Introduce gmxpre.h for truly global definitions
[alexxy/gromacs.git] / src / gromacs / gmxlib / nonbonded / nb_kernel_sse4_1_single / nb_kernel_ElecCoul_VdwNone_GeomW4W4_sse4_1_single.c
1 /*
2  * This file is part of the GROMACS molecular simulation package.
3  *
4  * Copyright (c) 2012,2013,2014, by the GROMACS development team, led by
5  * Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
6  * and including many others, as listed in the AUTHORS file in the
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35 /*
36  * Note: this file was generated by the GROMACS sse4_1_single kernel generator.
37  */
38 #include "gmxpre.h"
39
40 #include "config.h"
41
42 #include <math.h>
43
44 #include "../nb_kernel.h"
45 #include "gromacs/legacyheaders/types/simple.h"
46 #include "gromacs/math/vec.h"
47 #include "gromacs/legacyheaders/nrnb.h"
48
49 #include "gromacs/simd/math_x86_sse4_1_single.h"
50 #include "kernelutil_x86_sse4_1_single.h"
51
52 /*
53  * Gromacs nonbonded kernel:   nb_kernel_ElecCoul_VdwNone_GeomW4W4_VF_sse4_1_single
54  * Electrostatics interaction: Coulomb
55  * VdW interaction:            None
56  * Geometry:                   Water4-Water4
57  * Calculate force/pot:        PotentialAndForce
58  */
59 void
60 nb_kernel_ElecCoul_VdwNone_GeomW4W4_VF_sse4_1_single
61                     (t_nblist                    * gmx_restrict       nlist,
62                      rvec                        * gmx_restrict          xx,
63                      rvec                        * gmx_restrict          ff,
64                      t_forcerec                  * gmx_restrict          fr,
65                      t_mdatoms                   * gmx_restrict     mdatoms,
66                      nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
67                      t_nrnb                      * gmx_restrict        nrnb)
68 {
69     /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or 
70      * just 0 for non-waters.
71      * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
72      * jnr indices corresponding to data put in the four positions in the SIMD register.
73      */
74     int              i_shift_offset,i_coord_offset,outeriter,inneriter;
75     int              j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
76     int              jnrA,jnrB,jnrC,jnrD;
77     int              jnrlistA,jnrlistB,jnrlistC,jnrlistD;
78     int              j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
79     int              *iinr,*jindex,*jjnr,*shiftidx,*gid;
80     real             rcutoff_scalar;
81     real             *shiftvec,*fshift,*x,*f;
82     real             *fjptrA,*fjptrB,*fjptrC,*fjptrD;
83     real             scratch[4*DIM];
84     __m128           tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
85     int              vdwioffset1;
86     __m128           ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
87     int              vdwioffset2;
88     __m128           ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
89     int              vdwioffset3;
90     __m128           ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
91     int              vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
92     __m128           jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
93     int              vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
94     __m128           jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
95     int              vdwjidx3A,vdwjidx3B,vdwjidx3C,vdwjidx3D;
96     __m128           jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
97     __m128           dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
98     __m128           dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
99     __m128           dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
100     __m128           dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
101     __m128           dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
102     __m128           dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
103     __m128           dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
104     __m128           dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
105     __m128           dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
106     __m128           velec,felec,velecsum,facel,crf,krf,krf2;
107     real             *charge;
108     __m128           dummy_mask,cutoff_mask;
109     __m128           signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
110     __m128           one     = _mm_set1_ps(1.0);
111     __m128           two     = _mm_set1_ps(2.0);
112     x                = xx[0];
113     f                = ff[0];
114
115     nri              = nlist->nri;
116     iinr             = nlist->iinr;
117     jindex           = nlist->jindex;
118     jjnr             = nlist->jjnr;
119     shiftidx         = nlist->shift;
120     gid              = nlist->gid;
121     shiftvec         = fr->shift_vec[0];
122     fshift           = fr->fshift[0];
123     facel            = _mm_set1_ps(fr->epsfac);
124     charge           = mdatoms->chargeA;
125
126     /* Setup water-specific parameters */
127     inr              = nlist->iinr[0];
128     iq1              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
129     iq2              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
130     iq3              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+3]));
131
132     jq1              = _mm_set1_ps(charge[inr+1]);
133     jq2              = _mm_set1_ps(charge[inr+2]);
134     jq3              = _mm_set1_ps(charge[inr+3]);
135     qq11             = _mm_mul_ps(iq1,jq1);
136     qq12             = _mm_mul_ps(iq1,jq2);
137     qq13             = _mm_mul_ps(iq1,jq3);
138     qq21             = _mm_mul_ps(iq2,jq1);
139     qq22             = _mm_mul_ps(iq2,jq2);
140     qq23             = _mm_mul_ps(iq2,jq3);
141     qq31             = _mm_mul_ps(iq3,jq1);
142     qq32             = _mm_mul_ps(iq3,jq2);
143     qq33             = _mm_mul_ps(iq3,jq3);
144
145     /* Avoid stupid compiler warnings */
146     jnrA = jnrB = jnrC = jnrD = 0;
147     j_coord_offsetA = 0;
148     j_coord_offsetB = 0;
149     j_coord_offsetC = 0;
150     j_coord_offsetD = 0;
151
152     outeriter        = 0;
153     inneriter        = 0;
154
155     for(iidx=0;iidx<4*DIM;iidx++)
156     {
157         scratch[iidx] = 0.0;
158     }
159
160     /* Start outer loop over neighborlists */
161     for(iidx=0; iidx<nri; iidx++)
162     {
163         /* Load shift vector for this list */
164         i_shift_offset   = DIM*shiftidx[iidx];
165
166         /* Load limits for loop over neighbors */
167         j_index_start    = jindex[iidx];
168         j_index_end      = jindex[iidx+1];
169
170         /* Get outer coordinate index */
171         inr              = iinr[iidx];
172         i_coord_offset   = DIM*inr;
173
174         /* Load i particle coords and add shift vector */
175         gmx_mm_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset+DIM,
176                                                  &ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
177
178         fix1             = _mm_setzero_ps();
179         fiy1             = _mm_setzero_ps();
180         fiz1             = _mm_setzero_ps();
181         fix2             = _mm_setzero_ps();
182         fiy2             = _mm_setzero_ps();
183         fiz2             = _mm_setzero_ps();
184         fix3             = _mm_setzero_ps();
185         fiy3             = _mm_setzero_ps();
186         fiz3             = _mm_setzero_ps();
187
188         /* Reset potential sums */
189         velecsum         = _mm_setzero_ps();
190
191         /* Start inner kernel loop */
192         for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
193         {
194
195             /* Get j neighbor index, and coordinate index */
196             jnrA             = jjnr[jidx];
197             jnrB             = jjnr[jidx+1];
198             jnrC             = jjnr[jidx+2];
199             jnrD             = jjnr[jidx+3];
200             j_coord_offsetA  = DIM*jnrA;
201             j_coord_offsetB  = DIM*jnrB;
202             j_coord_offsetC  = DIM*jnrC;
203             j_coord_offsetD  = DIM*jnrD;
204
205             /* load j atom coordinates */
206             gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
207                                               x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
208                                               &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
209
210             /* Calculate displacement vector */
211             dx11             = _mm_sub_ps(ix1,jx1);
212             dy11             = _mm_sub_ps(iy1,jy1);
213             dz11             = _mm_sub_ps(iz1,jz1);
214             dx12             = _mm_sub_ps(ix1,jx2);
215             dy12             = _mm_sub_ps(iy1,jy2);
216             dz12             = _mm_sub_ps(iz1,jz2);
217             dx13             = _mm_sub_ps(ix1,jx3);
218             dy13             = _mm_sub_ps(iy1,jy3);
219             dz13             = _mm_sub_ps(iz1,jz3);
220             dx21             = _mm_sub_ps(ix2,jx1);
221             dy21             = _mm_sub_ps(iy2,jy1);
222             dz21             = _mm_sub_ps(iz2,jz1);
223             dx22             = _mm_sub_ps(ix2,jx2);
224             dy22             = _mm_sub_ps(iy2,jy2);
225             dz22             = _mm_sub_ps(iz2,jz2);
226             dx23             = _mm_sub_ps(ix2,jx3);
227             dy23             = _mm_sub_ps(iy2,jy3);
228             dz23             = _mm_sub_ps(iz2,jz3);
229             dx31             = _mm_sub_ps(ix3,jx1);
230             dy31             = _mm_sub_ps(iy3,jy1);
231             dz31             = _mm_sub_ps(iz3,jz1);
232             dx32             = _mm_sub_ps(ix3,jx2);
233             dy32             = _mm_sub_ps(iy3,jy2);
234             dz32             = _mm_sub_ps(iz3,jz2);
235             dx33             = _mm_sub_ps(ix3,jx3);
236             dy33             = _mm_sub_ps(iy3,jy3);
237             dz33             = _mm_sub_ps(iz3,jz3);
238
239             /* Calculate squared distance and things based on it */
240             rsq11            = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
241             rsq12            = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
242             rsq13            = gmx_mm_calc_rsq_ps(dx13,dy13,dz13);
243             rsq21            = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
244             rsq22            = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
245             rsq23            = gmx_mm_calc_rsq_ps(dx23,dy23,dz23);
246             rsq31            = gmx_mm_calc_rsq_ps(dx31,dy31,dz31);
247             rsq32            = gmx_mm_calc_rsq_ps(dx32,dy32,dz32);
248             rsq33            = gmx_mm_calc_rsq_ps(dx33,dy33,dz33);
249
250             rinv11           = gmx_mm_invsqrt_ps(rsq11);
251             rinv12           = gmx_mm_invsqrt_ps(rsq12);
252             rinv13           = gmx_mm_invsqrt_ps(rsq13);
253             rinv21           = gmx_mm_invsqrt_ps(rsq21);
254             rinv22           = gmx_mm_invsqrt_ps(rsq22);
255             rinv23           = gmx_mm_invsqrt_ps(rsq23);
256             rinv31           = gmx_mm_invsqrt_ps(rsq31);
257             rinv32           = gmx_mm_invsqrt_ps(rsq32);
258             rinv33           = gmx_mm_invsqrt_ps(rsq33);
259
260             rinvsq11         = _mm_mul_ps(rinv11,rinv11);
261             rinvsq12         = _mm_mul_ps(rinv12,rinv12);
262             rinvsq13         = _mm_mul_ps(rinv13,rinv13);
263             rinvsq21         = _mm_mul_ps(rinv21,rinv21);
264             rinvsq22         = _mm_mul_ps(rinv22,rinv22);
265             rinvsq23         = _mm_mul_ps(rinv23,rinv23);
266             rinvsq31         = _mm_mul_ps(rinv31,rinv31);
267             rinvsq32         = _mm_mul_ps(rinv32,rinv32);
268             rinvsq33         = _mm_mul_ps(rinv33,rinv33);
269
270             fjx1             = _mm_setzero_ps();
271             fjy1             = _mm_setzero_ps();
272             fjz1             = _mm_setzero_ps();
273             fjx2             = _mm_setzero_ps();
274             fjy2             = _mm_setzero_ps();
275             fjz2             = _mm_setzero_ps();
276             fjx3             = _mm_setzero_ps();
277             fjy3             = _mm_setzero_ps();
278             fjz3             = _mm_setzero_ps();
279
280             /**************************
281              * CALCULATE INTERACTIONS *
282              **************************/
283
284             /* COULOMB ELECTROSTATICS */
285             velec            = _mm_mul_ps(qq11,rinv11);
286             felec            = _mm_mul_ps(velec,rinvsq11);
287
288             /* Update potential sum for this i atom from the interaction with this j atom. */
289             velecsum         = _mm_add_ps(velecsum,velec);
290
291             fscal            = felec;
292
293             /* Calculate temporary vectorial force */
294             tx               = _mm_mul_ps(fscal,dx11);
295             ty               = _mm_mul_ps(fscal,dy11);
296             tz               = _mm_mul_ps(fscal,dz11);
297
298             /* Update vectorial force */
299             fix1             = _mm_add_ps(fix1,tx);
300             fiy1             = _mm_add_ps(fiy1,ty);
301             fiz1             = _mm_add_ps(fiz1,tz);
302
303             fjx1             = _mm_add_ps(fjx1,tx);
304             fjy1             = _mm_add_ps(fjy1,ty);
305             fjz1             = _mm_add_ps(fjz1,tz);
306
307             /**************************
308              * CALCULATE INTERACTIONS *
309              **************************/
310
311             /* COULOMB ELECTROSTATICS */
312             velec            = _mm_mul_ps(qq12,rinv12);
313             felec            = _mm_mul_ps(velec,rinvsq12);
314
315             /* Update potential sum for this i atom from the interaction with this j atom. */
316             velecsum         = _mm_add_ps(velecsum,velec);
317
318             fscal            = felec;
319
320             /* Calculate temporary vectorial force */
321             tx               = _mm_mul_ps(fscal,dx12);
322             ty               = _mm_mul_ps(fscal,dy12);
323             tz               = _mm_mul_ps(fscal,dz12);
324
325             /* Update vectorial force */
326             fix1             = _mm_add_ps(fix1,tx);
327             fiy1             = _mm_add_ps(fiy1,ty);
328             fiz1             = _mm_add_ps(fiz1,tz);
329
330             fjx2             = _mm_add_ps(fjx2,tx);
331             fjy2             = _mm_add_ps(fjy2,ty);
332             fjz2             = _mm_add_ps(fjz2,tz);
333
334             /**************************
335              * CALCULATE INTERACTIONS *
336              **************************/
337
338             /* COULOMB ELECTROSTATICS */
339             velec            = _mm_mul_ps(qq13,rinv13);
340             felec            = _mm_mul_ps(velec,rinvsq13);
341
342             /* Update potential sum for this i atom from the interaction with this j atom. */
343             velecsum         = _mm_add_ps(velecsum,velec);
344
345             fscal            = felec;
346
347             /* Calculate temporary vectorial force */
348             tx               = _mm_mul_ps(fscal,dx13);
349             ty               = _mm_mul_ps(fscal,dy13);
350             tz               = _mm_mul_ps(fscal,dz13);
351
352             /* Update vectorial force */
353             fix1             = _mm_add_ps(fix1,tx);
354             fiy1             = _mm_add_ps(fiy1,ty);
355             fiz1             = _mm_add_ps(fiz1,tz);
356
357             fjx3             = _mm_add_ps(fjx3,tx);
358             fjy3             = _mm_add_ps(fjy3,ty);
359             fjz3             = _mm_add_ps(fjz3,tz);
360
361             /**************************
362              * CALCULATE INTERACTIONS *
363              **************************/
364
365             /* COULOMB ELECTROSTATICS */
366             velec            = _mm_mul_ps(qq21,rinv21);
367             felec            = _mm_mul_ps(velec,rinvsq21);
368
369             /* Update potential sum for this i atom from the interaction with this j atom. */
370             velecsum         = _mm_add_ps(velecsum,velec);
371
372             fscal            = felec;
373
374             /* Calculate temporary vectorial force */
375             tx               = _mm_mul_ps(fscal,dx21);
376             ty               = _mm_mul_ps(fscal,dy21);
377             tz               = _mm_mul_ps(fscal,dz21);
378
379             /* Update vectorial force */
380             fix2             = _mm_add_ps(fix2,tx);
381             fiy2             = _mm_add_ps(fiy2,ty);
382             fiz2             = _mm_add_ps(fiz2,tz);
383
384             fjx1             = _mm_add_ps(fjx1,tx);
385             fjy1             = _mm_add_ps(fjy1,ty);
386             fjz1             = _mm_add_ps(fjz1,tz);
387
388             /**************************
389              * CALCULATE INTERACTIONS *
390              **************************/
391
392             /* COULOMB ELECTROSTATICS */
393             velec            = _mm_mul_ps(qq22,rinv22);
394             felec            = _mm_mul_ps(velec,rinvsq22);
395
396             /* Update potential sum for this i atom from the interaction with this j atom. */
397             velecsum         = _mm_add_ps(velecsum,velec);
398
399             fscal            = felec;
400
401             /* Calculate temporary vectorial force */
402             tx               = _mm_mul_ps(fscal,dx22);
403             ty               = _mm_mul_ps(fscal,dy22);
404             tz               = _mm_mul_ps(fscal,dz22);
405
406             /* Update vectorial force */
407             fix2             = _mm_add_ps(fix2,tx);
408             fiy2             = _mm_add_ps(fiy2,ty);
409             fiz2             = _mm_add_ps(fiz2,tz);
410
411             fjx2             = _mm_add_ps(fjx2,tx);
412             fjy2             = _mm_add_ps(fjy2,ty);
413             fjz2             = _mm_add_ps(fjz2,tz);
414
415             /**************************
416              * CALCULATE INTERACTIONS *
417              **************************/
418
419             /* COULOMB ELECTROSTATICS */
420             velec            = _mm_mul_ps(qq23,rinv23);
421             felec            = _mm_mul_ps(velec,rinvsq23);
422
423             /* Update potential sum for this i atom from the interaction with this j atom. */
424             velecsum         = _mm_add_ps(velecsum,velec);
425
426             fscal            = felec;
427
428             /* Calculate temporary vectorial force */
429             tx               = _mm_mul_ps(fscal,dx23);
430             ty               = _mm_mul_ps(fscal,dy23);
431             tz               = _mm_mul_ps(fscal,dz23);
432
433             /* Update vectorial force */
434             fix2             = _mm_add_ps(fix2,tx);
435             fiy2             = _mm_add_ps(fiy2,ty);
436             fiz2             = _mm_add_ps(fiz2,tz);
437
438             fjx3             = _mm_add_ps(fjx3,tx);
439             fjy3             = _mm_add_ps(fjy3,ty);
440             fjz3             = _mm_add_ps(fjz3,tz);
441
442             /**************************
443              * CALCULATE INTERACTIONS *
444              **************************/
445
446             /* COULOMB ELECTROSTATICS */
447             velec            = _mm_mul_ps(qq31,rinv31);
448             felec            = _mm_mul_ps(velec,rinvsq31);
449
450             /* Update potential sum for this i atom from the interaction with this j atom. */
451             velecsum         = _mm_add_ps(velecsum,velec);
452
453             fscal            = felec;
454
455             /* Calculate temporary vectorial force */
456             tx               = _mm_mul_ps(fscal,dx31);
457             ty               = _mm_mul_ps(fscal,dy31);
458             tz               = _mm_mul_ps(fscal,dz31);
459
460             /* Update vectorial force */
461             fix3             = _mm_add_ps(fix3,tx);
462             fiy3             = _mm_add_ps(fiy3,ty);
463             fiz3             = _mm_add_ps(fiz3,tz);
464
465             fjx1             = _mm_add_ps(fjx1,tx);
466             fjy1             = _mm_add_ps(fjy1,ty);
467             fjz1             = _mm_add_ps(fjz1,tz);
468
469             /**************************
470              * CALCULATE INTERACTIONS *
471              **************************/
472
473             /* COULOMB ELECTROSTATICS */
474             velec            = _mm_mul_ps(qq32,rinv32);
475             felec            = _mm_mul_ps(velec,rinvsq32);
476
477             /* Update potential sum for this i atom from the interaction with this j atom. */
478             velecsum         = _mm_add_ps(velecsum,velec);
479
480             fscal            = felec;
481
482             /* Calculate temporary vectorial force */
483             tx               = _mm_mul_ps(fscal,dx32);
484             ty               = _mm_mul_ps(fscal,dy32);
485             tz               = _mm_mul_ps(fscal,dz32);
486
487             /* Update vectorial force */
488             fix3             = _mm_add_ps(fix3,tx);
489             fiy3             = _mm_add_ps(fiy3,ty);
490             fiz3             = _mm_add_ps(fiz3,tz);
491
492             fjx2             = _mm_add_ps(fjx2,tx);
493             fjy2             = _mm_add_ps(fjy2,ty);
494             fjz2             = _mm_add_ps(fjz2,tz);
495
496             /**************************
497              * CALCULATE INTERACTIONS *
498              **************************/
499
500             /* COULOMB ELECTROSTATICS */
501             velec            = _mm_mul_ps(qq33,rinv33);
502             felec            = _mm_mul_ps(velec,rinvsq33);
503
504             /* Update potential sum for this i atom from the interaction with this j atom. */
505             velecsum         = _mm_add_ps(velecsum,velec);
506
507             fscal            = felec;
508
509             /* Calculate temporary vectorial force */
510             tx               = _mm_mul_ps(fscal,dx33);
511             ty               = _mm_mul_ps(fscal,dy33);
512             tz               = _mm_mul_ps(fscal,dz33);
513
514             /* Update vectorial force */
515             fix3             = _mm_add_ps(fix3,tx);
516             fiy3             = _mm_add_ps(fiy3,ty);
517             fiz3             = _mm_add_ps(fiz3,tz);
518
519             fjx3             = _mm_add_ps(fjx3,tx);
520             fjy3             = _mm_add_ps(fjy3,ty);
521             fjz3             = _mm_add_ps(fjz3,tz);
522
523             fjptrA             = f+j_coord_offsetA;
524             fjptrB             = f+j_coord_offsetB;
525             fjptrC             = f+j_coord_offsetC;
526             fjptrD             = f+j_coord_offsetD;
527
528             gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA+DIM,fjptrB+DIM,fjptrC+DIM,fjptrD+DIM,
529                                                    fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
530
531             /* Inner loop uses 252 flops */
532         }
533
534         if(jidx<j_index_end)
535         {
536
537             /* Get j neighbor index, and coordinate index */
538             jnrlistA         = jjnr[jidx];
539             jnrlistB         = jjnr[jidx+1];
540             jnrlistC         = jjnr[jidx+2];
541             jnrlistD         = jjnr[jidx+3];
542             /* Sign of each element will be negative for non-real atoms.
543              * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
544              * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
545              */
546             dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
547             jnrA       = (jnrlistA>=0) ? jnrlistA : 0;
548             jnrB       = (jnrlistB>=0) ? jnrlistB : 0;
549             jnrC       = (jnrlistC>=0) ? jnrlistC : 0;
550             jnrD       = (jnrlistD>=0) ? jnrlistD : 0;
551             j_coord_offsetA  = DIM*jnrA;
552             j_coord_offsetB  = DIM*jnrB;
553             j_coord_offsetC  = DIM*jnrC;
554             j_coord_offsetD  = DIM*jnrD;
555
556             /* load j atom coordinates */
557             gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
558                                               x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
559                                               &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
560
561             /* Calculate displacement vector */
562             dx11             = _mm_sub_ps(ix1,jx1);
563             dy11             = _mm_sub_ps(iy1,jy1);
564             dz11             = _mm_sub_ps(iz1,jz1);
565             dx12             = _mm_sub_ps(ix1,jx2);
566             dy12             = _mm_sub_ps(iy1,jy2);
567             dz12             = _mm_sub_ps(iz1,jz2);
568             dx13             = _mm_sub_ps(ix1,jx3);
569             dy13             = _mm_sub_ps(iy1,jy3);
570             dz13             = _mm_sub_ps(iz1,jz3);
571             dx21             = _mm_sub_ps(ix2,jx1);
572             dy21             = _mm_sub_ps(iy2,jy1);
573             dz21             = _mm_sub_ps(iz2,jz1);
574             dx22             = _mm_sub_ps(ix2,jx2);
575             dy22             = _mm_sub_ps(iy2,jy2);
576             dz22             = _mm_sub_ps(iz2,jz2);
577             dx23             = _mm_sub_ps(ix2,jx3);
578             dy23             = _mm_sub_ps(iy2,jy3);
579             dz23             = _mm_sub_ps(iz2,jz3);
580             dx31             = _mm_sub_ps(ix3,jx1);
581             dy31             = _mm_sub_ps(iy3,jy1);
582             dz31             = _mm_sub_ps(iz3,jz1);
583             dx32             = _mm_sub_ps(ix3,jx2);
584             dy32             = _mm_sub_ps(iy3,jy2);
585             dz32             = _mm_sub_ps(iz3,jz2);
586             dx33             = _mm_sub_ps(ix3,jx3);
587             dy33             = _mm_sub_ps(iy3,jy3);
588             dz33             = _mm_sub_ps(iz3,jz3);
589
590             /* Calculate squared distance and things based on it */
591             rsq11            = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
592             rsq12            = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
593             rsq13            = gmx_mm_calc_rsq_ps(dx13,dy13,dz13);
594             rsq21            = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
595             rsq22            = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
596             rsq23            = gmx_mm_calc_rsq_ps(dx23,dy23,dz23);
597             rsq31            = gmx_mm_calc_rsq_ps(dx31,dy31,dz31);
598             rsq32            = gmx_mm_calc_rsq_ps(dx32,dy32,dz32);
599             rsq33            = gmx_mm_calc_rsq_ps(dx33,dy33,dz33);
600
601             rinv11           = gmx_mm_invsqrt_ps(rsq11);
602             rinv12           = gmx_mm_invsqrt_ps(rsq12);
603             rinv13           = gmx_mm_invsqrt_ps(rsq13);
604             rinv21           = gmx_mm_invsqrt_ps(rsq21);
605             rinv22           = gmx_mm_invsqrt_ps(rsq22);
606             rinv23           = gmx_mm_invsqrt_ps(rsq23);
607             rinv31           = gmx_mm_invsqrt_ps(rsq31);
608             rinv32           = gmx_mm_invsqrt_ps(rsq32);
609             rinv33           = gmx_mm_invsqrt_ps(rsq33);
610
611             rinvsq11         = _mm_mul_ps(rinv11,rinv11);
612             rinvsq12         = _mm_mul_ps(rinv12,rinv12);
613             rinvsq13         = _mm_mul_ps(rinv13,rinv13);
614             rinvsq21         = _mm_mul_ps(rinv21,rinv21);
615             rinvsq22         = _mm_mul_ps(rinv22,rinv22);
616             rinvsq23         = _mm_mul_ps(rinv23,rinv23);
617             rinvsq31         = _mm_mul_ps(rinv31,rinv31);
618             rinvsq32         = _mm_mul_ps(rinv32,rinv32);
619             rinvsq33         = _mm_mul_ps(rinv33,rinv33);
620
621             fjx1             = _mm_setzero_ps();
622             fjy1             = _mm_setzero_ps();
623             fjz1             = _mm_setzero_ps();
624             fjx2             = _mm_setzero_ps();
625             fjy2             = _mm_setzero_ps();
626             fjz2             = _mm_setzero_ps();
627             fjx3             = _mm_setzero_ps();
628             fjy3             = _mm_setzero_ps();
629             fjz3             = _mm_setzero_ps();
630
631             /**************************
632              * CALCULATE INTERACTIONS *
633              **************************/
634
635             /* COULOMB ELECTROSTATICS */
636             velec            = _mm_mul_ps(qq11,rinv11);
637             felec            = _mm_mul_ps(velec,rinvsq11);
638
639             /* Update potential sum for this i atom from the interaction with this j atom. */
640             velec            = _mm_andnot_ps(dummy_mask,velec);
641             velecsum         = _mm_add_ps(velecsum,velec);
642
643             fscal            = felec;
644
645             fscal            = _mm_andnot_ps(dummy_mask,fscal);
646
647             /* Calculate temporary vectorial force */
648             tx               = _mm_mul_ps(fscal,dx11);
649             ty               = _mm_mul_ps(fscal,dy11);
650             tz               = _mm_mul_ps(fscal,dz11);
651
652             /* Update vectorial force */
653             fix1             = _mm_add_ps(fix1,tx);
654             fiy1             = _mm_add_ps(fiy1,ty);
655             fiz1             = _mm_add_ps(fiz1,tz);
656
657             fjx1             = _mm_add_ps(fjx1,tx);
658             fjy1             = _mm_add_ps(fjy1,ty);
659             fjz1             = _mm_add_ps(fjz1,tz);
660
661             /**************************
662              * CALCULATE INTERACTIONS *
663              **************************/
664
665             /* COULOMB ELECTROSTATICS */
666             velec            = _mm_mul_ps(qq12,rinv12);
667             felec            = _mm_mul_ps(velec,rinvsq12);
668
669             /* Update potential sum for this i atom from the interaction with this j atom. */
670             velec            = _mm_andnot_ps(dummy_mask,velec);
671             velecsum         = _mm_add_ps(velecsum,velec);
672
673             fscal            = felec;
674
675             fscal            = _mm_andnot_ps(dummy_mask,fscal);
676
677             /* Calculate temporary vectorial force */
678             tx               = _mm_mul_ps(fscal,dx12);
679             ty               = _mm_mul_ps(fscal,dy12);
680             tz               = _mm_mul_ps(fscal,dz12);
681
682             /* Update vectorial force */
683             fix1             = _mm_add_ps(fix1,tx);
684             fiy1             = _mm_add_ps(fiy1,ty);
685             fiz1             = _mm_add_ps(fiz1,tz);
686
687             fjx2             = _mm_add_ps(fjx2,tx);
688             fjy2             = _mm_add_ps(fjy2,ty);
689             fjz2             = _mm_add_ps(fjz2,tz);
690
691             /**************************
692              * CALCULATE INTERACTIONS *
693              **************************/
694
695             /* COULOMB ELECTROSTATICS */
696             velec            = _mm_mul_ps(qq13,rinv13);
697             felec            = _mm_mul_ps(velec,rinvsq13);
698
699             /* Update potential sum for this i atom from the interaction with this j atom. */
700             velec            = _mm_andnot_ps(dummy_mask,velec);
701             velecsum         = _mm_add_ps(velecsum,velec);
702
703             fscal            = felec;
704
705             fscal            = _mm_andnot_ps(dummy_mask,fscal);
706
707             /* Calculate temporary vectorial force */
708             tx               = _mm_mul_ps(fscal,dx13);
709             ty               = _mm_mul_ps(fscal,dy13);
710             tz               = _mm_mul_ps(fscal,dz13);
711
712             /* Update vectorial force */
713             fix1             = _mm_add_ps(fix1,tx);
714             fiy1             = _mm_add_ps(fiy1,ty);
715             fiz1             = _mm_add_ps(fiz1,tz);
716
717             fjx3             = _mm_add_ps(fjx3,tx);
718             fjy3             = _mm_add_ps(fjy3,ty);
719             fjz3             = _mm_add_ps(fjz3,tz);
720
721             /**************************
722              * CALCULATE INTERACTIONS *
723              **************************/
724
725             /* COULOMB ELECTROSTATICS */
726             velec            = _mm_mul_ps(qq21,rinv21);
727             felec            = _mm_mul_ps(velec,rinvsq21);
728
729             /* Update potential sum for this i atom from the interaction with this j atom. */
730             velec            = _mm_andnot_ps(dummy_mask,velec);
731             velecsum         = _mm_add_ps(velecsum,velec);
732
733             fscal            = felec;
734
735             fscal            = _mm_andnot_ps(dummy_mask,fscal);
736
737             /* Calculate temporary vectorial force */
738             tx               = _mm_mul_ps(fscal,dx21);
739             ty               = _mm_mul_ps(fscal,dy21);
740             tz               = _mm_mul_ps(fscal,dz21);
741
742             /* Update vectorial force */
743             fix2             = _mm_add_ps(fix2,tx);
744             fiy2             = _mm_add_ps(fiy2,ty);
745             fiz2             = _mm_add_ps(fiz2,tz);
746
747             fjx1             = _mm_add_ps(fjx1,tx);
748             fjy1             = _mm_add_ps(fjy1,ty);
749             fjz1             = _mm_add_ps(fjz1,tz);
750
751             /**************************
752              * CALCULATE INTERACTIONS *
753              **************************/
754
755             /* COULOMB ELECTROSTATICS */
756             velec            = _mm_mul_ps(qq22,rinv22);
757             felec            = _mm_mul_ps(velec,rinvsq22);
758
759             /* Update potential sum for this i atom from the interaction with this j atom. */
760             velec            = _mm_andnot_ps(dummy_mask,velec);
761             velecsum         = _mm_add_ps(velecsum,velec);
762
763             fscal            = felec;
764
765             fscal            = _mm_andnot_ps(dummy_mask,fscal);
766
767             /* Calculate temporary vectorial force */
768             tx               = _mm_mul_ps(fscal,dx22);
769             ty               = _mm_mul_ps(fscal,dy22);
770             tz               = _mm_mul_ps(fscal,dz22);
771
772             /* Update vectorial force */
773             fix2             = _mm_add_ps(fix2,tx);
774             fiy2             = _mm_add_ps(fiy2,ty);
775             fiz2             = _mm_add_ps(fiz2,tz);
776
777             fjx2             = _mm_add_ps(fjx2,tx);
778             fjy2             = _mm_add_ps(fjy2,ty);
779             fjz2             = _mm_add_ps(fjz2,tz);
780
781             /**************************
782              * CALCULATE INTERACTIONS *
783              **************************/
784
785             /* COULOMB ELECTROSTATICS */
786             velec            = _mm_mul_ps(qq23,rinv23);
787             felec            = _mm_mul_ps(velec,rinvsq23);
788
789             /* Update potential sum for this i atom from the interaction with this j atom. */
790             velec            = _mm_andnot_ps(dummy_mask,velec);
791             velecsum         = _mm_add_ps(velecsum,velec);
792
793             fscal            = felec;
794
795             fscal            = _mm_andnot_ps(dummy_mask,fscal);
796
797             /* Calculate temporary vectorial force */
798             tx               = _mm_mul_ps(fscal,dx23);
799             ty               = _mm_mul_ps(fscal,dy23);
800             tz               = _mm_mul_ps(fscal,dz23);
801
802             /* Update vectorial force */
803             fix2             = _mm_add_ps(fix2,tx);
804             fiy2             = _mm_add_ps(fiy2,ty);
805             fiz2             = _mm_add_ps(fiz2,tz);
806
807             fjx3             = _mm_add_ps(fjx3,tx);
808             fjy3             = _mm_add_ps(fjy3,ty);
809             fjz3             = _mm_add_ps(fjz3,tz);
810
811             /**************************
812              * CALCULATE INTERACTIONS *
813              **************************/
814
815             /* COULOMB ELECTROSTATICS */
816             velec            = _mm_mul_ps(qq31,rinv31);
817             felec            = _mm_mul_ps(velec,rinvsq31);
818
819             /* Update potential sum for this i atom from the interaction with this j atom. */
820             velec            = _mm_andnot_ps(dummy_mask,velec);
821             velecsum         = _mm_add_ps(velecsum,velec);
822
823             fscal            = felec;
824
825             fscal            = _mm_andnot_ps(dummy_mask,fscal);
826
827             /* Calculate temporary vectorial force */
828             tx               = _mm_mul_ps(fscal,dx31);
829             ty               = _mm_mul_ps(fscal,dy31);
830             tz               = _mm_mul_ps(fscal,dz31);
831
832             /* Update vectorial force */
833             fix3             = _mm_add_ps(fix3,tx);
834             fiy3             = _mm_add_ps(fiy3,ty);
835             fiz3             = _mm_add_ps(fiz3,tz);
836
837             fjx1             = _mm_add_ps(fjx1,tx);
838             fjy1             = _mm_add_ps(fjy1,ty);
839             fjz1             = _mm_add_ps(fjz1,tz);
840
841             /**************************
842              * CALCULATE INTERACTIONS *
843              **************************/
844
845             /* COULOMB ELECTROSTATICS */
846             velec            = _mm_mul_ps(qq32,rinv32);
847             felec            = _mm_mul_ps(velec,rinvsq32);
848
849             /* Update potential sum for this i atom from the interaction with this j atom. */
850             velec            = _mm_andnot_ps(dummy_mask,velec);
851             velecsum         = _mm_add_ps(velecsum,velec);
852
853             fscal            = felec;
854
855             fscal            = _mm_andnot_ps(dummy_mask,fscal);
856
857             /* Calculate temporary vectorial force */
858             tx               = _mm_mul_ps(fscal,dx32);
859             ty               = _mm_mul_ps(fscal,dy32);
860             tz               = _mm_mul_ps(fscal,dz32);
861
862             /* Update vectorial force */
863             fix3             = _mm_add_ps(fix3,tx);
864             fiy3             = _mm_add_ps(fiy3,ty);
865             fiz3             = _mm_add_ps(fiz3,tz);
866
867             fjx2             = _mm_add_ps(fjx2,tx);
868             fjy2             = _mm_add_ps(fjy2,ty);
869             fjz2             = _mm_add_ps(fjz2,tz);
870
871             /**************************
872              * CALCULATE INTERACTIONS *
873              **************************/
874
875             /* COULOMB ELECTROSTATICS */
876             velec            = _mm_mul_ps(qq33,rinv33);
877             felec            = _mm_mul_ps(velec,rinvsq33);
878
879             /* Update potential sum for this i atom from the interaction with this j atom. */
880             velec            = _mm_andnot_ps(dummy_mask,velec);
881             velecsum         = _mm_add_ps(velecsum,velec);
882
883             fscal            = felec;
884
885             fscal            = _mm_andnot_ps(dummy_mask,fscal);
886
887             /* Calculate temporary vectorial force */
888             tx               = _mm_mul_ps(fscal,dx33);
889             ty               = _mm_mul_ps(fscal,dy33);
890             tz               = _mm_mul_ps(fscal,dz33);
891
892             /* Update vectorial force */
893             fix3             = _mm_add_ps(fix3,tx);
894             fiy3             = _mm_add_ps(fiy3,ty);
895             fiz3             = _mm_add_ps(fiz3,tz);
896
897             fjx3             = _mm_add_ps(fjx3,tx);
898             fjy3             = _mm_add_ps(fjy3,ty);
899             fjz3             = _mm_add_ps(fjz3,tz);
900
901             fjptrA             = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
902             fjptrB             = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
903             fjptrC             = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
904             fjptrD             = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
905
906             gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA+DIM,fjptrB+DIM,fjptrC+DIM,fjptrD+DIM,
907                                                    fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
908
909             /* Inner loop uses 252 flops */
910         }
911
912         /* End of innermost loop */
913
914         gmx_mm_update_iforce_3atom_swizzle_ps(fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
915                                               f+i_coord_offset+DIM,fshift+i_shift_offset);
916
917         ggid                        = gid[iidx];
918         /* Update potential energies */
919         gmx_mm_update_1pot_ps(velecsum,kernel_data->energygrp_elec+ggid);
920
921         /* Increment number of inner iterations */
922         inneriter                  += j_index_end - j_index_start;
923
924         /* Outer loop uses 19 flops */
925     }
926
927     /* Increment number of outer iterations */
928     outeriter        += nri;
929
930     /* Update outer/inner flops */
931
932     inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W4W4_VF,outeriter*19 + inneriter*252);
933 }
934 /*
935  * Gromacs nonbonded kernel:   nb_kernel_ElecCoul_VdwNone_GeomW4W4_F_sse4_1_single
936  * Electrostatics interaction: Coulomb
937  * VdW interaction:            None
938  * Geometry:                   Water4-Water4
939  * Calculate force/pot:        Force
940  */
941 void
942 nb_kernel_ElecCoul_VdwNone_GeomW4W4_F_sse4_1_single
943                     (t_nblist                    * gmx_restrict       nlist,
944                      rvec                        * gmx_restrict          xx,
945                      rvec                        * gmx_restrict          ff,
946                      t_forcerec                  * gmx_restrict          fr,
947                      t_mdatoms                   * gmx_restrict     mdatoms,
948                      nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
949                      t_nrnb                      * gmx_restrict        nrnb)
950 {
951     /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or 
952      * just 0 for non-waters.
953      * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
954      * jnr indices corresponding to data put in the four positions in the SIMD register.
955      */
956     int              i_shift_offset,i_coord_offset,outeriter,inneriter;
957     int              j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
958     int              jnrA,jnrB,jnrC,jnrD;
959     int              jnrlistA,jnrlistB,jnrlistC,jnrlistD;
960     int              j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
961     int              *iinr,*jindex,*jjnr,*shiftidx,*gid;
962     real             rcutoff_scalar;
963     real             *shiftvec,*fshift,*x,*f;
964     real             *fjptrA,*fjptrB,*fjptrC,*fjptrD;
965     real             scratch[4*DIM];
966     __m128           tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
967     int              vdwioffset1;
968     __m128           ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
969     int              vdwioffset2;
970     __m128           ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
971     int              vdwioffset3;
972     __m128           ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
973     int              vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
974     __m128           jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
975     int              vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
976     __m128           jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
977     int              vdwjidx3A,vdwjidx3B,vdwjidx3C,vdwjidx3D;
978     __m128           jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
979     __m128           dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
980     __m128           dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
981     __m128           dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
982     __m128           dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
983     __m128           dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
984     __m128           dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
985     __m128           dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
986     __m128           dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
987     __m128           dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
988     __m128           velec,felec,velecsum,facel,crf,krf,krf2;
989     real             *charge;
990     __m128           dummy_mask,cutoff_mask;
991     __m128           signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
992     __m128           one     = _mm_set1_ps(1.0);
993     __m128           two     = _mm_set1_ps(2.0);
994     x                = xx[0];
995     f                = ff[0];
996
997     nri              = nlist->nri;
998     iinr             = nlist->iinr;
999     jindex           = nlist->jindex;
1000     jjnr             = nlist->jjnr;
1001     shiftidx         = nlist->shift;
1002     gid              = nlist->gid;
1003     shiftvec         = fr->shift_vec[0];
1004     fshift           = fr->fshift[0];
1005     facel            = _mm_set1_ps(fr->epsfac);
1006     charge           = mdatoms->chargeA;
1007
1008     /* Setup water-specific parameters */
1009     inr              = nlist->iinr[0];
1010     iq1              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
1011     iq2              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
1012     iq3              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+3]));
1013
1014     jq1              = _mm_set1_ps(charge[inr+1]);
1015     jq2              = _mm_set1_ps(charge[inr+2]);
1016     jq3              = _mm_set1_ps(charge[inr+3]);
1017     qq11             = _mm_mul_ps(iq1,jq1);
1018     qq12             = _mm_mul_ps(iq1,jq2);
1019     qq13             = _mm_mul_ps(iq1,jq3);
1020     qq21             = _mm_mul_ps(iq2,jq1);
1021     qq22             = _mm_mul_ps(iq2,jq2);
1022     qq23             = _mm_mul_ps(iq2,jq3);
1023     qq31             = _mm_mul_ps(iq3,jq1);
1024     qq32             = _mm_mul_ps(iq3,jq2);
1025     qq33             = _mm_mul_ps(iq3,jq3);
1026
1027     /* Avoid stupid compiler warnings */
1028     jnrA = jnrB = jnrC = jnrD = 0;
1029     j_coord_offsetA = 0;
1030     j_coord_offsetB = 0;
1031     j_coord_offsetC = 0;
1032     j_coord_offsetD = 0;
1033
1034     outeriter        = 0;
1035     inneriter        = 0;
1036
1037     for(iidx=0;iidx<4*DIM;iidx++)
1038     {
1039         scratch[iidx] = 0.0;
1040     }
1041
1042     /* Start outer loop over neighborlists */
1043     for(iidx=0; iidx<nri; iidx++)
1044     {
1045         /* Load shift vector for this list */
1046         i_shift_offset   = DIM*shiftidx[iidx];
1047
1048         /* Load limits for loop over neighbors */
1049         j_index_start    = jindex[iidx];
1050         j_index_end      = jindex[iidx+1];
1051
1052         /* Get outer coordinate index */
1053         inr              = iinr[iidx];
1054         i_coord_offset   = DIM*inr;
1055
1056         /* Load i particle coords and add shift vector */
1057         gmx_mm_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset+DIM,
1058                                                  &ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
1059
1060         fix1             = _mm_setzero_ps();
1061         fiy1             = _mm_setzero_ps();
1062         fiz1             = _mm_setzero_ps();
1063         fix2             = _mm_setzero_ps();
1064         fiy2             = _mm_setzero_ps();
1065         fiz2             = _mm_setzero_ps();
1066         fix3             = _mm_setzero_ps();
1067         fiy3             = _mm_setzero_ps();
1068         fiz3             = _mm_setzero_ps();
1069
1070         /* Start inner kernel loop */
1071         for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
1072         {
1073
1074             /* Get j neighbor index, and coordinate index */
1075             jnrA             = jjnr[jidx];
1076             jnrB             = jjnr[jidx+1];
1077             jnrC             = jjnr[jidx+2];
1078             jnrD             = jjnr[jidx+3];
1079             j_coord_offsetA  = DIM*jnrA;
1080             j_coord_offsetB  = DIM*jnrB;
1081             j_coord_offsetC  = DIM*jnrC;
1082             j_coord_offsetD  = DIM*jnrD;
1083
1084             /* load j atom coordinates */
1085             gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
1086                                               x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
1087                                               &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
1088
1089             /* Calculate displacement vector */
1090             dx11             = _mm_sub_ps(ix1,jx1);
1091             dy11             = _mm_sub_ps(iy1,jy1);
1092             dz11             = _mm_sub_ps(iz1,jz1);
1093             dx12             = _mm_sub_ps(ix1,jx2);
1094             dy12             = _mm_sub_ps(iy1,jy2);
1095             dz12             = _mm_sub_ps(iz1,jz2);
1096             dx13             = _mm_sub_ps(ix1,jx3);
1097             dy13             = _mm_sub_ps(iy1,jy3);
1098             dz13             = _mm_sub_ps(iz1,jz3);
1099             dx21             = _mm_sub_ps(ix2,jx1);
1100             dy21             = _mm_sub_ps(iy2,jy1);
1101             dz21             = _mm_sub_ps(iz2,jz1);
1102             dx22             = _mm_sub_ps(ix2,jx2);
1103             dy22             = _mm_sub_ps(iy2,jy2);
1104             dz22             = _mm_sub_ps(iz2,jz2);
1105             dx23             = _mm_sub_ps(ix2,jx3);
1106             dy23             = _mm_sub_ps(iy2,jy3);
1107             dz23             = _mm_sub_ps(iz2,jz3);
1108             dx31             = _mm_sub_ps(ix3,jx1);
1109             dy31             = _mm_sub_ps(iy3,jy1);
1110             dz31             = _mm_sub_ps(iz3,jz1);
1111             dx32             = _mm_sub_ps(ix3,jx2);
1112             dy32             = _mm_sub_ps(iy3,jy2);
1113             dz32             = _mm_sub_ps(iz3,jz2);
1114             dx33             = _mm_sub_ps(ix3,jx3);
1115             dy33             = _mm_sub_ps(iy3,jy3);
1116             dz33             = _mm_sub_ps(iz3,jz3);
1117
1118             /* Calculate squared distance and things based on it */
1119             rsq11            = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1120             rsq12            = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1121             rsq13            = gmx_mm_calc_rsq_ps(dx13,dy13,dz13);
1122             rsq21            = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1123             rsq22            = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1124             rsq23            = gmx_mm_calc_rsq_ps(dx23,dy23,dz23);
1125             rsq31            = gmx_mm_calc_rsq_ps(dx31,dy31,dz31);
1126             rsq32            = gmx_mm_calc_rsq_ps(dx32,dy32,dz32);
1127             rsq33            = gmx_mm_calc_rsq_ps(dx33,dy33,dz33);
1128
1129             rinv11           = gmx_mm_invsqrt_ps(rsq11);
1130             rinv12           = gmx_mm_invsqrt_ps(rsq12);
1131             rinv13           = gmx_mm_invsqrt_ps(rsq13);
1132             rinv21           = gmx_mm_invsqrt_ps(rsq21);
1133             rinv22           = gmx_mm_invsqrt_ps(rsq22);
1134             rinv23           = gmx_mm_invsqrt_ps(rsq23);
1135             rinv31           = gmx_mm_invsqrt_ps(rsq31);
1136             rinv32           = gmx_mm_invsqrt_ps(rsq32);
1137             rinv33           = gmx_mm_invsqrt_ps(rsq33);
1138
1139             rinvsq11         = _mm_mul_ps(rinv11,rinv11);
1140             rinvsq12         = _mm_mul_ps(rinv12,rinv12);
1141             rinvsq13         = _mm_mul_ps(rinv13,rinv13);
1142             rinvsq21         = _mm_mul_ps(rinv21,rinv21);
1143             rinvsq22         = _mm_mul_ps(rinv22,rinv22);
1144             rinvsq23         = _mm_mul_ps(rinv23,rinv23);
1145             rinvsq31         = _mm_mul_ps(rinv31,rinv31);
1146             rinvsq32         = _mm_mul_ps(rinv32,rinv32);
1147             rinvsq33         = _mm_mul_ps(rinv33,rinv33);
1148
1149             fjx1             = _mm_setzero_ps();
1150             fjy1             = _mm_setzero_ps();
1151             fjz1             = _mm_setzero_ps();
1152             fjx2             = _mm_setzero_ps();
1153             fjy2             = _mm_setzero_ps();
1154             fjz2             = _mm_setzero_ps();
1155             fjx3             = _mm_setzero_ps();
1156             fjy3             = _mm_setzero_ps();
1157             fjz3             = _mm_setzero_ps();
1158
1159             /**************************
1160              * CALCULATE INTERACTIONS *
1161              **************************/
1162
1163             /* COULOMB ELECTROSTATICS */
1164             velec            = _mm_mul_ps(qq11,rinv11);
1165             felec            = _mm_mul_ps(velec,rinvsq11);
1166
1167             fscal            = felec;
1168
1169             /* Calculate temporary vectorial force */
1170             tx               = _mm_mul_ps(fscal,dx11);
1171             ty               = _mm_mul_ps(fscal,dy11);
1172             tz               = _mm_mul_ps(fscal,dz11);
1173
1174             /* Update vectorial force */
1175             fix1             = _mm_add_ps(fix1,tx);
1176             fiy1             = _mm_add_ps(fiy1,ty);
1177             fiz1             = _mm_add_ps(fiz1,tz);
1178
1179             fjx1             = _mm_add_ps(fjx1,tx);
1180             fjy1             = _mm_add_ps(fjy1,ty);
1181             fjz1             = _mm_add_ps(fjz1,tz);
1182
1183             /**************************
1184              * CALCULATE INTERACTIONS *
1185              **************************/
1186
1187             /* COULOMB ELECTROSTATICS */
1188             velec            = _mm_mul_ps(qq12,rinv12);
1189             felec            = _mm_mul_ps(velec,rinvsq12);
1190
1191             fscal            = felec;
1192
1193             /* Calculate temporary vectorial force */
1194             tx               = _mm_mul_ps(fscal,dx12);
1195             ty               = _mm_mul_ps(fscal,dy12);
1196             tz               = _mm_mul_ps(fscal,dz12);
1197
1198             /* Update vectorial force */
1199             fix1             = _mm_add_ps(fix1,tx);
1200             fiy1             = _mm_add_ps(fiy1,ty);
1201             fiz1             = _mm_add_ps(fiz1,tz);
1202
1203             fjx2             = _mm_add_ps(fjx2,tx);
1204             fjy2             = _mm_add_ps(fjy2,ty);
1205             fjz2             = _mm_add_ps(fjz2,tz);
1206
1207             /**************************
1208              * CALCULATE INTERACTIONS *
1209              **************************/
1210
1211             /* COULOMB ELECTROSTATICS */
1212             velec            = _mm_mul_ps(qq13,rinv13);
1213             felec            = _mm_mul_ps(velec,rinvsq13);
1214
1215             fscal            = felec;
1216
1217             /* Calculate temporary vectorial force */
1218             tx               = _mm_mul_ps(fscal,dx13);
1219             ty               = _mm_mul_ps(fscal,dy13);
1220             tz               = _mm_mul_ps(fscal,dz13);
1221
1222             /* Update vectorial force */
1223             fix1             = _mm_add_ps(fix1,tx);
1224             fiy1             = _mm_add_ps(fiy1,ty);
1225             fiz1             = _mm_add_ps(fiz1,tz);
1226
1227             fjx3             = _mm_add_ps(fjx3,tx);
1228             fjy3             = _mm_add_ps(fjy3,ty);
1229             fjz3             = _mm_add_ps(fjz3,tz);
1230
1231             /**************************
1232              * CALCULATE INTERACTIONS *
1233              **************************/
1234
1235             /* COULOMB ELECTROSTATICS */
1236             velec            = _mm_mul_ps(qq21,rinv21);
1237             felec            = _mm_mul_ps(velec,rinvsq21);
1238
1239             fscal            = felec;
1240
1241             /* Calculate temporary vectorial force */
1242             tx               = _mm_mul_ps(fscal,dx21);
1243             ty               = _mm_mul_ps(fscal,dy21);
1244             tz               = _mm_mul_ps(fscal,dz21);
1245
1246             /* Update vectorial force */
1247             fix2             = _mm_add_ps(fix2,tx);
1248             fiy2             = _mm_add_ps(fiy2,ty);
1249             fiz2             = _mm_add_ps(fiz2,tz);
1250
1251             fjx1             = _mm_add_ps(fjx1,tx);
1252             fjy1             = _mm_add_ps(fjy1,ty);
1253             fjz1             = _mm_add_ps(fjz1,tz);
1254
1255             /**************************
1256              * CALCULATE INTERACTIONS *
1257              **************************/
1258
1259             /* COULOMB ELECTROSTATICS */
1260             velec            = _mm_mul_ps(qq22,rinv22);
1261             felec            = _mm_mul_ps(velec,rinvsq22);
1262
1263             fscal            = felec;
1264
1265             /* Calculate temporary vectorial force */
1266             tx               = _mm_mul_ps(fscal,dx22);
1267             ty               = _mm_mul_ps(fscal,dy22);
1268             tz               = _mm_mul_ps(fscal,dz22);
1269
1270             /* Update vectorial force */
1271             fix2             = _mm_add_ps(fix2,tx);
1272             fiy2             = _mm_add_ps(fiy2,ty);
1273             fiz2             = _mm_add_ps(fiz2,tz);
1274
1275             fjx2             = _mm_add_ps(fjx2,tx);
1276             fjy2             = _mm_add_ps(fjy2,ty);
1277             fjz2             = _mm_add_ps(fjz2,tz);
1278
1279             /**************************
1280              * CALCULATE INTERACTIONS *
1281              **************************/
1282
1283             /* COULOMB ELECTROSTATICS */
1284             velec            = _mm_mul_ps(qq23,rinv23);
1285             felec            = _mm_mul_ps(velec,rinvsq23);
1286
1287             fscal            = felec;
1288
1289             /* Calculate temporary vectorial force */
1290             tx               = _mm_mul_ps(fscal,dx23);
1291             ty               = _mm_mul_ps(fscal,dy23);
1292             tz               = _mm_mul_ps(fscal,dz23);
1293
1294             /* Update vectorial force */
1295             fix2             = _mm_add_ps(fix2,tx);
1296             fiy2             = _mm_add_ps(fiy2,ty);
1297             fiz2             = _mm_add_ps(fiz2,tz);
1298
1299             fjx3             = _mm_add_ps(fjx3,tx);
1300             fjy3             = _mm_add_ps(fjy3,ty);
1301             fjz3             = _mm_add_ps(fjz3,tz);
1302
1303             /**************************
1304              * CALCULATE INTERACTIONS *
1305              **************************/
1306
1307             /* COULOMB ELECTROSTATICS */
1308             velec            = _mm_mul_ps(qq31,rinv31);
1309             felec            = _mm_mul_ps(velec,rinvsq31);
1310
1311             fscal            = felec;
1312
1313             /* Calculate temporary vectorial force */
1314             tx               = _mm_mul_ps(fscal,dx31);
1315             ty               = _mm_mul_ps(fscal,dy31);
1316             tz               = _mm_mul_ps(fscal,dz31);
1317
1318             /* Update vectorial force */
1319             fix3             = _mm_add_ps(fix3,tx);
1320             fiy3             = _mm_add_ps(fiy3,ty);
1321             fiz3             = _mm_add_ps(fiz3,tz);
1322
1323             fjx1             = _mm_add_ps(fjx1,tx);
1324             fjy1             = _mm_add_ps(fjy1,ty);
1325             fjz1             = _mm_add_ps(fjz1,tz);
1326
1327             /**************************
1328              * CALCULATE INTERACTIONS *
1329              **************************/
1330
1331             /* COULOMB ELECTROSTATICS */
1332             velec            = _mm_mul_ps(qq32,rinv32);
1333             felec            = _mm_mul_ps(velec,rinvsq32);
1334
1335             fscal            = felec;
1336
1337             /* Calculate temporary vectorial force */
1338             tx               = _mm_mul_ps(fscal,dx32);
1339             ty               = _mm_mul_ps(fscal,dy32);
1340             tz               = _mm_mul_ps(fscal,dz32);
1341
1342             /* Update vectorial force */
1343             fix3             = _mm_add_ps(fix3,tx);
1344             fiy3             = _mm_add_ps(fiy3,ty);
1345             fiz3             = _mm_add_ps(fiz3,tz);
1346
1347             fjx2             = _mm_add_ps(fjx2,tx);
1348             fjy2             = _mm_add_ps(fjy2,ty);
1349             fjz2             = _mm_add_ps(fjz2,tz);
1350
1351             /**************************
1352              * CALCULATE INTERACTIONS *
1353              **************************/
1354
1355             /* COULOMB ELECTROSTATICS */
1356             velec            = _mm_mul_ps(qq33,rinv33);
1357             felec            = _mm_mul_ps(velec,rinvsq33);
1358
1359             fscal            = felec;
1360
1361             /* Calculate temporary vectorial force */
1362             tx               = _mm_mul_ps(fscal,dx33);
1363             ty               = _mm_mul_ps(fscal,dy33);
1364             tz               = _mm_mul_ps(fscal,dz33);
1365
1366             /* Update vectorial force */
1367             fix3             = _mm_add_ps(fix3,tx);
1368             fiy3             = _mm_add_ps(fiy3,ty);
1369             fiz3             = _mm_add_ps(fiz3,tz);
1370
1371             fjx3             = _mm_add_ps(fjx3,tx);
1372             fjy3             = _mm_add_ps(fjy3,ty);
1373             fjz3             = _mm_add_ps(fjz3,tz);
1374
1375             fjptrA             = f+j_coord_offsetA;
1376             fjptrB             = f+j_coord_offsetB;
1377             fjptrC             = f+j_coord_offsetC;
1378             fjptrD             = f+j_coord_offsetD;
1379
1380             gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA+DIM,fjptrB+DIM,fjptrC+DIM,fjptrD+DIM,
1381                                                    fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
1382
1383             /* Inner loop uses 243 flops */
1384         }
1385
1386         if(jidx<j_index_end)
1387         {
1388
1389             /* Get j neighbor index, and coordinate index */
1390             jnrlistA         = jjnr[jidx];
1391             jnrlistB         = jjnr[jidx+1];
1392             jnrlistC         = jjnr[jidx+2];
1393             jnrlistD         = jjnr[jidx+3];
1394             /* Sign of each element will be negative for non-real atoms.
1395              * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
1396              * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
1397              */
1398             dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
1399             jnrA       = (jnrlistA>=0) ? jnrlistA : 0;
1400             jnrB       = (jnrlistB>=0) ? jnrlistB : 0;
1401             jnrC       = (jnrlistC>=0) ? jnrlistC : 0;
1402             jnrD       = (jnrlistD>=0) ? jnrlistD : 0;
1403             j_coord_offsetA  = DIM*jnrA;
1404             j_coord_offsetB  = DIM*jnrB;
1405             j_coord_offsetC  = DIM*jnrC;
1406             j_coord_offsetD  = DIM*jnrD;
1407
1408             /* load j atom coordinates */
1409             gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
1410                                               x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
1411                                               &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
1412
1413             /* Calculate displacement vector */
1414             dx11             = _mm_sub_ps(ix1,jx1);
1415             dy11             = _mm_sub_ps(iy1,jy1);
1416             dz11             = _mm_sub_ps(iz1,jz1);
1417             dx12             = _mm_sub_ps(ix1,jx2);
1418             dy12             = _mm_sub_ps(iy1,jy2);
1419             dz12             = _mm_sub_ps(iz1,jz2);
1420             dx13             = _mm_sub_ps(ix1,jx3);
1421             dy13             = _mm_sub_ps(iy1,jy3);
1422             dz13             = _mm_sub_ps(iz1,jz3);
1423             dx21             = _mm_sub_ps(ix2,jx1);
1424             dy21             = _mm_sub_ps(iy2,jy1);
1425             dz21             = _mm_sub_ps(iz2,jz1);
1426             dx22             = _mm_sub_ps(ix2,jx2);
1427             dy22             = _mm_sub_ps(iy2,jy2);
1428             dz22             = _mm_sub_ps(iz2,jz2);
1429             dx23             = _mm_sub_ps(ix2,jx3);
1430             dy23             = _mm_sub_ps(iy2,jy3);
1431             dz23             = _mm_sub_ps(iz2,jz3);
1432             dx31             = _mm_sub_ps(ix3,jx1);
1433             dy31             = _mm_sub_ps(iy3,jy1);
1434             dz31             = _mm_sub_ps(iz3,jz1);
1435             dx32             = _mm_sub_ps(ix3,jx2);
1436             dy32             = _mm_sub_ps(iy3,jy2);
1437             dz32             = _mm_sub_ps(iz3,jz2);
1438             dx33             = _mm_sub_ps(ix3,jx3);
1439             dy33             = _mm_sub_ps(iy3,jy3);
1440             dz33             = _mm_sub_ps(iz3,jz3);
1441
1442             /* Calculate squared distance and things based on it */
1443             rsq11            = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1444             rsq12            = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1445             rsq13            = gmx_mm_calc_rsq_ps(dx13,dy13,dz13);
1446             rsq21            = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1447             rsq22            = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1448             rsq23            = gmx_mm_calc_rsq_ps(dx23,dy23,dz23);
1449             rsq31            = gmx_mm_calc_rsq_ps(dx31,dy31,dz31);
1450             rsq32            = gmx_mm_calc_rsq_ps(dx32,dy32,dz32);
1451             rsq33            = gmx_mm_calc_rsq_ps(dx33,dy33,dz33);
1452
1453             rinv11           = gmx_mm_invsqrt_ps(rsq11);
1454             rinv12           = gmx_mm_invsqrt_ps(rsq12);
1455             rinv13           = gmx_mm_invsqrt_ps(rsq13);
1456             rinv21           = gmx_mm_invsqrt_ps(rsq21);
1457             rinv22           = gmx_mm_invsqrt_ps(rsq22);
1458             rinv23           = gmx_mm_invsqrt_ps(rsq23);
1459             rinv31           = gmx_mm_invsqrt_ps(rsq31);
1460             rinv32           = gmx_mm_invsqrt_ps(rsq32);
1461             rinv33           = gmx_mm_invsqrt_ps(rsq33);
1462
1463             rinvsq11         = _mm_mul_ps(rinv11,rinv11);
1464             rinvsq12         = _mm_mul_ps(rinv12,rinv12);
1465             rinvsq13         = _mm_mul_ps(rinv13,rinv13);
1466             rinvsq21         = _mm_mul_ps(rinv21,rinv21);
1467             rinvsq22         = _mm_mul_ps(rinv22,rinv22);
1468             rinvsq23         = _mm_mul_ps(rinv23,rinv23);
1469             rinvsq31         = _mm_mul_ps(rinv31,rinv31);
1470             rinvsq32         = _mm_mul_ps(rinv32,rinv32);
1471             rinvsq33         = _mm_mul_ps(rinv33,rinv33);
1472
1473             fjx1             = _mm_setzero_ps();
1474             fjy1             = _mm_setzero_ps();
1475             fjz1             = _mm_setzero_ps();
1476             fjx2             = _mm_setzero_ps();
1477             fjy2             = _mm_setzero_ps();
1478             fjz2             = _mm_setzero_ps();
1479             fjx3             = _mm_setzero_ps();
1480             fjy3             = _mm_setzero_ps();
1481             fjz3             = _mm_setzero_ps();
1482
1483             /**************************
1484              * CALCULATE INTERACTIONS *
1485              **************************/
1486
1487             /* COULOMB ELECTROSTATICS */
1488             velec            = _mm_mul_ps(qq11,rinv11);
1489             felec            = _mm_mul_ps(velec,rinvsq11);
1490
1491             fscal            = felec;
1492
1493             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1494
1495             /* Calculate temporary vectorial force */
1496             tx               = _mm_mul_ps(fscal,dx11);
1497             ty               = _mm_mul_ps(fscal,dy11);
1498             tz               = _mm_mul_ps(fscal,dz11);
1499
1500             /* Update vectorial force */
1501             fix1             = _mm_add_ps(fix1,tx);
1502             fiy1             = _mm_add_ps(fiy1,ty);
1503             fiz1             = _mm_add_ps(fiz1,tz);
1504
1505             fjx1             = _mm_add_ps(fjx1,tx);
1506             fjy1             = _mm_add_ps(fjy1,ty);
1507             fjz1             = _mm_add_ps(fjz1,tz);
1508
1509             /**************************
1510              * CALCULATE INTERACTIONS *
1511              **************************/
1512
1513             /* COULOMB ELECTROSTATICS */
1514             velec            = _mm_mul_ps(qq12,rinv12);
1515             felec            = _mm_mul_ps(velec,rinvsq12);
1516
1517             fscal            = felec;
1518
1519             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1520
1521             /* Calculate temporary vectorial force */
1522             tx               = _mm_mul_ps(fscal,dx12);
1523             ty               = _mm_mul_ps(fscal,dy12);
1524             tz               = _mm_mul_ps(fscal,dz12);
1525
1526             /* Update vectorial force */
1527             fix1             = _mm_add_ps(fix1,tx);
1528             fiy1             = _mm_add_ps(fiy1,ty);
1529             fiz1             = _mm_add_ps(fiz1,tz);
1530
1531             fjx2             = _mm_add_ps(fjx2,tx);
1532             fjy2             = _mm_add_ps(fjy2,ty);
1533             fjz2             = _mm_add_ps(fjz2,tz);
1534
1535             /**************************
1536              * CALCULATE INTERACTIONS *
1537              **************************/
1538
1539             /* COULOMB ELECTROSTATICS */
1540             velec            = _mm_mul_ps(qq13,rinv13);
1541             felec            = _mm_mul_ps(velec,rinvsq13);
1542
1543             fscal            = felec;
1544
1545             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1546
1547             /* Calculate temporary vectorial force */
1548             tx               = _mm_mul_ps(fscal,dx13);
1549             ty               = _mm_mul_ps(fscal,dy13);
1550             tz               = _mm_mul_ps(fscal,dz13);
1551
1552             /* Update vectorial force */
1553             fix1             = _mm_add_ps(fix1,tx);
1554             fiy1             = _mm_add_ps(fiy1,ty);
1555             fiz1             = _mm_add_ps(fiz1,tz);
1556
1557             fjx3             = _mm_add_ps(fjx3,tx);
1558             fjy3             = _mm_add_ps(fjy3,ty);
1559             fjz3             = _mm_add_ps(fjz3,tz);
1560
1561             /**************************
1562              * CALCULATE INTERACTIONS *
1563              **************************/
1564
1565             /* COULOMB ELECTROSTATICS */
1566             velec            = _mm_mul_ps(qq21,rinv21);
1567             felec            = _mm_mul_ps(velec,rinvsq21);
1568
1569             fscal            = felec;
1570
1571             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1572
1573             /* Calculate temporary vectorial force */
1574             tx               = _mm_mul_ps(fscal,dx21);
1575             ty               = _mm_mul_ps(fscal,dy21);
1576             tz               = _mm_mul_ps(fscal,dz21);
1577
1578             /* Update vectorial force */
1579             fix2             = _mm_add_ps(fix2,tx);
1580             fiy2             = _mm_add_ps(fiy2,ty);
1581             fiz2             = _mm_add_ps(fiz2,tz);
1582
1583             fjx1             = _mm_add_ps(fjx1,tx);
1584             fjy1             = _mm_add_ps(fjy1,ty);
1585             fjz1             = _mm_add_ps(fjz1,tz);
1586
1587             /**************************
1588              * CALCULATE INTERACTIONS *
1589              **************************/
1590
1591             /* COULOMB ELECTROSTATICS */
1592             velec            = _mm_mul_ps(qq22,rinv22);
1593             felec            = _mm_mul_ps(velec,rinvsq22);
1594
1595             fscal            = felec;
1596
1597             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1598
1599             /* Calculate temporary vectorial force */
1600             tx               = _mm_mul_ps(fscal,dx22);
1601             ty               = _mm_mul_ps(fscal,dy22);
1602             tz               = _mm_mul_ps(fscal,dz22);
1603
1604             /* Update vectorial force */
1605             fix2             = _mm_add_ps(fix2,tx);
1606             fiy2             = _mm_add_ps(fiy2,ty);
1607             fiz2             = _mm_add_ps(fiz2,tz);
1608
1609             fjx2             = _mm_add_ps(fjx2,tx);
1610             fjy2             = _mm_add_ps(fjy2,ty);
1611             fjz2             = _mm_add_ps(fjz2,tz);
1612
1613             /**************************
1614              * CALCULATE INTERACTIONS *
1615              **************************/
1616
1617             /* COULOMB ELECTROSTATICS */
1618             velec            = _mm_mul_ps(qq23,rinv23);
1619             felec            = _mm_mul_ps(velec,rinvsq23);
1620
1621             fscal            = felec;
1622
1623             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1624
1625             /* Calculate temporary vectorial force */
1626             tx               = _mm_mul_ps(fscal,dx23);
1627             ty               = _mm_mul_ps(fscal,dy23);
1628             tz               = _mm_mul_ps(fscal,dz23);
1629
1630             /* Update vectorial force */
1631             fix2             = _mm_add_ps(fix2,tx);
1632             fiy2             = _mm_add_ps(fiy2,ty);
1633             fiz2             = _mm_add_ps(fiz2,tz);
1634
1635             fjx3             = _mm_add_ps(fjx3,tx);
1636             fjy3             = _mm_add_ps(fjy3,ty);
1637             fjz3             = _mm_add_ps(fjz3,tz);
1638
1639             /**************************
1640              * CALCULATE INTERACTIONS *
1641              **************************/
1642
1643             /* COULOMB ELECTROSTATICS */
1644             velec            = _mm_mul_ps(qq31,rinv31);
1645             felec            = _mm_mul_ps(velec,rinvsq31);
1646
1647             fscal            = felec;
1648
1649             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1650
1651             /* Calculate temporary vectorial force */
1652             tx               = _mm_mul_ps(fscal,dx31);
1653             ty               = _mm_mul_ps(fscal,dy31);
1654             tz               = _mm_mul_ps(fscal,dz31);
1655
1656             /* Update vectorial force */
1657             fix3             = _mm_add_ps(fix3,tx);
1658             fiy3             = _mm_add_ps(fiy3,ty);
1659             fiz3             = _mm_add_ps(fiz3,tz);
1660
1661             fjx1             = _mm_add_ps(fjx1,tx);
1662             fjy1             = _mm_add_ps(fjy1,ty);
1663             fjz1             = _mm_add_ps(fjz1,tz);
1664
1665             /**************************
1666              * CALCULATE INTERACTIONS *
1667              **************************/
1668
1669             /* COULOMB ELECTROSTATICS */
1670             velec            = _mm_mul_ps(qq32,rinv32);
1671             felec            = _mm_mul_ps(velec,rinvsq32);
1672
1673             fscal            = felec;
1674
1675             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1676
1677             /* Calculate temporary vectorial force */
1678             tx               = _mm_mul_ps(fscal,dx32);
1679             ty               = _mm_mul_ps(fscal,dy32);
1680             tz               = _mm_mul_ps(fscal,dz32);
1681
1682             /* Update vectorial force */
1683             fix3             = _mm_add_ps(fix3,tx);
1684             fiy3             = _mm_add_ps(fiy3,ty);
1685             fiz3             = _mm_add_ps(fiz3,tz);
1686
1687             fjx2             = _mm_add_ps(fjx2,tx);
1688             fjy2             = _mm_add_ps(fjy2,ty);
1689             fjz2             = _mm_add_ps(fjz2,tz);
1690
1691             /**************************
1692              * CALCULATE INTERACTIONS *
1693              **************************/
1694
1695             /* COULOMB ELECTROSTATICS */
1696             velec            = _mm_mul_ps(qq33,rinv33);
1697             felec            = _mm_mul_ps(velec,rinvsq33);
1698
1699             fscal            = felec;
1700
1701             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1702
1703             /* Calculate temporary vectorial force */
1704             tx               = _mm_mul_ps(fscal,dx33);
1705             ty               = _mm_mul_ps(fscal,dy33);
1706             tz               = _mm_mul_ps(fscal,dz33);
1707
1708             /* Update vectorial force */
1709             fix3             = _mm_add_ps(fix3,tx);
1710             fiy3             = _mm_add_ps(fiy3,ty);
1711             fiz3             = _mm_add_ps(fiz3,tz);
1712
1713             fjx3             = _mm_add_ps(fjx3,tx);
1714             fjy3             = _mm_add_ps(fjy3,ty);
1715             fjz3             = _mm_add_ps(fjz3,tz);
1716
1717             fjptrA             = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
1718             fjptrB             = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
1719             fjptrC             = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
1720             fjptrD             = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
1721
1722             gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA+DIM,fjptrB+DIM,fjptrC+DIM,fjptrD+DIM,
1723                                                    fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
1724
1725             /* Inner loop uses 243 flops */
1726         }
1727
1728         /* End of innermost loop */
1729
1730         gmx_mm_update_iforce_3atom_swizzle_ps(fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
1731                                               f+i_coord_offset+DIM,fshift+i_shift_offset);
1732
1733         /* Increment number of inner iterations */
1734         inneriter                  += j_index_end - j_index_start;
1735
1736         /* Outer loop uses 18 flops */
1737     }
1738
1739     /* Increment number of outer iterations */
1740     outeriter        += nri;
1741
1742     /* Update outer/inner flops */
1743
1744     inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W4W4_F,outeriter*18 + inneriter*243);
1745 }