
1580         sum_ai_SSE0      = _mm_setzero_ps();
1581         sum_ai_SSE1      = _mm_setzero_ps();
1582         sum_ai_SSE2      = _mm_setzero_ps();
1583         sum_ai_SSE3      = _mm_setzero_ps();
1584
1585                 /* Load limits for loop over neighbors */
1586                 nj0              = jindex[4*i];
1587                 nj1              = jindex[4*i+1];
1588                 nj2              = jindex[4*i+2];
1589                 nj3              = jindex[4*i+3];
1590
1591         pmask0           = aadata->prologue_mask_gb[i];
1592         pmask1           = aadata->prologue_mask_gb[i+1];
1593         pmask2           = aadata->prologue_mask_gb[i+2];
1594         pmask3           = aadata->prologue_mask_gb[i+3];
1595         emask0           = aadata->epilogue_mask[i];
1596         emask1           = aadata->epilogue_mask[i+1];
1597         emask2           = aadata->epilogue_mask[i+2];
1598         emask3           = aadata->epilogue_mask[i+3];
1599
1600         imask_SSE0        = _mm_load1_ps((real *)(aadata->imask+i));
1601         imask_SSE1        = _mm_load1_ps((real *)(aadata->imask+i+1));
1602         imask_SSE2        = _mm_load1_ps((real *)(aadata->imask+i+2));
1603         imask_SSE3        = _mm_load1_ps((real *)(aadata->imask+i+3));
1604
1605         /* Prologue part, including exclusion mask */
1606         for(j=nj0; j<nj1; j+=UNROLLJ)
1607         {
1608             jmask_SSE0 = _mm_load_ps((real *)pmask0);
1609             jmask_SSE1 = _mm_load_ps((real *)pmask1);
1610             jmask_SSE2 = _mm_load_ps((real *)pmask2);
1611             jmask_SSE3 = _mm_load_ps((real *)pmask3);
1612             pmask0 += UNROLLJ;
1613             pmask1 += UNROLLJ;
1614             pmask2 += UNROLLJ;
1615             pmask3 += UNROLLJ;
1616
1617             /* load j atom coordinates */
1618             jx_SSE            = _mm_load_ps(x_align+j);
1619             jy_SSE            = _mm_load_ps(y_align+j);
1620             jz_SSE            = _mm_load_ps(z_align+j);
1621
1622             /* Calculate distance */
1623             dx_SSE0            = _mm_sub_ps(ix_SSE0,jx_SSE);
1624             dy_SSE0            = _mm_sub_ps(iy_SSE0,jy_SSE);
1625             dz_SSE0            = _mm_sub_ps(iz_SSE0,jz_SSE);
1626             dx_SSE1            = _mm_sub_ps(ix_SSE1,jx_SSE);
1627             dy_SSE1            = _mm_sub_ps(iy_SSE1,jy_SSE);
1628             dz_SSE1            = _mm_sub_ps(iz_SSE1,jz_SSE);
1629             dx_SSE2            = _mm_sub_ps(ix_SSE2,jx_SSE);
1630             dy_SSE2            = _mm_sub_ps(iy_SSE2,jy_SSE);
1631             dz_SSE2            = _mm_sub_ps(iz_SSE2,jz_SSE);
1632             dx_SSE3            = _mm_sub_ps(ix_SSE3,jx_SSE);
1633             dy_SSE3            = _mm_sub_ps(iy_SSE3,jy_SSE);
1634             dz_SSE3            = _mm_sub_ps(iz_SSE3,jz_SSE);
1635
1636             /* rsq = dx*dx+dy*dy+dz*dz */
1637             rsq_SSE0           = gmx_mm_calc_rsq_ps(dx_SSE0,dy_SSE0,dz_SSE0);
1638             rsq_SSE1           = gmx_mm_calc_rsq_ps(dx_SSE1,dy_SSE1,dz_SSE1);
1639             rsq_SSE2           = gmx_mm_calc_rsq_ps(dx_SSE2,dy_SSE2,dz_SSE2);
1640             rsq_SSE3           = gmx_mm_calc_rsq_ps(dx_SSE3,dy_SSE3,dz_SSE3);
1641
1642             /* Combine masks */
1643             jmask_SSE0         = _mm_and_ps(jmask_SSE0,imask_SSE0);
1644             jmask_SSE1         = _mm_and_ps(jmask_SSE1,imask_SSE1);
1645             jmask_SSE2         = _mm_and_ps(jmask_SSE2,imask_SSE2);
1646             jmask_SSE3         = _mm_and_ps(jmask_SSE3,imask_SSE3);
1647
1648             /* Calculate 1/r and 1/r2 */
1649             rinv_SSE0          = gmx_mm_invsqrt_ps(rsq_SSE0);
1650             rinv_SSE1          = gmx_mm_invsqrt_ps(rsq_SSE1);
1651             rinv_SSE2          = gmx_mm_invsqrt_ps(rsq_SSE2);
1652             rinv_SSE3          = gmx_mm_invsqrt_ps(rsq_SSE3);
1653
1654             /* Apply mask */
1655             rinv_SSE0          = _mm_and_ps(rinv_SSE0,jmask_SSE0);
1656             rinv_SSE1          = _mm_and_ps(rinv_SSE1,jmask_SSE1);
1657             rinv_SSE2          = _mm_and_ps(rinv_SSE2,jmask_SSE2);
1658             rinv_SSE3          = _mm_and_ps(rinv_SSE3,jmask_SSE3);
1659
1660             dr_SSE0            = _mm_mul_ps(rsq_SSE0,rinv_SSE0);
1661             dr_SSE1            = _mm_mul_ps(rsq_SSE1,rinv_SSE1);
1662             dr_SSE2            = _mm_mul_ps(rsq_SSE2,rinv_SSE2);
1663             dr_SSE3            = _mm_mul_ps(rsq_SSE3,rinv_SSE3);
1664
1665             sk_aj_SSE          = _mm_load_ps(obc_param+j);
1666             raj_SSE            = _mm_load_ps(gb_radius+j);
1667             raj_inv_SSE        = gmx_mm_inv_ps(raj_SSE);
1668
1669             /* Evaluate influence of atom aj -> ai */
1670             t1_SSE0            = _mm_add_ps(dr_SSE0,sk_aj_SSE);
1671             t1_SSE1            = _mm_add_ps(dr_SSE1,sk_aj_SSE);
1672             t1_SSE2            = _mm_add_ps(dr_SSE2,sk_aj_SSE);
1673             t1_SSE3            = _mm_add_ps(dr_SSE3,sk_aj_SSE);
1674             t2_SSE0            = _mm_sub_ps(dr_SSE0,sk_aj_SSE);
1675             t2_SSE1            = _mm_sub_ps(dr_SSE1,sk_aj_SSE);
1676             t2_SSE2            = _mm_sub_ps(dr_SSE2,sk_aj_SSE);
1677             t2_SSE3            = _mm_sub_ps(dr_SSE3,sk_aj_SSE);
1678             t3_SSE0            = _mm_sub_ps(sk_aj_SSE,dr_SSE0);
1679             t3_SSE1            = _mm_sub_ps(sk_aj_SSE,dr_SSE1);
1680             t3_SSE2            = _mm_sub_ps(sk_aj_SSE,dr_SSE2);
1681             t3_SSE3            = _mm_sub_ps(sk_aj_SSE,dr_SSE3);
1682
1683             obc_mask1_SSE0     = _mm_cmplt_ps(rai_SSE0, t1_SSE0);
1684             obc_mask1_SSE1     = _mm_cmplt_ps(rai_SSE1, t1_SSE1);
1685             obc_mask1_SSE2     = _mm_cmplt_ps(rai_SSE2, t1_SSE2);
1686             obc_mask1_SSE3     = _mm_cmplt_ps(rai_SSE3, t1_SSE3);
1687             obc_mask2_SSE0     = _mm_cmplt_ps(rai_SSE0, t2_SSE0);
1688             obc_mask2_SSE1     = _mm_cmplt_ps(rai_SSE1, t2_SSE1);
1689             obc_mask2_SSE2     = _mm_cmplt_ps(rai_SSE2, t2_SSE2);
1690             obc_mask2_SSE3     = _mm_cmplt_ps(rai_SSE3, t2_SSE3);
1691             obc_mask3_SSE0     = _mm_cmplt_ps(rai_SSE0, t3_SSE0);
1692             obc_mask3_SSE1     = _mm_cmplt_ps(rai_SSE1, t3_SSE1);
1693             obc_mask3_SSE2     = _mm_cmplt_ps(rai_SSE2, t3_SSE2);
1694             obc_mask3_SSE3     = _mm_cmplt_ps(rai_SSE3, t3_SSE3);
1695             obc_mask1_SSE0     = _mm_and_ps(obc_mask1_SSE0,jmask_SSE0);
1696             obc_mask1_SSE1     = _mm_and_ps(obc_mask1_SSE1,jmask_SSE1);
1697             obc_mask1_SSE2     = _mm_and_ps(obc_mask1_SSE2,jmask_SSE2);
1698             obc_mask1_SSE3     = _mm_and_ps(obc_mask1_SSE3,jmask_SSE3);
1699
1700             uij_SSE0           = gmx_mm_inv_ps(t1_SSE0);
1701             uij_SSE1           = gmx_mm_inv_ps(t1_SSE1);
1702             uij_SSE2           = gmx_mm_inv_ps(t1_SSE2);
1703             uij_SSE3           = gmx_mm_inv_ps(t1_SSE3);
1704             lij_SSE0           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE0,gmx_mm_inv_ps(t2_SSE0)),
1705                                            _mm_andnot_ps(obc_mask2_SSE0,rai_inv_SSE0));
1706             lij_SSE1           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE1,gmx_mm_inv_ps(t2_SSE1)),
1707                                            _mm_andnot_ps(obc_mask2_SSE1,rai_inv_SSE1));
1708             lij_SSE2           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE2,gmx_mm_inv_ps(t2_SSE2)),
1709                                            _mm_andnot_ps(obc_mask2_SSE2,rai_inv_SSE2));
1710             lij_SSE3           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE3,gmx_mm_inv_ps(t2_SSE3)),
1711                                            _mm_andnot_ps(obc_mask2_SSE3,rai_inv_SSE3));
1712             dlij_SSE0          = _mm_and_ps(one_SSE,obc_mask2_SSE0);
1713             dlij_SSE1          = _mm_and_ps(one_SSE,obc_mask2_SSE1);
1714             dlij_SSE2          = _mm_and_ps(one_SSE,obc_mask2_SSE2);
1715             dlij_SSE3          = _mm_and_ps(one_SSE,obc_mask2_SSE3);
1716
1717             uij2_SSE0          = _mm_mul_ps(uij_SSE0, uij_SSE0);
1718             uij2_SSE1          = _mm_mul_ps(uij_SSE1, uij_SSE1);
1719             uij2_SSE2          = _mm_mul_ps(uij_SSE2, uij_SSE2);
1720             uij2_SSE3          = _mm_mul_ps(uij_SSE3, uij_SSE3);
1721             uij3_SSE0          = _mm_mul_ps(uij2_SSE0,uij_SSE0);
1722             uij3_SSE1          = _mm_mul_ps(uij2_SSE1,uij_SSE1);
1723             uij3_SSE2          = _mm_mul_ps(uij2_SSE2,uij_SSE2);
1724             uij3_SSE3          = _mm_mul_ps(uij2_SSE3,uij_SSE3);
1725             lij2_SSE0          = _mm_mul_ps(lij_SSE0, lij_SSE0);
1726             lij2_SSE1          = _mm_mul_ps(lij_SSE1, lij_SSE1);
1727             lij2_SSE2          = _mm_mul_ps(lij_SSE2, lij_SSE2);
1728             lij2_SSE3          = _mm_mul_ps(lij_SSE3, lij_SSE3);
1729             lij3_SSE0          = _mm_mul_ps(lij2_SSE0,lij_SSE0);
1730             lij3_SSE1          = _mm_mul_ps(lij2_SSE1,lij_SSE1);
1731             lij3_SSE2          = _mm_mul_ps(lij2_SSE2,lij_SSE2);
1732             lij3_SSE3          = _mm_mul_ps(lij2_SSE3,lij_SSE3);
1733
1734             diff2_SSE0         = _mm_sub_ps(uij2_SSE0,lij2_SSE0);
1735             diff2_SSE1         = _mm_sub_ps(uij2_SSE1,lij2_SSE1);
1736             diff2_SSE2         = _mm_sub_ps(uij2_SSE2,lij2_SSE2);
1737             diff2_SSE3         = _mm_sub_ps(uij2_SSE3,lij2_SSE3);
1738             lij_inv_SSE0       = gmx_mm_invsqrt_ps(lij2_SSE0);
1739             lij_inv_SSE1       = gmx_mm_invsqrt_ps(lij2_SSE1);
1740             lij_inv_SSE2       = gmx_mm_invsqrt_ps(lij2_SSE2);
1741             lij_inv_SSE3       = gmx_mm_invsqrt_ps(lij2_SSE3);
1742             sk2_aj_SSE         = _mm_mul_ps(sk_aj_SSE,sk_aj_SSE);
1743             sk2_rinv_SSE0      = _mm_mul_ps(sk2_aj_SSE,rinv_SSE0);
1744             sk2_rinv_SSE1      = _mm_mul_ps(sk2_aj_SSE,rinv_SSE1);
1745             sk2_rinv_SSE2      = _mm_mul_ps(sk2_aj_SSE,rinv_SSE2);
1746             sk2_rinv_SSE3      = _mm_mul_ps(sk2_aj_SSE,rinv_SSE3);
1747             prod_SSE0          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE0);
1748             prod_SSE1          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE1);
1749             prod_SSE2          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE2);
1750             prod_SSE3          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE3);
1751
1752             logterm_SSE0       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE0,lij_inv_SSE0));
1753             logterm_SSE1       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE1,lij_inv_SSE1));
1754             logterm_SSE2       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE2,lij_inv_SSE2));
1755             logterm_SSE3       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE3,lij_inv_SSE3));
1756
1757             t1_SSE0            = _mm_sub_ps(lij_SSE0,uij_SSE0);
1758             t1_SSE1            = _mm_sub_ps(lij_SSE1,uij_SSE1);
1759             t1_SSE2            = _mm_sub_ps(lij_SSE2,uij_SSE2);
1760             t1_SSE3            = _mm_sub_ps(lij_SSE3,uij_SSE3);
1761             t2_SSE0            = _mm_mul_ps(diff2_SSE0,
1762                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE0),
1763                                                        prod_SSE0));
1764             t2_SSE1            = _mm_mul_ps(diff2_SSE1,
1765                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE1),
1766                                                        prod_SSE1));
1767             t2_SSE2            = _mm_mul_ps(diff2_SSE2,
1768                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE2),
1769                                                        prod_SSE2));
1770             t2_SSE3            = _mm_mul_ps(diff2_SSE3,
1771                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE3),
1772                                                        prod_SSE3));
1773
1774             t3_SSE0            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE0,logterm_SSE0));
1775             t3_SSE1            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE1,logterm_SSE1));
1776             t3_SSE2            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE2,logterm_SSE2));
1777             t3_SSE3            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE3,logterm_SSE3));
1778             t1_SSE0            = _mm_add_ps(t1_SSE0,_mm_add_ps(t2_SSE0,t3_SSE0));
1779             t1_SSE1            = _mm_add_ps(t1_SSE1,_mm_add_ps(t2_SSE1,t3_SSE1));
1780             t1_SSE2            = _mm_add_ps(t1_SSE2,_mm_add_ps(t2_SSE2,t3_SSE2));
1781             t1_SSE3            = _mm_add_ps(t1_SSE3,_mm_add_ps(t2_SSE3,t3_SSE3));
1782             t4_SSE0            = _mm_mul_ps(two_SSE,_mm_sub_ps(rai_inv_SSE0,lij_SSE0));
1783             t4_SSE1            = _mm_mul_ps(two_SSE,_mm_sub_ps(rai_inv_SSE1,lij_SSE1));
1784             t4_SSE2            = _mm_mul_ps(two_SSE,_mm_sub_ps(rai_inv_SSE2,lij_SSE2));
1785             t4_SSE3            = _mm_mul_ps(two_SSE,_mm_sub_ps(rai_inv_SSE3,lij_SSE3));
1786             t4_SSE0            = _mm_and_ps(t4_SSE0,obc_mask3_SSE0);
1787             t4_SSE1            = _mm_and_ps(t4_SSE1,obc_mask3_SSE1);
1788             t4_SSE2            = _mm_and_ps(t4_SSE2,obc_mask3_SSE2);
1789             t4_SSE3            = _mm_and_ps(t4_SSE3,obc_mask3_SSE3);
1790             t1_SSE0            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE0,t4_SSE0));
1791             t1_SSE1            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE1,t4_SSE1));
1792             t1_SSE2            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE2,t4_SSE2));
1793             t1_SSE3            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE3,t4_SSE3));
1794
1795             sum_ai_SSE0        = _mm_add_ps(sum_ai_SSE0,_mm_and_ps(t1_SSE0,obc_mask1_SSE0));
1796             sum_ai_SSE1        = _mm_add_ps(sum_ai_SSE1,_mm_and_ps(t1_SSE1,obc_mask1_SSE1));
1797             sum_ai_SSE2        = _mm_add_ps(sum_ai_SSE2,_mm_and_ps(t1_SSE2,obc_mask1_SSE2));
1798             sum_ai_SSE3        = _mm_add_ps(sum_ai_SSE3,_mm_and_ps(t1_SSE3,obc_mask1_SSE3));
1799
1800             t1_SSE0            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE0),
1801                                             _mm_mul_ps(prod_SSE0,lij3_SSE0));
1802             t1_SSE1            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE1),
1803                                             _mm_mul_ps(prod_SSE1,lij3_SSE1));
1804             t1_SSE2            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE2),
1805                                             _mm_mul_ps(prod_SSE2,lij3_SSE2));
1806             t1_SSE3            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE3),
1807                                             _mm_mul_ps(prod_SSE3,lij3_SSE3));
1808             t1_SSE0            = _mm_sub_ps(t1_SSE0,
1809                                             _mm_mul_ps(onefourth_SSE,
1810                                                        _mm_add_ps(_mm_mul_ps(lij_SSE0,rinv_SSE0),
1811                                                                   _mm_mul_ps(lij3_SSE0,dr_SSE0))));
1812             t1_SSE1            = _mm_sub_ps(t1_SSE1,
1813                                             _mm_mul_ps(onefourth_SSE,
1814                                                        _mm_add_ps(_mm_mul_ps(lij_SSE1,rinv_SSE1),
1815                                                                   _mm_mul_ps(lij3_SSE1,dr_SSE1))));
1816             t1_SSE2            = _mm_sub_ps(t1_SSE2,
1817                                             _mm_mul_ps(onefourth_SSE,
1818                                                        _mm_add_ps(_mm_mul_ps(lij_SSE2,rinv_SSE2),
1819                                                                   _mm_mul_ps(lij3_SSE2,dr_SSE2))));
1820             t1_SSE3            = _mm_sub_ps(t1_SSE3,
1821                                             _mm_mul_ps(onefourth_SSE,
1822                                                        _mm_add_ps(_mm_mul_ps(lij_SSE3,rinv_SSE3),
1823                                                                   _mm_mul_ps(lij3_SSE3,dr_SSE3))));
1824
1825             t2_SSE0            = _mm_mul_ps(onefourth_SSE,
1826                                             _mm_add_ps(_mm_mul_ps(uij_SSE0,rinv_SSE0),
1827                                                        _mm_mul_ps(uij3_SSE0,dr_SSE0)));
1828             t2_SSE1            = _mm_mul_ps(onefourth_SSE,
1829                                             _mm_add_ps(_mm_mul_ps(uij_SSE1,rinv_SSE1),
1830                                                        _mm_mul_ps(uij3_SSE1,dr_SSE1)));
1831             t2_SSE2            = _mm_mul_ps(onefourth_SSE,
1832                                             _mm_add_ps(_mm_mul_ps(uij_SSE2,rinv_SSE2),
1833                                                        _mm_mul_ps(uij3_SSE2,dr_SSE2)));
1834             t2_SSE3            = _mm_mul_ps(onefourth_SSE,
1835                                             _mm_add_ps(_mm_mul_ps(uij_SSE3,rinv_SSE3),
1836                                                        _mm_mul_ps(uij3_SSE3,dr_SSE3)));
1837             t2_SSE0            = _mm_sub_ps(t2_SSE0,
1838                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE0),
1839                                                        _mm_mul_ps(prod_SSE0,uij3_SSE0)));
1840             t2_SSE1            = _mm_sub_ps(t2_SSE1,
1841                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE1),
1842                                                        _mm_mul_ps(prod_SSE1,uij3_SSE1)));
1843             t2_SSE2            = _mm_sub_ps(t2_SSE2,
1844                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE2),
1845                                                        _mm_mul_ps(prod_SSE2,uij3_SSE2)));
1846             t2_SSE3            = _mm_sub_ps(t2_SSE3,
1847                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE3),
1848                                                        _mm_mul_ps(prod_SSE3,uij3_SSE3)));
1849             t3_SSE0            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE0),
1850                                             _mm_mul_ps(rinv_SSE0,rinv_SSE0));
1851             t3_SSE1            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE1),
1852                                             _mm_mul_ps(rinv_SSE1,rinv_SSE1));
1853             t3_SSE2            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE2),
1854                                             _mm_mul_ps(rinv_SSE2,rinv_SSE2));
1855             t3_SSE3            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE3),
1856                                             _mm_mul_ps(rinv_SSE3,rinv_SSE3));
1857             t3_SSE0            = _mm_sub_ps(t3_SSE0,
1858                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE0,oneeighth_SSE),
1859                                                        _mm_add_ps(one_SSE,
1860                                                                   _mm_mul_ps(sk2_rinv_SSE0,rinv_SSE0))));
1861             t3_SSE1            = _mm_sub_ps(t3_SSE1,
1862                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE1,oneeighth_SSE),
1863                                                        _mm_add_ps(one_SSE,
1864                                                                   _mm_mul_ps(sk2_rinv_SSE1,rinv_SSE1))));
1865             t3_SSE2            = _mm_sub_ps(t3_SSE2,
1866                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE2,oneeighth_SSE),
1867                                                        _mm_add_ps(one_SSE,
1868                                                                   _mm_mul_ps(sk2_rinv_SSE2,rinv_SSE2))));
1869             t3_SSE3            = _mm_sub_ps(t3_SSE3,
1870                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE3,oneeighth_SSE),
1871                                                        _mm_add_ps(one_SSE,
1872                                                                   _mm_mul_ps(sk2_rinv_SSE3,rinv_SSE3))));
1873
1874             t1_SSE0            = _mm_mul_ps(rinv_SSE0,
1875                                             _mm_add_ps(_mm_mul_ps(dlij_SSE0,t1_SSE0),
1876                                                        _mm_add_ps(t2_SSE0,t3_SSE0)));
1877             t1_SSE1            = _mm_mul_ps(rinv_SSE1,
1878                                             _mm_add_ps(_mm_mul_ps(dlij_SSE1,t1_SSE1),
1879                                                        _mm_add_ps(t2_SSE1,t3_SSE1)));
1880             t1_SSE2            = _mm_mul_ps(rinv_SSE2,
1881                                             _mm_add_ps(_mm_mul_ps(dlij_SSE2,t1_SSE2),
1882                                                        _mm_add_ps(t2_SSE2,t3_SSE2)));
1883             t1_SSE3            = _mm_mul_ps(rinv_SSE3,
1884                                             _mm_add_ps(_mm_mul_ps(dlij_SSE3,t1_SSE3),
1885                                                        _mm_add_ps(t2_SSE3,t3_SSE3)));
1886
1887             _mm_store_ps(dadx,_mm_and_ps(t1_SSE0,obc_mask1_SSE0));
1888             dadx += 4;
1889             _mm_store_ps(dadx,_mm_and_ps(t1_SSE1,obc_mask1_SSE1));
1890             dadx += 4;
1891             _mm_store_ps(dadx,_mm_and_ps(t1_SSE2,obc_mask1_SSE2));
1892             dadx += 4;
1893             _mm_store_ps(dadx,_mm_and_ps(t1_SSE3,obc_mask1_SSE3));
1894             dadx += 4;
1895
1896             /* Evaluate influence of atom ai -> aj */
1897             t1_SSE0            = _mm_add_ps(dr_SSE0,sk_ai_SSE0);
1898             t1_SSE1            = _mm_add_ps(dr_SSE1,sk_ai_SSE1);
1899             t1_SSE2            = _mm_add_ps(dr_SSE2,sk_ai_SSE2);
1900             t1_SSE3            = _mm_add_ps(dr_SSE3,sk_ai_SSE3);
1901             t2_SSE0            = _mm_sub_ps(dr_SSE0,sk_ai_SSE0);
1902             t2_SSE1            = _mm_sub_ps(dr_SSE1,sk_ai_SSE1);
1903             t2_SSE2            = _mm_sub_ps(dr_SSE2,sk_ai_SSE2);
1904             t2_SSE3            = _mm_sub_ps(dr_SSE3,sk_ai_SSE3);
1905             t3_SSE0            = _mm_sub_ps(sk_ai_SSE0,dr_SSE0);
1906             t3_SSE1            = _mm_sub_ps(sk_ai_SSE1,dr_SSE1);
1907             t3_SSE2            = _mm_sub_ps(sk_ai_SSE2,dr_SSE2);
1908             t3_SSE3            = _mm_sub_ps(sk_ai_SSE3,dr_SSE3);
1909
1910             obc_mask1_SSE0     = _mm_cmplt_ps(raj_SSE, t1_SSE0);
1911             obc_mask1_SSE1     = _mm_cmplt_ps(raj_SSE, t1_SSE1);
1912             obc_mask1_SSE2     = _mm_cmplt_ps(raj_SSE, t1_SSE2);
1913             obc_mask1_SSE3     = _mm_cmplt_ps(raj_SSE, t1_SSE3);
1914             obc_mask2_SSE0     = _mm_cmplt_ps(raj_SSE, t2_SSE0);
1915             obc_mask2_SSE1     = _mm_cmplt_ps(raj_SSE, t2_SSE1);
1916             obc_mask2_SSE2     = _mm_cmplt_ps(raj_SSE, t2_SSE2);
1917             obc_mask2_SSE3     = _mm_cmplt_ps(raj_SSE, t2_SSE3);
1918             obc_mask3_SSE0     = _mm_cmplt_ps(raj_SSE, t3_SSE0);
1919             obc_mask3_SSE1     = _mm_cmplt_ps(raj_SSE, t3_SSE1);
1920             obc_mask3_SSE2     = _mm_cmplt_ps(raj_SSE, t3_SSE2);
1921             obc_mask3_SSE3     = _mm_cmplt_ps(raj_SSE, t3_SSE3);
1922             obc_mask1_SSE0     = _mm_and_ps(obc_mask1_SSE0,jmask_SSE0);
1923             obc_mask1_SSE1     = _mm_and_ps(obc_mask1_SSE1,jmask_SSE1);
1924             obc_mask1_SSE2     = _mm_and_ps(obc_mask1_SSE2,jmask_SSE2);
1925             obc_mask1_SSE3     = _mm_and_ps(obc_mask1_SSE3,jmask_SSE3);
1926
1927             uij_SSE0           = gmx_mm_inv_ps(t1_SSE0);
1928             uij_SSE1           = gmx_mm_inv_ps(t1_SSE1);
1929             uij_SSE2           = gmx_mm_inv_ps(t1_SSE2);
1930             uij_SSE3           = gmx_mm_inv_ps(t1_SSE3);
1931             lij_SSE0           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE0,gmx_mm_inv_ps(t2_SSE0)),
1932                                            _mm_andnot_ps(obc_mask2_SSE0,raj_inv_SSE));
1933             lij_SSE1           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE1,gmx_mm_inv_ps(t2_SSE1)),
1934                                            _mm_andnot_ps(obc_mask2_SSE1,raj_inv_SSE));
1935             lij_SSE2           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE2,gmx_mm_inv_ps(t2_SSE2)),
1936                                            _mm_andnot_ps(obc_mask2_SSE2,raj_inv_SSE));
1937             lij_SSE3           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE3,gmx_mm_inv_ps(t2_SSE3)),
1938                                            _mm_andnot_ps(obc_mask2_SSE3,raj_inv_SSE));
1939             dlij_SSE0          = _mm_and_ps(one_SSE,obc_mask2_SSE0);
1940             dlij_SSE1          = _mm_and_ps(one_SSE,obc_mask2_SSE1);
1941             dlij_SSE2          = _mm_and_ps(one_SSE,obc_mask2_SSE2);
1942             dlij_SSE3          = _mm_and_ps(one_SSE,obc_mask2_SSE3);
1943
1944             uij2_SSE0          = _mm_mul_ps(uij_SSE0, uij_SSE0);
1945             uij2_SSE1          = _mm_mul_ps(uij_SSE1, uij_SSE1);
1946             uij2_SSE2          = _mm_mul_ps(uij_SSE2, uij_SSE2);
1947             uij2_SSE3          = _mm_mul_ps(uij_SSE3, uij_SSE3);
1948             uij3_SSE0          = _mm_mul_ps(uij2_SSE0,uij_SSE0);
1949             uij3_SSE1          = _mm_mul_ps(uij2_SSE1,uij_SSE1);
1950             uij3_SSE2          = _mm_mul_ps(uij2_SSE2,uij_SSE2);
1951             uij3_SSE3          = _mm_mul_ps(uij2_SSE3,uij_SSE3);
1952             lij2_SSE0          = _mm_mul_ps(lij_SSE0, lij_SSE0);
1953             lij2_SSE1          = _mm_mul_ps(lij_SSE1, lij_SSE1);
1954             lij2_SSE2          = _mm_mul_ps(lij_SSE2, lij_SSE2);
1955             lij2_SSE3          = _mm_mul_ps(lij_SSE3, lij_SSE3);
1956             lij3_SSE0          = _mm_mul_ps(lij2_SSE0,lij_SSE0);
1957             lij3_SSE1          = _mm_mul_ps(lij2_SSE1,lij_SSE1);
1958             lij3_SSE2          = _mm_mul_ps(lij2_SSE2,lij_SSE2);
1959             lij3_SSE3          = _mm_mul_ps(lij2_SSE3,lij_SSE3);
1960
1961             diff2_SSE0         = _mm_sub_ps(uij2_SSE0,lij2_SSE0);
1962             diff2_SSE1         = _mm_sub_ps(uij2_SSE1,lij2_SSE1);
1963             diff2_SSE2         = _mm_sub_ps(uij2_SSE2,lij2_SSE2);
1964             diff2_SSE3         = _mm_sub_ps(uij2_SSE3,lij2_SSE3);
1965             lij_inv_SSE0       = gmx_mm_invsqrt_ps(lij2_SSE0);
1966             lij_inv_SSE1       = gmx_mm_invsqrt_ps(lij2_SSE1);
1967             lij_inv_SSE2       = gmx_mm_invsqrt_ps(lij2_SSE2);
1968             lij_inv_SSE3       = gmx_mm_invsqrt_ps(lij2_SSE3);
1969             sk2_rinv_SSE0      = _mm_mul_ps(sk2_ai_SSE0,rinv_SSE0);
1970             sk2_rinv_SSE1      = _mm_mul_ps(sk2_ai_SSE1,rinv_SSE1);
1971             sk2_rinv_SSE2      = _mm_mul_ps(sk2_ai_SSE2,rinv_SSE2);
1972             sk2_rinv_SSE3      = _mm_mul_ps(sk2_ai_SSE3,rinv_SSE3);
1973             prod_SSE0          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE0);
1974             prod_SSE1          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE1);
1975             prod_SSE2          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE2);
1976             prod_SSE3          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE3);
1977
1978             logterm_SSE0       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE0,lij_inv_SSE0));
1979             logterm_SSE1       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE1,lij_inv_SSE1));
1980             logterm_SSE2       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE2,lij_inv_SSE2));
1981             logterm_SSE3       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE3,lij_inv_SSE3));
1982             t1_SSE0            = _mm_sub_ps(lij_SSE0,uij_SSE0);
1983             t1_SSE1            = _mm_sub_ps(lij_SSE1,uij_SSE1);
1984             t1_SSE2            = _mm_sub_ps(lij_SSE2,uij_SSE2);
1985             t1_SSE3            = _mm_sub_ps(lij_SSE3,uij_SSE3);
1986             t2_SSE0            = _mm_mul_ps(diff2_SSE0,
1987                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE0),
1988                                                        prod_SSE0));
1989             t2_SSE1            = _mm_mul_ps(diff2_SSE1,
1990                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE1),
1991                                                        prod_SSE1));
1992             t2_SSE2            = _mm_mul_ps(diff2_SSE2,
1993                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE2),
1994                                                        prod_SSE2));
1995             t2_SSE3            = _mm_mul_ps(diff2_SSE3,
1996                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE3),
1997                                                        prod_SSE3));
1998             t3_SSE0            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE0,logterm_SSE0));
1999             t3_SSE1            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE1,logterm_SSE1));
2000             t3_SSE2            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE2,logterm_SSE2));
2001             t3_SSE3            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE3,logterm_SSE3));
2002             t1_SSE0            = _mm_add_ps(t1_SSE0,_mm_add_ps(t2_SSE0,t3_SSE0));
2003             t1_SSE1            = _mm_add_ps(t1_SSE1,_mm_add_ps(t2_SSE1,t3_SSE1));
2004             t1_SSE2            = _mm_add_ps(t1_SSE2,_mm_add_ps(t2_SSE2,t3_SSE2));
2005             t1_SSE3            = _mm_add_ps(t1_SSE3,_mm_add_ps(t2_SSE3,t3_SSE3));
2006             t4_SSE0            = _mm_mul_ps(two_SSE,_mm_sub_ps(raj_inv_SSE,lij_SSE0));
2007             t4_SSE1            = _mm_mul_ps(two_SSE,_mm_sub_ps(raj_inv_SSE,lij_SSE1));
2008             t4_SSE2            = _mm_mul_ps(two_SSE,_mm_sub_ps(raj_inv_SSE,lij_SSE2));
2009             t4_SSE3            = _mm_mul_ps(two_SSE,_mm_sub_ps(raj_inv_SSE,lij_SSE3));
2010             t4_SSE0            = _mm_and_ps(t4_SSE0,obc_mask3_SSE0);
2011             t4_SSE1            = _mm_and_ps(t4_SSE1,obc_mask3_SSE1);
2012             t4_SSE2            = _mm_and_ps(t4_SSE2,obc_mask3_SSE2);
2013             t4_SSE3            = _mm_and_ps(t4_SSE3,obc_mask3_SSE3);
2014             t1_SSE0            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE0,t4_SSE0));
2015             t1_SSE1            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE1,t4_SSE1));
2016             t1_SSE2            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE2,t4_SSE2));
2017             t1_SSE3            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE3,t4_SSE3));
2018
2019             _mm_store_ps(work+j, _mm_add_ps(_mm_load_ps(work+j),
2020                                             gmx_mm_sum4_ps(_mm_and_ps(t1_SSE0,obc_mask1_SSE0),
2021                                                         _mm_and_ps(t1_SSE1,obc_mask1_SSE1),
2022                                                         _mm_and_ps(t1_SSE2,obc_mask1_SSE2),
2023                                                         _mm_and_ps(t1_SSE3,obc_mask1_SSE3))));
2024
2025             t1_SSE0            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE0),
2026                                             _mm_mul_ps(prod_SSE0,lij3_SSE0));
2027             t1_SSE1            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE1),
2028                                             _mm_mul_ps(prod_SSE1,lij3_SSE1));
2029             t1_SSE2            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE2),
2030                                             _mm_mul_ps(prod_SSE2,lij3_SSE2));
2031             t1_SSE3            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE3),
2032                                             _mm_mul_ps(prod_SSE3,lij3_SSE3));
2033             t1_SSE0            = _mm_sub_ps(t1_SSE0,
2034                                             _mm_mul_ps(onefourth_SSE,
2035                                                        _mm_add_ps(_mm_mul_ps(lij_SSE0,rinv_SSE0),
2036                                                                   _mm_mul_ps(lij3_SSE0,dr_SSE0))));
2037             t1_SSE1            = _mm_sub_ps(t1_SSE1,
2038                                             _mm_mul_ps(onefourth_SSE,
2039                                                        _mm_add_ps(_mm_mul_ps(lij_SSE1,rinv_SSE1),
2040                                                                   _mm_mul_ps(lij3_SSE1,dr_SSE1))));
2041             t1_SSE2            = _mm_sub_ps(t1_SSE2,
2042                                             _mm_mul_ps(onefourth_SSE,
2043                                                        _mm_add_ps(_mm_mul_ps(lij_SSE2,rinv_SSE2),
2044                                                                   _mm_mul_ps(lij3_SSE2,dr_SSE2))));
2045             t1_SSE3            = _mm_sub_ps(t1_SSE3,
2046                                             _mm_mul_ps(onefourth_SSE,
2047                                                        _mm_add_ps(_mm_mul_ps(lij_SSE3,rinv_SSE3),
2048                                                                   _mm_mul_ps(lij3_SSE3,dr_SSE3))));
2049             t2_SSE0            = _mm_mul_ps(onefourth_SSE,
2050                                             _mm_add_ps(_mm_mul_ps(uij_SSE0,rinv_SSE0),
2051                                                        _mm_mul_ps(uij3_SSE0,dr_SSE0)));
2052             t2_SSE1            = _mm_mul_ps(onefourth_SSE,
2053                                             _mm_add_ps(_mm_mul_ps(uij_SSE1,rinv_SSE1),
2054                                                        _mm_mul_ps(uij3_SSE1,dr_SSE1)));
2055             t2_SSE2            = _mm_mul_ps(onefourth_SSE,
2056                                             _mm_add_ps(_mm_mul_ps(uij_SSE2,rinv_SSE2),
2057                                                        _mm_mul_ps(uij3_SSE2,dr_SSE2)));
2058             t2_SSE3            = _mm_mul_ps(onefourth_SSE,
2059                                             _mm_add_ps(_mm_mul_ps(uij_SSE3,rinv_SSE3),
2060                                                        _mm_mul_ps(uij3_SSE3,dr_SSE3)));
2061             t2_SSE0            = _mm_sub_ps(t2_SSE0,
2062                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE0),
2063                                                        _mm_mul_ps(prod_SSE0,uij3_SSE0)));
2064             t2_SSE1            = _mm_sub_ps(t2_SSE1,
2065                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE1),
2066                                                        _mm_mul_ps(prod_SSE1,uij3_SSE1)));
2067             t2_SSE2            = _mm_sub_ps(t2_SSE2,
2068                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE2),
2069                                                        _mm_mul_ps(prod_SSE2,uij3_SSE2)));
2070             t2_SSE3            = _mm_sub_ps(t2_SSE3,
2071                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE3),
2072                                                        _mm_mul_ps(prod_SSE3,uij3_SSE3)));
2073
2074             t3_SSE0            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE0),
2075                                             _mm_mul_ps(rinv_SSE0,rinv_SSE0));
2076             t3_SSE1            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE1),
2077                                             _mm_mul_ps(rinv_SSE1,rinv_SSE1));
2078             t3_SSE2            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE2),
2079                                             _mm_mul_ps(rinv_SSE2,rinv_SSE2));
2080             t3_SSE3            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE3),
2081                                             _mm_mul_ps(rinv_SSE3,rinv_SSE3));
2082
2083             t3_SSE0            = _mm_sub_ps(t3_SSE0,
2084                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE0,oneeighth_SSE),
2085                                                        _mm_add_ps(one_SSE,
2086                                                                   _mm_mul_ps(sk2_rinv_SSE0,rinv_SSE0))));
2087             t3_SSE1            = _mm_sub_ps(t3_SSE1,
2088                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE1,oneeighth_SSE),
2089                                                        _mm_add_ps(one_SSE,
2090                                                                   _mm_mul_ps(sk2_rinv_SSE1,rinv_SSE1))));
2091             t3_SSE2            = _mm_sub_ps(t3_SSE2,
2092                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE2,oneeighth_SSE),
2093                                                        _mm_add_ps(one_SSE,
2094                                                                   _mm_mul_ps(sk2_rinv_SSE2,rinv_SSE2))));
2095             t3_SSE3            = _mm_sub_ps(t3_SSE3,
2096                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE3,oneeighth_SSE),
2097                                                        _mm_add_ps(one_SSE,
2098                                                                   _mm_mul_ps(sk2_rinv_SSE3,rinv_SSE3))));
2099
2100
2101             t1_SSE0            = _mm_mul_ps(rinv_SSE0,
2102                                             _mm_add_ps(_mm_mul_ps(dlij_SSE0,t1_SSE0),
2103                                                        _mm_add_ps(t2_SSE0,t3_SSE0)));
2104             t1_SSE1            = _mm_mul_ps(rinv_SSE1,
2105                                             _mm_add_ps(_mm_mul_ps(dlij_SSE1,t1_SSE1),
2106                                                        _mm_add_ps(t2_SSE1,t3_SSE1)));
2107             t1_SSE2            = _mm_mul_ps(rinv_SSE2,
2108                                             _mm_add_ps(_mm_mul_ps(dlij_SSE2,t1_SSE2),
2109                                                        _mm_add_ps(t2_SSE2,t3_SSE2)));
2110             t1_SSE3            = _mm_mul_ps(rinv_SSE3,
2111                                             _mm_add_ps(_mm_mul_ps(dlij_SSE3,t1_SSE3),
2112                                                        _mm_add_ps(t2_SSE3,t3_SSE3)));
2113
2114             _mm_store_ps(dadx,_mm_and_ps(t1_SSE0,obc_mask1_SSE0));
2115             dadx += 4;
2116             _mm_store_ps(dadx,_mm_and_ps(t1_SSE1,obc_mask1_SSE1));
2117             dadx += 4;
2118             _mm_store_ps(dadx,_mm_and_ps(t1_SSE2,obc_mask1_SSE2));
2119             dadx += 4;
2120             _mm_store_ps(dadx,_mm_and_ps(t1_SSE3,obc_mask1_SSE3));
2121             dadx += 4;
2122
2123         }
2124
2125         /* Main part, no exclusions */
2126         for(j=nj1; j<nj2; j+=UNROLLJ)
2127         {
2128             /* load j atom coordinates */
2129             jx_SSE            = _mm_load_ps(x_align+j);
2130             jy_SSE            = _mm_load_ps(y_align+j);
2131             jz_SSE            = _mm_load_ps(z_align+j);
2132
2133             /* Calculate distance */
2134             dx_SSE0            = _mm_sub_ps(ix_SSE0,jx_SSE);
2135             dy_SSE0            = _mm_sub_ps(iy_SSE0,jy_SSE);
2136             dz_SSE0            = _mm_sub_ps(iz_SSE0,jz_SSE);
2137             dx_SSE1            = _mm_sub_ps(ix_SSE1,jx_SSE);
2138             dy_SSE1            = _mm_sub_ps(iy_SSE1,jy_SSE);
2139             dz_SSE1            = _mm_sub_ps(iz_SSE1,jz_SSE);
2140             dx_SSE2            = _mm_sub_ps(ix_SSE2,jx_SSE);
2141             dy_SSE2            = _mm_sub_ps(iy_SSE2,jy_SSE);
2142             dz_SSE2            = _mm_sub_ps(iz_SSE2,jz_SSE);
2143             dx_SSE3            = _mm_sub_ps(ix_SSE3,jx_SSE);
2144             dy_SSE3            = _mm_sub_ps(iy_SSE3,jy_SSE);
2145             dz_SSE3            = _mm_sub_ps(iz_SSE3,jz_SSE);
2146
2147             /* rsq = dx*dx+dy*dy+dz*dz */
2148             rsq_SSE0           = gmx_mm_calc_rsq_ps(dx_SSE0,dy_SSE0,dz_SSE0);
2149             rsq_SSE1           = gmx_mm_calc_rsq_ps(dx_SSE1,dy_SSE1,dz_SSE1);
2150             rsq_SSE2           = gmx_mm_calc_rsq_ps(dx_SSE2,dy_SSE2,dz_SSE2);
2151             rsq_SSE3           = gmx_mm_calc_rsq_ps(dx_SSE3,dy_SSE3,dz_SSE3);
2152
2153             /* Calculate 1/r and 1/r2 */
2154             rinv_SSE0          = gmx_mm_invsqrt_ps(rsq_SSE0);
2155             rinv_SSE1          = gmx_mm_invsqrt_ps(rsq_SSE1);
2156             rinv_SSE2          = gmx_mm_invsqrt_ps(rsq_SSE2);
2157             rinv_SSE3          = gmx_mm_invsqrt_ps(rsq_SSE3);
2158
2159             /* Apply mask */
2160             rinv_SSE0          = _mm_and_ps(rinv_SSE0,imask_SSE0);
2161             rinv_SSE1          = _mm_and_ps(rinv_SSE1,imask_SSE1);
2162             rinv_SSE2          = _mm_and_ps(rinv_SSE2,imask_SSE2);
2163             rinv_SSE3          = _mm_and_ps(rinv_SSE3,imask_SSE3);
2164
2165             dr_SSE0            = _mm_mul_ps(rsq_SSE0,rinv_SSE0);
2166             dr_SSE1            = _mm_mul_ps(rsq_SSE1,rinv_SSE1);
2167             dr_SSE2            = _mm_mul_ps(rsq_SSE2,rinv_SSE2);
2168             dr_SSE3            = _mm_mul_ps(rsq_SSE3,rinv_SSE3);
2169
2170             sk_aj_SSE          = _mm_load_ps(obc_param+j);
2171             raj_SSE            = _mm_load_ps(gb_radius+j);
2172
2173             raj_inv_SSE        = gmx_mm_inv_ps(raj_SSE);
2174
2175             /* Evaluate influence of atom aj -> ai */
2176             t1_SSE0            = _mm_add_ps(dr_SSE0,sk_aj_SSE);
2177             t1_SSE1            = _mm_add_ps(dr_SSE1,sk_aj_SSE);
2178             t1_SSE2            = _mm_add_ps(dr_SSE2,sk_aj_SSE);
2179             t1_SSE3            = _mm_add_ps(dr_SSE3,sk_aj_SSE);
2180             t2_SSE0            = _mm_sub_ps(dr_SSE0,sk_aj_SSE);
2181             t2_SSE1            = _mm_sub_ps(dr_SSE1,sk_aj_SSE);
2182             t2_SSE2            = _mm_sub_ps(dr_SSE2,sk_aj_SSE);
2183             t2_SSE3            = _mm_sub_ps(dr_SSE3,sk_aj_SSE);
2184             t3_SSE0            = _mm_sub_ps(sk_aj_SSE,dr_SSE0);
2185             t3_SSE1            = _mm_sub_ps(sk_aj_SSE,dr_SSE1);
2186             t3_SSE2            = _mm_sub_ps(sk_aj_SSE,dr_SSE2);
2187             t3_SSE3            = _mm_sub_ps(sk_aj_SSE,dr_SSE3);
2188
2189             obc_mask1_SSE0     = _mm_cmplt_ps(rai_SSE0, t1_SSE0);
2190             obc_mask1_SSE1     = _mm_cmplt_ps(rai_SSE1, t1_SSE1);
2191             obc_mask1_SSE2     = _mm_cmplt_ps(rai_SSE2, t1_SSE2);
2192             obc_mask1_SSE3     = _mm_cmplt_ps(rai_SSE3, t1_SSE3);
2193             obc_mask2_SSE0     = _mm_cmplt_ps(rai_SSE0, t2_SSE0);
2194             obc_mask2_SSE1     = _mm_cmplt_ps(rai_SSE1, t2_SSE1);
2195             obc_mask2_SSE2     = _mm_cmplt_ps(rai_SSE2, t2_SSE2);
2196             obc_mask2_SSE3     = _mm_cmplt_ps(rai_SSE3, t2_SSE3);
2197             obc_mask3_SSE0     = _mm_cmplt_ps(rai_SSE0, t3_SSE0);
2198             obc_mask3_SSE1     = _mm_cmplt_ps(rai_SSE1, t3_SSE1);
2199             obc_mask3_SSE2     = _mm_cmplt_ps(rai_SSE2, t3_SSE2);
2200             obc_mask3_SSE3     = _mm_cmplt_ps(rai_SSE3, t3_SSE3);
2201             obc_mask1_SSE0     = _mm_and_ps(obc_mask1_SSE0,imask_SSE0);
2202             obc_mask1_SSE1     = _mm_and_ps(obc_mask1_SSE1,imask_SSE1);
2203             obc_mask1_SSE2     = _mm_and_ps(obc_mask1_SSE2,imask_SSE2);
2204             obc_mask1_SSE3     = _mm_and_ps(obc_mask1_SSE3,imask_SSE3);
2205
2206             uij_SSE0           = gmx_mm_inv_ps(t1_SSE0);
2207             uij_SSE1           = gmx_mm_inv_ps(t1_SSE1);
2208             uij_SSE2           = gmx_mm_inv_ps(t1_SSE2);
2209             uij_SSE3           = gmx_mm_inv_ps(t1_SSE3);
2210             lij_SSE0           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE0,gmx_mm_inv_ps(t2_SSE0)),
2211                                            _mm_andnot_ps(obc_mask2_SSE0,rai_inv_SSE0));
2212             lij_SSE1           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE1,gmx_mm_inv_ps(t2_SSE1)),
2213                                            _mm_andnot_ps(obc_mask2_SSE1,rai_inv_SSE1));
2214             lij_SSE2           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE2,gmx_mm_inv_ps(t2_SSE2)),
2215                                            _mm_andnot_ps(obc_mask2_SSE2,rai_inv_SSE2));
2216             lij_SSE3           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE3,gmx_mm_inv_ps(t2_SSE3)),
2217                                            _mm_andnot_ps(obc_mask2_SSE3,rai_inv_SSE3));
2218             dlij_SSE0          = _mm_and_ps(one_SSE,obc_mask2_SSE0);
2219             dlij_SSE1          = _mm_and_ps(one_SSE,obc_mask2_SSE1);
2220             dlij_SSE2          = _mm_and_ps(one_SSE,obc_mask2_SSE2);
2221             dlij_SSE3          = _mm_and_ps(one_SSE,obc_mask2_SSE3);
2222
2223             uij2_SSE0          = _mm_mul_ps(uij_SSE0, uij_SSE0);
2224             uij2_SSE1          = _mm_mul_ps(uij_SSE1, uij_SSE1);
2225             uij2_SSE2          = _mm_mul_ps(uij_SSE2, uij_SSE2);
2226             uij2_SSE3          = _mm_mul_ps(uij_SSE3, uij_SSE3);
2227             uij3_SSE0          = _mm_mul_ps(uij2_SSE0,uij_SSE0);
2228             uij3_SSE1          = _mm_mul_ps(uij2_SSE1,uij_SSE1);
2229             uij3_SSE2          = _mm_mul_ps(uij2_SSE2,uij_SSE2);
2230             uij3_SSE3          = _mm_mul_ps(uij2_SSE3,uij_SSE3);
2231             lij2_SSE0          = _mm_mul_ps(lij_SSE0, lij_SSE0);
2232             lij2_SSE1          = _mm_mul_ps(lij_SSE1, lij_SSE1);
2233             lij2_SSE2          = _mm_mul_ps(lij_SSE2, lij_SSE2);
2234             lij2_SSE3          = _mm_mul_ps(lij_SSE3, lij_SSE3);
2235             lij3_SSE0          = _mm_mul_ps(lij2_SSE0,lij_SSE0);
2236             lij3_SSE1          = _mm_mul_ps(lij2_SSE1,lij_SSE1);
2237             lij3_SSE2          = _mm_mul_ps(lij2_SSE2,lij_SSE2);
2238             lij3_SSE3          = _mm_mul_ps(lij2_SSE3,lij_SSE3);
2239
2240             diff2_SSE0         = _mm_sub_ps(uij2_SSE0,lij2_SSE0);
2241             diff2_SSE1         = _mm_sub_ps(uij2_SSE1,lij2_SSE1);
2242             diff2_SSE2         = _mm_sub_ps(uij2_SSE2,lij2_SSE2);
2243             diff2_SSE3         = _mm_sub_ps(uij2_SSE3,lij2_SSE3);
2244             lij_inv_SSE0       = gmx_mm_invsqrt_ps(lij2_SSE0);
2245             lij_inv_SSE1       = gmx_mm_invsqrt_ps(lij2_SSE1);
2246             lij_inv_SSE2       = gmx_mm_invsqrt_ps(lij2_SSE2);
2247             lij_inv_SSE3       = gmx_mm_invsqrt_ps(lij2_SSE3);
2248             sk2_aj_SSE         = _mm_mul_ps(sk_aj_SSE,sk_aj_SSE);
2249             sk2_rinv_SSE0      = _mm_mul_ps(sk2_aj_SSE,rinv_SSE0);
2250             sk2_rinv_SSE1      = _mm_mul_ps(sk2_aj_SSE,rinv_SSE1);
2251             sk2_rinv_SSE2      = _mm_mul_ps(sk2_aj_SSE,rinv_SSE2);
2252             sk2_rinv_SSE3      = _mm_mul_ps(sk2_aj_SSE,rinv_SSE3);
2253             prod_SSE0          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE0);
2254             prod_SSE1          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE1);
2255             prod_SSE2          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE2);
2256             prod_SSE3          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE3);
2257
2258             logterm_SSE0       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE0,lij_inv_SSE0));
2259             logterm_SSE1       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE1,lij_inv_SSE1));
2260             logterm_SSE2       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE2,lij_inv_SSE2));
2261             logterm_SSE3       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE3,lij_inv_SSE3));
2262
2263             t1_SSE0            = _mm_sub_ps(lij_SSE0,uij_SSE0);
2264             t1_SSE1            = _mm_sub_ps(lij_SSE1,uij_SSE1);
2265             t1_SSE2            = _mm_sub_ps(lij_SSE2,uij_SSE2);
2266             t1_SSE3            = _mm_sub_ps(lij_SSE3,uij_SSE3);
2267             t2_SSE0            = _mm_mul_ps(diff2_SSE0,
2268                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE0),
2269                                                        prod_SSE0));
2270             t2_SSE1            = _mm_mul_ps(diff2_SSE1,
2271                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE1),
2272                                                        prod_SSE1));
2273             t2_SSE2            = _mm_mul_ps(diff2_SSE2,
2274                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE2),
2275                                                        prod_SSE2));
2276             t2_SSE3            = _mm_mul_ps(diff2_SSE3,
2277                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE3),
2278                                                        prod_SSE3));
2279
2280             t3_SSE0            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE0,logterm_SSE0));
2281             t3_SSE1            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE1,logterm_SSE1));
2282             t3_SSE2            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE2,logterm_SSE2));
2283             t3_SSE3            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE3,logterm_SSE3));
2284             t1_SSE0            = _mm_add_ps(t1_SSE0,_mm_add_ps(t2_SSE0,t3_SSE0));
2285             t1_SSE1            = _mm_add_ps(t1_SSE1,_mm_add_ps(t2_SSE1,t3_SSE1));
2286             t1_SSE2            = _mm_add_ps(t1_SSE2,_mm_add_ps(t2_SSE2,t3_SSE2));
2287             t1_SSE3            = _mm_add_ps(t1_SSE3,_mm_add_ps(t2_SSE3,t3_SSE3));
2288             t4_SSE0            = _mm_mul_ps(two_SSE,_mm_sub_ps(rai_inv_SSE0,lij_SSE0));
2289             t4_SSE1            = _mm_mul_ps(two_SSE,_mm_sub_ps(rai_inv_SSE1,lij_SSE1));
2290             t4_SSE2            = _mm_mul_ps(two_SSE,_mm_sub_ps(rai_inv_SSE2,lij_SSE2));
2291             t4_SSE3            = _mm_mul_ps(two_SSE,_mm_sub_ps(rai_inv_SSE3,lij_SSE3));
2292             t4_SSE0            = _mm_and_ps(t4_SSE0,obc_mask3_SSE0);
2293             t4_SSE1            = _mm_and_ps(t4_SSE1,obc_mask3_SSE1);
2294             t4_SSE2            = _mm_and_ps(t4_SSE2,obc_mask3_SSE2);
2295             t4_SSE3            = _mm_and_ps(t4_SSE3,obc_mask3_SSE3);
2296             t1_SSE0            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE0,t4_SSE0));
2297             t1_SSE1            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE1,t4_SSE1));
2298             t1_SSE2            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE2,t4_SSE2));
2299             t1_SSE3            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE3,t4_SSE3));
2300
2301             sum_ai_SSE0        = _mm_add_ps(sum_ai_SSE0,_mm_and_ps(t1_SSE0,obc_mask1_SSE0));
2302             sum_ai_SSE1        = _mm_add_ps(sum_ai_SSE1,_mm_and_ps(t1_SSE1,obc_mask1_SSE1));
2303             sum_ai_SSE2        = _mm_add_ps(sum_ai_SSE2,_mm_and_ps(t1_SSE2,obc_mask1_SSE2));
2304             sum_ai_SSE3        = _mm_add_ps(sum_ai_SSE3,_mm_and_ps(t1_SSE3,obc_mask1_SSE3));
2305
2306             t1_SSE0            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE0),
2307                                             _mm_mul_ps(prod_SSE0,lij3_SSE0));
2308             t1_SSE1            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE1),
2309                                             _mm_mul_ps(prod_SSE1,lij3_SSE1));
2310             t1_SSE2            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE2),
2311                                             _mm_mul_ps(prod_SSE2,lij3_SSE2));
2312             t1_SSE3            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE3),
2313                                             _mm_mul_ps(prod_SSE3,lij3_SSE3));
2314             t1_SSE0            = _mm_sub_ps(t1_SSE0,
2315                                             _mm_mul_ps(onefourth_SSE,
2316                                                        _mm_add_ps(_mm_mul_ps(lij_SSE0,rinv_SSE0),
2317                                                                   _mm_mul_ps(lij3_SSE0,dr_SSE0))));
2318             t1_SSE1            = _mm_sub_ps(t1_SSE1,
2319                                             _mm_mul_ps(onefourth_SSE,
2320                                                        _mm_add_ps(_mm_mul_ps(lij_SSE1,rinv_SSE1),
2321                                                                   _mm_mul_ps(lij3_SSE1,dr_SSE1))));
2322             t1_SSE2            = _mm_sub_ps(t1_SSE2,
2323                                             _mm_mul_ps(onefourth_SSE,
2324                                                        _mm_add_ps(_mm_mul_ps(lij_SSE2,rinv_SSE2),
2325                                                                   _mm_mul_ps(lij3_SSE2,dr_SSE2))));
2326             t1_SSE3            = _mm_sub_ps(t1_SSE3,
2327                                             _mm_mul_ps(onefourth_SSE,
2328                                                        _mm_add_ps(_mm_mul_ps(lij_SSE3,rinv_SSE3),
2329                                                                   _mm_mul_ps(lij3_SSE3,dr_SSE3))));
2330
2331             t2_SSE0            = _mm_mul_ps(onefourth_SSE,
2332                                             _mm_add_ps(_mm_mul_ps(uij_SSE0,rinv_SSE0),
2333                                                        _mm_mul_ps(uij3_SSE0,dr_SSE0)));
2334             t2_SSE1            = _mm_mul_ps(onefourth_SSE,
2335                                             _mm_add_ps(_mm_mul_ps(uij_SSE1,rinv_SSE1),
2336                                                        _mm_mul_ps(uij3_SSE1,dr_SSE1)));
2337             t2_SSE2            = _mm_mul_ps(onefourth_SSE,
2338                                             _mm_add_ps(_mm_mul_ps(uij_SSE2,rinv_SSE2),
2339                                                        _mm_mul_ps(uij3_SSE2,dr_SSE2)));
2340             t2_SSE3            = _mm_mul_ps(onefourth_SSE,
2341                                             _mm_add_ps(_mm_mul_ps(uij_SSE3,rinv_SSE3),
2342                                                        _mm_mul_ps(uij3_SSE3,dr_SSE3)));
2343             t2_SSE0            = _mm_sub_ps(t2_SSE0,
2344                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE0),
2345                                                        _mm_mul_ps(prod_SSE0,uij3_SSE0)));
2346             t2_SSE1            = _mm_sub_ps(t2_SSE1,
2347                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE1),
2348                                                        _mm_mul_ps(prod_SSE1,uij3_SSE1)));
2349             t2_SSE2            = _mm_sub_ps(t2_SSE2,
2350                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE2),
2351                                                        _mm_mul_ps(prod_SSE2,uij3_SSE2)));
2352             t2_SSE3            = _mm_sub_ps(t2_SSE3,
2353                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE3),
2354                                                        _mm_mul_ps(prod_SSE3,uij3_SSE3)));
2355             t3_SSE0            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE0),
2356                                             _mm_mul_ps(rinv_SSE0,rinv_SSE0));
2357             t3_SSE1            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE1),
2358                                             _mm_mul_ps(rinv_SSE1,rinv_SSE1));
2359             t3_SSE2            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE2),
2360                                             _mm_mul_ps(rinv_SSE2,rinv_SSE2));
2361             t3_SSE3            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE3),
2362                                             _mm_mul_ps(rinv_SSE3,rinv_SSE3));
2363             t3_SSE0            = _mm_sub_ps(t3_SSE0,
2364                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE0,oneeighth_SSE),
2365                                                        _mm_add_ps(one_SSE,
2366                                                                   _mm_mul_ps(sk2_rinv_SSE0,rinv_SSE0))));
2367             t3_SSE1            = _mm_sub_ps(t3_SSE1,
2368                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE1,oneeighth_SSE),
2369                                                        _mm_add_ps(one_SSE,
2370                                                                   _mm_mul_ps(sk2_rinv_SSE1,rinv_SSE1))));
2371             t3_SSE2            = _mm_sub_ps(t3_SSE2,
2372                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE2,oneeighth_SSE),
2373                                                        _mm_add_ps(one_SSE,
2374                                                                   _mm_mul_ps(sk2_rinv_SSE2,rinv_SSE2))));
2375             t3_SSE3            = _mm_sub_ps(t3_SSE3,
2376                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE3,oneeighth_SSE),
2377                                                        _mm_add_ps(one_SSE,
2378                                                                   _mm_mul_ps(sk2_rinv_SSE3,rinv_SSE3))));
2379
2380             t1_SSE0            = _mm_mul_ps(rinv_SSE0,
2381                                             _mm_add_ps(_mm_mul_ps(dlij_SSE0,t1_SSE0),
2382                                                        _mm_add_ps(t2_SSE0,t3_SSE0)));
2383             t1_SSE1            = _mm_mul_ps(rinv_SSE1,
2384                                             _mm_add_ps(_mm_mul_ps(dlij_SSE1,t1_SSE1),
2385                                                        _mm_add_ps(t2_SSE1,t3_SSE1)));
2386             t1_SSE2            = _mm_mul_ps(rinv_SSE2,
2387                                             _mm_add_ps(_mm_mul_ps(dlij_SSE2,t1_SSE2),
2388                                                        _mm_add_ps(t2_SSE2,t3_SSE2)));
2389             t1_SSE3            = _mm_mul_ps(rinv_SSE3,
2390                                             _mm_add_ps(_mm_mul_ps(dlij_SSE3,t1_SSE3),
2391                                                        _mm_add_ps(t2_SSE3,t3_SSE3)));
2392
2393             _mm_store_ps(dadx,_mm_and_ps(t1_SSE0,obc_mask1_SSE0));
2394             dadx += 4;
2395             _mm_store_ps(dadx,_mm_and_ps(t1_SSE1,obc_mask1_SSE1));
2396             dadx += 4;
2397             _mm_store_ps(dadx,_mm_and_ps(t1_SSE2,obc_mask1_SSE2));
2398             dadx += 4;
2399             _mm_store_ps(dadx,_mm_and_ps(t1_SSE3,obc_mask1_SSE3));
2400             dadx += 4;
2401
2402             /* Evaluate influence of atom ai -> aj */
2403             t1_SSE0            = _mm_add_ps(dr_SSE0,sk_ai_SSE0);
2404             t1_SSE1            = _mm_add_ps(dr_SSE1,sk_ai_SSE1);
2405             t1_SSE2            = _mm_add_ps(dr_SSE2,sk_ai_SSE2);
2406             t1_SSE3            = _mm_add_ps(dr_SSE3,sk_ai_SSE3);
2407             t2_SSE0            = _mm_sub_ps(dr_SSE0,sk_ai_SSE0);
2408             t2_SSE1            = _mm_sub_ps(dr_SSE1,sk_ai_SSE1);
2409             t2_SSE2            = _mm_sub_ps(dr_SSE2,sk_ai_SSE2);
2410             t2_SSE3            = _mm_sub_ps(dr_SSE3,sk_ai_SSE3);
2411             t3_SSE0            = _mm_sub_ps(sk_ai_SSE0,dr_SSE0);
2412             t3_SSE1            = _mm_sub_ps(sk_ai_SSE1,dr_SSE1);
2413             t3_SSE2            = _mm_sub_ps(sk_ai_SSE2,dr_SSE2);
2414             t3_SSE3            = _mm_sub_ps(sk_ai_SSE3,dr_SSE3);
2415
2416             obc_mask1_SSE0     = _mm_cmplt_ps(raj_SSE, t1_SSE0);
2417             obc_mask1_SSE1     = _mm_cmplt_ps(raj_SSE, t1_SSE1);
2418             obc_mask1_SSE2     = _mm_cmplt_ps(raj_SSE, t1_SSE2);
2419             obc_mask1_SSE3     = _mm_cmplt_ps(raj_SSE, t1_SSE3);
2420             obc_mask2_SSE0     = _mm_cmplt_ps(raj_SSE, t2_SSE0);
2421             obc_mask2_SSE1     = _mm_cmplt_ps(raj_SSE, t2_SSE1);
2422             obc_mask2_SSE2     = _mm_cmplt_ps(raj_SSE, t2_SSE2);
2423             obc_mask2_SSE3     = _mm_cmplt_ps(raj_SSE, t2_SSE3);
2424             obc_mask3_SSE0     = _mm_cmplt_ps(raj_SSE, t3_SSE0);
2425             obc_mask3_SSE1     = _mm_cmplt_ps(raj_SSE, t3_SSE1);
2426             obc_mask3_SSE2     = _mm_cmplt_ps(raj_SSE, t3_SSE2);
2427             obc_mask3_SSE3     = _mm_cmplt_ps(raj_SSE, t3_SSE3);
2428             obc_mask1_SSE0     = _mm_and_ps(obc_mask1_SSE0,imask_SSE0);
2429             obc_mask1_SSE1     = _mm_and_ps(obc_mask1_SSE1,imask_SSE1);
2430             obc_mask1_SSE2     = _mm_and_ps(obc_mask1_SSE2,imask_SSE2);
2431             obc_mask1_SSE3     = _mm_and_ps(obc_mask1_SSE3,imask_SSE3);
2432
2433             uij_SSE0           = gmx_mm_inv_ps(t1_SSE0);
2434             uij_SSE1           = gmx_mm_inv_ps(t1_SSE1);
2435             uij_SSE2           = gmx_mm_inv_ps(t1_SSE2);
2436             uij_SSE3           = gmx_mm_inv_ps(t1_SSE3);
2437             lij_SSE0           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE0,gmx_mm_inv_ps(t2_SSE0)),
2438                                            _mm_andnot_ps(obc_mask2_SSE0,raj_inv_SSE));
2439             lij_SSE1           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE1,gmx_mm_inv_ps(t2_SSE1)),
2440                                            _mm_andnot_ps(obc_mask2_SSE1,raj_inv_SSE));
2441             lij_SSE2           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE2,gmx_mm_inv_ps(t2_SSE2)),
2442                                            _mm_andnot_ps(obc_mask2_SSE2,raj_inv_SSE));
2443             lij_SSE3           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE3,gmx_mm_inv_ps(t2_SSE3)),
2444                                            _mm_andnot_ps(obc_mask2_SSE3,raj_inv_SSE));
2445             dlij_SSE0          = _mm_and_ps(one_SSE,obc_mask2_SSE0);
2446             dlij_SSE1          = _mm_and_ps(one_SSE,obc_mask2_SSE1);
2447             dlij_SSE2          = _mm_and_ps(one_SSE,obc_mask2_SSE2);
2448             dlij_SSE3          = _mm_and_ps(one_SSE,obc_mask2_SSE3);
2449
2450             uij2_SSE0          = _mm_mul_ps(uij_SSE0, uij_SSE0);
2451             uij2_SSE1          = _mm_mul_ps(uij_SSE1, uij_SSE1);
2452             uij2_SSE2          = _mm_mul_ps(uij_SSE2, uij_SSE2);
2453             uij2_SSE3          = _mm_mul_ps(uij_SSE3, uij_SSE3);
2454             uij3_SSE0          = _mm_mul_ps(uij2_SSE0,uij_SSE0);
2455             uij3_SSE1          = _mm_mul_ps(uij2_SSE1,uij_SSE1);
2456             uij3_SSE2          = _mm_mul_ps(uij2_SSE2,uij_SSE2);
2457             uij3_SSE3          = _mm_mul_ps(uij2_SSE3,uij_SSE3);
2458             lij2_SSE0          = _mm_mul_ps(lij_SSE0, lij_SSE0);
2459             lij2_SSE1          = _mm_mul_ps(lij_SSE1, lij_SSE1);
2460             lij2_SSE2          = _mm_mul_ps(lij_SSE2, lij_SSE2);
2461             lij2_SSE3          = _mm_mul_ps(lij_SSE3, lij_SSE3);
2462             lij3_SSE0          = _mm_mul_ps(lij2_SSE0,lij_SSE0);
2463             lij3_SSE1          = _mm_mul_ps(lij2_SSE1,lij_SSE1);
2464             lij3_SSE2          = _mm_mul_ps(lij2_SSE2,lij_SSE2);
2465             lij3_SSE3          = _mm_mul_ps(lij2_SSE3,lij_SSE3);
2466
2467             diff2_SSE0         = _mm_sub_ps(uij2_SSE0,lij2_SSE0);
2468             diff2_SSE1         = _mm_sub_ps(uij2_SSE1,lij2_SSE1);
2469             diff2_SSE2         = _mm_sub_ps(uij2_SSE2,lij2_SSE2);
2470             diff2_SSE3         = _mm_sub_ps(uij2_SSE3,lij2_SSE3);
2471             lij_inv_SSE0       = gmx_mm_invsqrt_ps(lij2_SSE0);
2472             lij_inv_SSE1       = gmx_mm_invsqrt_ps(lij2_SSE1);
2473             lij_inv_SSE2       = gmx_mm_invsqrt_ps(lij2_SSE2);
2474             lij_inv_SSE3       = gmx_mm_invsqrt_ps(lij2_SSE3);
2475             sk2_rinv_SSE0      = _mm_mul_ps(sk2_ai_SSE0,rinv_SSE0);
2476             sk2_rinv_SSE1      = _mm_mul_ps(sk2_ai_SSE1,rinv_SSE1);
2477             sk2_rinv_SSE2      = _mm_mul_ps(sk2_ai_SSE2,rinv_SSE2);
2478             sk2_rinv_SSE3      = _mm_mul_ps(sk2_ai_SSE3,rinv_SSE3);
2479             prod_SSE0          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE0);
2480             prod_SSE1          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE1);
2481             prod_SSE2          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE2);
2482             prod_SSE3          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE3);
2483
2484             logterm_SSE0       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE0,lij_inv_SSE0));
2485             logterm_SSE1       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE1,lij_inv_SSE1));
2486             logterm_SSE2       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE2,lij_inv_SSE2));
2487             logterm_SSE3       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE3,lij_inv_SSE3));
2488             t1_SSE0            = _mm_sub_ps(lij_SSE0,uij_SSE0);
2489             t1_SSE1            = _mm_sub_ps(lij_SSE1,uij_SSE1);
2490             t1_SSE2            = _mm_sub_ps(lij_SSE2,uij_SSE2);
2491             t1_SSE3            = _mm_sub_ps(lij_SSE3,uij_SSE3);
2492             t2_SSE0            = _mm_mul_ps(diff2_SSE0,
2493                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE0),
2494                                                        prod_SSE0));
2495             t2_SSE1            = _mm_mul_ps(diff2_SSE1,
2496                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE1),
2497                                                        prod_SSE1));
2498             t2_SSE2            = _mm_mul_ps(diff2_SSE2,
2499                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE2),
2500                                                        prod_SSE2));
2501             t2_SSE3            = _mm_mul_ps(diff2_SSE3,
2502                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE3),
2503                                                        prod_SSE3));
2504             t3_SSE0            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE0,logterm_SSE0));
2505             t3_SSE1            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE1,logterm_SSE1));
2506             t3_SSE2            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE2,logterm_SSE2));
2507             t3_SSE3            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE3,logterm_SSE3));
2508             t1_SSE0            = _mm_add_ps(t1_SSE0,_mm_add_ps(t2_SSE0,t3_SSE0));
2509             t1_SSE1            = _mm_add_ps(t1_SSE1,_mm_add_ps(t2_SSE1,t3_SSE1));
2510             t1_SSE2            = _mm_add_ps(t1_SSE2,_mm_add_ps(t2_SSE2,t3_SSE2));
2511             t1_SSE3            = _mm_add_ps(t1_SSE3,_mm_add_ps(t2_SSE3,t3_SSE3));
2512             t4_SSE0            = _mm_mul_ps(two_SSE,_mm_sub_ps(raj_inv_SSE,lij_SSE0));
2513             t4_SSE1            = _mm_mul_ps(two_SSE,_mm_sub_ps(raj_inv_SSE,lij_SSE1));
2514             t4_SSE2            = _mm_mul_ps(two_SSE,_mm_sub_ps(raj_inv_SSE,lij_SSE2));
2515             t4_SSE3            = _mm_mul_ps(two_SSE,_mm_sub_ps(raj_inv_SSE,lij_SSE3));
2516             t4_SSE0            = _mm_and_ps(t4_SSE0,obc_mask3_SSE0);
2517             t4_SSE1            = _mm_and_ps(t4_SSE1,obc_mask3_SSE1);
2518             t4_SSE2            = _mm_and_ps(t4_SSE2,obc_mask3_SSE2);
2519             t4_SSE3            = _mm_and_ps(t4_SSE3,obc_mask3_SSE3);
2520             t1_SSE0            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE0,t4_SSE0));
2521             t1_SSE1            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE1,t4_SSE1));
2522             t1_SSE2            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE2,t4_SSE2));
2523             t1_SSE3            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE3,t4_SSE3));
2524
2525             _mm_store_ps(work+j, _mm_add_ps(_mm_load_ps(work+j),
2526                                             gmx_mm_sum4_ps(_mm_and_ps(t1_SSE0,obc_mask1_SSE0),
2527                                                         _mm_and_ps(t1_SSE1,obc_mask1_SSE1),
2528                                                         _mm_and_ps(t1_SSE2,obc_mask1_SSE2),
2529                                                         _mm_and_ps(t1_SSE3,obc_mask1_SSE3))));
2530
2531             t1_SSE0            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE0),
2532                                             _mm_mul_ps(prod_SSE0,lij3_SSE0));
2533             t1_SSE1            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE1),
2534                                             _mm_mul_ps(prod_SSE1,lij3_SSE1));
2535             t1_SSE2            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE2),
2536                                             _mm_mul_ps(prod_SSE2,lij3_SSE2));
2537             t1_SSE3            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE3),
2538                                             _mm_mul_ps(prod_SSE3,lij3_SSE3));
2539             t1_SSE0            = _mm_sub_ps(t1_SSE0,
2540                                             _mm_mul_ps(onefourth_SSE,
2541                                                        _mm_add_ps(_mm_mul_ps(lij_SSE0,rinv_SSE0),
2542                                                                   _mm_mul_ps(lij3_SSE0,dr_SSE0))));
2543             t1_SSE1            = _mm_sub_ps(t1_SSE1,
2544                                             _mm_mul_ps(onefourth_SSE,
2545                                                        _mm_add_ps(_mm_mul_ps(lij_SSE1,rinv_SSE1),
2546                                                                   _mm_mul_ps(lij3_SSE1,dr_SSE1))));
2547             t1_SSE2            = _mm_sub_ps(t1_SSE2,
2548                                             _mm_mul_ps(onefourth_SSE,
2549                                                        _mm_add_ps(_mm_mul_ps(lij_SSE2,rinv_SSE2),
2550                                                                   _mm_mul_ps(lij3_SSE2,dr_SSE2))));
2551             t1_SSE3            = _mm_sub_ps(t1_SSE3,
2552                                             _mm_mul_ps(onefourth_SSE,
2553                                                        _mm_add_ps(_mm_mul_ps(lij_SSE3,rinv_SSE3),
2554                                                                   _mm_mul_ps(lij3_SSE3,dr_SSE3))));
2555             t2_SSE0            = _mm_mul_ps(onefourth_SSE,
2556                                             _mm_add_ps(_mm_mul_ps(uij_SSE0,rinv_SSE0),
2557                                                        _mm_mul_ps(uij3_SSE0,dr_SSE0)));
2558             t2_SSE1            = _mm_mul_ps(onefourth_SSE,
2559                                             _mm_add_ps(_mm_mul_ps(uij_SSE1,rinv_SSE1),
2560                                                        _mm_mul_ps(uij3_SSE1,dr_SSE1)));
2561             t2_SSE2            = _mm_mul_ps(onefourth_SSE,
2562                                             _mm_add_ps(_mm_mul_ps(uij_SSE2,rinv_SSE2),
2563                                                        _mm_mul_ps(uij3_SSE2,dr_SSE2)));
2564             t2_SSE3            = _mm_mul_ps(onefourth_SSE,
2565                                             _mm_add_ps(_mm_mul_ps(uij_SSE3,rinv_SSE3),
2566                                                        _mm_mul_ps(uij3_SSE3,dr_SSE3)));
2567             t2_SSE0            = _mm_sub_ps(t2_SSE0,
2568                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE0),
2569                                                        _mm_mul_ps(prod_SSE0,uij3_SSE0)));
2570             t2_SSE1            = _mm_sub_ps(t2_SSE1,
2571                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE1),
2572                                                        _mm_mul_ps(prod_SSE1,uij3_SSE1)));
2573             t2_SSE2            = _mm_sub_ps(t2_SSE2,
2574                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE2),
2575                                                        _mm_mul_ps(prod_SSE2,uij3_SSE2)));
2576             t2_SSE3            = _mm_sub_ps(t2_SSE3,
2577                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE3),
2578                                                        _mm_mul_ps(prod_SSE3,uij3_SSE3)));
2579
2580             t3_SSE0            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE0),
2581                                             _mm_mul_ps(rinv_SSE0,rinv_SSE0));
2582             t3_SSE1            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE1),
2583                                             _mm_mul_ps(rinv_SSE1,rinv_SSE1));
2584             t3_SSE2            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE2),
2585                                             _mm_mul_ps(rinv_SSE2,rinv_SSE2));
2586             t3_SSE3            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE3),
2587                                             _mm_mul_ps(rinv_SSE3,rinv_SSE3));
2588
2589             t3_SSE0            = _mm_sub_ps(t3_SSE0,
2590                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE0,oneeighth_SSE),
2591                                                        _mm_add_ps(one_SSE,
2592                                                                   _mm_mul_ps(sk2_rinv_SSE0,rinv_SSE0))));
2593             t3_SSE1            = _mm_sub_ps(t3_SSE1,
2594                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE1,oneeighth_SSE),
2595                                                        _mm_add_ps(one_SSE,
2596                                                                   _mm_mul_ps(sk2_rinv_SSE1,rinv_SSE1))));
2597             t3_SSE2            = _mm_sub_ps(t3_SSE2,
2598                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE2,oneeighth_SSE),
2599                                                        _mm_add_ps(one_SSE,
2600                                                                   _mm_mul_ps(sk2_rinv_SSE2,rinv_SSE2))));
2601             t3_SSE3            = _mm_sub_ps(t3_SSE3,
2602                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE3,oneeighth_SSE),
2603                                                        _mm_add_ps(one_SSE,
2604                                                                   _mm_mul_ps(sk2_rinv_SSE3,rinv_SSE3))));
2605
2606             t1_SSE0            = _mm_mul_ps(rinv_SSE0,
2607                                             _mm_add_ps(_mm_mul_ps(dlij_SSE0,t1_SSE0),
2608                                                        _mm_add_ps(t2_SSE0,t3_SSE0)));
2609             t1_SSE1            = _mm_mul_ps(rinv_SSE1,
2610                                             _mm_add_ps(_mm_mul_ps(dlij_SSE1,t1_SSE1),
2611                                                        _mm_add_ps(t2_SSE1,t3_SSE1)));
2612             t1_SSE2            = _mm_mul_ps(rinv_SSE2,
2613                                             _mm_add_ps(_mm_mul_ps(dlij_SSE2,t1_SSE2),
2614                                                        _mm_add_ps(t2_SSE2,t3_SSE2)));
2615             t1_SSE3            = _mm_mul_ps(rinv_SSE3,
2616                                             _mm_add_ps(_mm_mul_ps(dlij_SSE3,t1_SSE3),
2617                                                        _mm_add_ps(t2_SSE3,t3_SSE3)));
2618
2619             _mm_store_ps(dadx,_mm_and_ps(t1_SSE0,obc_mask1_SSE0));
2620             dadx += 4;
2621             _mm_store_ps(dadx,_mm_and_ps(t1_SSE1,obc_mask1_SSE1));
2622             dadx += 4;
2623             _mm_store_ps(dadx,_mm_and_ps(t1_SSE2,obc_mask1_SSE2));
2624             dadx += 4;
2625             _mm_store_ps(dadx,_mm_and_ps(t1_SSE3,obc_mask1_SSE3));
2626             dadx += 4;
2627         }
2628
2629         /* Epilogue part, including exclusion mask */
2630         for(j=nj2; j<nj3; j+=UNROLLJ)
2631         {
2632             jmask_SSE0 = _mm_load_ps((real *)emask0);
2633             jmask_SSE1 = _mm_load_ps((real *)emask1);
2634             jmask_SSE2 = _mm_load_ps((real *)emask2);
2635             jmask_SSE3 = _mm_load_ps((real *)emask3);
2636             emask0 += UNROLLJ;
2637             emask1 += UNROLLJ;
2638             emask2 += UNROLLJ;
2639             emask3 += UNROLLJ;
2640
2641             /* load j atom coordinates */
2642             jx_SSE            = _mm_load_ps(x_align+j);
2643             jy_SSE            = _mm_load_ps(y_align+j);
2644             jz_SSE            = _mm_load_ps(z_align+j);
2645
2646             /* Calculate distance */
2647             dx_SSE0            = _mm_sub_ps(ix_SSE0,jx_SSE);
2648             dy_SSE0            = _mm_sub_ps(iy_SSE0,jy_SSE);
2649             dz_SSE0            = _mm_sub_ps(iz_SSE0,jz_SSE);
2650             dx_SSE1            = _mm_sub_ps(ix_SSE1,jx_SSE);
2651             dy_SSE1            = _mm_sub_ps(iy_SSE1,jy_SSE);
2652             dz_SSE1            = _mm_sub_ps(iz_SSE1,jz_SSE);
2653             dx_SSE2            = _mm_sub_ps(ix_SSE2,jx_SSE);
2654             dy_SSE2            = _mm_sub_ps(iy_SSE2,jy_SSE);
2655             dz_SSE2            = _mm_sub_ps(iz_SSE2,jz_SSE);
2656             dx_SSE3            = _mm_sub_ps(ix_SSE3,jx_SSE);
2657             dy_SSE3            = _mm_sub_ps(iy_SSE3,jy_SSE);
2658             dz_SSE3            = _mm_sub_ps(iz_SSE3,jz_SSE);
2659
2660             /* rsq = dx*dx+dy*dy+dz*dz */
2661             rsq_SSE0           = gmx_mm_calc_rsq_ps(dx_SSE0,dy_SSE0,dz_SSE0);
2662             rsq_SSE1           = gmx_mm_calc_rsq_ps(dx_SSE1,dy_SSE1,dz_SSE1);
2663             rsq_SSE2           = gmx_mm_calc_rsq_ps(dx_SSE2,dy_SSE2,dz_SSE2);
2664             rsq_SSE3           = gmx_mm_calc_rsq_ps(dx_SSE3,dy_SSE3,dz_SSE3);
2665
2666             /* Combine masks */
2667             jmask_SSE0         = _mm_and_ps(jmask_SSE0,imask_SSE0);
2668             jmask_SSE1         = _mm_and_ps(jmask_SSE1,imask_SSE1);
2669             jmask_SSE2         = _mm_and_ps(jmask_SSE2,imask_SSE2);
2670             jmask_SSE3         = _mm_and_ps(jmask_SSE3,imask_SSE3);
2671
2672             /* Calculate 1/r and 1/r2 */
2673             rinv_SSE0          = gmx_mm_invsqrt_ps(rsq_SSE0);
2674             rinv_SSE1          = gmx_mm_invsqrt_ps(rsq_SSE1);
2675             rinv_SSE2          = gmx_mm_invsqrt_ps(rsq_SSE2);
2676             rinv_SSE3          = gmx_mm_invsqrt_ps(rsq_SSE3);
2677
2678             /* Apply mask */
2679             rinv_SSE0          = _mm_and_ps(rinv_SSE0,jmask_SSE0);
2680             rinv_SSE1          = _mm_and_ps(rinv_SSE1,jmask_SSE1);
2681             rinv_SSE2          = _mm_and_ps(rinv_SSE2,jmask_SSE2);
2682             rinv_SSE3          = _mm_and_ps(rinv_SSE3,jmask_SSE3);
2683
2684             dr_SSE0            = _mm_mul_ps(rsq_SSE0,rinv_SSE0);
2685             dr_SSE1            = _mm_mul_ps(rsq_SSE1,rinv_SSE1);
2686             dr_SSE2            = _mm_mul_ps(rsq_SSE2,rinv_SSE2);
2687             dr_SSE3            = _mm_mul_ps(rsq_SSE3,rinv_SSE3);
2688
2689             sk_aj_SSE          = _mm_load_ps(obc_param+j);
2690             raj_SSE            = _mm_load_ps(gb_radius+j);
2691
2692             raj_inv_SSE        = gmx_mm_inv_ps(raj_SSE);
2693
2694             /* Evaluate influence of atom aj -> ai */
2695             t1_SSE0            = _mm_add_ps(dr_SSE0,sk_aj_SSE);
2696             t1_SSE1            = _mm_add_ps(dr_SSE1,sk_aj_SSE);
2697             t1_SSE2            = _mm_add_ps(dr_SSE2,sk_aj_SSE);
2698             t1_SSE3            = _mm_add_ps(dr_SSE3,sk_aj_SSE);
2699             t2_SSE0            = _mm_sub_ps(dr_SSE0,sk_aj_SSE);
2700             t2_SSE1            = _mm_sub_ps(dr_SSE1,sk_aj_SSE);
2701             t2_SSE2            = _mm_sub_ps(dr_SSE2,sk_aj_SSE);
2702             t2_SSE3            = _mm_sub_ps(dr_SSE3,sk_aj_SSE);
2703             t3_SSE0            = _mm_sub_ps(sk_aj_SSE,dr_SSE0);
2704             t3_SSE1            = _mm_sub_ps(sk_aj_SSE,dr_SSE1);
2705             t3_SSE2            = _mm_sub_ps(sk_aj_SSE,dr_SSE2);
2706             t3_SSE3            = _mm_sub_ps(sk_aj_SSE,dr_SSE3);
2707
2708             obc_mask1_SSE0     = _mm_cmplt_ps(rai_SSE0, t1_SSE0);
2709             obc_mask1_SSE1     = _mm_cmplt_ps(rai_SSE1, t1_SSE1);
2710             obc_mask1_SSE2     = _mm_cmplt_ps(rai_SSE2, t1_SSE2);
2711             obc_mask1_SSE3     = _mm_cmplt_ps(rai_SSE3, t1_SSE3);
2712             obc_mask2_SSE0     = _mm_cmplt_ps(rai_SSE0, t2_SSE0);
2713             obc_mask2_SSE1     = _mm_cmplt_ps(rai_SSE1, t2_SSE1);
2714             obc_mask2_SSE2     = _mm_cmplt_ps(rai_SSE2, t2_SSE2);
2715             obc_mask2_SSE3     = _mm_cmplt_ps(rai_SSE3, t2_SSE3);
2716             obc_mask3_SSE0     = _mm_cmplt_ps(rai_SSE0, t3_SSE0);
2717             obc_mask3_SSE1     = _mm_cmplt_ps(rai_SSE1, t3_SSE1);
2718             obc_mask3_SSE2     = _mm_cmplt_ps(rai_SSE2, t3_SSE2);
2719             obc_mask3_SSE3     = _mm_cmplt_ps(rai_SSE3, t3_SSE3);
2720             obc_mask1_SSE0     = _mm_and_ps(obc_mask1_SSE0,jmask_SSE0);
2721             obc_mask1_SSE1     = _mm_and_ps(obc_mask1_SSE1,jmask_SSE1);
2722             obc_mask1_SSE2     = _mm_and_ps(obc_mask1_SSE2,jmask_SSE2);
2723             obc_mask1_SSE3     = _mm_and_ps(obc_mask1_SSE3,jmask_SSE3);
2724
2725             uij_SSE0           = gmx_mm_inv_ps(t1_SSE0);
2726             uij_SSE1           = gmx_mm_inv_ps(t1_SSE1);
2727             uij_SSE2           = gmx_mm_inv_ps(t1_SSE2);
2728             uij_SSE3           = gmx_mm_inv_ps(t1_SSE3);
2729             lij_SSE0           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE0,gmx_mm_inv_ps(t2_SSE0)),
2730                                            _mm_andnot_ps(obc_mask2_SSE0,rai_inv_SSE0));
2731             lij_SSE1           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE1,gmx_mm_inv_ps(t2_SSE1)),
2732                                            _mm_andnot_ps(obc_mask2_SSE1,rai_inv_SSE1));
2733             lij_SSE2           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE2,gmx_mm_inv_ps(t2_SSE2)),
2734                                            _mm_andnot_ps(obc_mask2_SSE2,rai_inv_SSE2));
2735             lij_SSE3           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE3,gmx_mm_inv_ps(t2_SSE3)),
2736                                            _mm_andnot_ps(obc_mask2_SSE3,rai_inv_SSE3));
2737             dlij_SSE0          = _mm_and_ps(one_SSE,obc_mask2_SSE0);
2738             dlij_SSE1          = _mm_and_ps(one_SSE,obc_mask2_SSE1);
2739             dlij_SSE2          = _mm_and_ps(one_SSE,obc_mask2_SSE2);
2740             dlij_SSE3          = _mm_and_ps(one_SSE,obc_mask2_SSE3);
2741
2742             uij2_SSE0          = _mm_mul_ps(uij_SSE0, uij_SSE0);
2743             uij2_SSE1          = _mm_mul_ps(uij_SSE1, uij_SSE1);
2744             uij2_SSE2          = _mm_mul_ps(uij_SSE2, uij_SSE2);
2745             uij2_SSE3          = _mm_mul_ps(uij_SSE3, uij_SSE3);
2746             uij3_SSE0          = _mm_mul_ps(uij2_SSE0,uij_SSE0);
2747             uij3_SSE1          = _mm_mul_ps(uij2_SSE1,uij_SSE1);
2748             uij3_SSE2          = _mm_mul_ps(uij2_SSE2,uij_SSE2);
2749             uij3_SSE3          = _mm_mul_ps(uij2_SSE3,uij_SSE3);
2750             lij2_SSE0          = _mm_mul_ps(lij_SSE0, lij_SSE0);
2751             lij2_SSE1          = _mm_mul_ps(lij_SSE1, lij_SSE1);
2752             lij2_SSE2          = _mm_mul_ps(lij_SSE2, lij_SSE2);
2753             lij2_SSE3          = _mm_mul_ps(lij_SSE3, lij_SSE3);
2754             lij3_SSE0          = _mm_mul_ps(lij2_SSE0,lij_SSE0);
2755             lij3_SSE1          = _mm_mul_ps(lij2_SSE1,lij_SSE1);
2756             lij3_SSE2          = _mm_mul_ps(lij2_SSE2,lij_SSE2);
2757             lij3_SSE3          = _mm_mul_ps(lij2_SSE3,lij_SSE3);
2758
2759             diff2_SSE0         = _mm_sub_ps(uij2_SSE0,lij2_SSE0);
2760             diff2_SSE1         = _mm_sub_ps(uij2_SSE1,lij2_SSE1);
2761             diff2_SSE2         = _mm_sub_ps(uij2_SSE2,lij2_SSE2);
2762             diff2_SSE3         = _mm_sub_ps(uij2_SSE3,lij2_SSE3);
2763             lij_inv_SSE0       = gmx_mm_invsqrt_ps(lij2_SSE0);
2764             lij_inv_SSE1       = gmx_mm_invsqrt_ps(lij2_SSE1);
2765             lij_inv_SSE2       = gmx_mm_invsqrt_ps(lij2_SSE2);
2766             lij_inv_SSE3       = gmx_mm_invsqrt_ps(lij2_SSE3);
2767             sk2_aj_SSE         = _mm_mul_ps(sk_aj_SSE,sk_aj_SSE);
2768             sk2_rinv_SSE0      = _mm_mul_ps(sk2_aj_SSE,rinv_SSE0);
2769             sk2_rinv_SSE1      = _mm_mul_ps(sk2_aj_SSE,rinv_SSE1);
2770             sk2_rinv_SSE2      = _mm_mul_ps(sk2_aj_SSE,rinv_SSE2);
2771             sk2_rinv_SSE3      = _mm_mul_ps(sk2_aj_SSE,rinv_SSE3);
2772             prod_SSE0          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE0);
2773             prod_SSE1          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE1);
2774             prod_SSE2          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE2);
2775             prod_SSE3          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE3);
2776
2777             logterm_SSE0       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE0,lij_inv_SSE0));
2778             logterm_SSE1       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE1,lij_inv_SSE1));
2779             logterm_SSE2       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE2,lij_inv_SSE2));
2780             logterm_SSE3       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE3,lij_inv_SSE3));
2781
2782             t1_SSE0            = _mm_sub_ps(lij_SSE0,uij_SSE0);
2783             t1_SSE1            = _mm_sub_ps(lij_SSE1,uij_SSE1);
2784             t1_SSE2            = _mm_sub_ps(lij_SSE2,uij_SSE2);
2785             t1_SSE3            = _mm_sub_ps(lij_SSE3,uij_SSE3);
2786             t2_SSE0            = _mm_mul_ps(diff2_SSE0,
2787                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE0),
2788                                                        prod_SSE0));
2789             t2_SSE1            = _mm_mul_ps(diff2_SSE1,
2790                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE1),
2791                                                        prod_SSE1));
2792             t2_SSE2            = _mm_mul_ps(diff2_SSE2,
2793                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE2),
2794                                                        prod_SSE2));
2795             t2_SSE3            = _mm_mul_ps(diff2_SSE3,
2796                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE3),
2797                                                        prod_SSE3));
2798
2799             t3_SSE0            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE0,logterm_SSE0));
2800             t3_SSE1            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE1,logterm_SSE1));
2801             t3_SSE2            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE2,logterm_SSE2));
2802             t3_SSE3            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE3,logterm_SSE3));
2803             t1_SSE0            = _mm_add_ps(t1_SSE0,_mm_add_ps(t2_SSE0,t3_SSE0));
2804             t1_SSE1            = _mm_add_ps(t1_SSE1,_mm_add_ps(t2_SSE1,t3_SSE1));
2805             t1_SSE2            = _mm_add_ps(t1_SSE2,_mm_add_ps(t2_SSE2,t3_SSE2));
2806             t1_SSE3            = _mm_add_ps(t1_SSE3,_mm_add_ps(t2_SSE3,t3_SSE3));
2807             t4_SSE0            = _mm_mul_ps(two_SSE,_mm_sub_ps(rai_inv_SSE0,lij_SSE0));
2808             t4_SSE1            = _mm_mul_ps(two_SSE,_mm_sub_ps(rai_inv_SSE1,lij_SSE1));
2809             t4_SSE2            = _mm_mul_ps(two_SSE,_mm_sub_ps(rai_inv_SSE2,lij_SSE2));
2810             t4_SSE3            = _mm_mul_ps(two_SSE,_mm_sub_ps(rai_inv_SSE3,lij_SSE3));
2811             t4_SSE0            = _mm_and_ps(t4_SSE0,obc_mask3_SSE0);
2812             t4_SSE1            = _mm_and_ps(t4_SSE1,obc_mask3_SSE1);
2813             t4_SSE2            = _mm_and_ps(t4_SSE2,obc_mask3_SSE2);
2814             t4_SSE3            = _mm_and_ps(t4_SSE3,obc_mask3_SSE3);
2815             t1_SSE0            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE0,t4_SSE0));
2816             t1_SSE1            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE1,t4_SSE1));
2817             t1_SSE2            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE2,t4_SSE2));
2818             t1_SSE3            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE3,t4_SSE3));
2819
2820             sum_ai_SSE0        = _mm_add_ps(sum_ai_SSE0,_mm_and_ps(t1_SSE0,obc_mask1_SSE0));
2821             sum_ai_SSE1        = _mm_add_ps(sum_ai_SSE1,_mm_and_ps(t1_SSE1,obc_mask1_SSE1));
2822             sum_ai_SSE2        = _mm_add_ps(sum_ai_SSE2,_mm_and_ps(t1_SSE2,obc_mask1_SSE2));
2823             sum_ai_SSE3        = _mm_add_ps(sum_ai_SSE3,_mm_and_ps(t1_SSE3,obc_mask1_SSE3));
2824
2825             t1_SSE0            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE0),
2826                                             _mm_mul_ps(prod_SSE0,lij3_SSE0));
2827             t1_SSE1            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE1),
2828                                             _mm_mul_ps(prod_SSE1,lij3_SSE1));
2829             t1_SSE2            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE2),
2830                                             _mm_mul_ps(prod_SSE2,lij3_SSE2));
2831             t1_SSE3            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE3),
2832                                             _mm_mul_ps(prod_SSE3,lij3_SSE3));
2833             t1_SSE0            = _mm_sub_ps(t1_SSE0,
2834                                             _mm_mul_ps(onefourth_SSE,
2835                                                        _mm_add_ps(_mm_mul_ps(lij_SSE0,rinv_SSE0),
2836                                                                   _mm_mul_ps(lij3_SSE0,dr_SSE0))));
2837             t1_SSE1            = _mm_sub_ps(t1_SSE1,
2838                                             _mm_mul_ps(onefourth_SSE,
2839                                                        _mm_add_ps(_mm_mul_ps(lij_SSE1,rinv_SSE1),
2840                                                                   _mm_mul_ps(lij3_SSE1,dr_SSE1))));
2841             t1_SSE2            = _mm_sub_ps(t1_SSE2,
2842                                             _mm_mul_ps(onefourth_SSE,
2843                                                        _mm_add_ps(_mm_mul_ps(lij_SSE2,rinv_SSE2),
2844                                                                   _mm_mul_ps(lij3_SSE2,dr_SSE2))));
2845             t1_SSE3            = _mm_sub_ps(t1_SSE3,
2846                                             _mm_mul_ps(onefourth_SSE,
2847                                                        _mm_add_ps(_mm_mul_ps(lij_SSE3,rinv_SSE3),
2848                                                                   _mm_mul_ps(lij3_SSE3,dr_SSE3))));
2849
2850             t2_SSE0            = _mm_mul_ps(onefourth_SSE,
2851                                             _mm_add_ps(_mm_mul_ps(uij_SSE0,rinv_SSE0),
2852                                                        _mm_mul_ps(uij3_SSE0,dr_SSE0)));
2853             t2_SSE1            = _mm_mul_ps(onefourth_SSE,
2854                                             _mm_add_ps(_mm_mul_ps(uij_SSE1,rinv_SSE1),
2855                                                        _mm_mul_ps(uij3_SSE1,dr_SSE1)));
2856             t2_SSE2            = _mm_mul_ps(onefourth_SSE,
2857                                             _mm_add_ps(_mm_mul_ps(uij_SSE2,rinv_SSE2),
2858                                                        _mm_mul_ps(uij3_SSE2,dr_SSE2)));
2859             t2_SSE3            = _mm_mul_ps(onefourth_SSE,
2860                                             _mm_add_ps(_mm_mul_ps(uij_SSE3,rinv_SSE3),
2861                                                        _mm_mul_ps(uij3_SSE3,dr_SSE3)));
2862             t2_SSE0            = _mm_sub_ps(t2_SSE0,
2863                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE0),
2864                                                        _mm_mul_ps(prod_SSE0,uij3_SSE0)));
2865             t2_SSE1            = _mm_sub_ps(t2_SSE1,
2866                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE1),
2867                                                        _mm_mul_ps(prod_SSE1,uij3_SSE1)));
2868             t2_SSE2            = _mm_sub_ps(t2_SSE2,
2869                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE2),
2870                                                        _mm_mul_ps(prod_SSE2,uij3_SSE2)));
2871             t2_SSE3            = _mm_sub_ps(t2_SSE3,
2872                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE3),
2873                                                        _mm_mul_ps(prod_SSE3,uij3_SSE3)));
2874             t3_SSE0            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE0),
2875                                             _mm_mul_ps(rinv_SSE0,rinv_SSE0));
2876             t3_SSE1            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE1),
2877                                             _mm_mul_ps(rinv_SSE1,rinv_SSE1));
2878             t3_SSE2            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE2),
2879                                             _mm_mul_ps(rinv_SSE2,rinv_SSE2));
2880             t3_SSE3            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE3),
2881                                             _mm_mul_ps(rinv_SSE3,rinv_SSE3));
2882             t3_SSE0            = _mm_sub_ps(t3_SSE0,
2883                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE0,oneeighth_SSE),
2884                                                        _mm_add_ps(one_SSE,
2885                                                                   _mm_mul_ps(sk2_rinv_SSE0,rinv_SSE0))));
2886             t3_SSE1            = _mm_sub_ps(t3_SSE1,
2887                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE1,oneeighth_SSE),
2888                                                        _mm_add_ps(one_SSE,
2889                                                                   _mm_mul_ps(sk2_rinv_SSE1,rinv_SSE1))));
2890             t3_SSE2            = _mm_sub_ps(t3_SSE2,
2891                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE2,oneeighth_SSE),
2892                                                        _mm_add_ps(one_SSE,
2893                                                                   _mm_mul_ps(sk2_rinv_SSE2,rinv_SSE2))));
2894             t3_SSE3            = _mm_sub_ps(t3_SSE3,
2895                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE3,oneeighth_SSE),
2896                                                        _mm_add_ps(one_SSE,
2897                                                                   _mm_mul_ps(sk2_rinv_SSE3,rinv_SSE3))));
2898
2899             t1_SSE0            = _mm_mul_ps(rinv_SSE0,
2900                                             _mm_add_ps(_mm_mul_ps(dlij_SSE0,t1_SSE0),
2901                                                        _mm_add_ps(t2_SSE0,t3_SSE0)));
2902             t1_SSE1            = _mm_mul_ps(rinv_SSE1,
2903                                             _mm_add_ps(_mm_mul_ps(dlij_SSE1,t1_SSE1),
2904                                                        _mm_add_ps(t2_SSE1,t3_SSE1)));
2905             t1_SSE2            = _mm_mul_ps(rinv_SSE2,
2906                                             _mm_add_ps(_mm_mul_ps(dlij_SSE2,t1_SSE2),
2907                                                        _mm_add_ps(t2_SSE2,t3_SSE2)));
2908             t1_SSE3            = _mm_mul_ps(rinv_SSE3,
2909                                             _mm_add_ps(_mm_mul_ps(dlij_SSE3,t1_SSE3),
2910                                                        _mm_add_ps(t2_SSE3,t3_SSE3)));
2911
2912             _mm_store_ps(dadx,_mm_and_ps(t1_SSE0,obc_mask1_SSE0));
2913             dadx += 4;
2914             _mm_store_ps(dadx,_mm_and_ps(t1_SSE1,obc_mask1_SSE1));
2915             dadx += 4;
2916             _mm_store_ps(dadx,_mm_and_ps(t1_SSE2,obc_mask1_SSE2));
2917             dadx += 4;
2918             _mm_store_ps(dadx,_mm_and_ps(t1_SSE3,obc_mask1_SSE3));
2919             dadx += 4;
2920
2921             /* Evaluate influence of atom ai -> aj */
2922             t1_SSE0            = _mm_add_ps(dr_SSE0,sk_ai_SSE0);
2923             t1_SSE1            = _mm_add_ps(dr_SSE1,sk_ai_SSE1);
2924             t1_SSE2            = _mm_add_ps(dr_SSE2,sk_ai_SSE2);
2925             t1_SSE3            = _mm_add_ps(dr_SSE3,sk_ai_SSE3);
2926             t2_SSE0            = _mm_sub_ps(dr_SSE0,sk_ai_SSE0);
2927             t2_SSE1            = _mm_sub_ps(dr_SSE1,sk_ai_SSE1);
2928             t2_SSE2            = _mm_sub_ps(dr_SSE2,sk_ai_SSE2);
2929             t2_SSE3            = _mm_sub_ps(dr_SSE3,sk_ai_SSE3);
2930             t3_SSE0            = _mm_sub_ps(sk_ai_SSE0,dr_SSE0);
2931             t3_SSE1            = _mm_sub_ps(sk_ai_SSE1,dr_SSE1);
2932             t3_SSE2            = _mm_sub_ps(sk_ai_SSE2,dr_SSE2);
2933             t3_SSE3            = _mm_sub_ps(sk_ai_SSE3,dr_SSE3);
2934
2935             obc_mask1_SSE0     = _mm_cmplt_ps(raj_SSE, t1_SSE0);
2936             obc_mask1_SSE1     = _mm_cmplt_ps(raj_SSE, t1_SSE1);
2937             obc_mask1_SSE2     = _mm_cmplt_ps(raj_SSE, t1_SSE2);
2938             obc_mask1_SSE3     = _mm_cmplt_ps(raj_SSE, t1_SSE3);
2939             obc_mask2_SSE0     = _mm_cmplt_ps(raj_SSE, t2_SSE0);
2940             obc_mask2_SSE1     = _mm_cmplt_ps(raj_SSE, t2_SSE1);
2941             obc_mask2_SSE2     = _mm_cmplt_ps(raj_SSE, t2_SSE2);
2942             obc_mask2_SSE3     = _mm_cmplt_ps(raj_SSE, t2_SSE3);
2943             obc_mask3_SSE0     = _mm_cmplt_ps(raj_SSE, t3_SSE0);
2944             obc_mask3_SSE1     = _mm_cmplt_ps(raj_SSE, t3_SSE1);
2945             obc_mask3_SSE2     = _mm_cmplt_ps(raj_SSE, t3_SSE2);
2946             obc_mask3_SSE3     = _mm_cmplt_ps(raj_SSE, t3_SSE3);
2947             obc_mask1_SSE0     = _mm_and_ps(obc_mask1_SSE0,jmask_SSE0);
2948             obc_mask1_SSE1     = _mm_and_ps(obc_mask1_SSE1,jmask_SSE1);
2949             obc_mask1_SSE2     = _mm_and_ps(obc_mask1_SSE2,jmask_SSE2);
2950             obc_mask1_SSE3     = _mm_and_ps(obc_mask1_SSE3,jmask_SSE3);
2951
2952             uij_SSE0           = gmx_mm_inv_ps(t1_SSE0);
2953             uij_SSE1           = gmx_mm_inv_ps(t1_SSE1);
2954             uij_SSE2           = gmx_mm_inv_ps(t1_SSE2);
2955             uij_SSE3           = gmx_mm_inv_ps(t1_SSE3);
2956             lij_SSE0           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE0,gmx_mm_inv_ps(t2_SSE0)),
2957                                            _mm_andnot_ps(obc_mask2_SSE0,raj_inv_SSE));
2958             lij_SSE1           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE1,gmx_mm_inv_ps(t2_SSE1)),
2959                                            _mm_andnot_ps(obc_mask2_SSE1,raj_inv_SSE));
2960             lij_SSE2           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE2,gmx_mm_inv_ps(t2_SSE2)),
2961                                            _mm_andnot_ps(obc_mask2_SSE2,raj_inv_SSE));
2962             lij_SSE3           = _mm_or_ps(   _mm_and_ps(obc_mask2_SSE3,gmx_mm_inv_ps(t2_SSE3)),
2963                                            _mm_andnot_ps(obc_mask2_SSE3,raj_inv_SSE));
2964             dlij_SSE0          = _mm_and_ps(one_SSE,obc_mask2_SSE0);
2965             dlij_SSE1          = _mm_and_ps(one_SSE,obc_mask2_SSE1);
2966             dlij_SSE2          = _mm_and_ps(one_SSE,obc_mask2_SSE2);
2967             dlij_SSE3          = _mm_and_ps(one_SSE,obc_mask2_SSE3);
2968
2969             uij2_SSE0          = _mm_mul_ps(uij_SSE0, uij_SSE0);
2970             uij2_SSE1          = _mm_mul_ps(uij_SSE1, uij_SSE1);
2971             uij2_SSE2          = _mm_mul_ps(uij_SSE2, uij_SSE2);
2972             uij2_SSE3          = _mm_mul_ps(uij_SSE3, uij_SSE3);
2973             uij3_SSE0          = _mm_mul_ps(uij2_SSE0,uij_SSE0);
2974             uij3_SSE1          = _mm_mul_ps(uij2_SSE1,uij_SSE1);
2975             uij3_SSE2          = _mm_mul_ps(uij2_SSE2,uij_SSE2);
2976             uij3_SSE3          = _mm_mul_ps(uij2_SSE3,uij_SSE3);
2977             lij2_SSE0          = _mm_mul_ps(lij_SSE0, lij_SSE0);
2978             lij2_SSE1          = _mm_mul_ps(lij_SSE1, lij_SSE1);
2979             lij2_SSE2          = _mm_mul_ps(lij_SSE2, lij_SSE2);
2980             lij2_SSE3          = _mm_mul_ps(lij_SSE3, lij_SSE3);
2981             lij3_SSE0          = _mm_mul_ps(lij2_SSE0,lij_SSE0);
2982             lij3_SSE1          = _mm_mul_ps(lij2_SSE1,lij_SSE1);
2983             lij3_SSE2          = _mm_mul_ps(lij2_SSE2,lij_SSE2);
2984             lij3_SSE3          = _mm_mul_ps(lij2_SSE3,lij_SSE3);
2985
2986             diff2_SSE0         = _mm_sub_ps(uij2_SSE0,lij2_SSE0);
2987             diff2_SSE1         = _mm_sub_ps(uij2_SSE1,lij2_SSE1);
2988             diff2_SSE2         = _mm_sub_ps(uij2_SSE2,lij2_SSE2);
2989             diff2_SSE3         = _mm_sub_ps(uij2_SSE3,lij2_SSE3);
2990             lij_inv_SSE0       = gmx_mm_invsqrt_ps(lij2_SSE0);
2991             lij_inv_SSE1       = gmx_mm_invsqrt_ps(lij2_SSE1);
2992             lij_inv_SSE2       = gmx_mm_invsqrt_ps(lij2_SSE2);
2993             lij_inv_SSE3       = gmx_mm_invsqrt_ps(lij2_SSE3);
2994             sk2_rinv_SSE0      = _mm_mul_ps(sk2_ai_SSE0,rinv_SSE0);
2995             sk2_rinv_SSE1      = _mm_mul_ps(sk2_ai_SSE1,rinv_SSE1);
2996             sk2_rinv_SSE2      = _mm_mul_ps(sk2_ai_SSE2,rinv_SSE2);
2997             sk2_rinv_SSE3      = _mm_mul_ps(sk2_ai_SSE3,rinv_SSE3);
2998             prod_SSE0          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE0);
2999             prod_SSE1          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE1);
3000             prod_SSE2          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE2);
3001             prod_SSE3          = _mm_mul_ps(onefourth_SSE,sk2_rinv_SSE3);
3002
3003             logterm_SSE0       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE0,lij_inv_SSE0));
3004             logterm_SSE1       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE1,lij_inv_SSE1));
3005             logterm_SSE2       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE2,lij_inv_SSE2));
3006             logterm_SSE3       = gmx_mm_log_ps(_mm_mul_ps(uij_SSE3,lij_inv_SSE3));
3007             t1_SSE0            = _mm_sub_ps(lij_SSE0,uij_SSE0);
3008             t1_SSE1            = _mm_sub_ps(lij_SSE1,uij_SSE1);
3009             t1_SSE2            = _mm_sub_ps(lij_SSE2,uij_SSE2);
3010             t1_SSE3            = _mm_sub_ps(lij_SSE3,uij_SSE3);
3011             t2_SSE0            = _mm_mul_ps(diff2_SSE0,
3012                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE0),
3013                                                        prod_SSE0));
3014             t2_SSE1            = _mm_mul_ps(diff2_SSE1,
3015                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE1),
3016                                                        prod_SSE1));
3017             t2_SSE2            = _mm_mul_ps(diff2_SSE2,
3018                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE2),
3019                                                        prod_SSE2));
3020             t2_SSE3            = _mm_mul_ps(diff2_SSE3,
3021                                             _mm_sub_ps(_mm_mul_ps(onefourth_SSE,dr_SSE3),
3022                                                        prod_SSE3));
3023             t3_SSE0            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE0,logterm_SSE0));
3024             t3_SSE1            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE1,logterm_SSE1));
3025             t3_SSE2            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE2,logterm_SSE2));
3026             t3_SSE3            = _mm_mul_ps(half_SSE,_mm_mul_ps(rinv_SSE3,logterm_SSE3));
3027             t1_SSE0            = _mm_add_ps(t1_SSE0,_mm_add_ps(t2_SSE0,t3_SSE0));
3028             t1_SSE1            = _mm_add_ps(t1_SSE1,_mm_add_ps(t2_SSE1,t3_SSE1));
3029             t1_SSE2            = _mm_add_ps(t1_SSE2,_mm_add_ps(t2_SSE2,t3_SSE2));
3030             t1_SSE3            = _mm_add_ps(t1_SSE3,_mm_add_ps(t2_SSE3,t3_SSE3));
3031             t4_SSE0            = _mm_mul_ps(two_SSE,_mm_sub_ps(raj_inv_SSE,lij_SSE0));
3032             t4_SSE1            = _mm_mul_ps(two_SSE,_mm_sub_ps(raj_inv_SSE,lij_SSE1));
3033             t4_SSE2            = _mm_mul_ps(two_SSE,_mm_sub_ps(raj_inv_SSE,lij_SSE2));
3034             t4_SSE3            = _mm_mul_ps(two_SSE,_mm_sub_ps(raj_inv_SSE,lij_SSE3));
3035             t4_SSE0            = _mm_and_ps(t4_SSE0,obc_mask3_SSE0);
3036             t4_SSE1            = _mm_and_ps(t4_SSE1,obc_mask3_SSE1);
3037             t4_SSE2            = _mm_and_ps(t4_SSE2,obc_mask3_SSE2);
3038             t4_SSE3            = _mm_and_ps(t4_SSE3,obc_mask3_SSE3);
3039             t1_SSE0            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE0,t4_SSE0));
3040             t1_SSE1            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE1,t4_SSE1));
3041             t1_SSE2            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE2,t4_SSE2));
3042             t1_SSE3            = _mm_mul_ps(half_SSE,_mm_add_ps(t1_SSE3,t4_SSE3));
3043
3044             _mm_store_ps(work+j, _mm_add_ps(_mm_load_ps(work+j),
3045                                             gmx_mm_sum4_ps(_mm_and_ps(t1_SSE0,obc_mask1_SSE0),
3046                                                         _mm_and_ps(t1_SSE1,obc_mask1_SSE1),
3047                                                         _mm_and_ps(t1_SSE2,obc_mask1_SSE2),
3048                                                         _mm_and_ps(t1_SSE3,obc_mask1_SSE3))));
3049
3050             t1_SSE0            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE0),
3051                                             _mm_mul_ps(prod_SSE0,lij3_SSE0));
3052             t1_SSE1            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE1),
3053                                             _mm_mul_ps(prod_SSE1,lij3_SSE1));
3054             t1_SSE2            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE2),
3055                                             _mm_mul_ps(prod_SSE2,lij3_SSE2));
3056             t1_SSE3            = _mm_add_ps(_mm_mul_ps(half_SSE,lij2_SSE3),
3057                                             _mm_mul_ps(prod_SSE3,lij3_SSE3));
3058             t1_SSE0            = _mm_sub_ps(t1_SSE0,
3059                                             _mm_mul_ps(onefourth_SSE,
3060                                                        _mm_add_ps(_mm_mul_ps(lij_SSE0,rinv_SSE0),
3061                                                                   _mm_mul_ps(lij3_SSE0,dr_SSE0))));
3062             t1_SSE1            = _mm_sub_ps(t1_SSE1,
3063                                             _mm_mul_ps(onefourth_SSE,
3064                                                        _mm_add_ps(_mm_mul_ps(lij_SSE1,rinv_SSE1),
3065                                                                   _mm_mul_ps(lij3_SSE1,dr_SSE1))));
3066             t1_SSE2            = _mm_sub_ps(t1_SSE2,
3067                                             _mm_mul_ps(onefourth_SSE,
3068                                                        _mm_add_ps(_mm_mul_ps(lij_SSE2,rinv_SSE2),
3069                                                                   _mm_mul_ps(lij3_SSE2,dr_SSE2))));
3070             t1_SSE3            = _mm_sub_ps(t1_SSE3,
3071                                             _mm_mul_ps(onefourth_SSE,
3072                                                        _mm_add_ps(_mm_mul_ps(lij_SSE3,rinv_SSE3),
3073                                                                   _mm_mul_ps(lij3_SSE3,dr_SSE3))));
3074             t2_SSE0            = _mm_mul_ps(onefourth_SSE,
3075                                             _mm_add_ps(_mm_mul_ps(uij_SSE0,rinv_SSE0),
3076                                                        _mm_mul_ps(uij3_SSE0,dr_SSE0)));
3077             t2_SSE1            = _mm_mul_ps(onefourth_SSE,
3078                                             _mm_add_ps(_mm_mul_ps(uij_SSE1,rinv_SSE1),
3079                                                        _mm_mul_ps(uij3_SSE1,dr_SSE1)));
3080             t2_SSE2            = _mm_mul_ps(onefourth_SSE,
3081                                             _mm_add_ps(_mm_mul_ps(uij_SSE2,rinv_SSE2),
3082                                                        _mm_mul_ps(uij3_SSE2,dr_SSE2)));
3083             t2_SSE3            = _mm_mul_ps(onefourth_SSE,
3084                                             _mm_add_ps(_mm_mul_ps(uij_SSE3,rinv_SSE3),
3085                                                        _mm_mul_ps(uij3_SSE3,dr_SSE3)));
3086             t2_SSE0            = _mm_sub_ps(t2_SSE0,
3087                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE0),
3088                                                        _mm_mul_ps(prod_SSE0,uij3_SSE0)));
3089             t2_SSE1            = _mm_sub_ps(t2_SSE1,
3090                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE1),
3091                                                        _mm_mul_ps(prod_SSE1,uij3_SSE1)));
3092             t2_SSE2            = _mm_sub_ps(t2_SSE2,
3093                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE2),
3094                                                        _mm_mul_ps(prod_SSE2,uij3_SSE2)));
3095             t2_SSE3            = _mm_sub_ps(t2_SSE3,
3096                                             _mm_add_ps(_mm_mul_ps(half_SSE,uij2_SSE3),
3097                                                        _mm_mul_ps(prod_SSE3,uij3_SSE3)));
3098
3099             t3_SSE0            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE0),
3100                                             _mm_mul_ps(rinv_SSE0,rinv_SSE0));
3101             t3_SSE1            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE1),
3102                                             _mm_mul_ps(rinv_SSE1,rinv_SSE1));
3103             t3_SSE2            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE2),
3104                                             _mm_mul_ps(rinv_SSE2,rinv_SSE2));
3105             t3_SSE3            = _mm_mul_ps(_mm_mul_ps(onefourth_SSE,logterm_SSE3),
3106                                             _mm_mul_ps(rinv_SSE3,rinv_SSE3));
3107
3108             t3_SSE0            = _mm_sub_ps(t3_SSE0,
3109                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE0,oneeighth_SSE),
3110                                                        _mm_add_ps(one_SSE,
3111                                                                   _mm_mul_ps(sk2_rinv_SSE0,rinv_SSE0))));
3112             t3_SSE1            = _mm_sub_ps(t3_SSE1,
3113                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE1,oneeighth_SSE),
3114                                                        _mm_add_ps(one_SSE,
3115                                                                   _mm_mul_ps(sk2_rinv_SSE1,rinv_SSE1))));
3116             t3_SSE2            = _mm_sub_ps(t3_SSE2,
3117                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE2,oneeighth_SSE),
3118                                                        _mm_add_ps(one_SSE,
3119                                                                   _mm_mul_ps(sk2_rinv_SSE2,rinv_SSE2))));
3120             t3_SSE3            = _mm_sub_ps(t3_SSE3,
3121                                             _mm_mul_ps(_mm_mul_ps(diff2_SSE3,oneeighth_SSE),
3122                                                        _mm_add_ps(one_SSE,
3123                                                                   _mm_mul_ps(sk2_rinv_SSE3,rinv_SSE3))));
3124
3125
3126             t1_SSE0            = _mm_mul_ps(rinv_SSE0,
3127                                             _mm_add_ps(_mm_mul_ps(dlij_SSE0,t1_SSE0),
3128                                                        _mm_add_ps(t2_SSE0,t3_SSE0)));
3129             t1_SSE1            = _mm_mul_ps(rinv_SSE1,
3130                                             _mm_add_ps(_mm_mul_ps(dlij_SSE1,t1_SSE1),
3131                                                        _mm_add_ps(t2_SSE1,t3_SSE1)));
3132             t1_SSE2            = _mm_mul_ps(rinv_SSE2,
3133                                             _mm_add_ps(_mm_mul_ps(dlij_SSE2,t1_SSE2),
3134                                                        _mm_add_ps(t2_SSE2,t3_SSE2)));
3135             t1_SSE3            = _mm_mul_ps(rinv_SSE3,
3136                                             _mm_add_ps(_mm_mul_ps(dlij_SSE3,t1_SSE3),
3137                                                        _mm_add_ps(t2_SSE3,t3_SSE3)));
3138
3139             _mm_store_ps(dadx,_mm_and_ps(t1_SSE0,obc_mask1_SSE0));
3140             dadx += 4;
3141             _mm_store_ps(dadx,_mm_and_ps(t1_SSE1,obc_mask1_SSE1));
3142             dadx += 4;
3143             _mm_store_ps(dadx,_mm_and_ps(t1_SSE2,obc_mask1_SSE2));
3144             dadx += 4;
3145             _mm_store_ps(dadx,_mm_and_ps(t1_SSE3,obc_mask1_SSE3));
3146             dadx += 4;
3147         }
3148         _MM_TRANSPOSE4_PS(sum_ai_SSE0,sum_ai_SSE1,sum_ai_SSE2,sum_ai_SSE3);
3149         sum_ai_SSE0 = _mm_add_ps(sum_ai_SSE0,sum_ai_SSE1);
3150         sum_ai_SSE2 = _mm_add_ps(sum_ai_SSE2,sum_ai_SSE3);
3151         sum_ai_SSE0 = _mm_add_ps(sum_ai_SSE0,sum_ai_SSE2);
3152         _mm_store_ps(work+i, _mm_add_ps(sum_ai_SSE0, _mm_load_ps(work+i)));
3153         }
3154
3155
3156     for(i=0;i<natoms/2+1;i++)
3157     {
3158         work[i] += work[natoms+i];
3159     }
3160
3161     /* Parallel summations */
3162
3163         if(PARTDECOMP(cr))
3164         {
3165                 gmx_sum(natoms,work, cr);
3166         }
3167
3168     if(gb_algorithm==egbHCT)
3169     {
3170         /* HCT */
3171         for(i=0;i<natoms;i++)
3172         {
3173             if(born->use[i] != 0)
3174             {
3175                 rai     = top->atomtypes.gb_radius[mdatoms->typeA[i]]-born->gb_doffset;
3176                 sum_ai  = 1.0/rai - work[i];
3177                 min_rad = rai + born->gb_doffset;
3178                 rad     = 1.0/sum_ai;
3179
3180                 born->bRad[i]   = rad > min_rad ? rad : min_rad;
3181                 fr->invsqrta[i] = gmx_invsqrt(born->bRad[i]);
3182             }
3183         }
3184
3185     }
3186     else
3187     {
3188         /* OBC */
3189
3190         /* Calculate the radii */
3191         for(i=0;i<natoms;i++)
3192         {
3193
3194             if(born->use[i] != 0)
3195             {
3196                 rai        = top->atomtypes.gb_radius[mdatoms->typeA[i]];
3197                 rai_inv2   = 1.0/rai;
3198                 rai        = rai-born->gb_doffset;
3199                 rai_inv    = 1.0/rai;
3200                 sum_ai     = rai * work[i];
3201                 sum_ai2    = sum_ai  * sum_ai;
3202                 sum_ai3    = sum_ai2 * sum_ai;
3203
3204                 tsum    = tanh(born->obc_alpha*sum_ai-born->obc_beta*sum_ai2+born->obc_gamma*sum_ai3);
3205                 born->bRad[i] = rai_inv - tsum*rai_inv2;
3206                 born->bRad[i] = 1.0 / born->bRad[i];
3207
3208                 fr->invsqrta[i]=gmx_invsqrt(born->bRad[i]);
3209
3210                 tchain  = rai * (born->obc_alpha-2*born->obc_beta*sum_ai+3*born->obc_gamma*sum_ai2);
3211                 born->drobc[i] = (1.0-tsum*tsum)*tchain*rai_inv2;
3212             }
3213         }
3214     }
3215
3216         return 0;
3217 }
3218
3219
3220
3221
3222
3223
3224
3225
3226 int
3227 genborn_allvsall_calc_chainrule_sse2_single(t_forcerec *           fr,
3228                                             t_mdatoms *            mdatoms,
3229                                             gmx_genborn_t *        born,
3230                                             real *                 x,
3231                                             real *                 f,
3232                                             int                    gb_algorithm,
3233                                             void *                 paadata)
3234 {
3235         gmx_allvsallgb2_data_t *aadata;
3236         int        natoms;
3237         int        ni0,ni1;
3238         int        nj0,nj1,nj2,nj3;
3239         int        i,j,k,n;
3240     int        idx;
3241     int *      mask;
3242     int *      pmask0;
3243     int *      emask0;
3244     int *      jindex;
3245
3246     real       ix,iy,iz;
3247     real       fix,fiy,fiz;
3248     real       jx,jy,jz;
3249     real       dx,dy,dz;
3250     real       tx,ty,tz;
3251     real       rbai,rbaj,fgb,fgb_ai,rbi;
3252     real *     rb;
3253     real *     dadx;
3254     real *     x_align;
3255     real *     y_align;
3256     real *     z_align;
3257     real *     fx_align;
3258     real *     fy_align;
3259     real *     fz_align;
3260     real       tmpsum[4];
3261
3262     __m128     jmask_SSE0,jmask_SSE1,jmask_SSE2,jmask_SSE3;
3263     __m128     ix_SSE0,iy_SSE0,iz_SSE0;
3264     __m128     ix_SSE1,iy_SSE1,iz_SSE1;
3265     __m128     ix_SSE2,iy_SSE2,iz_SSE2;
3266     __m128     ix_SSE3,iy_SSE3,iz_SSE3;
3267     __m128     fix_SSE0,fiy_SSE0,fiz_SSE0;
3268     __m128     fix_SSE1,fiy_SSE1,fiz_SSE1;
3269     __m128     fix_SSE2,fiy_SSE2,fiz_SSE2;
3270     __m128     fix_SSE3,fiy_SSE3,fiz_SSE3;
3271     __m128     rbai_SSE0,rbai_SSE1,rbai_SSE2,rbai_SSE3;
3272     __m128     imask_SSE0,imask_SSE1,imask_SSE2,imask_SSE3;
3273     __m128     jx_SSE,jy_SSE,jz_SSE,rbaj_SSE;
3274     __m128     dx_SSE0,dy_SSE0,dz_SSE0;
3275     __m128     dx_SSE1,dy_SSE1,dz_SSE1;
3276     __m128     dx_SSE2,dy_SSE2,dz_SSE2;
3277     __m128     dx_SSE3,dy_SSE3,dz_SSE3;
3278     __m128     fgb_SSE0,fgb_ai_SSE0;
3279     __m128     fgb_SSE1,fgb_ai_SSE1;
3280     __m128     fgb_SSE2,fgb_ai_SSE2;
3281     __m128     fgb_SSE3,fgb_ai_SSE3;
3282     __m128     tx_SSE0,ty_SSE0,tz_SSE0;
3283     __m128     tx_SSE1,ty_SSE1,tz_SSE1;
3284     __m128     tx_SSE2,ty_SSE2,tz_SSE2;
3285     __m128     tx_SSE3,ty_SSE3,tz_SSE3;
3286     __m128     t1,t2;
3287
3288     natoms              = mdatoms->nr;
3289         ni0                 = (mdatoms->start/SIMD_WIDTH)*SIMD_WIDTH;
3290         ni1                 = mdatoms->start+mdatoms->homenr;
3291     dadx                = fr->dadx;
3292
3293     aadata = (gmx_allvsallgb2_data_t *)paadata;
3294
3295     x_align = aadata->x_align;
3296         y_align = aadata->y_align;
3297         z_align = aadata->z_align;
3298     fx_align = aadata->fx_align;
3299         fy_align = aadata->fy_align;
3300         fz_align = aadata->fz_align;
3301
3302     jindex    = aadata->jindex_gb;
3303     dadx      = fr->dadx;
3304
3305     n = 0;
3306     rb = aadata->work;
3307
3308         /* Loop to get the proper form for the Born radius term */
3309         if(gb_algorithm==egbSTILL)
3310         {
3311                 for(i=0;i<natoms;i++)
3312                 {
3313                         rbi   = born->bRad[i];
3314                         rb[i] = (2 * rbi * rbi * fr->dvda[i])/ONE_4PI_EPS0;
3315                 }
3316         }
3317         else if(gb_algorithm==egbHCT)
3318         {
3319                 for(i=0;i<natoms;i++)
3320                 {
3321                         rbi   = born->bRad[i];
3322                         rb[i] = rbi * rbi * fr->dvda[i];
3323                 }
3324         }
3325         else if(gb_algorithm==egbOBC)
3326         {
3327                 for(idx=0;idx<natoms;idx++)
3328                 {
3329                         rbi   = born->bRad[idx];
3330                         rb[idx] = rbi * rbi * born->drobc[idx] * fr->dvda[idx];
3331                 }
3332         }
3333
3334     for(i=0;i<2*natoms;i++)
3335         {
3336                 fx_align[i]       = 0;
3337                 fy_align[i]       = 0;
3338                 fz_align[i]       = 0;
3339     }
3340
3341
3342     for(i=0;i<natoms;i++)
3343     {
3344         rb[i+natoms]=rb[i];
3345     }
3346
3347     for(i=ni0; i<ni1; i+=UNROLLI)
3348         {
3349                 /* We assume shifts are NOT used for all-vs-all interactions */
3350
3351                 /* Load i atom data */
3352                 ix_SSE0          = _mm_load1_ps(x_align+i);
3353                 iy_SSE0          = _mm_load1_ps(y_align+i);
3354                 iz_SSE0          = _mm_load1_ps(z_align+i);
3355                 ix_SSE1          = _mm_load1_ps(x_align+i+1);
3356                 iy_SSE1          = _mm_load1_ps(y_align+i+1);
3357                 iz_SSE1          = _mm_load1_ps(z_align+i+1);
3358                 ix_SSE2          = _mm_load1_ps(x_align+i+2);
3359                 iy_SSE2          = _mm_load1_ps(y_align+i+2);
3360                 iz_SSE2          = _mm_load1_ps(z_align+i+2);
3361                 ix_SSE3          = _mm_load1_ps(x_align+i+3);
3362                 iy_SSE3          = _mm_load1_ps(y_align+i+3);
3363                 iz_SSE3          = _mm_load1_ps(z_align+i+3);
3364
3365                 fix_SSE0         = _mm_setzero_ps();
3366                 fiy_SSE0         = _mm_setzero_ps();
3367                 fiz_SSE0         = _mm_setzero_ps();
3368                 fix_SSE1         = _mm_setzero_ps();
3369                 fiy_SSE1         = _mm_setzero_ps();
3370                 fiz_SSE1         = _mm_setzero_ps();
3371                 fix_SSE2         = _mm_setzero_ps();
3372                 fiy_SSE2         = _mm_setzero_ps();
3373                 fiz_SSE2         = _mm_setzero_ps();
3374                 fix_SSE3         = _mm_setzero_ps();
3375                 fiy_SSE3         = _mm_setzero_ps();
3376                 fiz_SSE3         = _mm_setzero_ps();
3377
3378         rbai_SSE0        = _mm_load1_ps(rb+i);
3379         rbai_SSE1        = _mm_load1_ps(rb+i+1);
3380         rbai_SSE2        = _mm_load1_ps(rb+i+2);
3381         rbai_SSE3        = _mm_load1_ps(rb+i+3);
3382
3383                 /* Load limits for loop over neighbors */
3384                 nj0              = jindex[4*i];
3385                 nj3              = jindex[4*i+3];
3386
3387         /* No masks necessary, since the stored chain rule derivatives will be zero in those cases! */
3388         for(j=nj0; j<nj3; j+=UNROLLJ)
3389         {
3390             /* load j atom coordinates */
3391             jx_SSE           = _mm_load_ps(x_align+j);
3392             jy_SSE           = _mm_load_ps(y_align+j);
3393             jz_SSE           = _mm_load_ps(z_align+j);
3394
3395             /* Calculate distance */
3396             dx_SSE0          = _mm_sub_ps(ix_SSE0,jx_SSE);
3397             dy_SSE0          = _mm_sub_ps(iy_SSE0,jy_SSE);
3398             dz_SSE0          = _mm_sub_ps(iz_SSE0,jz_SSE);
3399             dx_SSE1          = _mm_sub_ps(ix_SSE1,jx_SSE);
3400             dy_SSE1          = _mm_sub_ps(iy_SSE1,jy_SSE);
3401             dz_SSE1          = _mm_sub_ps(iz_SSE1,jz_SSE);
3402             dx_SSE2          = _mm_sub_ps(ix_SSE2,jx_SSE);
3403             dy_SSE2          = _mm_sub_ps(iy_SSE2,jy_SSE);
3404             dz_SSE2          = _mm_sub_ps(iz_SSE2,jz_SSE);
3405             dx_SSE3          = _mm_sub_ps(ix_SSE3,jx_SSE);
3406             dy_SSE3          = _mm_sub_ps(iy_SSE3,jy_SSE);
3407             dz_SSE3          = _mm_sub_ps(iz_SSE3,jz_SSE);
3408
3409             rbaj_SSE         = _mm_load_ps(rb+j);
3410
3411             fgb_SSE0         = _mm_mul_ps(rbai_SSE0,_mm_load_ps(dadx));
3412             dadx += 4;
3413             fgb_SSE1         = _mm_mul_ps(rbai_SSE1,_mm_load_ps(dadx));
3414             dadx += 4;
3415             fgb_SSE2         = _mm_mul_ps(rbai_SSE2,_mm_load_ps(dadx));
3416             dadx += 4;
3417             fgb_SSE3         = _mm_mul_ps(rbai_SSE3,_mm_load_ps(dadx));
3418             dadx += 4;
3419
3420             fgb_ai_SSE0      = _mm_mul_ps(rbaj_SSE,_mm_load_ps(dadx));
3421             dadx +=4;
3422             fgb_ai_SSE1      = _mm_mul_ps(rbaj_SSE,_mm_load_ps(dadx));
3423             dadx +=4;
3424             fgb_ai_SSE2      = _mm_mul_ps(rbaj_SSE,_mm_load_ps(dadx));
3425             dadx +=4;
3426             fgb_ai_SSE3      = _mm_mul_ps(rbaj_SSE,_mm_load_ps(dadx));
3427             dadx +=4;
3428
3429             /* Total force between ai and aj is the sum of ai->aj and aj->ai */
3430             fgb_SSE0         = _mm_add_ps(fgb_SSE0,fgb_ai_SSE0);
3431             fgb_SSE1         = _mm_add_ps(fgb_SSE1,fgb_ai_SSE1);
3432             fgb_SSE2         = _mm_add_ps(fgb_SSE2,fgb_ai_SSE2);
3433             fgb_SSE3         = _mm_add_ps(fgb_SSE3,fgb_ai_SSE3);
3434
3435             /* Calculate temporary vectorial force */
3436             tx_SSE0            = _mm_mul_ps(fgb_SSE0,dx_SSE0);
3437             ty_SSE0            = _mm_mul_ps(fgb_SSE0,dy_SSE0);
3438             tz_SSE0            = _mm_mul_ps(fgb_SSE0,dz_SSE0);
3439             tx_SSE1            = _mm_mul_ps(fgb_SSE1,dx_SSE1);
3440             ty_SSE1            = _mm_mul_ps(fgb_SSE1,dy_SSE1);
3441             tz_SSE1            = _mm_mul_ps(fgb_SSE1,dz_SSE1);
3442             tx_SSE2            = _mm_mul_ps(fgb_SSE2,dx_SSE2);
3443             ty_SSE2            = _mm_mul_ps(fgb_SSE2,dy_SSE2);
3444             tz_SSE2            = _mm_mul_ps(fgb_SSE2,dz_SSE2);
3445             tx_SSE3            = _mm_mul_ps(fgb_SSE3,dx_SSE3);
3446             ty_SSE3            = _mm_mul_ps(fgb_SSE3,dy_SSE3);
3447             tz_SSE3            = _mm_mul_ps(fgb_SSE3,dz_SSE3);
3448
3449             /* Increment i atom force */
3450             fix_SSE0          = _mm_add_ps(fix_SSE0,tx_SSE0);
3451             fiy_SSE0          = _mm_add_ps(fiy_SSE0,ty_SSE0);
3452             fiz_SSE0          = _mm_add_ps(fiz_SSE0,tz_SSE0);
3453             fix_SSE1          = _mm_add_ps(fix_SSE1,tx_SSE1);
3454             fiy_SSE1          = _mm_add_ps(fiy_SSE1,ty_SSE1);
3455             fiz_SSE1          = _mm_add_ps(fiz_SSE1,tz_SSE1);
3456             fix_SSE2          = _mm_add_ps(fix_SSE2,tx_SSE2);
3457             fiy_SSE2          = _mm_add_ps(fiy_SSE2,ty_SSE2);
3458             fiz_SSE2          = _mm_add_ps(fiz_SSE2,tz_SSE2);
3459             fix_SSE3          = _mm_add_ps(fix_SSE3,tx_SSE3);
3460             fiy_SSE3          = _mm_add_ps(fiy_SSE3,ty_SSE3);
3461             fiz_SSE3          = _mm_add_ps(fiz_SSE3,tz_SSE3);
3462
3463             /* Decrement j atom force */
3464             _mm_store_ps(fx_align+j,
3465                          _mm_sub_ps( _mm_load_ps(fx_align+j) , gmx_mm_sum4_ps(tx_SSE0,tx_SSE1,tx_SSE2,tx_SSE3) ));
3466             _mm_store_ps(fy_align+j,
3467                          _mm_sub_ps( _mm_load_ps(fy_align+j) , gmx_mm_sum4_ps(ty_SSE0,ty_SSE1,ty_SSE2,ty_SSE3) ));
3468             _mm_store_ps(fz_align+j,
3469                          _mm_sub_ps( _mm_load_ps(fz_align+j) , gmx_mm_sum4_ps(tz_SSE0,tz_SSE1,tz_SSE2,tz_SSE3) ));
3470         }
3471                 /* Add i forces to mem and shifted force list */
3472         _MM_TRANSPOSE4_PS(fix_SSE0,fix_SSE1,fix_SSE2,fix_SSE3);
3473         fix_SSE0 = _mm_add_ps(fix_SSE0,fix_SSE1);
3474         fix_SSE2 = _mm_add_ps(fix_SSE2,fix_SSE3);
3475         fix_SSE0 = _mm_add_ps(fix_SSE0,fix_SSE2);
3476         _mm_store_ps(fx_align+i, _mm_add_ps(fix_SSE0, _mm_load_ps(fx_align+i)));
3477
3478         _MM_TRANSPOSE4_PS(fiy_SSE0,fiy_SSE1,fiy_SSE2,fiy_SSE3);
3479         fiy_SSE0 = _mm_add_ps(fiy_SSE0,fiy_SSE1);
3480         fiy_SSE2 = _mm_add_ps(fiy_SSE2,fiy_SSE3);
3481         fiy_SSE0 = _mm_add_ps(fiy_SSE0,fiy_SSE2);
3482         _mm_store_ps(fy_align+i, _mm_add_ps(fiy_SSE0, _mm_load_ps(fy_align+i)));
3483
3484         _MM_TRANSPOSE4_PS(fiz_SSE0,fiz_SSE1,fiz_SSE2,fiz_SSE3);
3485         fiz_SSE0 = _mm_add_ps(fiz_SSE0,fiz_SSE1);
3486         fiz_SSE2 = _mm_add_ps(fiz_SSE2,fiz_SSE3);
3487         fiz_SSE0 = _mm_add_ps(fiz_SSE0,fiz_SSE2);
3488         _mm_store_ps(fz_align+i, _mm_add_ps(fiz_SSE0, _mm_load_ps(fz_align+i)));
3489         }
3490
3491     for(i=0;i<natoms;i++)
3492         {
3493                 f[3*i]       += fx_align[i] + fx_align[natoms+i];
3494                 f[3*i+1]     += fy_align[i] + fy_align[natoms+i];
3495                 f[3*i+2]     += fz_align[i] + fz_align[natoms+i];
3496     }
3497
3498         return 0;
3499 }
3500
3501 #else
3502 /* dummy variable when not using SSE */
3503 int genborn_allvsall_sse2_single_dummy;
3504
3505
3506 #endif
3507