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36 * Note: this file was generated by the GROMACS sse4_1_double kernel generator.
44 #include "../nb_kernel.h"
45 #include "gromacs/gmxlib/nrnb.h"
47 #include "kernelutil_x86_sse4_1_double.h"
50 * Gromacs nonbonded kernel: nb_kernel_ElecRF_VdwCSTab_GeomW3W3_VF_sse4_1_double
51 * Electrostatics interaction: ReactionField
52 * VdW interaction: CubicSplineTable
53 * Geometry: Water3-Water3
54 * Calculate force/pot: PotentialAndForce
57 nb_kernel_ElecRF_VdwCSTab_GeomW3W3_VF_sse4_1_double
58 (t_nblist * gmx_restrict nlist,
59 rvec * gmx_restrict xx,
60 rvec * gmx_restrict ff,
61 struct t_forcerec * gmx_restrict fr,
62 t_mdatoms * gmx_restrict mdatoms,
63 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
64 t_nrnb * gmx_restrict nrnb)
66 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
67 * just 0 for non-waters.
68 * Suffixes A,B refer to j loop unrolling done with SSE double precision, e.g. for the two different
69 * jnr indices corresponding to data put in the four positions in the SIMD register.
71 int i_shift_offset,i_coord_offset,outeriter,inneriter;
72 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
74 int j_coord_offsetA,j_coord_offsetB;
75 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
77 real *shiftvec,*fshift,*x,*f;
78 __m128d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
80 __m128d ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
82 __m128d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
84 __m128d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
85 int vdwjidx0A,vdwjidx0B;
86 __m128d jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
87 int vdwjidx1A,vdwjidx1B;
88 __m128d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
89 int vdwjidx2A,vdwjidx2B;
90 __m128d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
91 __m128d dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
92 __m128d dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
93 __m128d dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
94 __m128d dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
95 __m128d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
96 __m128d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
97 __m128d dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
98 __m128d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
99 __m128d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
100 __m128d velec,felec,velecsum,facel,crf,krf,krf2;
103 __m128d rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
106 __m128d one_sixth = _mm_set1_pd(1.0/6.0);
107 __m128d one_twelfth = _mm_set1_pd(1.0/12.0);
109 __m128i ifour = _mm_set1_epi32(4);
110 __m128d rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
112 __m128d dummy_mask,cutoff_mask;
113 __m128d signbit = gmx_mm_castsi128_pd( _mm_set_epi32(0x80000000,0x00000000,0x80000000,0x00000000) );
114 __m128d one = _mm_set1_pd(1.0);
115 __m128d two = _mm_set1_pd(2.0);
121 jindex = nlist->jindex;
123 shiftidx = nlist->shift;
125 shiftvec = fr->shift_vec[0];
126 fshift = fr->fshift[0];
127 facel = _mm_set1_pd(fr->ic->epsfac);
128 charge = mdatoms->chargeA;
129 krf = _mm_set1_pd(fr->ic->k_rf);
130 krf2 = _mm_set1_pd(fr->ic->k_rf*2.0);
131 crf = _mm_set1_pd(fr->ic->c_rf);
132 nvdwtype = fr->ntype;
134 vdwtype = mdatoms->typeA;
136 vftab = kernel_data->table_vdw->data;
137 vftabscale = _mm_set1_pd(kernel_data->table_vdw->scale);
139 /* Setup water-specific parameters */
140 inr = nlist->iinr[0];
141 iq0 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+0]));
142 iq1 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+1]));
143 iq2 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+2]));
144 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
146 jq0 = _mm_set1_pd(charge[inr+0]);
147 jq1 = _mm_set1_pd(charge[inr+1]);
148 jq2 = _mm_set1_pd(charge[inr+2]);
149 vdwjidx0A = 2*vdwtype[inr+0];
150 qq00 = _mm_mul_pd(iq0,jq0);
151 c6_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A]);
152 c12_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A+1]);
153 qq01 = _mm_mul_pd(iq0,jq1);
154 qq02 = _mm_mul_pd(iq0,jq2);
155 qq10 = _mm_mul_pd(iq1,jq0);
156 qq11 = _mm_mul_pd(iq1,jq1);
157 qq12 = _mm_mul_pd(iq1,jq2);
158 qq20 = _mm_mul_pd(iq2,jq0);
159 qq21 = _mm_mul_pd(iq2,jq1);
160 qq22 = _mm_mul_pd(iq2,jq2);
162 /* Avoid stupid compiler warnings */
170 /* Start outer loop over neighborlists */
171 for(iidx=0; iidx<nri; iidx++)
173 /* Load shift vector for this list */
174 i_shift_offset = DIM*shiftidx[iidx];
176 /* Load limits for loop over neighbors */
177 j_index_start = jindex[iidx];
178 j_index_end = jindex[iidx+1];
180 /* Get outer coordinate index */
182 i_coord_offset = DIM*inr;
184 /* Load i particle coords and add shift vector */
185 gmx_mm_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset,
186 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
188 fix0 = _mm_setzero_pd();
189 fiy0 = _mm_setzero_pd();
190 fiz0 = _mm_setzero_pd();
191 fix1 = _mm_setzero_pd();
192 fiy1 = _mm_setzero_pd();
193 fiz1 = _mm_setzero_pd();
194 fix2 = _mm_setzero_pd();
195 fiy2 = _mm_setzero_pd();
196 fiz2 = _mm_setzero_pd();
198 /* Reset potential sums */
199 velecsum = _mm_setzero_pd();
200 vvdwsum = _mm_setzero_pd();
202 /* Start inner kernel loop */
203 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
206 /* Get j neighbor index, and coordinate index */
209 j_coord_offsetA = DIM*jnrA;
210 j_coord_offsetB = DIM*jnrB;
212 /* load j atom coordinates */
213 gmx_mm_load_3rvec_2ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
214 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
216 /* Calculate displacement vector */
217 dx00 = _mm_sub_pd(ix0,jx0);
218 dy00 = _mm_sub_pd(iy0,jy0);
219 dz00 = _mm_sub_pd(iz0,jz0);
220 dx01 = _mm_sub_pd(ix0,jx1);
221 dy01 = _mm_sub_pd(iy0,jy1);
222 dz01 = _mm_sub_pd(iz0,jz1);
223 dx02 = _mm_sub_pd(ix0,jx2);
224 dy02 = _mm_sub_pd(iy0,jy2);
225 dz02 = _mm_sub_pd(iz0,jz2);
226 dx10 = _mm_sub_pd(ix1,jx0);
227 dy10 = _mm_sub_pd(iy1,jy0);
228 dz10 = _mm_sub_pd(iz1,jz0);
229 dx11 = _mm_sub_pd(ix1,jx1);
230 dy11 = _mm_sub_pd(iy1,jy1);
231 dz11 = _mm_sub_pd(iz1,jz1);
232 dx12 = _mm_sub_pd(ix1,jx2);
233 dy12 = _mm_sub_pd(iy1,jy2);
234 dz12 = _mm_sub_pd(iz1,jz2);
235 dx20 = _mm_sub_pd(ix2,jx0);
236 dy20 = _mm_sub_pd(iy2,jy0);
237 dz20 = _mm_sub_pd(iz2,jz0);
238 dx21 = _mm_sub_pd(ix2,jx1);
239 dy21 = _mm_sub_pd(iy2,jy1);
240 dz21 = _mm_sub_pd(iz2,jz1);
241 dx22 = _mm_sub_pd(ix2,jx2);
242 dy22 = _mm_sub_pd(iy2,jy2);
243 dz22 = _mm_sub_pd(iz2,jz2);
245 /* Calculate squared distance and things based on it */
246 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
247 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
248 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
249 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
250 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
251 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
252 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
253 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
254 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
256 rinv00 = sse41_invsqrt_d(rsq00);
257 rinv01 = sse41_invsqrt_d(rsq01);
258 rinv02 = sse41_invsqrt_d(rsq02);
259 rinv10 = sse41_invsqrt_d(rsq10);
260 rinv11 = sse41_invsqrt_d(rsq11);
261 rinv12 = sse41_invsqrt_d(rsq12);
262 rinv20 = sse41_invsqrt_d(rsq20);
263 rinv21 = sse41_invsqrt_d(rsq21);
264 rinv22 = sse41_invsqrt_d(rsq22);
266 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
267 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
268 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
269 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
270 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
271 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
272 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
273 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
274 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
276 fjx0 = _mm_setzero_pd();
277 fjy0 = _mm_setzero_pd();
278 fjz0 = _mm_setzero_pd();
279 fjx1 = _mm_setzero_pd();
280 fjy1 = _mm_setzero_pd();
281 fjz1 = _mm_setzero_pd();
282 fjx2 = _mm_setzero_pd();
283 fjy2 = _mm_setzero_pd();
284 fjz2 = _mm_setzero_pd();
286 /**************************
287 * CALCULATE INTERACTIONS *
288 **************************/
290 r00 = _mm_mul_pd(rsq00,rinv00);
292 /* Calculate table index by multiplying r with table scale and truncate to integer */
293 rt = _mm_mul_pd(r00,vftabscale);
294 vfitab = _mm_cvttpd_epi32(rt);
295 vfeps = _mm_sub_pd(rt,_mm_round_pd(rt, _MM_FROUND_FLOOR));
296 vfitab = _mm_slli_epi32(vfitab,3);
298 /* REACTION-FIELD ELECTROSTATICS */
299 velec = _mm_mul_pd(qq00,_mm_sub_pd(_mm_add_pd(rinv00,_mm_mul_pd(krf,rsq00)),crf));
300 felec = _mm_mul_pd(qq00,_mm_sub_pd(_mm_mul_pd(rinv00,rinvsq00),krf2));
302 /* CUBIC SPLINE TABLE DISPERSION */
303 Y = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) );
304 F = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,1) );
305 GMX_MM_TRANSPOSE2_PD(Y,F);
306 G = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) +2);
307 H = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,1) +2);
308 GMX_MM_TRANSPOSE2_PD(G,H);
309 Heps = _mm_mul_pd(vfeps,H);
310 Fp = _mm_add_pd(F,_mm_mul_pd(vfeps,_mm_add_pd(G,Heps)));
311 VV = _mm_add_pd(Y,_mm_mul_pd(vfeps,Fp));
312 vvdw6 = _mm_mul_pd(c6_00,VV);
313 FF = _mm_add_pd(Fp,_mm_mul_pd(vfeps,_mm_add_pd(G,_mm_add_pd(Heps,Heps))));
314 fvdw6 = _mm_mul_pd(c6_00,FF);
316 /* CUBIC SPLINE TABLE REPULSION */
317 vfitab = _mm_add_epi32(vfitab,ifour);
318 Y = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) );
319 F = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,1) );
320 GMX_MM_TRANSPOSE2_PD(Y,F);
321 G = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) +2);
322 H = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,1) +2);
323 GMX_MM_TRANSPOSE2_PD(G,H);
324 Heps = _mm_mul_pd(vfeps,H);
325 Fp = _mm_add_pd(F,_mm_mul_pd(vfeps,_mm_add_pd(G,Heps)));
326 VV = _mm_add_pd(Y,_mm_mul_pd(vfeps,Fp));
327 vvdw12 = _mm_mul_pd(c12_00,VV);
328 FF = _mm_add_pd(Fp,_mm_mul_pd(vfeps,_mm_add_pd(G,_mm_add_pd(Heps,Heps))));
329 fvdw12 = _mm_mul_pd(c12_00,FF);
330 vvdw = _mm_add_pd(vvdw12,vvdw6);
331 fvdw = _mm_xor_pd(signbit,_mm_mul_pd(_mm_add_pd(fvdw6,fvdw12),_mm_mul_pd(vftabscale,rinv00)));
333 /* Update potential sum for this i atom from the interaction with this j atom. */
334 velecsum = _mm_add_pd(velecsum,velec);
335 vvdwsum = _mm_add_pd(vvdwsum,vvdw);
337 fscal = _mm_add_pd(felec,fvdw);
339 /* Calculate temporary vectorial force */
340 tx = _mm_mul_pd(fscal,dx00);
341 ty = _mm_mul_pd(fscal,dy00);
342 tz = _mm_mul_pd(fscal,dz00);
344 /* Update vectorial force */
345 fix0 = _mm_add_pd(fix0,tx);
346 fiy0 = _mm_add_pd(fiy0,ty);
347 fiz0 = _mm_add_pd(fiz0,tz);
349 fjx0 = _mm_add_pd(fjx0,tx);
350 fjy0 = _mm_add_pd(fjy0,ty);
351 fjz0 = _mm_add_pd(fjz0,tz);
353 /**************************
354 * CALCULATE INTERACTIONS *
355 **************************/
357 /* REACTION-FIELD ELECTROSTATICS */
358 velec = _mm_mul_pd(qq01,_mm_sub_pd(_mm_add_pd(rinv01,_mm_mul_pd(krf,rsq01)),crf));
359 felec = _mm_mul_pd(qq01,_mm_sub_pd(_mm_mul_pd(rinv01,rinvsq01),krf2));
361 /* Update potential sum for this i atom from the interaction with this j atom. */
362 velecsum = _mm_add_pd(velecsum,velec);
366 /* Calculate temporary vectorial force */
367 tx = _mm_mul_pd(fscal,dx01);
368 ty = _mm_mul_pd(fscal,dy01);
369 tz = _mm_mul_pd(fscal,dz01);
371 /* Update vectorial force */
372 fix0 = _mm_add_pd(fix0,tx);
373 fiy0 = _mm_add_pd(fiy0,ty);
374 fiz0 = _mm_add_pd(fiz0,tz);
376 fjx1 = _mm_add_pd(fjx1,tx);
377 fjy1 = _mm_add_pd(fjy1,ty);
378 fjz1 = _mm_add_pd(fjz1,tz);
380 /**************************
381 * CALCULATE INTERACTIONS *
382 **************************/
384 /* REACTION-FIELD ELECTROSTATICS */
385 velec = _mm_mul_pd(qq02,_mm_sub_pd(_mm_add_pd(rinv02,_mm_mul_pd(krf,rsq02)),crf));
386 felec = _mm_mul_pd(qq02,_mm_sub_pd(_mm_mul_pd(rinv02,rinvsq02),krf2));
388 /* Update potential sum for this i atom from the interaction with this j atom. */
389 velecsum = _mm_add_pd(velecsum,velec);
393 /* Calculate temporary vectorial force */
394 tx = _mm_mul_pd(fscal,dx02);
395 ty = _mm_mul_pd(fscal,dy02);
396 tz = _mm_mul_pd(fscal,dz02);
398 /* Update vectorial force */
399 fix0 = _mm_add_pd(fix0,tx);
400 fiy0 = _mm_add_pd(fiy0,ty);
401 fiz0 = _mm_add_pd(fiz0,tz);
403 fjx2 = _mm_add_pd(fjx2,tx);
404 fjy2 = _mm_add_pd(fjy2,ty);
405 fjz2 = _mm_add_pd(fjz2,tz);
407 /**************************
408 * CALCULATE INTERACTIONS *
409 **************************/
411 /* REACTION-FIELD ELECTROSTATICS */
412 velec = _mm_mul_pd(qq10,_mm_sub_pd(_mm_add_pd(rinv10,_mm_mul_pd(krf,rsq10)),crf));
413 felec = _mm_mul_pd(qq10,_mm_sub_pd(_mm_mul_pd(rinv10,rinvsq10),krf2));
415 /* Update potential sum for this i atom from the interaction with this j atom. */
416 velecsum = _mm_add_pd(velecsum,velec);
420 /* Calculate temporary vectorial force */
421 tx = _mm_mul_pd(fscal,dx10);
422 ty = _mm_mul_pd(fscal,dy10);
423 tz = _mm_mul_pd(fscal,dz10);
425 /* Update vectorial force */
426 fix1 = _mm_add_pd(fix1,tx);
427 fiy1 = _mm_add_pd(fiy1,ty);
428 fiz1 = _mm_add_pd(fiz1,tz);
430 fjx0 = _mm_add_pd(fjx0,tx);
431 fjy0 = _mm_add_pd(fjy0,ty);
432 fjz0 = _mm_add_pd(fjz0,tz);
434 /**************************
435 * CALCULATE INTERACTIONS *
436 **************************/
438 /* REACTION-FIELD ELECTROSTATICS */
439 velec = _mm_mul_pd(qq11,_mm_sub_pd(_mm_add_pd(rinv11,_mm_mul_pd(krf,rsq11)),crf));
440 felec = _mm_mul_pd(qq11,_mm_sub_pd(_mm_mul_pd(rinv11,rinvsq11),krf2));
442 /* Update potential sum for this i atom from the interaction with this j atom. */
443 velecsum = _mm_add_pd(velecsum,velec);
447 /* Calculate temporary vectorial force */
448 tx = _mm_mul_pd(fscal,dx11);
449 ty = _mm_mul_pd(fscal,dy11);
450 tz = _mm_mul_pd(fscal,dz11);
452 /* Update vectorial force */
453 fix1 = _mm_add_pd(fix1,tx);
454 fiy1 = _mm_add_pd(fiy1,ty);
455 fiz1 = _mm_add_pd(fiz1,tz);
457 fjx1 = _mm_add_pd(fjx1,tx);
458 fjy1 = _mm_add_pd(fjy1,ty);
459 fjz1 = _mm_add_pd(fjz1,tz);
461 /**************************
462 * CALCULATE INTERACTIONS *
463 **************************/
465 /* REACTION-FIELD ELECTROSTATICS */
466 velec = _mm_mul_pd(qq12,_mm_sub_pd(_mm_add_pd(rinv12,_mm_mul_pd(krf,rsq12)),crf));
467 felec = _mm_mul_pd(qq12,_mm_sub_pd(_mm_mul_pd(rinv12,rinvsq12),krf2));
469 /* Update potential sum for this i atom from the interaction with this j atom. */
470 velecsum = _mm_add_pd(velecsum,velec);
474 /* Calculate temporary vectorial force */
475 tx = _mm_mul_pd(fscal,dx12);
476 ty = _mm_mul_pd(fscal,dy12);
477 tz = _mm_mul_pd(fscal,dz12);
479 /* Update vectorial force */
480 fix1 = _mm_add_pd(fix1,tx);
481 fiy1 = _mm_add_pd(fiy1,ty);
482 fiz1 = _mm_add_pd(fiz1,tz);
484 fjx2 = _mm_add_pd(fjx2,tx);
485 fjy2 = _mm_add_pd(fjy2,ty);
486 fjz2 = _mm_add_pd(fjz2,tz);
488 /**************************
489 * CALCULATE INTERACTIONS *
490 **************************/
492 /* REACTION-FIELD ELECTROSTATICS */
493 velec = _mm_mul_pd(qq20,_mm_sub_pd(_mm_add_pd(rinv20,_mm_mul_pd(krf,rsq20)),crf));
494 felec = _mm_mul_pd(qq20,_mm_sub_pd(_mm_mul_pd(rinv20,rinvsq20),krf2));
496 /* Update potential sum for this i atom from the interaction with this j atom. */
497 velecsum = _mm_add_pd(velecsum,velec);
501 /* Calculate temporary vectorial force */
502 tx = _mm_mul_pd(fscal,dx20);
503 ty = _mm_mul_pd(fscal,dy20);
504 tz = _mm_mul_pd(fscal,dz20);
506 /* Update vectorial force */
507 fix2 = _mm_add_pd(fix2,tx);
508 fiy2 = _mm_add_pd(fiy2,ty);
509 fiz2 = _mm_add_pd(fiz2,tz);
511 fjx0 = _mm_add_pd(fjx0,tx);
512 fjy0 = _mm_add_pd(fjy0,ty);
513 fjz0 = _mm_add_pd(fjz0,tz);
515 /**************************
516 * CALCULATE INTERACTIONS *
517 **************************/
519 /* REACTION-FIELD ELECTROSTATICS */
520 velec = _mm_mul_pd(qq21,_mm_sub_pd(_mm_add_pd(rinv21,_mm_mul_pd(krf,rsq21)),crf));
521 felec = _mm_mul_pd(qq21,_mm_sub_pd(_mm_mul_pd(rinv21,rinvsq21),krf2));
523 /* Update potential sum for this i atom from the interaction with this j atom. */
524 velecsum = _mm_add_pd(velecsum,velec);
528 /* Calculate temporary vectorial force */
529 tx = _mm_mul_pd(fscal,dx21);
530 ty = _mm_mul_pd(fscal,dy21);
531 tz = _mm_mul_pd(fscal,dz21);
533 /* Update vectorial force */
534 fix2 = _mm_add_pd(fix2,tx);
535 fiy2 = _mm_add_pd(fiy2,ty);
536 fiz2 = _mm_add_pd(fiz2,tz);
538 fjx1 = _mm_add_pd(fjx1,tx);
539 fjy1 = _mm_add_pd(fjy1,ty);
540 fjz1 = _mm_add_pd(fjz1,tz);
542 /**************************
543 * CALCULATE INTERACTIONS *
544 **************************/
546 /* REACTION-FIELD ELECTROSTATICS */
547 velec = _mm_mul_pd(qq22,_mm_sub_pd(_mm_add_pd(rinv22,_mm_mul_pd(krf,rsq22)),crf));
548 felec = _mm_mul_pd(qq22,_mm_sub_pd(_mm_mul_pd(rinv22,rinvsq22),krf2));
550 /* Update potential sum for this i atom from the interaction with this j atom. */
551 velecsum = _mm_add_pd(velecsum,velec);
555 /* Calculate temporary vectorial force */
556 tx = _mm_mul_pd(fscal,dx22);
557 ty = _mm_mul_pd(fscal,dy22);
558 tz = _mm_mul_pd(fscal,dz22);
560 /* Update vectorial force */
561 fix2 = _mm_add_pd(fix2,tx);
562 fiy2 = _mm_add_pd(fiy2,ty);
563 fiz2 = _mm_add_pd(fiz2,tz);
565 fjx2 = _mm_add_pd(fjx2,tx);
566 fjy2 = _mm_add_pd(fjy2,ty);
567 fjz2 = _mm_add_pd(fjz2,tz);
569 gmx_mm_decrement_3rvec_2ptr_swizzle_pd(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
571 /* Inner loop uses 323 flops */
578 j_coord_offsetA = DIM*jnrA;
580 /* load j atom coordinates */
581 gmx_mm_load_3rvec_1ptr_swizzle_pd(x+j_coord_offsetA,
582 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
584 /* Calculate displacement vector */
585 dx00 = _mm_sub_pd(ix0,jx0);
586 dy00 = _mm_sub_pd(iy0,jy0);
587 dz00 = _mm_sub_pd(iz0,jz0);
588 dx01 = _mm_sub_pd(ix0,jx1);
589 dy01 = _mm_sub_pd(iy0,jy1);
590 dz01 = _mm_sub_pd(iz0,jz1);
591 dx02 = _mm_sub_pd(ix0,jx2);
592 dy02 = _mm_sub_pd(iy0,jy2);
593 dz02 = _mm_sub_pd(iz0,jz2);
594 dx10 = _mm_sub_pd(ix1,jx0);
595 dy10 = _mm_sub_pd(iy1,jy0);
596 dz10 = _mm_sub_pd(iz1,jz0);
597 dx11 = _mm_sub_pd(ix1,jx1);
598 dy11 = _mm_sub_pd(iy1,jy1);
599 dz11 = _mm_sub_pd(iz1,jz1);
600 dx12 = _mm_sub_pd(ix1,jx2);
601 dy12 = _mm_sub_pd(iy1,jy2);
602 dz12 = _mm_sub_pd(iz1,jz2);
603 dx20 = _mm_sub_pd(ix2,jx0);
604 dy20 = _mm_sub_pd(iy2,jy0);
605 dz20 = _mm_sub_pd(iz2,jz0);
606 dx21 = _mm_sub_pd(ix2,jx1);
607 dy21 = _mm_sub_pd(iy2,jy1);
608 dz21 = _mm_sub_pd(iz2,jz1);
609 dx22 = _mm_sub_pd(ix2,jx2);
610 dy22 = _mm_sub_pd(iy2,jy2);
611 dz22 = _mm_sub_pd(iz2,jz2);
613 /* Calculate squared distance and things based on it */
614 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
615 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
616 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
617 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
618 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
619 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
620 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
621 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
622 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
624 rinv00 = sse41_invsqrt_d(rsq00);
625 rinv01 = sse41_invsqrt_d(rsq01);
626 rinv02 = sse41_invsqrt_d(rsq02);
627 rinv10 = sse41_invsqrt_d(rsq10);
628 rinv11 = sse41_invsqrt_d(rsq11);
629 rinv12 = sse41_invsqrt_d(rsq12);
630 rinv20 = sse41_invsqrt_d(rsq20);
631 rinv21 = sse41_invsqrt_d(rsq21);
632 rinv22 = sse41_invsqrt_d(rsq22);
634 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
635 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
636 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
637 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
638 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
639 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
640 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
641 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
642 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
644 fjx0 = _mm_setzero_pd();
645 fjy0 = _mm_setzero_pd();
646 fjz0 = _mm_setzero_pd();
647 fjx1 = _mm_setzero_pd();
648 fjy1 = _mm_setzero_pd();
649 fjz1 = _mm_setzero_pd();
650 fjx2 = _mm_setzero_pd();
651 fjy2 = _mm_setzero_pd();
652 fjz2 = _mm_setzero_pd();
654 /**************************
655 * CALCULATE INTERACTIONS *
656 **************************/
658 r00 = _mm_mul_pd(rsq00,rinv00);
660 /* Calculate table index by multiplying r with table scale and truncate to integer */
661 rt = _mm_mul_pd(r00,vftabscale);
662 vfitab = _mm_cvttpd_epi32(rt);
663 vfeps = _mm_sub_pd(rt,_mm_round_pd(rt, _MM_FROUND_FLOOR));
664 vfitab = _mm_slli_epi32(vfitab,3);
666 /* REACTION-FIELD ELECTROSTATICS */
667 velec = _mm_mul_pd(qq00,_mm_sub_pd(_mm_add_pd(rinv00,_mm_mul_pd(krf,rsq00)),crf));
668 felec = _mm_mul_pd(qq00,_mm_sub_pd(_mm_mul_pd(rinv00,rinvsq00),krf2));
670 /* CUBIC SPLINE TABLE DISPERSION */
671 Y = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) );
672 F = _mm_setzero_pd();
673 GMX_MM_TRANSPOSE2_PD(Y,F);
674 G = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) +2);
675 H = _mm_setzero_pd();
676 GMX_MM_TRANSPOSE2_PD(G,H);
677 Heps = _mm_mul_pd(vfeps,H);
678 Fp = _mm_add_pd(F,_mm_mul_pd(vfeps,_mm_add_pd(G,Heps)));
679 VV = _mm_add_pd(Y,_mm_mul_pd(vfeps,Fp));
680 vvdw6 = _mm_mul_pd(c6_00,VV);
681 FF = _mm_add_pd(Fp,_mm_mul_pd(vfeps,_mm_add_pd(G,_mm_add_pd(Heps,Heps))));
682 fvdw6 = _mm_mul_pd(c6_00,FF);
684 /* CUBIC SPLINE TABLE REPULSION */
685 vfitab = _mm_add_epi32(vfitab,ifour);
686 Y = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) );
687 F = _mm_setzero_pd();
688 GMX_MM_TRANSPOSE2_PD(Y,F);
689 G = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) +2);
690 H = _mm_setzero_pd();
691 GMX_MM_TRANSPOSE2_PD(G,H);
692 Heps = _mm_mul_pd(vfeps,H);
693 Fp = _mm_add_pd(F,_mm_mul_pd(vfeps,_mm_add_pd(G,Heps)));
694 VV = _mm_add_pd(Y,_mm_mul_pd(vfeps,Fp));
695 vvdw12 = _mm_mul_pd(c12_00,VV);
696 FF = _mm_add_pd(Fp,_mm_mul_pd(vfeps,_mm_add_pd(G,_mm_add_pd(Heps,Heps))));
697 fvdw12 = _mm_mul_pd(c12_00,FF);
698 vvdw = _mm_add_pd(vvdw12,vvdw6);
699 fvdw = _mm_xor_pd(signbit,_mm_mul_pd(_mm_add_pd(fvdw6,fvdw12),_mm_mul_pd(vftabscale,rinv00)));
701 /* Update potential sum for this i atom from the interaction with this j atom. */
702 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
703 velecsum = _mm_add_pd(velecsum,velec);
704 vvdw = _mm_unpacklo_pd(vvdw,_mm_setzero_pd());
705 vvdwsum = _mm_add_pd(vvdwsum,vvdw);
707 fscal = _mm_add_pd(felec,fvdw);
709 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
711 /* Calculate temporary vectorial force */
712 tx = _mm_mul_pd(fscal,dx00);
713 ty = _mm_mul_pd(fscal,dy00);
714 tz = _mm_mul_pd(fscal,dz00);
716 /* Update vectorial force */
717 fix0 = _mm_add_pd(fix0,tx);
718 fiy0 = _mm_add_pd(fiy0,ty);
719 fiz0 = _mm_add_pd(fiz0,tz);
721 fjx0 = _mm_add_pd(fjx0,tx);
722 fjy0 = _mm_add_pd(fjy0,ty);
723 fjz0 = _mm_add_pd(fjz0,tz);
725 /**************************
726 * CALCULATE INTERACTIONS *
727 **************************/
729 /* REACTION-FIELD ELECTROSTATICS */
730 velec = _mm_mul_pd(qq01,_mm_sub_pd(_mm_add_pd(rinv01,_mm_mul_pd(krf,rsq01)),crf));
731 felec = _mm_mul_pd(qq01,_mm_sub_pd(_mm_mul_pd(rinv01,rinvsq01),krf2));
733 /* Update potential sum for this i atom from the interaction with this j atom. */
734 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
735 velecsum = _mm_add_pd(velecsum,velec);
739 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
741 /* Calculate temporary vectorial force */
742 tx = _mm_mul_pd(fscal,dx01);
743 ty = _mm_mul_pd(fscal,dy01);
744 tz = _mm_mul_pd(fscal,dz01);
746 /* Update vectorial force */
747 fix0 = _mm_add_pd(fix0,tx);
748 fiy0 = _mm_add_pd(fiy0,ty);
749 fiz0 = _mm_add_pd(fiz0,tz);
751 fjx1 = _mm_add_pd(fjx1,tx);
752 fjy1 = _mm_add_pd(fjy1,ty);
753 fjz1 = _mm_add_pd(fjz1,tz);
755 /**************************
756 * CALCULATE INTERACTIONS *
757 **************************/
759 /* REACTION-FIELD ELECTROSTATICS */
760 velec = _mm_mul_pd(qq02,_mm_sub_pd(_mm_add_pd(rinv02,_mm_mul_pd(krf,rsq02)),crf));
761 felec = _mm_mul_pd(qq02,_mm_sub_pd(_mm_mul_pd(rinv02,rinvsq02),krf2));
763 /* Update potential sum for this i atom from the interaction with this j atom. */
764 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
765 velecsum = _mm_add_pd(velecsum,velec);
769 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
771 /* Calculate temporary vectorial force */
772 tx = _mm_mul_pd(fscal,dx02);
773 ty = _mm_mul_pd(fscal,dy02);
774 tz = _mm_mul_pd(fscal,dz02);
776 /* Update vectorial force */
777 fix0 = _mm_add_pd(fix0,tx);
778 fiy0 = _mm_add_pd(fiy0,ty);
779 fiz0 = _mm_add_pd(fiz0,tz);
781 fjx2 = _mm_add_pd(fjx2,tx);
782 fjy2 = _mm_add_pd(fjy2,ty);
783 fjz2 = _mm_add_pd(fjz2,tz);
785 /**************************
786 * CALCULATE INTERACTIONS *
787 **************************/
789 /* REACTION-FIELD ELECTROSTATICS */
790 velec = _mm_mul_pd(qq10,_mm_sub_pd(_mm_add_pd(rinv10,_mm_mul_pd(krf,rsq10)),crf));
791 felec = _mm_mul_pd(qq10,_mm_sub_pd(_mm_mul_pd(rinv10,rinvsq10),krf2));
793 /* Update potential sum for this i atom from the interaction with this j atom. */
794 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
795 velecsum = _mm_add_pd(velecsum,velec);
799 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
801 /* Calculate temporary vectorial force */
802 tx = _mm_mul_pd(fscal,dx10);
803 ty = _mm_mul_pd(fscal,dy10);
804 tz = _mm_mul_pd(fscal,dz10);
806 /* Update vectorial force */
807 fix1 = _mm_add_pd(fix1,tx);
808 fiy1 = _mm_add_pd(fiy1,ty);
809 fiz1 = _mm_add_pd(fiz1,tz);
811 fjx0 = _mm_add_pd(fjx0,tx);
812 fjy0 = _mm_add_pd(fjy0,ty);
813 fjz0 = _mm_add_pd(fjz0,tz);
815 /**************************
816 * CALCULATE INTERACTIONS *
817 **************************/
819 /* REACTION-FIELD ELECTROSTATICS */
820 velec = _mm_mul_pd(qq11,_mm_sub_pd(_mm_add_pd(rinv11,_mm_mul_pd(krf,rsq11)),crf));
821 felec = _mm_mul_pd(qq11,_mm_sub_pd(_mm_mul_pd(rinv11,rinvsq11),krf2));
823 /* Update potential sum for this i atom from the interaction with this j atom. */
824 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
825 velecsum = _mm_add_pd(velecsum,velec);
829 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
831 /* Calculate temporary vectorial force */
832 tx = _mm_mul_pd(fscal,dx11);
833 ty = _mm_mul_pd(fscal,dy11);
834 tz = _mm_mul_pd(fscal,dz11);
836 /* Update vectorial force */
837 fix1 = _mm_add_pd(fix1,tx);
838 fiy1 = _mm_add_pd(fiy1,ty);
839 fiz1 = _mm_add_pd(fiz1,tz);
841 fjx1 = _mm_add_pd(fjx1,tx);
842 fjy1 = _mm_add_pd(fjy1,ty);
843 fjz1 = _mm_add_pd(fjz1,tz);
845 /**************************
846 * CALCULATE INTERACTIONS *
847 **************************/
849 /* REACTION-FIELD ELECTROSTATICS */
850 velec = _mm_mul_pd(qq12,_mm_sub_pd(_mm_add_pd(rinv12,_mm_mul_pd(krf,rsq12)),crf));
851 felec = _mm_mul_pd(qq12,_mm_sub_pd(_mm_mul_pd(rinv12,rinvsq12),krf2));
853 /* Update potential sum for this i atom from the interaction with this j atom. */
854 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
855 velecsum = _mm_add_pd(velecsum,velec);
859 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
861 /* Calculate temporary vectorial force */
862 tx = _mm_mul_pd(fscal,dx12);
863 ty = _mm_mul_pd(fscal,dy12);
864 tz = _mm_mul_pd(fscal,dz12);
866 /* Update vectorial force */
867 fix1 = _mm_add_pd(fix1,tx);
868 fiy1 = _mm_add_pd(fiy1,ty);
869 fiz1 = _mm_add_pd(fiz1,tz);
871 fjx2 = _mm_add_pd(fjx2,tx);
872 fjy2 = _mm_add_pd(fjy2,ty);
873 fjz2 = _mm_add_pd(fjz2,tz);
875 /**************************
876 * CALCULATE INTERACTIONS *
877 **************************/
879 /* REACTION-FIELD ELECTROSTATICS */
880 velec = _mm_mul_pd(qq20,_mm_sub_pd(_mm_add_pd(rinv20,_mm_mul_pd(krf,rsq20)),crf));
881 felec = _mm_mul_pd(qq20,_mm_sub_pd(_mm_mul_pd(rinv20,rinvsq20),krf2));
883 /* Update potential sum for this i atom from the interaction with this j atom. */
884 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
885 velecsum = _mm_add_pd(velecsum,velec);
889 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
891 /* Calculate temporary vectorial force */
892 tx = _mm_mul_pd(fscal,dx20);
893 ty = _mm_mul_pd(fscal,dy20);
894 tz = _mm_mul_pd(fscal,dz20);
896 /* Update vectorial force */
897 fix2 = _mm_add_pd(fix2,tx);
898 fiy2 = _mm_add_pd(fiy2,ty);
899 fiz2 = _mm_add_pd(fiz2,tz);
901 fjx0 = _mm_add_pd(fjx0,tx);
902 fjy0 = _mm_add_pd(fjy0,ty);
903 fjz0 = _mm_add_pd(fjz0,tz);
905 /**************************
906 * CALCULATE INTERACTIONS *
907 **************************/
909 /* REACTION-FIELD ELECTROSTATICS */
910 velec = _mm_mul_pd(qq21,_mm_sub_pd(_mm_add_pd(rinv21,_mm_mul_pd(krf,rsq21)),crf));
911 felec = _mm_mul_pd(qq21,_mm_sub_pd(_mm_mul_pd(rinv21,rinvsq21),krf2));
913 /* Update potential sum for this i atom from the interaction with this j atom. */
914 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
915 velecsum = _mm_add_pd(velecsum,velec);
919 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
921 /* Calculate temporary vectorial force */
922 tx = _mm_mul_pd(fscal,dx21);
923 ty = _mm_mul_pd(fscal,dy21);
924 tz = _mm_mul_pd(fscal,dz21);
926 /* Update vectorial force */
927 fix2 = _mm_add_pd(fix2,tx);
928 fiy2 = _mm_add_pd(fiy2,ty);
929 fiz2 = _mm_add_pd(fiz2,tz);
931 fjx1 = _mm_add_pd(fjx1,tx);
932 fjy1 = _mm_add_pd(fjy1,ty);
933 fjz1 = _mm_add_pd(fjz1,tz);
935 /**************************
936 * CALCULATE INTERACTIONS *
937 **************************/
939 /* REACTION-FIELD ELECTROSTATICS */
940 velec = _mm_mul_pd(qq22,_mm_sub_pd(_mm_add_pd(rinv22,_mm_mul_pd(krf,rsq22)),crf));
941 felec = _mm_mul_pd(qq22,_mm_sub_pd(_mm_mul_pd(rinv22,rinvsq22),krf2));
943 /* Update potential sum for this i atom from the interaction with this j atom. */
944 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
945 velecsum = _mm_add_pd(velecsum,velec);
949 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
951 /* Calculate temporary vectorial force */
952 tx = _mm_mul_pd(fscal,dx22);
953 ty = _mm_mul_pd(fscal,dy22);
954 tz = _mm_mul_pd(fscal,dz22);
956 /* Update vectorial force */
957 fix2 = _mm_add_pd(fix2,tx);
958 fiy2 = _mm_add_pd(fiy2,ty);
959 fiz2 = _mm_add_pd(fiz2,tz);
961 fjx2 = _mm_add_pd(fjx2,tx);
962 fjy2 = _mm_add_pd(fjy2,ty);
963 fjz2 = _mm_add_pd(fjz2,tz);
965 gmx_mm_decrement_3rvec_1ptr_swizzle_pd(f+j_coord_offsetA,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
967 /* Inner loop uses 323 flops */
970 /* End of innermost loop */
972 gmx_mm_update_iforce_3atom_swizzle_pd(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
973 f+i_coord_offset,fshift+i_shift_offset);
976 /* Update potential energies */
977 gmx_mm_update_1pot_pd(velecsum,kernel_data->energygrp_elec+ggid);
978 gmx_mm_update_1pot_pd(vvdwsum,kernel_data->energygrp_vdw+ggid);
980 /* Increment number of inner iterations */
981 inneriter += j_index_end - j_index_start;
983 /* Outer loop uses 20 flops */
986 /* Increment number of outer iterations */
989 /* Update outer/inner flops */
991 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_VF,outeriter*20 + inneriter*323);
994 * Gromacs nonbonded kernel: nb_kernel_ElecRF_VdwCSTab_GeomW3W3_F_sse4_1_double
995 * Electrostatics interaction: ReactionField
996 * VdW interaction: CubicSplineTable
997 * Geometry: Water3-Water3
998 * Calculate force/pot: Force
1001 nb_kernel_ElecRF_VdwCSTab_GeomW3W3_F_sse4_1_double
1002 (t_nblist * gmx_restrict nlist,
1003 rvec * gmx_restrict xx,
1004 rvec * gmx_restrict ff,
1005 struct t_forcerec * gmx_restrict fr,
1006 t_mdatoms * gmx_restrict mdatoms,
1007 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
1008 t_nrnb * gmx_restrict nrnb)
1010 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
1011 * just 0 for non-waters.
1012 * Suffixes A,B refer to j loop unrolling done with SSE double precision, e.g. for the two different
1013 * jnr indices corresponding to data put in the four positions in the SIMD register.
1015 int i_shift_offset,i_coord_offset,outeriter,inneriter;
1016 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1018 int j_coord_offsetA,j_coord_offsetB;
1019 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
1020 real rcutoff_scalar;
1021 real *shiftvec,*fshift,*x,*f;
1022 __m128d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
1024 __m128d ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
1026 __m128d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1028 __m128d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1029 int vdwjidx0A,vdwjidx0B;
1030 __m128d jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
1031 int vdwjidx1A,vdwjidx1B;
1032 __m128d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1033 int vdwjidx2A,vdwjidx2B;
1034 __m128d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1035 __m128d dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
1036 __m128d dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
1037 __m128d dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
1038 __m128d dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
1039 __m128d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1040 __m128d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1041 __m128d dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
1042 __m128d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1043 __m128d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1044 __m128d velec,felec,velecsum,facel,crf,krf,krf2;
1047 __m128d rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
1050 __m128d one_sixth = _mm_set1_pd(1.0/6.0);
1051 __m128d one_twelfth = _mm_set1_pd(1.0/12.0);
1053 __m128i ifour = _mm_set1_epi32(4);
1054 __m128d rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
1056 __m128d dummy_mask,cutoff_mask;
1057 __m128d signbit = gmx_mm_castsi128_pd( _mm_set_epi32(0x80000000,0x00000000,0x80000000,0x00000000) );
1058 __m128d one = _mm_set1_pd(1.0);
1059 __m128d two = _mm_set1_pd(2.0);
1065 jindex = nlist->jindex;
1067 shiftidx = nlist->shift;
1069 shiftvec = fr->shift_vec[0];
1070 fshift = fr->fshift[0];
1071 facel = _mm_set1_pd(fr->ic->epsfac);
1072 charge = mdatoms->chargeA;
1073 krf = _mm_set1_pd(fr->ic->k_rf);
1074 krf2 = _mm_set1_pd(fr->ic->k_rf*2.0);
1075 crf = _mm_set1_pd(fr->ic->c_rf);
1076 nvdwtype = fr->ntype;
1077 vdwparam = fr->nbfp;
1078 vdwtype = mdatoms->typeA;
1080 vftab = kernel_data->table_vdw->data;
1081 vftabscale = _mm_set1_pd(kernel_data->table_vdw->scale);
1083 /* Setup water-specific parameters */
1084 inr = nlist->iinr[0];
1085 iq0 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+0]));
1086 iq1 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+1]));
1087 iq2 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+2]));
1088 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
1090 jq0 = _mm_set1_pd(charge[inr+0]);
1091 jq1 = _mm_set1_pd(charge[inr+1]);
1092 jq2 = _mm_set1_pd(charge[inr+2]);
1093 vdwjidx0A = 2*vdwtype[inr+0];
1094 qq00 = _mm_mul_pd(iq0,jq0);
1095 c6_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A]);
1096 c12_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A+1]);
1097 qq01 = _mm_mul_pd(iq0,jq1);
1098 qq02 = _mm_mul_pd(iq0,jq2);
1099 qq10 = _mm_mul_pd(iq1,jq0);
1100 qq11 = _mm_mul_pd(iq1,jq1);
1101 qq12 = _mm_mul_pd(iq1,jq2);
1102 qq20 = _mm_mul_pd(iq2,jq0);
1103 qq21 = _mm_mul_pd(iq2,jq1);
1104 qq22 = _mm_mul_pd(iq2,jq2);
1106 /* Avoid stupid compiler warnings */
1108 j_coord_offsetA = 0;
1109 j_coord_offsetB = 0;
1114 /* Start outer loop over neighborlists */
1115 for(iidx=0; iidx<nri; iidx++)
1117 /* Load shift vector for this list */
1118 i_shift_offset = DIM*shiftidx[iidx];
1120 /* Load limits for loop over neighbors */
1121 j_index_start = jindex[iidx];
1122 j_index_end = jindex[iidx+1];
1124 /* Get outer coordinate index */
1126 i_coord_offset = DIM*inr;
1128 /* Load i particle coords and add shift vector */
1129 gmx_mm_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset,
1130 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
1132 fix0 = _mm_setzero_pd();
1133 fiy0 = _mm_setzero_pd();
1134 fiz0 = _mm_setzero_pd();
1135 fix1 = _mm_setzero_pd();
1136 fiy1 = _mm_setzero_pd();
1137 fiz1 = _mm_setzero_pd();
1138 fix2 = _mm_setzero_pd();
1139 fiy2 = _mm_setzero_pd();
1140 fiz2 = _mm_setzero_pd();
1142 /* Start inner kernel loop */
1143 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
1146 /* Get j neighbor index, and coordinate index */
1148 jnrB = jjnr[jidx+1];
1149 j_coord_offsetA = DIM*jnrA;
1150 j_coord_offsetB = DIM*jnrB;
1152 /* load j atom coordinates */
1153 gmx_mm_load_3rvec_2ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
1154 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1156 /* Calculate displacement vector */
1157 dx00 = _mm_sub_pd(ix0,jx0);
1158 dy00 = _mm_sub_pd(iy0,jy0);
1159 dz00 = _mm_sub_pd(iz0,jz0);
1160 dx01 = _mm_sub_pd(ix0,jx1);
1161 dy01 = _mm_sub_pd(iy0,jy1);
1162 dz01 = _mm_sub_pd(iz0,jz1);
1163 dx02 = _mm_sub_pd(ix0,jx2);
1164 dy02 = _mm_sub_pd(iy0,jy2);
1165 dz02 = _mm_sub_pd(iz0,jz2);
1166 dx10 = _mm_sub_pd(ix1,jx0);
1167 dy10 = _mm_sub_pd(iy1,jy0);
1168 dz10 = _mm_sub_pd(iz1,jz0);
1169 dx11 = _mm_sub_pd(ix1,jx1);
1170 dy11 = _mm_sub_pd(iy1,jy1);
1171 dz11 = _mm_sub_pd(iz1,jz1);
1172 dx12 = _mm_sub_pd(ix1,jx2);
1173 dy12 = _mm_sub_pd(iy1,jy2);
1174 dz12 = _mm_sub_pd(iz1,jz2);
1175 dx20 = _mm_sub_pd(ix2,jx0);
1176 dy20 = _mm_sub_pd(iy2,jy0);
1177 dz20 = _mm_sub_pd(iz2,jz0);
1178 dx21 = _mm_sub_pd(ix2,jx1);
1179 dy21 = _mm_sub_pd(iy2,jy1);
1180 dz21 = _mm_sub_pd(iz2,jz1);
1181 dx22 = _mm_sub_pd(ix2,jx2);
1182 dy22 = _mm_sub_pd(iy2,jy2);
1183 dz22 = _mm_sub_pd(iz2,jz2);
1185 /* Calculate squared distance and things based on it */
1186 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
1187 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
1188 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
1189 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
1190 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
1191 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
1192 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
1193 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
1194 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
1196 rinv00 = sse41_invsqrt_d(rsq00);
1197 rinv01 = sse41_invsqrt_d(rsq01);
1198 rinv02 = sse41_invsqrt_d(rsq02);
1199 rinv10 = sse41_invsqrt_d(rsq10);
1200 rinv11 = sse41_invsqrt_d(rsq11);
1201 rinv12 = sse41_invsqrt_d(rsq12);
1202 rinv20 = sse41_invsqrt_d(rsq20);
1203 rinv21 = sse41_invsqrt_d(rsq21);
1204 rinv22 = sse41_invsqrt_d(rsq22);
1206 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
1207 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
1208 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
1209 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
1210 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
1211 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
1212 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
1213 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
1214 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
1216 fjx0 = _mm_setzero_pd();
1217 fjy0 = _mm_setzero_pd();
1218 fjz0 = _mm_setzero_pd();
1219 fjx1 = _mm_setzero_pd();
1220 fjy1 = _mm_setzero_pd();
1221 fjz1 = _mm_setzero_pd();
1222 fjx2 = _mm_setzero_pd();
1223 fjy2 = _mm_setzero_pd();
1224 fjz2 = _mm_setzero_pd();
1226 /**************************
1227 * CALCULATE INTERACTIONS *
1228 **************************/
1230 r00 = _mm_mul_pd(rsq00,rinv00);
1232 /* Calculate table index by multiplying r with table scale and truncate to integer */
1233 rt = _mm_mul_pd(r00,vftabscale);
1234 vfitab = _mm_cvttpd_epi32(rt);
1235 vfeps = _mm_sub_pd(rt,_mm_round_pd(rt, _MM_FROUND_FLOOR));
1236 vfitab = _mm_slli_epi32(vfitab,3);
1238 /* REACTION-FIELD ELECTROSTATICS */
1239 felec = _mm_mul_pd(qq00,_mm_sub_pd(_mm_mul_pd(rinv00,rinvsq00),krf2));
1241 /* CUBIC SPLINE TABLE DISPERSION */
1242 Y = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) );
1243 F = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,1) );
1244 GMX_MM_TRANSPOSE2_PD(Y,F);
1245 G = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) +2);
1246 H = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,1) +2);
1247 GMX_MM_TRANSPOSE2_PD(G,H);
1248 Heps = _mm_mul_pd(vfeps,H);
1249 Fp = _mm_add_pd(F,_mm_mul_pd(vfeps,_mm_add_pd(G,Heps)));
1250 FF = _mm_add_pd(Fp,_mm_mul_pd(vfeps,_mm_add_pd(G,_mm_add_pd(Heps,Heps))));
1251 fvdw6 = _mm_mul_pd(c6_00,FF);
1253 /* CUBIC SPLINE TABLE REPULSION */
1254 vfitab = _mm_add_epi32(vfitab,ifour);
1255 Y = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) );
1256 F = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,1) );
1257 GMX_MM_TRANSPOSE2_PD(Y,F);
1258 G = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) +2);
1259 H = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,1) +2);
1260 GMX_MM_TRANSPOSE2_PD(G,H);
1261 Heps = _mm_mul_pd(vfeps,H);
1262 Fp = _mm_add_pd(F,_mm_mul_pd(vfeps,_mm_add_pd(G,Heps)));
1263 FF = _mm_add_pd(Fp,_mm_mul_pd(vfeps,_mm_add_pd(G,_mm_add_pd(Heps,Heps))));
1264 fvdw12 = _mm_mul_pd(c12_00,FF);
1265 fvdw = _mm_xor_pd(signbit,_mm_mul_pd(_mm_add_pd(fvdw6,fvdw12),_mm_mul_pd(vftabscale,rinv00)));
1267 fscal = _mm_add_pd(felec,fvdw);
1269 /* Calculate temporary vectorial force */
1270 tx = _mm_mul_pd(fscal,dx00);
1271 ty = _mm_mul_pd(fscal,dy00);
1272 tz = _mm_mul_pd(fscal,dz00);
1274 /* Update vectorial force */
1275 fix0 = _mm_add_pd(fix0,tx);
1276 fiy0 = _mm_add_pd(fiy0,ty);
1277 fiz0 = _mm_add_pd(fiz0,tz);
1279 fjx0 = _mm_add_pd(fjx0,tx);
1280 fjy0 = _mm_add_pd(fjy0,ty);
1281 fjz0 = _mm_add_pd(fjz0,tz);
1283 /**************************
1284 * CALCULATE INTERACTIONS *
1285 **************************/
1287 /* REACTION-FIELD ELECTROSTATICS */
1288 felec = _mm_mul_pd(qq01,_mm_sub_pd(_mm_mul_pd(rinv01,rinvsq01),krf2));
1292 /* Calculate temporary vectorial force */
1293 tx = _mm_mul_pd(fscal,dx01);
1294 ty = _mm_mul_pd(fscal,dy01);
1295 tz = _mm_mul_pd(fscal,dz01);
1297 /* Update vectorial force */
1298 fix0 = _mm_add_pd(fix0,tx);
1299 fiy0 = _mm_add_pd(fiy0,ty);
1300 fiz0 = _mm_add_pd(fiz0,tz);
1302 fjx1 = _mm_add_pd(fjx1,tx);
1303 fjy1 = _mm_add_pd(fjy1,ty);
1304 fjz1 = _mm_add_pd(fjz1,tz);
1306 /**************************
1307 * CALCULATE INTERACTIONS *
1308 **************************/
1310 /* REACTION-FIELD ELECTROSTATICS */
1311 felec = _mm_mul_pd(qq02,_mm_sub_pd(_mm_mul_pd(rinv02,rinvsq02),krf2));
1315 /* Calculate temporary vectorial force */
1316 tx = _mm_mul_pd(fscal,dx02);
1317 ty = _mm_mul_pd(fscal,dy02);
1318 tz = _mm_mul_pd(fscal,dz02);
1320 /* Update vectorial force */
1321 fix0 = _mm_add_pd(fix0,tx);
1322 fiy0 = _mm_add_pd(fiy0,ty);
1323 fiz0 = _mm_add_pd(fiz0,tz);
1325 fjx2 = _mm_add_pd(fjx2,tx);
1326 fjy2 = _mm_add_pd(fjy2,ty);
1327 fjz2 = _mm_add_pd(fjz2,tz);
1329 /**************************
1330 * CALCULATE INTERACTIONS *
1331 **************************/
1333 /* REACTION-FIELD ELECTROSTATICS */
1334 felec = _mm_mul_pd(qq10,_mm_sub_pd(_mm_mul_pd(rinv10,rinvsq10),krf2));
1338 /* Calculate temporary vectorial force */
1339 tx = _mm_mul_pd(fscal,dx10);
1340 ty = _mm_mul_pd(fscal,dy10);
1341 tz = _mm_mul_pd(fscal,dz10);
1343 /* Update vectorial force */
1344 fix1 = _mm_add_pd(fix1,tx);
1345 fiy1 = _mm_add_pd(fiy1,ty);
1346 fiz1 = _mm_add_pd(fiz1,tz);
1348 fjx0 = _mm_add_pd(fjx0,tx);
1349 fjy0 = _mm_add_pd(fjy0,ty);
1350 fjz0 = _mm_add_pd(fjz0,tz);
1352 /**************************
1353 * CALCULATE INTERACTIONS *
1354 **************************/
1356 /* REACTION-FIELD ELECTROSTATICS */
1357 felec = _mm_mul_pd(qq11,_mm_sub_pd(_mm_mul_pd(rinv11,rinvsq11),krf2));
1361 /* Calculate temporary vectorial force */
1362 tx = _mm_mul_pd(fscal,dx11);
1363 ty = _mm_mul_pd(fscal,dy11);
1364 tz = _mm_mul_pd(fscal,dz11);
1366 /* Update vectorial force */
1367 fix1 = _mm_add_pd(fix1,tx);
1368 fiy1 = _mm_add_pd(fiy1,ty);
1369 fiz1 = _mm_add_pd(fiz1,tz);
1371 fjx1 = _mm_add_pd(fjx1,tx);
1372 fjy1 = _mm_add_pd(fjy1,ty);
1373 fjz1 = _mm_add_pd(fjz1,tz);
1375 /**************************
1376 * CALCULATE INTERACTIONS *
1377 **************************/
1379 /* REACTION-FIELD ELECTROSTATICS */
1380 felec = _mm_mul_pd(qq12,_mm_sub_pd(_mm_mul_pd(rinv12,rinvsq12),krf2));
1384 /* Calculate temporary vectorial force */
1385 tx = _mm_mul_pd(fscal,dx12);
1386 ty = _mm_mul_pd(fscal,dy12);
1387 tz = _mm_mul_pd(fscal,dz12);
1389 /* Update vectorial force */
1390 fix1 = _mm_add_pd(fix1,tx);
1391 fiy1 = _mm_add_pd(fiy1,ty);
1392 fiz1 = _mm_add_pd(fiz1,tz);
1394 fjx2 = _mm_add_pd(fjx2,tx);
1395 fjy2 = _mm_add_pd(fjy2,ty);
1396 fjz2 = _mm_add_pd(fjz2,tz);
1398 /**************************
1399 * CALCULATE INTERACTIONS *
1400 **************************/
1402 /* REACTION-FIELD ELECTROSTATICS */
1403 felec = _mm_mul_pd(qq20,_mm_sub_pd(_mm_mul_pd(rinv20,rinvsq20),krf2));
1407 /* Calculate temporary vectorial force */
1408 tx = _mm_mul_pd(fscal,dx20);
1409 ty = _mm_mul_pd(fscal,dy20);
1410 tz = _mm_mul_pd(fscal,dz20);
1412 /* Update vectorial force */
1413 fix2 = _mm_add_pd(fix2,tx);
1414 fiy2 = _mm_add_pd(fiy2,ty);
1415 fiz2 = _mm_add_pd(fiz2,tz);
1417 fjx0 = _mm_add_pd(fjx0,tx);
1418 fjy0 = _mm_add_pd(fjy0,ty);
1419 fjz0 = _mm_add_pd(fjz0,tz);
1421 /**************************
1422 * CALCULATE INTERACTIONS *
1423 **************************/
1425 /* REACTION-FIELD ELECTROSTATICS */
1426 felec = _mm_mul_pd(qq21,_mm_sub_pd(_mm_mul_pd(rinv21,rinvsq21),krf2));
1430 /* Calculate temporary vectorial force */
1431 tx = _mm_mul_pd(fscal,dx21);
1432 ty = _mm_mul_pd(fscal,dy21);
1433 tz = _mm_mul_pd(fscal,dz21);
1435 /* Update vectorial force */
1436 fix2 = _mm_add_pd(fix2,tx);
1437 fiy2 = _mm_add_pd(fiy2,ty);
1438 fiz2 = _mm_add_pd(fiz2,tz);
1440 fjx1 = _mm_add_pd(fjx1,tx);
1441 fjy1 = _mm_add_pd(fjy1,ty);
1442 fjz1 = _mm_add_pd(fjz1,tz);
1444 /**************************
1445 * CALCULATE INTERACTIONS *
1446 **************************/
1448 /* REACTION-FIELD ELECTROSTATICS */
1449 felec = _mm_mul_pd(qq22,_mm_sub_pd(_mm_mul_pd(rinv22,rinvsq22),krf2));
1453 /* Calculate temporary vectorial force */
1454 tx = _mm_mul_pd(fscal,dx22);
1455 ty = _mm_mul_pd(fscal,dy22);
1456 tz = _mm_mul_pd(fscal,dz22);
1458 /* Update vectorial force */
1459 fix2 = _mm_add_pd(fix2,tx);
1460 fiy2 = _mm_add_pd(fiy2,ty);
1461 fiz2 = _mm_add_pd(fiz2,tz);
1463 fjx2 = _mm_add_pd(fjx2,tx);
1464 fjy2 = _mm_add_pd(fjy2,ty);
1465 fjz2 = _mm_add_pd(fjz2,tz);
1467 gmx_mm_decrement_3rvec_2ptr_swizzle_pd(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1469 /* Inner loop uses 270 flops */
1472 if(jidx<j_index_end)
1476 j_coord_offsetA = DIM*jnrA;
1478 /* load j atom coordinates */
1479 gmx_mm_load_3rvec_1ptr_swizzle_pd(x+j_coord_offsetA,
1480 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1482 /* Calculate displacement vector */
1483 dx00 = _mm_sub_pd(ix0,jx0);
1484 dy00 = _mm_sub_pd(iy0,jy0);
1485 dz00 = _mm_sub_pd(iz0,jz0);
1486 dx01 = _mm_sub_pd(ix0,jx1);
1487 dy01 = _mm_sub_pd(iy0,jy1);
1488 dz01 = _mm_sub_pd(iz0,jz1);
1489 dx02 = _mm_sub_pd(ix0,jx2);
1490 dy02 = _mm_sub_pd(iy0,jy2);
1491 dz02 = _mm_sub_pd(iz0,jz2);
1492 dx10 = _mm_sub_pd(ix1,jx0);
1493 dy10 = _mm_sub_pd(iy1,jy0);
1494 dz10 = _mm_sub_pd(iz1,jz0);
1495 dx11 = _mm_sub_pd(ix1,jx1);
1496 dy11 = _mm_sub_pd(iy1,jy1);
1497 dz11 = _mm_sub_pd(iz1,jz1);
1498 dx12 = _mm_sub_pd(ix1,jx2);
1499 dy12 = _mm_sub_pd(iy1,jy2);
1500 dz12 = _mm_sub_pd(iz1,jz2);
1501 dx20 = _mm_sub_pd(ix2,jx0);
1502 dy20 = _mm_sub_pd(iy2,jy0);
1503 dz20 = _mm_sub_pd(iz2,jz0);
1504 dx21 = _mm_sub_pd(ix2,jx1);
1505 dy21 = _mm_sub_pd(iy2,jy1);
1506 dz21 = _mm_sub_pd(iz2,jz1);
1507 dx22 = _mm_sub_pd(ix2,jx2);
1508 dy22 = _mm_sub_pd(iy2,jy2);
1509 dz22 = _mm_sub_pd(iz2,jz2);
1511 /* Calculate squared distance and things based on it */
1512 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
1513 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
1514 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
1515 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
1516 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
1517 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
1518 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
1519 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
1520 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
1522 rinv00 = sse41_invsqrt_d(rsq00);
1523 rinv01 = sse41_invsqrt_d(rsq01);
1524 rinv02 = sse41_invsqrt_d(rsq02);
1525 rinv10 = sse41_invsqrt_d(rsq10);
1526 rinv11 = sse41_invsqrt_d(rsq11);
1527 rinv12 = sse41_invsqrt_d(rsq12);
1528 rinv20 = sse41_invsqrt_d(rsq20);
1529 rinv21 = sse41_invsqrt_d(rsq21);
1530 rinv22 = sse41_invsqrt_d(rsq22);
1532 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
1533 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
1534 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
1535 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
1536 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
1537 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
1538 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
1539 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
1540 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
1542 fjx0 = _mm_setzero_pd();
1543 fjy0 = _mm_setzero_pd();
1544 fjz0 = _mm_setzero_pd();
1545 fjx1 = _mm_setzero_pd();
1546 fjy1 = _mm_setzero_pd();
1547 fjz1 = _mm_setzero_pd();
1548 fjx2 = _mm_setzero_pd();
1549 fjy2 = _mm_setzero_pd();
1550 fjz2 = _mm_setzero_pd();
1552 /**************************
1553 * CALCULATE INTERACTIONS *
1554 **************************/
1556 r00 = _mm_mul_pd(rsq00,rinv00);
1558 /* Calculate table index by multiplying r with table scale and truncate to integer */
1559 rt = _mm_mul_pd(r00,vftabscale);
1560 vfitab = _mm_cvttpd_epi32(rt);
1561 vfeps = _mm_sub_pd(rt,_mm_round_pd(rt, _MM_FROUND_FLOOR));
1562 vfitab = _mm_slli_epi32(vfitab,3);
1564 /* REACTION-FIELD ELECTROSTATICS */
1565 felec = _mm_mul_pd(qq00,_mm_sub_pd(_mm_mul_pd(rinv00,rinvsq00),krf2));
1567 /* CUBIC SPLINE TABLE DISPERSION */
1568 Y = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) );
1569 F = _mm_setzero_pd();
1570 GMX_MM_TRANSPOSE2_PD(Y,F);
1571 G = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) +2);
1572 H = _mm_setzero_pd();
1573 GMX_MM_TRANSPOSE2_PD(G,H);
1574 Heps = _mm_mul_pd(vfeps,H);
1575 Fp = _mm_add_pd(F,_mm_mul_pd(vfeps,_mm_add_pd(G,Heps)));
1576 FF = _mm_add_pd(Fp,_mm_mul_pd(vfeps,_mm_add_pd(G,_mm_add_pd(Heps,Heps))));
1577 fvdw6 = _mm_mul_pd(c6_00,FF);
1579 /* CUBIC SPLINE TABLE REPULSION */
1580 vfitab = _mm_add_epi32(vfitab,ifour);
1581 Y = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) );
1582 F = _mm_setzero_pd();
1583 GMX_MM_TRANSPOSE2_PD(Y,F);
1584 G = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) +2);
1585 H = _mm_setzero_pd();
1586 GMX_MM_TRANSPOSE2_PD(G,H);
1587 Heps = _mm_mul_pd(vfeps,H);
1588 Fp = _mm_add_pd(F,_mm_mul_pd(vfeps,_mm_add_pd(G,Heps)));
1589 FF = _mm_add_pd(Fp,_mm_mul_pd(vfeps,_mm_add_pd(G,_mm_add_pd(Heps,Heps))));
1590 fvdw12 = _mm_mul_pd(c12_00,FF);
1591 fvdw = _mm_xor_pd(signbit,_mm_mul_pd(_mm_add_pd(fvdw6,fvdw12),_mm_mul_pd(vftabscale,rinv00)));
1593 fscal = _mm_add_pd(felec,fvdw);
1595 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1597 /* Calculate temporary vectorial force */
1598 tx = _mm_mul_pd(fscal,dx00);
1599 ty = _mm_mul_pd(fscal,dy00);
1600 tz = _mm_mul_pd(fscal,dz00);
1602 /* Update vectorial force */
1603 fix0 = _mm_add_pd(fix0,tx);
1604 fiy0 = _mm_add_pd(fiy0,ty);
1605 fiz0 = _mm_add_pd(fiz0,tz);
1607 fjx0 = _mm_add_pd(fjx0,tx);
1608 fjy0 = _mm_add_pd(fjy0,ty);
1609 fjz0 = _mm_add_pd(fjz0,tz);
1611 /**************************
1612 * CALCULATE INTERACTIONS *
1613 **************************/
1615 /* REACTION-FIELD ELECTROSTATICS */
1616 felec = _mm_mul_pd(qq01,_mm_sub_pd(_mm_mul_pd(rinv01,rinvsq01),krf2));
1620 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1622 /* Calculate temporary vectorial force */
1623 tx = _mm_mul_pd(fscal,dx01);
1624 ty = _mm_mul_pd(fscal,dy01);
1625 tz = _mm_mul_pd(fscal,dz01);
1627 /* Update vectorial force */
1628 fix0 = _mm_add_pd(fix0,tx);
1629 fiy0 = _mm_add_pd(fiy0,ty);
1630 fiz0 = _mm_add_pd(fiz0,tz);
1632 fjx1 = _mm_add_pd(fjx1,tx);
1633 fjy1 = _mm_add_pd(fjy1,ty);
1634 fjz1 = _mm_add_pd(fjz1,tz);
1636 /**************************
1637 * CALCULATE INTERACTIONS *
1638 **************************/
1640 /* REACTION-FIELD ELECTROSTATICS */
1641 felec = _mm_mul_pd(qq02,_mm_sub_pd(_mm_mul_pd(rinv02,rinvsq02),krf2));
1645 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1647 /* Calculate temporary vectorial force */
1648 tx = _mm_mul_pd(fscal,dx02);
1649 ty = _mm_mul_pd(fscal,dy02);
1650 tz = _mm_mul_pd(fscal,dz02);
1652 /* Update vectorial force */
1653 fix0 = _mm_add_pd(fix0,tx);
1654 fiy0 = _mm_add_pd(fiy0,ty);
1655 fiz0 = _mm_add_pd(fiz0,tz);
1657 fjx2 = _mm_add_pd(fjx2,tx);
1658 fjy2 = _mm_add_pd(fjy2,ty);
1659 fjz2 = _mm_add_pd(fjz2,tz);
1661 /**************************
1662 * CALCULATE INTERACTIONS *
1663 **************************/
1665 /* REACTION-FIELD ELECTROSTATICS */
1666 felec = _mm_mul_pd(qq10,_mm_sub_pd(_mm_mul_pd(rinv10,rinvsq10),krf2));
1670 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1672 /* Calculate temporary vectorial force */
1673 tx = _mm_mul_pd(fscal,dx10);
1674 ty = _mm_mul_pd(fscal,dy10);
1675 tz = _mm_mul_pd(fscal,dz10);
1677 /* Update vectorial force */
1678 fix1 = _mm_add_pd(fix1,tx);
1679 fiy1 = _mm_add_pd(fiy1,ty);
1680 fiz1 = _mm_add_pd(fiz1,tz);
1682 fjx0 = _mm_add_pd(fjx0,tx);
1683 fjy0 = _mm_add_pd(fjy0,ty);
1684 fjz0 = _mm_add_pd(fjz0,tz);
1686 /**************************
1687 * CALCULATE INTERACTIONS *
1688 **************************/
1690 /* REACTION-FIELD ELECTROSTATICS */
1691 felec = _mm_mul_pd(qq11,_mm_sub_pd(_mm_mul_pd(rinv11,rinvsq11),krf2));
1695 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1697 /* Calculate temporary vectorial force */
1698 tx = _mm_mul_pd(fscal,dx11);
1699 ty = _mm_mul_pd(fscal,dy11);
1700 tz = _mm_mul_pd(fscal,dz11);
1702 /* Update vectorial force */
1703 fix1 = _mm_add_pd(fix1,tx);
1704 fiy1 = _mm_add_pd(fiy1,ty);
1705 fiz1 = _mm_add_pd(fiz1,tz);
1707 fjx1 = _mm_add_pd(fjx1,tx);
1708 fjy1 = _mm_add_pd(fjy1,ty);
1709 fjz1 = _mm_add_pd(fjz1,tz);
1711 /**************************
1712 * CALCULATE INTERACTIONS *
1713 **************************/
1715 /* REACTION-FIELD ELECTROSTATICS */
1716 felec = _mm_mul_pd(qq12,_mm_sub_pd(_mm_mul_pd(rinv12,rinvsq12),krf2));
1720 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1722 /* Calculate temporary vectorial force */
1723 tx = _mm_mul_pd(fscal,dx12);
1724 ty = _mm_mul_pd(fscal,dy12);
1725 tz = _mm_mul_pd(fscal,dz12);
1727 /* Update vectorial force */
1728 fix1 = _mm_add_pd(fix1,tx);
1729 fiy1 = _mm_add_pd(fiy1,ty);
1730 fiz1 = _mm_add_pd(fiz1,tz);
1732 fjx2 = _mm_add_pd(fjx2,tx);
1733 fjy2 = _mm_add_pd(fjy2,ty);
1734 fjz2 = _mm_add_pd(fjz2,tz);
1736 /**************************
1737 * CALCULATE INTERACTIONS *
1738 **************************/
1740 /* REACTION-FIELD ELECTROSTATICS */
1741 felec = _mm_mul_pd(qq20,_mm_sub_pd(_mm_mul_pd(rinv20,rinvsq20),krf2));
1745 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1747 /* Calculate temporary vectorial force */
1748 tx = _mm_mul_pd(fscal,dx20);
1749 ty = _mm_mul_pd(fscal,dy20);
1750 tz = _mm_mul_pd(fscal,dz20);
1752 /* Update vectorial force */
1753 fix2 = _mm_add_pd(fix2,tx);
1754 fiy2 = _mm_add_pd(fiy2,ty);
1755 fiz2 = _mm_add_pd(fiz2,tz);
1757 fjx0 = _mm_add_pd(fjx0,tx);
1758 fjy0 = _mm_add_pd(fjy0,ty);
1759 fjz0 = _mm_add_pd(fjz0,tz);
1761 /**************************
1762 * CALCULATE INTERACTIONS *
1763 **************************/
1765 /* REACTION-FIELD ELECTROSTATICS */
1766 felec = _mm_mul_pd(qq21,_mm_sub_pd(_mm_mul_pd(rinv21,rinvsq21),krf2));
1770 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1772 /* Calculate temporary vectorial force */
1773 tx = _mm_mul_pd(fscal,dx21);
1774 ty = _mm_mul_pd(fscal,dy21);
1775 tz = _mm_mul_pd(fscal,dz21);
1777 /* Update vectorial force */
1778 fix2 = _mm_add_pd(fix2,tx);
1779 fiy2 = _mm_add_pd(fiy2,ty);
1780 fiz2 = _mm_add_pd(fiz2,tz);
1782 fjx1 = _mm_add_pd(fjx1,tx);
1783 fjy1 = _mm_add_pd(fjy1,ty);
1784 fjz1 = _mm_add_pd(fjz1,tz);
1786 /**************************
1787 * CALCULATE INTERACTIONS *
1788 **************************/
1790 /* REACTION-FIELD ELECTROSTATICS */
1791 felec = _mm_mul_pd(qq22,_mm_sub_pd(_mm_mul_pd(rinv22,rinvsq22),krf2));
1795 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1797 /* Calculate temporary vectorial force */
1798 tx = _mm_mul_pd(fscal,dx22);
1799 ty = _mm_mul_pd(fscal,dy22);
1800 tz = _mm_mul_pd(fscal,dz22);
1802 /* Update vectorial force */
1803 fix2 = _mm_add_pd(fix2,tx);
1804 fiy2 = _mm_add_pd(fiy2,ty);
1805 fiz2 = _mm_add_pd(fiz2,tz);
1807 fjx2 = _mm_add_pd(fjx2,tx);
1808 fjy2 = _mm_add_pd(fjy2,ty);
1809 fjz2 = _mm_add_pd(fjz2,tz);
1811 gmx_mm_decrement_3rvec_1ptr_swizzle_pd(f+j_coord_offsetA,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1813 /* Inner loop uses 270 flops */
1816 /* End of innermost loop */
1818 gmx_mm_update_iforce_3atom_swizzle_pd(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1819 f+i_coord_offset,fshift+i_shift_offset);
1821 /* Increment number of inner iterations */
1822 inneriter += j_index_end - j_index_start;
1824 /* Outer loop uses 18 flops */
1827 /* Increment number of outer iterations */
1830 /* Update outer/inner flops */
1832 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_F,outeriter*18 + inneriter*270);