Merge release-4-6 into master
[alexxy/gromacs.git] / src / gromacs / gmxlib / nonbonded / nb_kernel_sse4_1_double / nb_kernel_ElecRF_VdwCSTab_GeomW3W3_sse4_1_double.c
1 /*
2  * Note: this file was generated by the Gromacs sse4_1_double kernel generator.
3  *
4  *                This source code is part of
5  *
6  *                 G   R   O   M   A   C   S
7  *
8  * Copyright (c) 2001-2012, The GROMACS Development Team
9  *
10  * Gromacs is a library for molecular simulation and trajectory analysis,
11  * written by Erik Lindahl, David van der Spoel, Berk Hess, and others - for
12  * a full list of developers and information, check out http://www.gromacs.org
13  *
14  * This program is free software; you can redistribute it and/or modify it under
15  * the terms of the GNU Lesser General Public License as published by the Free
16  * Software Foundation; either version 2 of the License, or (at your option) any
17  * later version.
18  *
19  * To help fund GROMACS development, we humbly ask that you cite
20  * the papers people have written on it - you can find them on the website.
21  */
22 #ifdef HAVE_CONFIG_H
23 #include <config.h>
24 #endif
25
26 #include <math.h>
27
28 #include "../nb_kernel.h"
29 #include "types/simple.h"
30 #include "vec.h"
31 #include "nrnb.h"
32
33 #include "gmx_math_x86_sse4_1_double.h"
34 #include "kernelutil_x86_sse4_1_double.h"
35
36 /*
37  * Gromacs nonbonded kernel:   nb_kernel_ElecRF_VdwCSTab_GeomW3W3_VF_sse4_1_double
38  * Electrostatics interaction: ReactionField
39  * VdW interaction:            CubicSplineTable
40  * Geometry:                   Water3-Water3
41  * Calculate force/pot:        PotentialAndForce
42  */
43 void
44 nb_kernel_ElecRF_VdwCSTab_GeomW3W3_VF_sse4_1_double
45                     (t_nblist * gmx_restrict                nlist,
46                      rvec * gmx_restrict                    xx,
47                      rvec * gmx_restrict                    ff,
48                      t_forcerec * gmx_restrict              fr,
49                      t_mdatoms * gmx_restrict               mdatoms,
50                      nb_kernel_data_t * gmx_restrict        kernel_data,
51                      t_nrnb * gmx_restrict                  nrnb)
52 {
53     /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
54      * just 0 for non-waters.
55      * Suffixes A,B refer to j loop unrolling done with SSE double precision, e.g. for the two different
56      * jnr indices corresponding to data put in the four positions in the SIMD register.
57      */
58     int              i_shift_offset,i_coord_offset,outeriter,inneriter;
59     int              j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
60     int              jnrA,jnrB;
61     int              j_coord_offsetA,j_coord_offsetB;
62     int              *iinr,*jindex,*jjnr,*shiftidx,*gid;
63     real             rcutoff_scalar;
64     real             *shiftvec,*fshift,*x,*f;
65     __m128d          tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
66     int              vdwioffset0;
67     __m128d          ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
68     int              vdwioffset1;
69     __m128d          ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
70     int              vdwioffset2;
71     __m128d          ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
72     int              vdwjidx0A,vdwjidx0B;
73     __m128d          jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
74     int              vdwjidx1A,vdwjidx1B;
75     __m128d          jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
76     int              vdwjidx2A,vdwjidx2B;
77     __m128d          jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
78     __m128d          dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
79     __m128d          dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
80     __m128d          dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
81     __m128d          dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
82     __m128d          dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
83     __m128d          dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
84     __m128d          dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
85     __m128d          dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
86     __m128d          dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
87     __m128d          velec,felec,velecsum,facel,crf,krf,krf2;
88     real             *charge;
89     int              nvdwtype;
90     __m128d          rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
91     int              *vdwtype;
92     real             *vdwparam;
93     __m128d          one_sixth   = _mm_set1_pd(1.0/6.0);
94     __m128d          one_twelfth = _mm_set1_pd(1.0/12.0);
95     __m128i          vfitab;
96     __m128i          ifour       = _mm_set1_epi32(4);
97     __m128d          rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
98     real             *vftab;
99     __m128d          dummy_mask,cutoff_mask;
100     __m128d          signbit   = gmx_mm_castsi128_pd( _mm_set_epi32(0x80000000,0x00000000,0x80000000,0x00000000) );
101     __m128d          one     = _mm_set1_pd(1.0);
102     __m128d          two     = _mm_set1_pd(2.0);
103     x                = xx[0];
104     f                = ff[0];
105
106     nri              = nlist->nri;
107     iinr             = nlist->iinr;
108     jindex           = nlist->jindex;
109     jjnr             = nlist->jjnr;
110     shiftidx         = nlist->shift;
111     gid              = nlist->gid;
112     shiftvec         = fr->shift_vec[0];
113     fshift           = fr->fshift[0];
114     facel            = _mm_set1_pd(fr->epsfac);
115     charge           = mdatoms->chargeA;
116     krf              = _mm_set1_pd(fr->ic->k_rf);
117     krf2             = _mm_set1_pd(fr->ic->k_rf*2.0);
118     crf              = _mm_set1_pd(fr->ic->c_rf);
119     nvdwtype         = fr->ntype;
120     vdwparam         = fr->nbfp;
121     vdwtype          = mdatoms->typeA;
122
123     vftab            = kernel_data->table_vdw->data;
124     vftabscale       = _mm_set1_pd(kernel_data->table_vdw->scale);
125
126     /* Setup water-specific parameters */
127     inr              = nlist->iinr[0];
128     iq0              = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+0]));
129     iq1              = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+1]));
130     iq2              = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+2]));
131     vdwioffset0      = 2*nvdwtype*vdwtype[inr+0];
132
133     jq0              = _mm_set1_pd(charge[inr+0]);
134     jq1              = _mm_set1_pd(charge[inr+1]);
135     jq2              = _mm_set1_pd(charge[inr+2]);
136     vdwjidx0A        = 2*vdwtype[inr+0];
137     qq00             = _mm_mul_pd(iq0,jq0);
138     c6_00            = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A]);
139     c12_00           = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A+1]);
140     qq01             = _mm_mul_pd(iq0,jq1);
141     qq02             = _mm_mul_pd(iq0,jq2);
142     qq10             = _mm_mul_pd(iq1,jq0);
143     qq11             = _mm_mul_pd(iq1,jq1);
144     qq12             = _mm_mul_pd(iq1,jq2);
145     qq20             = _mm_mul_pd(iq2,jq0);
146     qq21             = _mm_mul_pd(iq2,jq1);
147     qq22             = _mm_mul_pd(iq2,jq2);
148
149     /* Avoid stupid compiler warnings */
150     jnrA = jnrB = 0;
151     j_coord_offsetA = 0;
152     j_coord_offsetB = 0;
153
154     outeriter        = 0;
155     inneriter        = 0;
156
157     /* Start outer loop over neighborlists */
158     for(iidx=0; iidx<nri; iidx++)
159     {
160         /* Load shift vector for this list */
161         i_shift_offset   = DIM*shiftidx[iidx];
162
163         /* Load limits for loop over neighbors */
164         j_index_start    = jindex[iidx];
165         j_index_end      = jindex[iidx+1];
166
167         /* Get outer coordinate index */
168         inr              = iinr[iidx];
169         i_coord_offset   = DIM*inr;
170
171         /* Load i particle coords and add shift vector */
172         gmx_mm_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset,
173                                                  &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
174
175         fix0             = _mm_setzero_pd();
176         fiy0             = _mm_setzero_pd();
177         fiz0             = _mm_setzero_pd();
178         fix1             = _mm_setzero_pd();
179         fiy1             = _mm_setzero_pd();
180         fiz1             = _mm_setzero_pd();
181         fix2             = _mm_setzero_pd();
182         fiy2             = _mm_setzero_pd();
183         fiz2             = _mm_setzero_pd();
184
185         /* Reset potential sums */
186         velecsum         = _mm_setzero_pd();
187         vvdwsum          = _mm_setzero_pd();
188
189         /* Start inner kernel loop */
190         for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
191         {
192
193             /* Get j neighbor index, and coordinate index */
194             jnrA             = jjnr[jidx];
195             jnrB             = jjnr[jidx+1];
196             j_coord_offsetA  = DIM*jnrA;
197             j_coord_offsetB  = DIM*jnrB;
198
199             /* load j atom coordinates */
200             gmx_mm_load_3rvec_2ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
201                                               &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
202
203             /* Calculate displacement vector */
204             dx00             = _mm_sub_pd(ix0,jx0);
205             dy00             = _mm_sub_pd(iy0,jy0);
206             dz00             = _mm_sub_pd(iz0,jz0);
207             dx01             = _mm_sub_pd(ix0,jx1);
208             dy01             = _mm_sub_pd(iy0,jy1);
209             dz01             = _mm_sub_pd(iz0,jz1);
210             dx02             = _mm_sub_pd(ix0,jx2);
211             dy02             = _mm_sub_pd(iy0,jy2);
212             dz02             = _mm_sub_pd(iz0,jz2);
213             dx10             = _mm_sub_pd(ix1,jx0);
214             dy10             = _mm_sub_pd(iy1,jy0);
215             dz10             = _mm_sub_pd(iz1,jz0);
216             dx11             = _mm_sub_pd(ix1,jx1);
217             dy11             = _mm_sub_pd(iy1,jy1);
218             dz11             = _mm_sub_pd(iz1,jz1);
219             dx12             = _mm_sub_pd(ix1,jx2);
220             dy12             = _mm_sub_pd(iy1,jy2);
221             dz12             = _mm_sub_pd(iz1,jz2);
222             dx20             = _mm_sub_pd(ix2,jx0);
223             dy20             = _mm_sub_pd(iy2,jy0);
224             dz20             = _mm_sub_pd(iz2,jz0);
225             dx21             = _mm_sub_pd(ix2,jx1);
226             dy21             = _mm_sub_pd(iy2,jy1);
227             dz21             = _mm_sub_pd(iz2,jz1);
228             dx22             = _mm_sub_pd(ix2,jx2);
229             dy22             = _mm_sub_pd(iy2,jy2);
230             dz22             = _mm_sub_pd(iz2,jz2);
231
232             /* Calculate squared distance and things based on it */
233             rsq00            = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
234             rsq01            = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
235             rsq02            = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
236             rsq10            = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
237             rsq11            = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
238             rsq12            = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
239             rsq20            = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
240             rsq21            = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
241             rsq22            = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
242
243             rinv00           = gmx_mm_invsqrt_pd(rsq00);
244             rinv01           = gmx_mm_invsqrt_pd(rsq01);
245             rinv02           = gmx_mm_invsqrt_pd(rsq02);
246             rinv10           = gmx_mm_invsqrt_pd(rsq10);
247             rinv11           = gmx_mm_invsqrt_pd(rsq11);
248             rinv12           = gmx_mm_invsqrt_pd(rsq12);
249             rinv20           = gmx_mm_invsqrt_pd(rsq20);
250             rinv21           = gmx_mm_invsqrt_pd(rsq21);
251             rinv22           = gmx_mm_invsqrt_pd(rsq22);
252
253             rinvsq00         = _mm_mul_pd(rinv00,rinv00);
254             rinvsq01         = _mm_mul_pd(rinv01,rinv01);
255             rinvsq02         = _mm_mul_pd(rinv02,rinv02);
256             rinvsq10         = _mm_mul_pd(rinv10,rinv10);
257             rinvsq11         = _mm_mul_pd(rinv11,rinv11);
258             rinvsq12         = _mm_mul_pd(rinv12,rinv12);
259             rinvsq20         = _mm_mul_pd(rinv20,rinv20);
260             rinvsq21         = _mm_mul_pd(rinv21,rinv21);
261             rinvsq22         = _mm_mul_pd(rinv22,rinv22);
262
263             fjx0             = _mm_setzero_pd();
264             fjy0             = _mm_setzero_pd();
265             fjz0             = _mm_setzero_pd();
266             fjx1             = _mm_setzero_pd();
267             fjy1             = _mm_setzero_pd();
268             fjz1             = _mm_setzero_pd();
269             fjx2             = _mm_setzero_pd();
270             fjy2             = _mm_setzero_pd();
271             fjz2             = _mm_setzero_pd();
272
273             /**************************
274              * CALCULATE INTERACTIONS *
275              **************************/
276
277             r00              = _mm_mul_pd(rsq00,rinv00);
278
279             /* Calculate table index by multiplying r with table scale and truncate to integer */
280             rt               = _mm_mul_pd(r00,vftabscale);
281             vfitab           = _mm_cvttpd_epi32(rt);
282             vfeps            = _mm_sub_pd(rt,_mm_round_pd(rt, _MM_FROUND_FLOOR));
283             vfitab           = _mm_slli_epi32(vfitab,3);
284
285             /* REACTION-FIELD ELECTROSTATICS */
286             velec            = _mm_mul_pd(qq00,_mm_sub_pd(_mm_add_pd(rinv00,_mm_mul_pd(krf,rsq00)),crf));
287             felec            = _mm_mul_pd(qq00,_mm_sub_pd(_mm_mul_pd(rinv00,rinvsq00),krf2));
288
289             /* CUBIC SPLINE TABLE DISPERSION */
290             Y                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) );
291             F                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,1) );
292             GMX_MM_TRANSPOSE2_PD(Y,F);
293             G                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) +2);
294             H                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,1) +2);
295             GMX_MM_TRANSPOSE2_PD(G,H);
296             Heps             = _mm_mul_pd(vfeps,H);
297             Fp               = _mm_add_pd(F,_mm_mul_pd(vfeps,_mm_add_pd(G,Heps)));
298             VV               = _mm_add_pd(Y,_mm_mul_pd(vfeps,Fp));
299             vvdw6            = _mm_mul_pd(c6_00,VV);
300             FF               = _mm_add_pd(Fp,_mm_mul_pd(vfeps,_mm_add_pd(G,_mm_add_pd(Heps,Heps))));
301             fvdw6            = _mm_mul_pd(c6_00,FF);
302
303             /* CUBIC SPLINE TABLE REPULSION */
304             vfitab           = _mm_add_epi32(vfitab,ifour);
305             Y                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) );
306             F                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,1) );
307             GMX_MM_TRANSPOSE2_PD(Y,F);
308             G                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) +2);
309             H                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,1) +2);
310             GMX_MM_TRANSPOSE2_PD(G,H);
311             Heps             = _mm_mul_pd(vfeps,H);
312             Fp               = _mm_add_pd(F,_mm_mul_pd(vfeps,_mm_add_pd(G,Heps)));
313             VV               = _mm_add_pd(Y,_mm_mul_pd(vfeps,Fp));
314             vvdw12           = _mm_mul_pd(c12_00,VV);
315             FF               = _mm_add_pd(Fp,_mm_mul_pd(vfeps,_mm_add_pd(G,_mm_add_pd(Heps,Heps))));
316             fvdw12           = _mm_mul_pd(c12_00,FF);
317             vvdw             = _mm_add_pd(vvdw12,vvdw6);
318             fvdw             = _mm_xor_pd(signbit,_mm_mul_pd(_mm_add_pd(fvdw6,fvdw12),_mm_mul_pd(vftabscale,rinv00)));
319
320             /* Update potential sum for this i atom from the interaction with this j atom. */
321             velecsum         = _mm_add_pd(velecsum,velec);
322             vvdwsum          = _mm_add_pd(vvdwsum,vvdw);
323
324             fscal            = _mm_add_pd(felec,fvdw);
325
326             /* Calculate temporary vectorial force */
327             tx               = _mm_mul_pd(fscal,dx00);
328             ty               = _mm_mul_pd(fscal,dy00);
329             tz               = _mm_mul_pd(fscal,dz00);
330
331             /* Update vectorial force */
332             fix0             = _mm_add_pd(fix0,tx);
333             fiy0             = _mm_add_pd(fiy0,ty);
334             fiz0             = _mm_add_pd(fiz0,tz);
335
336             fjx0             = _mm_add_pd(fjx0,tx);
337             fjy0             = _mm_add_pd(fjy0,ty);
338             fjz0             = _mm_add_pd(fjz0,tz);
339
340             /**************************
341              * CALCULATE INTERACTIONS *
342              **************************/
343
344             /* REACTION-FIELD ELECTROSTATICS */
345             velec            = _mm_mul_pd(qq01,_mm_sub_pd(_mm_add_pd(rinv01,_mm_mul_pd(krf,rsq01)),crf));
346             felec            = _mm_mul_pd(qq01,_mm_sub_pd(_mm_mul_pd(rinv01,rinvsq01),krf2));
347
348             /* Update potential sum for this i atom from the interaction with this j atom. */
349             velecsum         = _mm_add_pd(velecsum,velec);
350
351             fscal            = felec;
352
353             /* Calculate temporary vectorial force */
354             tx               = _mm_mul_pd(fscal,dx01);
355             ty               = _mm_mul_pd(fscal,dy01);
356             tz               = _mm_mul_pd(fscal,dz01);
357
358             /* Update vectorial force */
359             fix0             = _mm_add_pd(fix0,tx);
360             fiy0             = _mm_add_pd(fiy0,ty);
361             fiz0             = _mm_add_pd(fiz0,tz);
362
363             fjx1             = _mm_add_pd(fjx1,tx);
364             fjy1             = _mm_add_pd(fjy1,ty);
365             fjz1             = _mm_add_pd(fjz1,tz);
366
367             /**************************
368              * CALCULATE INTERACTIONS *
369              **************************/
370
371             /* REACTION-FIELD ELECTROSTATICS */
372             velec            = _mm_mul_pd(qq02,_mm_sub_pd(_mm_add_pd(rinv02,_mm_mul_pd(krf,rsq02)),crf));
373             felec            = _mm_mul_pd(qq02,_mm_sub_pd(_mm_mul_pd(rinv02,rinvsq02),krf2));
374
375             /* Update potential sum for this i atom from the interaction with this j atom. */
376             velecsum         = _mm_add_pd(velecsum,velec);
377
378             fscal            = felec;
379
380             /* Calculate temporary vectorial force */
381             tx               = _mm_mul_pd(fscal,dx02);
382             ty               = _mm_mul_pd(fscal,dy02);
383             tz               = _mm_mul_pd(fscal,dz02);
384
385             /* Update vectorial force */
386             fix0             = _mm_add_pd(fix0,tx);
387             fiy0             = _mm_add_pd(fiy0,ty);
388             fiz0             = _mm_add_pd(fiz0,tz);
389
390             fjx2             = _mm_add_pd(fjx2,tx);
391             fjy2             = _mm_add_pd(fjy2,ty);
392             fjz2             = _mm_add_pd(fjz2,tz);
393
394             /**************************
395              * CALCULATE INTERACTIONS *
396              **************************/
397
398             /* REACTION-FIELD ELECTROSTATICS */
399             velec            = _mm_mul_pd(qq10,_mm_sub_pd(_mm_add_pd(rinv10,_mm_mul_pd(krf,rsq10)),crf));
400             felec            = _mm_mul_pd(qq10,_mm_sub_pd(_mm_mul_pd(rinv10,rinvsq10),krf2));
401
402             /* Update potential sum for this i atom from the interaction with this j atom. */
403             velecsum         = _mm_add_pd(velecsum,velec);
404
405             fscal            = felec;
406
407             /* Calculate temporary vectorial force */
408             tx               = _mm_mul_pd(fscal,dx10);
409             ty               = _mm_mul_pd(fscal,dy10);
410             tz               = _mm_mul_pd(fscal,dz10);
411
412             /* Update vectorial force */
413             fix1             = _mm_add_pd(fix1,tx);
414             fiy1             = _mm_add_pd(fiy1,ty);
415             fiz1             = _mm_add_pd(fiz1,tz);
416
417             fjx0             = _mm_add_pd(fjx0,tx);
418             fjy0             = _mm_add_pd(fjy0,ty);
419             fjz0             = _mm_add_pd(fjz0,tz);
420
421             /**************************
422              * CALCULATE INTERACTIONS *
423              **************************/
424
425             /* REACTION-FIELD ELECTROSTATICS */
426             velec            = _mm_mul_pd(qq11,_mm_sub_pd(_mm_add_pd(rinv11,_mm_mul_pd(krf,rsq11)),crf));
427             felec            = _mm_mul_pd(qq11,_mm_sub_pd(_mm_mul_pd(rinv11,rinvsq11),krf2));
428
429             /* Update potential sum for this i atom from the interaction with this j atom. */
430             velecsum         = _mm_add_pd(velecsum,velec);
431
432             fscal            = felec;
433
434             /* Calculate temporary vectorial force */
435             tx               = _mm_mul_pd(fscal,dx11);
436             ty               = _mm_mul_pd(fscal,dy11);
437             tz               = _mm_mul_pd(fscal,dz11);
438
439             /* Update vectorial force */
440             fix1             = _mm_add_pd(fix1,tx);
441             fiy1             = _mm_add_pd(fiy1,ty);
442             fiz1             = _mm_add_pd(fiz1,tz);
443
444             fjx1             = _mm_add_pd(fjx1,tx);
445             fjy1             = _mm_add_pd(fjy1,ty);
446             fjz1             = _mm_add_pd(fjz1,tz);
447
448             /**************************
449              * CALCULATE INTERACTIONS *
450              **************************/
451
452             /* REACTION-FIELD ELECTROSTATICS */
453             velec            = _mm_mul_pd(qq12,_mm_sub_pd(_mm_add_pd(rinv12,_mm_mul_pd(krf,rsq12)),crf));
454             felec            = _mm_mul_pd(qq12,_mm_sub_pd(_mm_mul_pd(rinv12,rinvsq12),krf2));
455
456             /* Update potential sum for this i atom from the interaction with this j atom. */
457             velecsum         = _mm_add_pd(velecsum,velec);
458
459             fscal            = felec;
460
461             /* Calculate temporary vectorial force */
462             tx               = _mm_mul_pd(fscal,dx12);
463             ty               = _mm_mul_pd(fscal,dy12);
464             tz               = _mm_mul_pd(fscal,dz12);
465
466             /* Update vectorial force */
467             fix1             = _mm_add_pd(fix1,tx);
468             fiy1             = _mm_add_pd(fiy1,ty);
469             fiz1             = _mm_add_pd(fiz1,tz);
470
471             fjx2             = _mm_add_pd(fjx2,tx);
472             fjy2             = _mm_add_pd(fjy2,ty);
473             fjz2             = _mm_add_pd(fjz2,tz);
474
475             /**************************
476              * CALCULATE INTERACTIONS *
477              **************************/
478
479             /* REACTION-FIELD ELECTROSTATICS */
480             velec            = _mm_mul_pd(qq20,_mm_sub_pd(_mm_add_pd(rinv20,_mm_mul_pd(krf,rsq20)),crf));
481             felec            = _mm_mul_pd(qq20,_mm_sub_pd(_mm_mul_pd(rinv20,rinvsq20),krf2));
482
483             /* Update potential sum for this i atom from the interaction with this j atom. */
484             velecsum         = _mm_add_pd(velecsum,velec);
485
486             fscal            = felec;
487
488             /* Calculate temporary vectorial force */
489             tx               = _mm_mul_pd(fscal,dx20);
490             ty               = _mm_mul_pd(fscal,dy20);
491             tz               = _mm_mul_pd(fscal,dz20);
492
493             /* Update vectorial force */
494             fix2             = _mm_add_pd(fix2,tx);
495             fiy2             = _mm_add_pd(fiy2,ty);
496             fiz2             = _mm_add_pd(fiz2,tz);
497
498             fjx0             = _mm_add_pd(fjx0,tx);
499             fjy0             = _mm_add_pd(fjy0,ty);
500             fjz0             = _mm_add_pd(fjz0,tz);
501
502             /**************************
503              * CALCULATE INTERACTIONS *
504              **************************/
505
506             /* REACTION-FIELD ELECTROSTATICS */
507             velec            = _mm_mul_pd(qq21,_mm_sub_pd(_mm_add_pd(rinv21,_mm_mul_pd(krf,rsq21)),crf));
508             felec            = _mm_mul_pd(qq21,_mm_sub_pd(_mm_mul_pd(rinv21,rinvsq21),krf2));
509
510             /* Update potential sum for this i atom from the interaction with this j atom. */
511             velecsum         = _mm_add_pd(velecsum,velec);
512
513             fscal            = felec;
514
515             /* Calculate temporary vectorial force */
516             tx               = _mm_mul_pd(fscal,dx21);
517             ty               = _mm_mul_pd(fscal,dy21);
518             tz               = _mm_mul_pd(fscal,dz21);
519
520             /* Update vectorial force */
521             fix2             = _mm_add_pd(fix2,tx);
522             fiy2             = _mm_add_pd(fiy2,ty);
523             fiz2             = _mm_add_pd(fiz2,tz);
524
525             fjx1             = _mm_add_pd(fjx1,tx);
526             fjy1             = _mm_add_pd(fjy1,ty);
527             fjz1             = _mm_add_pd(fjz1,tz);
528
529             /**************************
530              * CALCULATE INTERACTIONS *
531              **************************/
532
533             /* REACTION-FIELD ELECTROSTATICS */
534             velec            = _mm_mul_pd(qq22,_mm_sub_pd(_mm_add_pd(rinv22,_mm_mul_pd(krf,rsq22)),crf));
535             felec            = _mm_mul_pd(qq22,_mm_sub_pd(_mm_mul_pd(rinv22,rinvsq22),krf2));
536
537             /* Update potential sum for this i atom from the interaction with this j atom. */
538             velecsum         = _mm_add_pd(velecsum,velec);
539
540             fscal            = felec;
541
542             /* Calculate temporary vectorial force */
543             tx               = _mm_mul_pd(fscal,dx22);
544             ty               = _mm_mul_pd(fscal,dy22);
545             tz               = _mm_mul_pd(fscal,dz22);
546
547             /* Update vectorial force */
548             fix2             = _mm_add_pd(fix2,tx);
549             fiy2             = _mm_add_pd(fiy2,ty);
550             fiz2             = _mm_add_pd(fiz2,tz);
551
552             fjx2             = _mm_add_pd(fjx2,tx);
553             fjy2             = _mm_add_pd(fjy2,ty);
554             fjz2             = _mm_add_pd(fjz2,tz);
555
556             gmx_mm_decrement_3rvec_2ptr_swizzle_pd(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
557
558             /* Inner loop uses 323 flops */
559         }
560
561         if(jidx<j_index_end)
562         {
563
564             jnrA             = jjnr[jidx];
565             j_coord_offsetA  = DIM*jnrA;
566
567             /* load j atom coordinates */
568             gmx_mm_load_3rvec_1ptr_swizzle_pd(x+j_coord_offsetA,
569                                               &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
570
571             /* Calculate displacement vector */
572             dx00             = _mm_sub_pd(ix0,jx0);
573             dy00             = _mm_sub_pd(iy0,jy0);
574             dz00             = _mm_sub_pd(iz0,jz0);
575             dx01             = _mm_sub_pd(ix0,jx1);
576             dy01             = _mm_sub_pd(iy0,jy1);
577             dz01             = _mm_sub_pd(iz0,jz1);
578             dx02             = _mm_sub_pd(ix0,jx2);
579             dy02             = _mm_sub_pd(iy0,jy2);
580             dz02             = _mm_sub_pd(iz0,jz2);
581             dx10             = _mm_sub_pd(ix1,jx0);
582             dy10             = _mm_sub_pd(iy1,jy0);
583             dz10             = _mm_sub_pd(iz1,jz0);
584             dx11             = _mm_sub_pd(ix1,jx1);
585             dy11             = _mm_sub_pd(iy1,jy1);
586             dz11             = _mm_sub_pd(iz1,jz1);
587             dx12             = _mm_sub_pd(ix1,jx2);
588             dy12             = _mm_sub_pd(iy1,jy2);
589             dz12             = _mm_sub_pd(iz1,jz2);
590             dx20             = _mm_sub_pd(ix2,jx0);
591             dy20             = _mm_sub_pd(iy2,jy0);
592             dz20             = _mm_sub_pd(iz2,jz0);
593             dx21             = _mm_sub_pd(ix2,jx1);
594             dy21             = _mm_sub_pd(iy2,jy1);
595             dz21             = _mm_sub_pd(iz2,jz1);
596             dx22             = _mm_sub_pd(ix2,jx2);
597             dy22             = _mm_sub_pd(iy2,jy2);
598             dz22             = _mm_sub_pd(iz2,jz2);
599
600             /* Calculate squared distance and things based on it */
601             rsq00            = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
602             rsq01            = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
603             rsq02            = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
604             rsq10            = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
605             rsq11            = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
606             rsq12            = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
607             rsq20            = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
608             rsq21            = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
609             rsq22            = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
610
611             rinv00           = gmx_mm_invsqrt_pd(rsq00);
612             rinv01           = gmx_mm_invsqrt_pd(rsq01);
613             rinv02           = gmx_mm_invsqrt_pd(rsq02);
614             rinv10           = gmx_mm_invsqrt_pd(rsq10);
615             rinv11           = gmx_mm_invsqrt_pd(rsq11);
616             rinv12           = gmx_mm_invsqrt_pd(rsq12);
617             rinv20           = gmx_mm_invsqrt_pd(rsq20);
618             rinv21           = gmx_mm_invsqrt_pd(rsq21);
619             rinv22           = gmx_mm_invsqrt_pd(rsq22);
620
621             rinvsq00         = _mm_mul_pd(rinv00,rinv00);
622             rinvsq01         = _mm_mul_pd(rinv01,rinv01);
623             rinvsq02         = _mm_mul_pd(rinv02,rinv02);
624             rinvsq10         = _mm_mul_pd(rinv10,rinv10);
625             rinvsq11         = _mm_mul_pd(rinv11,rinv11);
626             rinvsq12         = _mm_mul_pd(rinv12,rinv12);
627             rinvsq20         = _mm_mul_pd(rinv20,rinv20);
628             rinvsq21         = _mm_mul_pd(rinv21,rinv21);
629             rinvsq22         = _mm_mul_pd(rinv22,rinv22);
630
631             fjx0             = _mm_setzero_pd();
632             fjy0             = _mm_setzero_pd();
633             fjz0             = _mm_setzero_pd();
634             fjx1             = _mm_setzero_pd();
635             fjy1             = _mm_setzero_pd();
636             fjz1             = _mm_setzero_pd();
637             fjx2             = _mm_setzero_pd();
638             fjy2             = _mm_setzero_pd();
639             fjz2             = _mm_setzero_pd();
640
641             /**************************
642              * CALCULATE INTERACTIONS *
643              **************************/
644
645             r00              = _mm_mul_pd(rsq00,rinv00);
646
647             /* Calculate table index by multiplying r with table scale and truncate to integer */
648             rt               = _mm_mul_pd(r00,vftabscale);
649             vfitab           = _mm_cvttpd_epi32(rt);
650             vfeps            = _mm_sub_pd(rt,_mm_round_pd(rt, _MM_FROUND_FLOOR));
651             vfitab           = _mm_slli_epi32(vfitab,3);
652
653             /* REACTION-FIELD ELECTROSTATICS */
654             velec            = _mm_mul_pd(qq00,_mm_sub_pd(_mm_add_pd(rinv00,_mm_mul_pd(krf,rsq00)),crf));
655             felec            = _mm_mul_pd(qq00,_mm_sub_pd(_mm_mul_pd(rinv00,rinvsq00),krf2));
656
657             /* CUBIC SPLINE TABLE DISPERSION */
658             Y                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) );
659             F                = _mm_setzero_pd();
660             GMX_MM_TRANSPOSE2_PD(Y,F);
661             G                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) +2);
662             H                = _mm_setzero_pd();
663             GMX_MM_TRANSPOSE2_PD(G,H);
664             Heps             = _mm_mul_pd(vfeps,H);
665             Fp               = _mm_add_pd(F,_mm_mul_pd(vfeps,_mm_add_pd(G,Heps)));
666             VV               = _mm_add_pd(Y,_mm_mul_pd(vfeps,Fp));
667             vvdw6            = _mm_mul_pd(c6_00,VV);
668             FF               = _mm_add_pd(Fp,_mm_mul_pd(vfeps,_mm_add_pd(G,_mm_add_pd(Heps,Heps))));
669             fvdw6            = _mm_mul_pd(c6_00,FF);
670
671             /* CUBIC SPLINE TABLE REPULSION */
672             vfitab           = _mm_add_epi32(vfitab,ifour);
673             Y                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) );
674             F                = _mm_setzero_pd();
675             GMX_MM_TRANSPOSE2_PD(Y,F);
676             G                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) +2);
677             H                = _mm_setzero_pd();
678             GMX_MM_TRANSPOSE2_PD(G,H);
679             Heps             = _mm_mul_pd(vfeps,H);
680             Fp               = _mm_add_pd(F,_mm_mul_pd(vfeps,_mm_add_pd(G,Heps)));
681             VV               = _mm_add_pd(Y,_mm_mul_pd(vfeps,Fp));
682             vvdw12           = _mm_mul_pd(c12_00,VV);
683             FF               = _mm_add_pd(Fp,_mm_mul_pd(vfeps,_mm_add_pd(G,_mm_add_pd(Heps,Heps))));
684             fvdw12           = _mm_mul_pd(c12_00,FF);
685             vvdw             = _mm_add_pd(vvdw12,vvdw6);
686             fvdw             = _mm_xor_pd(signbit,_mm_mul_pd(_mm_add_pd(fvdw6,fvdw12),_mm_mul_pd(vftabscale,rinv00)));
687
688             /* Update potential sum for this i atom from the interaction with this j atom. */
689             velec            = _mm_unpacklo_pd(velec,_mm_setzero_pd());
690             velecsum         = _mm_add_pd(velecsum,velec);
691             vvdw             = _mm_unpacklo_pd(vvdw,_mm_setzero_pd());
692             vvdwsum          = _mm_add_pd(vvdwsum,vvdw);
693
694             fscal            = _mm_add_pd(felec,fvdw);
695
696             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
697
698             /* Calculate temporary vectorial force */
699             tx               = _mm_mul_pd(fscal,dx00);
700             ty               = _mm_mul_pd(fscal,dy00);
701             tz               = _mm_mul_pd(fscal,dz00);
702
703             /* Update vectorial force */
704             fix0             = _mm_add_pd(fix0,tx);
705             fiy0             = _mm_add_pd(fiy0,ty);
706             fiz0             = _mm_add_pd(fiz0,tz);
707
708             fjx0             = _mm_add_pd(fjx0,tx);
709             fjy0             = _mm_add_pd(fjy0,ty);
710             fjz0             = _mm_add_pd(fjz0,tz);
711
712             /**************************
713              * CALCULATE INTERACTIONS *
714              **************************/
715
716             /* REACTION-FIELD ELECTROSTATICS */
717             velec            = _mm_mul_pd(qq01,_mm_sub_pd(_mm_add_pd(rinv01,_mm_mul_pd(krf,rsq01)),crf));
718             felec            = _mm_mul_pd(qq01,_mm_sub_pd(_mm_mul_pd(rinv01,rinvsq01),krf2));
719
720             /* Update potential sum for this i atom from the interaction with this j atom. */
721             velec            = _mm_unpacklo_pd(velec,_mm_setzero_pd());
722             velecsum         = _mm_add_pd(velecsum,velec);
723
724             fscal            = felec;
725
726             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
727
728             /* Calculate temporary vectorial force */
729             tx               = _mm_mul_pd(fscal,dx01);
730             ty               = _mm_mul_pd(fscal,dy01);
731             tz               = _mm_mul_pd(fscal,dz01);
732
733             /* Update vectorial force */
734             fix0             = _mm_add_pd(fix0,tx);
735             fiy0             = _mm_add_pd(fiy0,ty);
736             fiz0             = _mm_add_pd(fiz0,tz);
737
738             fjx1             = _mm_add_pd(fjx1,tx);
739             fjy1             = _mm_add_pd(fjy1,ty);
740             fjz1             = _mm_add_pd(fjz1,tz);
741
742             /**************************
743              * CALCULATE INTERACTIONS *
744              **************************/
745
746             /* REACTION-FIELD ELECTROSTATICS */
747             velec            = _mm_mul_pd(qq02,_mm_sub_pd(_mm_add_pd(rinv02,_mm_mul_pd(krf,rsq02)),crf));
748             felec            = _mm_mul_pd(qq02,_mm_sub_pd(_mm_mul_pd(rinv02,rinvsq02),krf2));
749
750             /* Update potential sum for this i atom from the interaction with this j atom. */
751             velec            = _mm_unpacklo_pd(velec,_mm_setzero_pd());
752             velecsum         = _mm_add_pd(velecsum,velec);
753
754             fscal            = felec;
755
756             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
757
758             /* Calculate temporary vectorial force */
759             tx               = _mm_mul_pd(fscal,dx02);
760             ty               = _mm_mul_pd(fscal,dy02);
761             tz               = _mm_mul_pd(fscal,dz02);
762
763             /* Update vectorial force */
764             fix0             = _mm_add_pd(fix0,tx);
765             fiy0             = _mm_add_pd(fiy0,ty);
766             fiz0             = _mm_add_pd(fiz0,tz);
767
768             fjx2             = _mm_add_pd(fjx2,tx);
769             fjy2             = _mm_add_pd(fjy2,ty);
770             fjz2             = _mm_add_pd(fjz2,tz);
771
772             /**************************
773              * CALCULATE INTERACTIONS *
774              **************************/
775
776             /* REACTION-FIELD ELECTROSTATICS */
777             velec            = _mm_mul_pd(qq10,_mm_sub_pd(_mm_add_pd(rinv10,_mm_mul_pd(krf,rsq10)),crf));
778             felec            = _mm_mul_pd(qq10,_mm_sub_pd(_mm_mul_pd(rinv10,rinvsq10),krf2));
779
780             /* Update potential sum for this i atom from the interaction with this j atom. */
781             velec            = _mm_unpacklo_pd(velec,_mm_setzero_pd());
782             velecsum         = _mm_add_pd(velecsum,velec);
783
784             fscal            = felec;
785
786             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
787
788             /* Calculate temporary vectorial force */
789             tx               = _mm_mul_pd(fscal,dx10);
790             ty               = _mm_mul_pd(fscal,dy10);
791             tz               = _mm_mul_pd(fscal,dz10);
792
793             /* Update vectorial force */
794             fix1             = _mm_add_pd(fix1,tx);
795             fiy1             = _mm_add_pd(fiy1,ty);
796             fiz1             = _mm_add_pd(fiz1,tz);
797
798             fjx0             = _mm_add_pd(fjx0,tx);
799             fjy0             = _mm_add_pd(fjy0,ty);
800             fjz0             = _mm_add_pd(fjz0,tz);
801
802             /**************************
803              * CALCULATE INTERACTIONS *
804              **************************/
805
806             /* REACTION-FIELD ELECTROSTATICS */
807             velec            = _mm_mul_pd(qq11,_mm_sub_pd(_mm_add_pd(rinv11,_mm_mul_pd(krf,rsq11)),crf));
808             felec            = _mm_mul_pd(qq11,_mm_sub_pd(_mm_mul_pd(rinv11,rinvsq11),krf2));
809
810             /* Update potential sum for this i atom from the interaction with this j atom. */
811             velec            = _mm_unpacklo_pd(velec,_mm_setzero_pd());
812             velecsum         = _mm_add_pd(velecsum,velec);
813
814             fscal            = felec;
815
816             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
817
818             /* Calculate temporary vectorial force */
819             tx               = _mm_mul_pd(fscal,dx11);
820             ty               = _mm_mul_pd(fscal,dy11);
821             tz               = _mm_mul_pd(fscal,dz11);
822
823             /* Update vectorial force */
824             fix1             = _mm_add_pd(fix1,tx);
825             fiy1             = _mm_add_pd(fiy1,ty);
826             fiz1             = _mm_add_pd(fiz1,tz);
827
828             fjx1             = _mm_add_pd(fjx1,tx);
829             fjy1             = _mm_add_pd(fjy1,ty);
830             fjz1             = _mm_add_pd(fjz1,tz);
831
832             /**************************
833              * CALCULATE INTERACTIONS *
834              **************************/
835
836             /* REACTION-FIELD ELECTROSTATICS */
837             velec            = _mm_mul_pd(qq12,_mm_sub_pd(_mm_add_pd(rinv12,_mm_mul_pd(krf,rsq12)),crf));
838             felec            = _mm_mul_pd(qq12,_mm_sub_pd(_mm_mul_pd(rinv12,rinvsq12),krf2));
839
840             /* Update potential sum for this i atom from the interaction with this j atom. */
841             velec            = _mm_unpacklo_pd(velec,_mm_setzero_pd());
842             velecsum         = _mm_add_pd(velecsum,velec);
843
844             fscal            = felec;
845
846             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
847
848             /* Calculate temporary vectorial force */
849             tx               = _mm_mul_pd(fscal,dx12);
850             ty               = _mm_mul_pd(fscal,dy12);
851             tz               = _mm_mul_pd(fscal,dz12);
852
853             /* Update vectorial force */
854             fix1             = _mm_add_pd(fix1,tx);
855             fiy1             = _mm_add_pd(fiy1,ty);
856             fiz1             = _mm_add_pd(fiz1,tz);
857
858             fjx2             = _mm_add_pd(fjx2,tx);
859             fjy2             = _mm_add_pd(fjy2,ty);
860             fjz2             = _mm_add_pd(fjz2,tz);
861
862             /**************************
863              * CALCULATE INTERACTIONS *
864              **************************/
865
866             /* REACTION-FIELD ELECTROSTATICS */
867             velec            = _mm_mul_pd(qq20,_mm_sub_pd(_mm_add_pd(rinv20,_mm_mul_pd(krf,rsq20)),crf));
868             felec            = _mm_mul_pd(qq20,_mm_sub_pd(_mm_mul_pd(rinv20,rinvsq20),krf2));
869
870             /* Update potential sum for this i atom from the interaction with this j atom. */
871             velec            = _mm_unpacklo_pd(velec,_mm_setzero_pd());
872             velecsum         = _mm_add_pd(velecsum,velec);
873
874             fscal            = felec;
875
876             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
877
878             /* Calculate temporary vectorial force */
879             tx               = _mm_mul_pd(fscal,dx20);
880             ty               = _mm_mul_pd(fscal,dy20);
881             tz               = _mm_mul_pd(fscal,dz20);
882
883             /* Update vectorial force */
884             fix2             = _mm_add_pd(fix2,tx);
885             fiy2             = _mm_add_pd(fiy2,ty);
886             fiz2             = _mm_add_pd(fiz2,tz);
887
888             fjx0             = _mm_add_pd(fjx0,tx);
889             fjy0             = _mm_add_pd(fjy0,ty);
890             fjz0             = _mm_add_pd(fjz0,tz);
891
892             /**************************
893              * CALCULATE INTERACTIONS *
894              **************************/
895
896             /* REACTION-FIELD ELECTROSTATICS */
897             velec            = _mm_mul_pd(qq21,_mm_sub_pd(_mm_add_pd(rinv21,_mm_mul_pd(krf,rsq21)),crf));
898             felec            = _mm_mul_pd(qq21,_mm_sub_pd(_mm_mul_pd(rinv21,rinvsq21),krf2));
899
900             /* Update potential sum for this i atom from the interaction with this j atom. */
901             velec            = _mm_unpacklo_pd(velec,_mm_setzero_pd());
902             velecsum         = _mm_add_pd(velecsum,velec);
903
904             fscal            = felec;
905
906             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
907
908             /* Calculate temporary vectorial force */
909             tx               = _mm_mul_pd(fscal,dx21);
910             ty               = _mm_mul_pd(fscal,dy21);
911             tz               = _mm_mul_pd(fscal,dz21);
912
913             /* Update vectorial force */
914             fix2             = _mm_add_pd(fix2,tx);
915             fiy2             = _mm_add_pd(fiy2,ty);
916             fiz2             = _mm_add_pd(fiz2,tz);
917
918             fjx1             = _mm_add_pd(fjx1,tx);
919             fjy1             = _mm_add_pd(fjy1,ty);
920             fjz1             = _mm_add_pd(fjz1,tz);
921
922             /**************************
923              * CALCULATE INTERACTIONS *
924              **************************/
925
926             /* REACTION-FIELD ELECTROSTATICS */
927             velec            = _mm_mul_pd(qq22,_mm_sub_pd(_mm_add_pd(rinv22,_mm_mul_pd(krf,rsq22)),crf));
928             felec            = _mm_mul_pd(qq22,_mm_sub_pd(_mm_mul_pd(rinv22,rinvsq22),krf2));
929
930             /* Update potential sum for this i atom from the interaction with this j atom. */
931             velec            = _mm_unpacklo_pd(velec,_mm_setzero_pd());
932             velecsum         = _mm_add_pd(velecsum,velec);
933
934             fscal            = felec;
935
936             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
937
938             /* Calculate temporary vectorial force */
939             tx               = _mm_mul_pd(fscal,dx22);
940             ty               = _mm_mul_pd(fscal,dy22);
941             tz               = _mm_mul_pd(fscal,dz22);
942
943             /* Update vectorial force */
944             fix2             = _mm_add_pd(fix2,tx);
945             fiy2             = _mm_add_pd(fiy2,ty);
946             fiz2             = _mm_add_pd(fiz2,tz);
947
948             fjx2             = _mm_add_pd(fjx2,tx);
949             fjy2             = _mm_add_pd(fjy2,ty);
950             fjz2             = _mm_add_pd(fjz2,tz);
951
952             gmx_mm_decrement_3rvec_1ptr_swizzle_pd(f+j_coord_offsetA,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
953
954             /* Inner loop uses 323 flops */
955         }
956
957         /* End of innermost loop */
958
959         gmx_mm_update_iforce_3atom_swizzle_pd(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
960                                               f+i_coord_offset,fshift+i_shift_offset);
961
962         ggid                        = gid[iidx];
963         /* Update potential energies */
964         gmx_mm_update_1pot_pd(velecsum,kernel_data->energygrp_elec+ggid);
965         gmx_mm_update_1pot_pd(vvdwsum,kernel_data->energygrp_vdw+ggid);
966
967         /* Increment number of inner iterations */
968         inneriter                  += j_index_end - j_index_start;
969
970         /* Outer loop uses 20 flops */
971     }
972
973     /* Increment number of outer iterations */
974     outeriter        += nri;
975
976     /* Update outer/inner flops */
977
978     inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_VF,outeriter*20 + inneriter*323);
979 }
980 /*
981  * Gromacs nonbonded kernel:   nb_kernel_ElecRF_VdwCSTab_GeomW3W3_F_sse4_1_double
982  * Electrostatics interaction: ReactionField
983  * VdW interaction:            CubicSplineTable
984  * Geometry:                   Water3-Water3
985  * Calculate force/pot:        Force
986  */
987 void
988 nb_kernel_ElecRF_VdwCSTab_GeomW3W3_F_sse4_1_double
989                     (t_nblist * gmx_restrict                nlist,
990                      rvec * gmx_restrict                    xx,
991                      rvec * gmx_restrict                    ff,
992                      t_forcerec * gmx_restrict              fr,
993                      t_mdatoms * gmx_restrict               mdatoms,
994                      nb_kernel_data_t * gmx_restrict        kernel_data,
995                      t_nrnb * gmx_restrict                  nrnb)
996 {
997     /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
998      * just 0 for non-waters.
999      * Suffixes A,B refer to j loop unrolling done with SSE double precision, e.g. for the two different
1000      * jnr indices corresponding to data put in the four positions in the SIMD register.
1001      */
1002     int              i_shift_offset,i_coord_offset,outeriter,inneriter;
1003     int              j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1004     int              jnrA,jnrB;
1005     int              j_coord_offsetA,j_coord_offsetB;
1006     int              *iinr,*jindex,*jjnr,*shiftidx,*gid;
1007     real             rcutoff_scalar;
1008     real             *shiftvec,*fshift,*x,*f;
1009     __m128d          tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
1010     int              vdwioffset0;
1011     __m128d          ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
1012     int              vdwioffset1;
1013     __m128d          ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1014     int              vdwioffset2;
1015     __m128d          ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1016     int              vdwjidx0A,vdwjidx0B;
1017     __m128d          jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
1018     int              vdwjidx1A,vdwjidx1B;
1019     __m128d          jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1020     int              vdwjidx2A,vdwjidx2B;
1021     __m128d          jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1022     __m128d          dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
1023     __m128d          dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
1024     __m128d          dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
1025     __m128d          dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
1026     __m128d          dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1027     __m128d          dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1028     __m128d          dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
1029     __m128d          dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1030     __m128d          dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1031     __m128d          velec,felec,velecsum,facel,crf,krf,krf2;
1032     real             *charge;
1033     int              nvdwtype;
1034     __m128d          rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
1035     int              *vdwtype;
1036     real             *vdwparam;
1037     __m128d          one_sixth   = _mm_set1_pd(1.0/6.0);
1038     __m128d          one_twelfth = _mm_set1_pd(1.0/12.0);
1039     __m128i          vfitab;
1040     __m128i          ifour       = _mm_set1_epi32(4);
1041     __m128d          rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
1042     real             *vftab;
1043     __m128d          dummy_mask,cutoff_mask;
1044     __m128d          signbit   = gmx_mm_castsi128_pd( _mm_set_epi32(0x80000000,0x00000000,0x80000000,0x00000000) );
1045     __m128d          one     = _mm_set1_pd(1.0);
1046     __m128d          two     = _mm_set1_pd(2.0);
1047     x                = xx[0];
1048     f                = ff[0];
1049
1050     nri              = nlist->nri;
1051     iinr             = nlist->iinr;
1052     jindex           = nlist->jindex;
1053     jjnr             = nlist->jjnr;
1054     shiftidx         = nlist->shift;
1055     gid              = nlist->gid;
1056     shiftvec         = fr->shift_vec[0];
1057     fshift           = fr->fshift[0];
1058     facel            = _mm_set1_pd(fr->epsfac);
1059     charge           = mdatoms->chargeA;
1060     krf              = _mm_set1_pd(fr->ic->k_rf);
1061     krf2             = _mm_set1_pd(fr->ic->k_rf*2.0);
1062     crf              = _mm_set1_pd(fr->ic->c_rf);
1063     nvdwtype         = fr->ntype;
1064     vdwparam         = fr->nbfp;
1065     vdwtype          = mdatoms->typeA;
1066
1067     vftab            = kernel_data->table_vdw->data;
1068     vftabscale       = _mm_set1_pd(kernel_data->table_vdw->scale);
1069
1070     /* Setup water-specific parameters */
1071     inr              = nlist->iinr[0];
1072     iq0              = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+0]));
1073     iq1              = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+1]));
1074     iq2              = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+2]));
1075     vdwioffset0      = 2*nvdwtype*vdwtype[inr+0];
1076
1077     jq0              = _mm_set1_pd(charge[inr+0]);
1078     jq1              = _mm_set1_pd(charge[inr+1]);
1079     jq2              = _mm_set1_pd(charge[inr+2]);
1080     vdwjidx0A        = 2*vdwtype[inr+0];
1081     qq00             = _mm_mul_pd(iq0,jq0);
1082     c6_00            = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A]);
1083     c12_00           = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A+1]);
1084     qq01             = _mm_mul_pd(iq0,jq1);
1085     qq02             = _mm_mul_pd(iq0,jq2);
1086     qq10             = _mm_mul_pd(iq1,jq0);
1087     qq11             = _mm_mul_pd(iq1,jq1);
1088     qq12             = _mm_mul_pd(iq1,jq2);
1089     qq20             = _mm_mul_pd(iq2,jq0);
1090     qq21             = _mm_mul_pd(iq2,jq1);
1091     qq22             = _mm_mul_pd(iq2,jq2);
1092
1093     /* Avoid stupid compiler warnings */
1094     jnrA = jnrB = 0;
1095     j_coord_offsetA = 0;
1096     j_coord_offsetB = 0;
1097
1098     outeriter        = 0;
1099     inneriter        = 0;
1100
1101     /* Start outer loop over neighborlists */
1102     for(iidx=0; iidx<nri; iidx++)
1103     {
1104         /* Load shift vector for this list */
1105         i_shift_offset   = DIM*shiftidx[iidx];
1106
1107         /* Load limits for loop over neighbors */
1108         j_index_start    = jindex[iidx];
1109         j_index_end      = jindex[iidx+1];
1110
1111         /* Get outer coordinate index */
1112         inr              = iinr[iidx];
1113         i_coord_offset   = DIM*inr;
1114
1115         /* Load i particle coords and add shift vector */
1116         gmx_mm_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset,
1117                                                  &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
1118
1119         fix0             = _mm_setzero_pd();
1120         fiy0             = _mm_setzero_pd();
1121         fiz0             = _mm_setzero_pd();
1122         fix1             = _mm_setzero_pd();
1123         fiy1             = _mm_setzero_pd();
1124         fiz1             = _mm_setzero_pd();
1125         fix2             = _mm_setzero_pd();
1126         fiy2             = _mm_setzero_pd();
1127         fiz2             = _mm_setzero_pd();
1128
1129         /* Start inner kernel loop */
1130         for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
1131         {
1132
1133             /* Get j neighbor index, and coordinate index */
1134             jnrA             = jjnr[jidx];
1135             jnrB             = jjnr[jidx+1];
1136             j_coord_offsetA  = DIM*jnrA;
1137             j_coord_offsetB  = DIM*jnrB;
1138
1139             /* load j atom coordinates */
1140             gmx_mm_load_3rvec_2ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
1141                                               &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1142
1143             /* Calculate displacement vector */
1144             dx00             = _mm_sub_pd(ix0,jx0);
1145             dy00             = _mm_sub_pd(iy0,jy0);
1146             dz00             = _mm_sub_pd(iz0,jz0);
1147             dx01             = _mm_sub_pd(ix0,jx1);
1148             dy01             = _mm_sub_pd(iy0,jy1);
1149             dz01             = _mm_sub_pd(iz0,jz1);
1150             dx02             = _mm_sub_pd(ix0,jx2);
1151             dy02             = _mm_sub_pd(iy0,jy2);
1152             dz02             = _mm_sub_pd(iz0,jz2);
1153             dx10             = _mm_sub_pd(ix1,jx0);
1154             dy10             = _mm_sub_pd(iy1,jy0);
1155             dz10             = _mm_sub_pd(iz1,jz0);
1156             dx11             = _mm_sub_pd(ix1,jx1);
1157             dy11             = _mm_sub_pd(iy1,jy1);
1158             dz11             = _mm_sub_pd(iz1,jz1);
1159             dx12             = _mm_sub_pd(ix1,jx2);
1160             dy12             = _mm_sub_pd(iy1,jy2);
1161             dz12             = _mm_sub_pd(iz1,jz2);
1162             dx20             = _mm_sub_pd(ix2,jx0);
1163             dy20             = _mm_sub_pd(iy2,jy0);
1164             dz20             = _mm_sub_pd(iz2,jz0);
1165             dx21             = _mm_sub_pd(ix2,jx1);
1166             dy21             = _mm_sub_pd(iy2,jy1);
1167             dz21             = _mm_sub_pd(iz2,jz1);
1168             dx22             = _mm_sub_pd(ix2,jx2);
1169             dy22             = _mm_sub_pd(iy2,jy2);
1170             dz22             = _mm_sub_pd(iz2,jz2);
1171
1172             /* Calculate squared distance and things based on it */
1173             rsq00            = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
1174             rsq01            = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
1175             rsq02            = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
1176             rsq10            = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
1177             rsq11            = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
1178             rsq12            = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
1179             rsq20            = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
1180             rsq21            = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
1181             rsq22            = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
1182
1183             rinv00           = gmx_mm_invsqrt_pd(rsq00);
1184             rinv01           = gmx_mm_invsqrt_pd(rsq01);
1185             rinv02           = gmx_mm_invsqrt_pd(rsq02);
1186             rinv10           = gmx_mm_invsqrt_pd(rsq10);
1187             rinv11           = gmx_mm_invsqrt_pd(rsq11);
1188             rinv12           = gmx_mm_invsqrt_pd(rsq12);
1189             rinv20           = gmx_mm_invsqrt_pd(rsq20);
1190             rinv21           = gmx_mm_invsqrt_pd(rsq21);
1191             rinv22           = gmx_mm_invsqrt_pd(rsq22);
1192
1193             rinvsq00         = _mm_mul_pd(rinv00,rinv00);
1194             rinvsq01         = _mm_mul_pd(rinv01,rinv01);
1195             rinvsq02         = _mm_mul_pd(rinv02,rinv02);
1196             rinvsq10         = _mm_mul_pd(rinv10,rinv10);
1197             rinvsq11         = _mm_mul_pd(rinv11,rinv11);
1198             rinvsq12         = _mm_mul_pd(rinv12,rinv12);
1199             rinvsq20         = _mm_mul_pd(rinv20,rinv20);
1200             rinvsq21         = _mm_mul_pd(rinv21,rinv21);
1201             rinvsq22         = _mm_mul_pd(rinv22,rinv22);
1202
1203             fjx0             = _mm_setzero_pd();
1204             fjy0             = _mm_setzero_pd();
1205             fjz0             = _mm_setzero_pd();
1206             fjx1             = _mm_setzero_pd();
1207             fjy1             = _mm_setzero_pd();
1208             fjz1             = _mm_setzero_pd();
1209             fjx2             = _mm_setzero_pd();
1210             fjy2             = _mm_setzero_pd();
1211             fjz2             = _mm_setzero_pd();
1212
1213             /**************************
1214              * CALCULATE INTERACTIONS *
1215              **************************/
1216
1217             r00              = _mm_mul_pd(rsq00,rinv00);
1218
1219             /* Calculate table index by multiplying r with table scale and truncate to integer */
1220             rt               = _mm_mul_pd(r00,vftabscale);
1221             vfitab           = _mm_cvttpd_epi32(rt);
1222             vfeps            = _mm_sub_pd(rt,_mm_round_pd(rt, _MM_FROUND_FLOOR));
1223             vfitab           = _mm_slli_epi32(vfitab,3);
1224
1225             /* REACTION-FIELD ELECTROSTATICS */
1226             felec            = _mm_mul_pd(qq00,_mm_sub_pd(_mm_mul_pd(rinv00,rinvsq00),krf2));
1227
1228             /* CUBIC SPLINE TABLE DISPERSION */
1229             Y                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) );
1230             F                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,1) );
1231             GMX_MM_TRANSPOSE2_PD(Y,F);
1232             G                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) +2);
1233             H                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,1) +2);
1234             GMX_MM_TRANSPOSE2_PD(G,H);
1235             Heps             = _mm_mul_pd(vfeps,H);
1236             Fp               = _mm_add_pd(F,_mm_mul_pd(vfeps,_mm_add_pd(G,Heps)));
1237             FF               = _mm_add_pd(Fp,_mm_mul_pd(vfeps,_mm_add_pd(G,_mm_add_pd(Heps,Heps))));
1238             fvdw6            = _mm_mul_pd(c6_00,FF);
1239
1240             /* CUBIC SPLINE TABLE REPULSION */
1241             vfitab           = _mm_add_epi32(vfitab,ifour);
1242             Y                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) );
1243             F                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,1) );
1244             GMX_MM_TRANSPOSE2_PD(Y,F);
1245             G                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) +2);
1246             H                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,1) +2);
1247             GMX_MM_TRANSPOSE2_PD(G,H);
1248             Heps             = _mm_mul_pd(vfeps,H);
1249             Fp               = _mm_add_pd(F,_mm_mul_pd(vfeps,_mm_add_pd(G,Heps)));
1250             FF               = _mm_add_pd(Fp,_mm_mul_pd(vfeps,_mm_add_pd(G,_mm_add_pd(Heps,Heps))));
1251             fvdw12           = _mm_mul_pd(c12_00,FF);
1252             fvdw             = _mm_xor_pd(signbit,_mm_mul_pd(_mm_add_pd(fvdw6,fvdw12),_mm_mul_pd(vftabscale,rinv00)));
1253
1254             fscal            = _mm_add_pd(felec,fvdw);
1255
1256             /* Calculate temporary vectorial force */
1257             tx               = _mm_mul_pd(fscal,dx00);
1258             ty               = _mm_mul_pd(fscal,dy00);
1259             tz               = _mm_mul_pd(fscal,dz00);
1260
1261             /* Update vectorial force */
1262             fix0             = _mm_add_pd(fix0,tx);
1263             fiy0             = _mm_add_pd(fiy0,ty);
1264             fiz0             = _mm_add_pd(fiz0,tz);
1265
1266             fjx0             = _mm_add_pd(fjx0,tx);
1267             fjy0             = _mm_add_pd(fjy0,ty);
1268             fjz0             = _mm_add_pd(fjz0,tz);
1269
1270             /**************************
1271              * CALCULATE INTERACTIONS *
1272              **************************/
1273
1274             /* REACTION-FIELD ELECTROSTATICS */
1275             felec            = _mm_mul_pd(qq01,_mm_sub_pd(_mm_mul_pd(rinv01,rinvsq01),krf2));
1276
1277             fscal            = felec;
1278
1279             /* Calculate temporary vectorial force */
1280             tx               = _mm_mul_pd(fscal,dx01);
1281             ty               = _mm_mul_pd(fscal,dy01);
1282             tz               = _mm_mul_pd(fscal,dz01);
1283
1284             /* Update vectorial force */
1285             fix0             = _mm_add_pd(fix0,tx);
1286             fiy0             = _mm_add_pd(fiy0,ty);
1287             fiz0             = _mm_add_pd(fiz0,tz);
1288
1289             fjx1             = _mm_add_pd(fjx1,tx);
1290             fjy1             = _mm_add_pd(fjy1,ty);
1291             fjz1             = _mm_add_pd(fjz1,tz);
1292
1293             /**************************
1294              * CALCULATE INTERACTIONS *
1295              **************************/
1296
1297             /* REACTION-FIELD ELECTROSTATICS */
1298             felec            = _mm_mul_pd(qq02,_mm_sub_pd(_mm_mul_pd(rinv02,rinvsq02),krf2));
1299
1300             fscal            = felec;
1301
1302             /* Calculate temporary vectorial force */
1303             tx               = _mm_mul_pd(fscal,dx02);
1304             ty               = _mm_mul_pd(fscal,dy02);
1305             tz               = _mm_mul_pd(fscal,dz02);
1306
1307             /* Update vectorial force */
1308             fix0             = _mm_add_pd(fix0,tx);
1309             fiy0             = _mm_add_pd(fiy0,ty);
1310             fiz0             = _mm_add_pd(fiz0,tz);
1311
1312             fjx2             = _mm_add_pd(fjx2,tx);
1313             fjy2             = _mm_add_pd(fjy2,ty);
1314             fjz2             = _mm_add_pd(fjz2,tz);
1315
1316             /**************************
1317              * CALCULATE INTERACTIONS *
1318              **************************/
1319
1320             /* REACTION-FIELD ELECTROSTATICS */
1321             felec            = _mm_mul_pd(qq10,_mm_sub_pd(_mm_mul_pd(rinv10,rinvsq10),krf2));
1322
1323             fscal            = felec;
1324
1325             /* Calculate temporary vectorial force */
1326             tx               = _mm_mul_pd(fscal,dx10);
1327             ty               = _mm_mul_pd(fscal,dy10);
1328             tz               = _mm_mul_pd(fscal,dz10);
1329
1330             /* Update vectorial force */
1331             fix1             = _mm_add_pd(fix1,tx);
1332             fiy1             = _mm_add_pd(fiy1,ty);
1333             fiz1             = _mm_add_pd(fiz1,tz);
1334
1335             fjx0             = _mm_add_pd(fjx0,tx);
1336             fjy0             = _mm_add_pd(fjy0,ty);
1337             fjz0             = _mm_add_pd(fjz0,tz);
1338
1339             /**************************
1340              * CALCULATE INTERACTIONS *
1341              **************************/
1342
1343             /* REACTION-FIELD ELECTROSTATICS */
1344             felec            = _mm_mul_pd(qq11,_mm_sub_pd(_mm_mul_pd(rinv11,rinvsq11),krf2));
1345
1346             fscal            = felec;
1347
1348             /* Calculate temporary vectorial force */
1349             tx               = _mm_mul_pd(fscal,dx11);
1350             ty               = _mm_mul_pd(fscal,dy11);
1351             tz               = _mm_mul_pd(fscal,dz11);
1352
1353             /* Update vectorial force */
1354             fix1             = _mm_add_pd(fix1,tx);
1355             fiy1             = _mm_add_pd(fiy1,ty);
1356             fiz1             = _mm_add_pd(fiz1,tz);
1357
1358             fjx1             = _mm_add_pd(fjx1,tx);
1359             fjy1             = _mm_add_pd(fjy1,ty);
1360             fjz1             = _mm_add_pd(fjz1,tz);
1361
1362             /**************************
1363              * CALCULATE INTERACTIONS *
1364              **************************/
1365
1366             /* REACTION-FIELD ELECTROSTATICS */
1367             felec            = _mm_mul_pd(qq12,_mm_sub_pd(_mm_mul_pd(rinv12,rinvsq12),krf2));
1368
1369             fscal            = felec;
1370
1371             /* Calculate temporary vectorial force */
1372             tx               = _mm_mul_pd(fscal,dx12);
1373             ty               = _mm_mul_pd(fscal,dy12);
1374             tz               = _mm_mul_pd(fscal,dz12);
1375
1376             /* Update vectorial force */
1377             fix1             = _mm_add_pd(fix1,tx);
1378             fiy1             = _mm_add_pd(fiy1,ty);
1379             fiz1             = _mm_add_pd(fiz1,tz);
1380
1381             fjx2             = _mm_add_pd(fjx2,tx);
1382             fjy2             = _mm_add_pd(fjy2,ty);
1383             fjz2             = _mm_add_pd(fjz2,tz);
1384
1385             /**************************
1386              * CALCULATE INTERACTIONS *
1387              **************************/
1388
1389             /* REACTION-FIELD ELECTROSTATICS */
1390             felec            = _mm_mul_pd(qq20,_mm_sub_pd(_mm_mul_pd(rinv20,rinvsq20),krf2));
1391
1392             fscal            = felec;
1393
1394             /* Calculate temporary vectorial force */
1395             tx               = _mm_mul_pd(fscal,dx20);
1396             ty               = _mm_mul_pd(fscal,dy20);
1397             tz               = _mm_mul_pd(fscal,dz20);
1398
1399             /* Update vectorial force */
1400             fix2             = _mm_add_pd(fix2,tx);
1401             fiy2             = _mm_add_pd(fiy2,ty);
1402             fiz2             = _mm_add_pd(fiz2,tz);
1403
1404             fjx0             = _mm_add_pd(fjx0,tx);
1405             fjy0             = _mm_add_pd(fjy0,ty);
1406             fjz0             = _mm_add_pd(fjz0,tz);
1407
1408             /**************************
1409              * CALCULATE INTERACTIONS *
1410              **************************/
1411
1412             /* REACTION-FIELD ELECTROSTATICS */
1413             felec            = _mm_mul_pd(qq21,_mm_sub_pd(_mm_mul_pd(rinv21,rinvsq21),krf2));
1414
1415             fscal            = felec;
1416
1417             /* Calculate temporary vectorial force */
1418             tx               = _mm_mul_pd(fscal,dx21);
1419             ty               = _mm_mul_pd(fscal,dy21);
1420             tz               = _mm_mul_pd(fscal,dz21);
1421
1422             /* Update vectorial force */
1423             fix2             = _mm_add_pd(fix2,tx);
1424             fiy2             = _mm_add_pd(fiy2,ty);
1425             fiz2             = _mm_add_pd(fiz2,tz);
1426
1427             fjx1             = _mm_add_pd(fjx1,tx);
1428             fjy1             = _mm_add_pd(fjy1,ty);
1429             fjz1             = _mm_add_pd(fjz1,tz);
1430
1431             /**************************
1432              * CALCULATE INTERACTIONS *
1433              **************************/
1434
1435             /* REACTION-FIELD ELECTROSTATICS */
1436             felec            = _mm_mul_pd(qq22,_mm_sub_pd(_mm_mul_pd(rinv22,rinvsq22),krf2));
1437
1438             fscal            = felec;
1439
1440             /* Calculate temporary vectorial force */
1441             tx               = _mm_mul_pd(fscal,dx22);
1442             ty               = _mm_mul_pd(fscal,dy22);
1443             tz               = _mm_mul_pd(fscal,dz22);
1444
1445             /* Update vectorial force */
1446             fix2             = _mm_add_pd(fix2,tx);
1447             fiy2             = _mm_add_pd(fiy2,ty);
1448             fiz2             = _mm_add_pd(fiz2,tz);
1449
1450             fjx2             = _mm_add_pd(fjx2,tx);
1451             fjy2             = _mm_add_pd(fjy2,ty);
1452             fjz2             = _mm_add_pd(fjz2,tz);
1453
1454             gmx_mm_decrement_3rvec_2ptr_swizzle_pd(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1455
1456             /* Inner loop uses 270 flops */
1457         }
1458
1459         if(jidx<j_index_end)
1460         {
1461
1462             jnrA             = jjnr[jidx];
1463             j_coord_offsetA  = DIM*jnrA;
1464
1465             /* load j atom coordinates */
1466             gmx_mm_load_3rvec_1ptr_swizzle_pd(x+j_coord_offsetA,
1467                                               &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1468
1469             /* Calculate displacement vector */
1470             dx00             = _mm_sub_pd(ix0,jx0);
1471             dy00             = _mm_sub_pd(iy0,jy0);
1472             dz00             = _mm_sub_pd(iz0,jz0);
1473             dx01             = _mm_sub_pd(ix0,jx1);
1474             dy01             = _mm_sub_pd(iy0,jy1);
1475             dz01             = _mm_sub_pd(iz0,jz1);
1476             dx02             = _mm_sub_pd(ix0,jx2);
1477             dy02             = _mm_sub_pd(iy0,jy2);
1478             dz02             = _mm_sub_pd(iz0,jz2);
1479             dx10             = _mm_sub_pd(ix1,jx0);
1480             dy10             = _mm_sub_pd(iy1,jy0);
1481             dz10             = _mm_sub_pd(iz1,jz0);
1482             dx11             = _mm_sub_pd(ix1,jx1);
1483             dy11             = _mm_sub_pd(iy1,jy1);
1484             dz11             = _mm_sub_pd(iz1,jz1);
1485             dx12             = _mm_sub_pd(ix1,jx2);
1486             dy12             = _mm_sub_pd(iy1,jy2);
1487             dz12             = _mm_sub_pd(iz1,jz2);
1488             dx20             = _mm_sub_pd(ix2,jx0);
1489             dy20             = _mm_sub_pd(iy2,jy0);
1490             dz20             = _mm_sub_pd(iz2,jz0);
1491             dx21             = _mm_sub_pd(ix2,jx1);
1492             dy21             = _mm_sub_pd(iy2,jy1);
1493             dz21             = _mm_sub_pd(iz2,jz1);
1494             dx22             = _mm_sub_pd(ix2,jx2);
1495             dy22             = _mm_sub_pd(iy2,jy2);
1496             dz22             = _mm_sub_pd(iz2,jz2);
1497
1498             /* Calculate squared distance and things based on it */
1499             rsq00            = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
1500             rsq01            = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
1501             rsq02            = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
1502             rsq10            = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
1503             rsq11            = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
1504             rsq12            = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
1505             rsq20            = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
1506             rsq21            = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
1507             rsq22            = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
1508
1509             rinv00           = gmx_mm_invsqrt_pd(rsq00);
1510             rinv01           = gmx_mm_invsqrt_pd(rsq01);
1511             rinv02           = gmx_mm_invsqrt_pd(rsq02);
1512             rinv10           = gmx_mm_invsqrt_pd(rsq10);
1513             rinv11           = gmx_mm_invsqrt_pd(rsq11);
1514             rinv12           = gmx_mm_invsqrt_pd(rsq12);
1515             rinv20           = gmx_mm_invsqrt_pd(rsq20);
1516             rinv21           = gmx_mm_invsqrt_pd(rsq21);
1517             rinv22           = gmx_mm_invsqrt_pd(rsq22);
1518
1519             rinvsq00         = _mm_mul_pd(rinv00,rinv00);
1520             rinvsq01         = _mm_mul_pd(rinv01,rinv01);
1521             rinvsq02         = _mm_mul_pd(rinv02,rinv02);
1522             rinvsq10         = _mm_mul_pd(rinv10,rinv10);
1523             rinvsq11         = _mm_mul_pd(rinv11,rinv11);
1524             rinvsq12         = _mm_mul_pd(rinv12,rinv12);
1525             rinvsq20         = _mm_mul_pd(rinv20,rinv20);
1526             rinvsq21         = _mm_mul_pd(rinv21,rinv21);
1527             rinvsq22         = _mm_mul_pd(rinv22,rinv22);
1528
1529             fjx0             = _mm_setzero_pd();
1530             fjy0             = _mm_setzero_pd();
1531             fjz0             = _mm_setzero_pd();
1532             fjx1             = _mm_setzero_pd();
1533             fjy1             = _mm_setzero_pd();
1534             fjz1             = _mm_setzero_pd();
1535             fjx2             = _mm_setzero_pd();
1536             fjy2             = _mm_setzero_pd();
1537             fjz2             = _mm_setzero_pd();
1538
1539             /**************************
1540              * CALCULATE INTERACTIONS *
1541              **************************/
1542
1543             r00              = _mm_mul_pd(rsq00,rinv00);
1544
1545             /* Calculate table index by multiplying r with table scale and truncate to integer */
1546             rt               = _mm_mul_pd(r00,vftabscale);
1547             vfitab           = _mm_cvttpd_epi32(rt);
1548             vfeps            = _mm_sub_pd(rt,_mm_round_pd(rt, _MM_FROUND_FLOOR));
1549             vfitab           = _mm_slli_epi32(vfitab,3);
1550
1551             /* REACTION-FIELD ELECTROSTATICS */
1552             felec            = _mm_mul_pd(qq00,_mm_sub_pd(_mm_mul_pd(rinv00,rinvsq00),krf2));
1553
1554             /* CUBIC SPLINE TABLE DISPERSION */
1555             Y                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) );
1556             F                = _mm_setzero_pd();
1557             GMX_MM_TRANSPOSE2_PD(Y,F);
1558             G                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) +2);
1559             H                = _mm_setzero_pd();
1560             GMX_MM_TRANSPOSE2_PD(G,H);
1561             Heps             = _mm_mul_pd(vfeps,H);
1562             Fp               = _mm_add_pd(F,_mm_mul_pd(vfeps,_mm_add_pd(G,Heps)));
1563             FF               = _mm_add_pd(Fp,_mm_mul_pd(vfeps,_mm_add_pd(G,_mm_add_pd(Heps,Heps))));
1564             fvdw6            = _mm_mul_pd(c6_00,FF);
1565
1566             /* CUBIC SPLINE TABLE REPULSION */
1567             vfitab           = _mm_add_epi32(vfitab,ifour);
1568             Y                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) );
1569             F                = _mm_setzero_pd();
1570             GMX_MM_TRANSPOSE2_PD(Y,F);
1571             G                = _mm_load_pd( vftab + gmx_mm_extract_epi32(vfitab,0) +2);
1572             H                = _mm_setzero_pd();
1573             GMX_MM_TRANSPOSE2_PD(G,H);
1574             Heps             = _mm_mul_pd(vfeps,H);
1575             Fp               = _mm_add_pd(F,_mm_mul_pd(vfeps,_mm_add_pd(G,Heps)));
1576             FF               = _mm_add_pd(Fp,_mm_mul_pd(vfeps,_mm_add_pd(G,_mm_add_pd(Heps,Heps))));
1577             fvdw12           = _mm_mul_pd(c12_00,FF);
1578             fvdw             = _mm_xor_pd(signbit,_mm_mul_pd(_mm_add_pd(fvdw6,fvdw12),_mm_mul_pd(vftabscale,rinv00)));
1579
1580             fscal            = _mm_add_pd(felec,fvdw);
1581
1582             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1583
1584             /* Calculate temporary vectorial force */
1585             tx               = _mm_mul_pd(fscal,dx00);
1586             ty               = _mm_mul_pd(fscal,dy00);
1587             tz               = _mm_mul_pd(fscal,dz00);
1588
1589             /* Update vectorial force */
1590             fix0             = _mm_add_pd(fix0,tx);
1591             fiy0             = _mm_add_pd(fiy0,ty);
1592             fiz0             = _mm_add_pd(fiz0,tz);
1593
1594             fjx0             = _mm_add_pd(fjx0,tx);
1595             fjy0             = _mm_add_pd(fjy0,ty);
1596             fjz0             = _mm_add_pd(fjz0,tz);
1597
1598             /**************************
1599              * CALCULATE INTERACTIONS *
1600              **************************/
1601
1602             /* REACTION-FIELD ELECTROSTATICS */
1603             felec            = _mm_mul_pd(qq01,_mm_sub_pd(_mm_mul_pd(rinv01,rinvsq01),krf2));
1604
1605             fscal            = felec;
1606
1607             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1608
1609             /* Calculate temporary vectorial force */
1610             tx               = _mm_mul_pd(fscal,dx01);
1611             ty               = _mm_mul_pd(fscal,dy01);
1612             tz               = _mm_mul_pd(fscal,dz01);
1613
1614             /* Update vectorial force */
1615             fix0             = _mm_add_pd(fix0,tx);
1616             fiy0             = _mm_add_pd(fiy0,ty);
1617             fiz0             = _mm_add_pd(fiz0,tz);
1618
1619             fjx1             = _mm_add_pd(fjx1,tx);
1620             fjy1             = _mm_add_pd(fjy1,ty);
1621             fjz1             = _mm_add_pd(fjz1,tz);
1622
1623             /**************************
1624              * CALCULATE INTERACTIONS *
1625              **************************/
1626
1627             /* REACTION-FIELD ELECTROSTATICS */
1628             felec            = _mm_mul_pd(qq02,_mm_sub_pd(_mm_mul_pd(rinv02,rinvsq02),krf2));
1629
1630             fscal            = felec;
1631
1632             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1633
1634             /* Calculate temporary vectorial force */
1635             tx               = _mm_mul_pd(fscal,dx02);
1636             ty               = _mm_mul_pd(fscal,dy02);
1637             tz               = _mm_mul_pd(fscal,dz02);
1638
1639             /* Update vectorial force */
1640             fix0             = _mm_add_pd(fix0,tx);
1641             fiy0             = _mm_add_pd(fiy0,ty);
1642             fiz0             = _mm_add_pd(fiz0,tz);
1643
1644             fjx2             = _mm_add_pd(fjx2,tx);
1645             fjy2             = _mm_add_pd(fjy2,ty);
1646             fjz2             = _mm_add_pd(fjz2,tz);
1647
1648             /**************************
1649              * CALCULATE INTERACTIONS *
1650              **************************/
1651
1652             /* REACTION-FIELD ELECTROSTATICS */
1653             felec            = _mm_mul_pd(qq10,_mm_sub_pd(_mm_mul_pd(rinv10,rinvsq10),krf2));
1654
1655             fscal            = felec;
1656
1657             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1658
1659             /* Calculate temporary vectorial force */
1660             tx               = _mm_mul_pd(fscal,dx10);
1661             ty               = _mm_mul_pd(fscal,dy10);
1662             tz               = _mm_mul_pd(fscal,dz10);
1663
1664             /* Update vectorial force */
1665             fix1             = _mm_add_pd(fix1,tx);
1666             fiy1             = _mm_add_pd(fiy1,ty);
1667             fiz1             = _mm_add_pd(fiz1,tz);
1668
1669             fjx0             = _mm_add_pd(fjx0,tx);
1670             fjy0             = _mm_add_pd(fjy0,ty);
1671             fjz0             = _mm_add_pd(fjz0,tz);
1672
1673             /**************************
1674              * CALCULATE INTERACTIONS *
1675              **************************/
1676
1677             /* REACTION-FIELD ELECTROSTATICS */
1678             felec            = _mm_mul_pd(qq11,_mm_sub_pd(_mm_mul_pd(rinv11,rinvsq11),krf2));
1679
1680             fscal            = felec;
1681
1682             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1683
1684             /* Calculate temporary vectorial force */
1685             tx               = _mm_mul_pd(fscal,dx11);
1686             ty               = _mm_mul_pd(fscal,dy11);
1687             tz               = _mm_mul_pd(fscal,dz11);
1688
1689             /* Update vectorial force */
1690             fix1             = _mm_add_pd(fix1,tx);
1691             fiy1             = _mm_add_pd(fiy1,ty);
1692             fiz1             = _mm_add_pd(fiz1,tz);
1693
1694             fjx1             = _mm_add_pd(fjx1,tx);
1695             fjy1             = _mm_add_pd(fjy1,ty);
1696             fjz1             = _mm_add_pd(fjz1,tz);
1697
1698             /**************************
1699              * CALCULATE INTERACTIONS *
1700              **************************/
1701
1702             /* REACTION-FIELD ELECTROSTATICS */
1703             felec            = _mm_mul_pd(qq12,_mm_sub_pd(_mm_mul_pd(rinv12,rinvsq12),krf2));
1704
1705             fscal            = felec;
1706
1707             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1708
1709             /* Calculate temporary vectorial force */
1710             tx               = _mm_mul_pd(fscal,dx12);
1711             ty               = _mm_mul_pd(fscal,dy12);
1712             tz               = _mm_mul_pd(fscal,dz12);
1713
1714             /* Update vectorial force */
1715             fix1             = _mm_add_pd(fix1,tx);
1716             fiy1             = _mm_add_pd(fiy1,ty);
1717             fiz1             = _mm_add_pd(fiz1,tz);
1718
1719             fjx2             = _mm_add_pd(fjx2,tx);
1720             fjy2             = _mm_add_pd(fjy2,ty);
1721             fjz2             = _mm_add_pd(fjz2,tz);
1722
1723             /**************************
1724              * CALCULATE INTERACTIONS *
1725              **************************/
1726
1727             /* REACTION-FIELD ELECTROSTATICS */
1728             felec            = _mm_mul_pd(qq20,_mm_sub_pd(_mm_mul_pd(rinv20,rinvsq20),krf2));
1729
1730             fscal            = felec;
1731
1732             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1733
1734             /* Calculate temporary vectorial force */
1735             tx               = _mm_mul_pd(fscal,dx20);
1736             ty               = _mm_mul_pd(fscal,dy20);
1737             tz               = _mm_mul_pd(fscal,dz20);
1738
1739             /* Update vectorial force */
1740             fix2             = _mm_add_pd(fix2,tx);
1741             fiy2             = _mm_add_pd(fiy2,ty);
1742             fiz2             = _mm_add_pd(fiz2,tz);
1743
1744             fjx0             = _mm_add_pd(fjx0,tx);
1745             fjy0             = _mm_add_pd(fjy0,ty);
1746             fjz0             = _mm_add_pd(fjz0,tz);
1747
1748             /**************************
1749              * CALCULATE INTERACTIONS *
1750              **************************/
1751
1752             /* REACTION-FIELD ELECTROSTATICS */
1753             felec            = _mm_mul_pd(qq21,_mm_sub_pd(_mm_mul_pd(rinv21,rinvsq21),krf2));
1754
1755             fscal            = felec;
1756
1757             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1758
1759             /* Calculate temporary vectorial force */
1760             tx               = _mm_mul_pd(fscal,dx21);
1761             ty               = _mm_mul_pd(fscal,dy21);
1762             tz               = _mm_mul_pd(fscal,dz21);
1763
1764             /* Update vectorial force */
1765             fix2             = _mm_add_pd(fix2,tx);
1766             fiy2             = _mm_add_pd(fiy2,ty);
1767             fiz2             = _mm_add_pd(fiz2,tz);
1768
1769             fjx1             = _mm_add_pd(fjx1,tx);
1770             fjy1             = _mm_add_pd(fjy1,ty);
1771             fjz1             = _mm_add_pd(fjz1,tz);
1772
1773             /**************************
1774              * CALCULATE INTERACTIONS *
1775              **************************/
1776
1777             /* REACTION-FIELD ELECTROSTATICS */
1778             felec            = _mm_mul_pd(qq22,_mm_sub_pd(_mm_mul_pd(rinv22,rinvsq22),krf2));
1779
1780             fscal            = felec;
1781
1782             fscal            = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1783
1784             /* Calculate temporary vectorial force */
1785             tx               = _mm_mul_pd(fscal,dx22);
1786             ty               = _mm_mul_pd(fscal,dy22);
1787             tz               = _mm_mul_pd(fscal,dz22);
1788
1789             /* Update vectorial force */
1790             fix2             = _mm_add_pd(fix2,tx);
1791             fiy2             = _mm_add_pd(fiy2,ty);
1792             fiz2             = _mm_add_pd(fiz2,tz);
1793
1794             fjx2             = _mm_add_pd(fjx2,tx);
1795             fjy2             = _mm_add_pd(fjy2,ty);
1796             fjz2             = _mm_add_pd(fjz2,tz);
1797
1798             gmx_mm_decrement_3rvec_1ptr_swizzle_pd(f+j_coord_offsetA,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1799
1800             /* Inner loop uses 270 flops */
1801         }
1802
1803         /* End of innermost loop */
1804
1805         gmx_mm_update_iforce_3atom_swizzle_pd(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1806                                               f+i_coord_offset,fshift+i_shift_offset);
1807
1808         /* Increment number of inner iterations */
1809         inneriter                  += j_index_end - j_index_start;
1810
1811         /* Outer loop uses 18 flops */
1812     }
1813
1814     /* Increment number of outer iterations */
1815     outeriter        += nri;
1816
1817     /* Update outer/inner flops */
1818
1819     inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_F,outeriter*18 + inneriter*270);
1820 }