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36 * Note: this file was generated by the GROMACS sse4_1_double kernel generator.
42 #include "../nb_kernel.h"
43 #include "gromacs/legacyheaders/types/simple.h"
44 #include "gromacs/math/vec.h"
45 #include "gromacs/legacyheaders/nrnb.h"
47 #include "gromacs/simd/math_x86_sse4_1_double.h"
48 #include "kernelutil_x86_sse4_1_double.h"
51 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwLJ_GeomW3W3_VF_sse4_1_double
52 * Electrostatics interaction: Ewald
53 * VdW interaction: LennardJones
54 * Geometry: Water3-Water3
55 * Calculate force/pot: PotentialAndForce
58 nb_kernel_ElecEw_VdwLJ_GeomW3W3_VF_sse4_1_double
59 (t_nblist * gmx_restrict nlist,
60 rvec * gmx_restrict xx,
61 rvec * gmx_restrict ff,
62 t_forcerec * gmx_restrict fr,
63 t_mdatoms * gmx_restrict mdatoms,
64 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
65 t_nrnb * gmx_restrict nrnb)
67 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
68 * just 0 for non-waters.
69 * Suffixes A,B refer to j loop unrolling done with SSE double precision, e.g. for the two different
70 * jnr indices corresponding to data put in the four positions in the SIMD register.
72 int i_shift_offset,i_coord_offset,outeriter,inneriter;
73 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
75 int j_coord_offsetA,j_coord_offsetB;
76 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
78 real *shiftvec,*fshift,*x,*f;
79 __m128d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
81 __m128d ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
83 __m128d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
85 __m128d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
86 int vdwjidx0A,vdwjidx0B;
87 __m128d jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
88 int vdwjidx1A,vdwjidx1B;
89 __m128d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
90 int vdwjidx2A,vdwjidx2B;
91 __m128d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
92 __m128d dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
93 __m128d dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
94 __m128d dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
95 __m128d dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
96 __m128d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
97 __m128d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
98 __m128d dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
99 __m128d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
100 __m128d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
101 __m128d velec,felec,velecsum,facel,crf,krf,krf2;
104 __m128d rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
107 __m128d one_sixth = _mm_set1_pd(1.0/6.0);
108 __m128d one_twelfth = _mm_set1_pd(1.0/12.0);
110 __m128d ewtabscale,eweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
112 __m128d dummy_mask,cutoff_mask;
113 __m128d signbit = gmx_mm_castsi128_pd( _mm_set_epi32(0x80000000,0x00000000,0x80000000,0x00000000) );
114 __m128d one = _mm_set1_pd(1.0);
115 __m128d two = _mm_set1_pd(2.0);
121 jindex = nlist->jindex;
123 shiftidx = nlist->shift;
125 shiftvec = fr->shift_vec[0];
126 fshift = fr->fshift[0];
127 facel = _mm_set1_pd(fr->epsfac);
128 charge = mdatoms->chargeA;
129 nvdwtype = fr->ntype;
131 vdwtype = mdatoms->typeA;
133 sh_ewald = _mm_set1_pd(fr->ic->sh_ewald);
134 ewtab = fr->ic->tabq_coul_FDV0;
135 ewtabscale = _mm_set1_pd(fr->ic->tabq_scale);
136 ewtabhalfspace = _mm_set1_pd(0.5/fr->ic->tabq_scale);
138 /* Setup water-specific parameters */
139 inr = nlist->iinr[0];
140 iq0 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+0]));
141 iq1 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+1]));
142 iq2 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+2]));
143 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
145 jq0 = _mm_set1_pd(charge[inr+0]);
146 jq1 = _mm_set1_pd(charge[inr+1]);
147 jq2 = _mm_set1_pd(charge[inr+2]);
148 vdwjidx0A = 2*vdwtype[inr+0];
149 qq00 = _mm_mul_pd(iq0,jq0);
150 c6_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A]);
151 c12_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A+1]);
152 qq01 = _mm_mul_pd(iq0,jq1);
153 qq02 = _mm_mul_pd(iq0,jq2);
154 qq10 = _mm_mul_pd(iq1,jq0);
155 qq11 = _mm_mul_pd(iq1,jq1);
156 qq12 = _mm_mul_pd(iq1,jq2);
157 qq20 = _mm_mul_pd(iq2,jq0);
158 qq21 = _mm_mul_pd(iq2,jq1);
159 qq22 = _mm_mul_pd(iq2,jq2);
161 /* Avoid stupid compiler warnings */
169 /* Start outer loop over neighborlists */
170 for(iidx=0; iidx<nri; iidx++)
172 /* Load shift vector for this list */
173 i_shift_offset = DIM*shiftidx[iidx];
175 /* Load limits for loop over neighbors */
176 j_index_start = jindex[iidx];
177 j_index_end = jindex[iidx+1];
179 /* Get outer coordinate index */
181 i_coord_offset = DIM*inr;
183 /* Load i particle coords and add shift vector */
184 gmx_mm_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset,
185 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
187 fix0 = _mm_setzero_pd();
188 fiy0 = _mm_setzero_pd();
189 fiz0 = _mm_setzero_pd();
190 fix1 = _mm_setzero_pd();
191 fiy1 = _mm_setzero_pd();
192 fiz1 = _mm_setzero_pd();
193 fix2 = _mm_setzero_pd();
194 fiy2 = _mm_setzero_pd();
195 fiz2 = _mm_setzero_pd();
197 /* Reset potential sums */
198 velecsum = _mm_setzero_pd();
199 vvdwsum = _mm_setzero_pd();
201 /* Start inner kernel loop */
202 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
205 /* Get j neighbor index, and coordinate index */
208 j_coord_offsetA = DIM*jnrA;
209 j_coord_offsetB = DIM*jnrB;
211 /* load j atom coordinates */
212 gmx_mm_load_3rvec_2ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
213 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
215 /* Calculate displacement vector */
216 dx00 = _mm_sub_pd(ix0,jx0);
217 dy00 = _mm_sub_pd(iy0,jy0);
218 dz00 = _mm_sub_pd(iz0,jz0);
219 dx01 = _mm_sub_pd(ix0,jx1);
220 dy01 = _mm_sub_pd(iy0,jy1);
221 dz01 = _mm_sub_pd(iz0,jz1);
222 dx02 = _mm_sub_pd(ix0,jx2);
223 dy02 = _mm_sub_pd(iy0,jy2);
224 dz02 = _mm_sub_pd(iz0,jz2);
225 dx10 = _mm_sub_pd(ix1,jx0);
226 dy10 = _mm_sub_pd(iy1,jy0);
227 dz10 = _mm_sub_pd(iz1,jz0);
228 dx11 = _mm_sub_pd(ix1,jx1);
229 dy11 = _mm_sub_pd(iy1,jy1);
230 dz11 = _mm_sub_pd(iz1,jz1);
231 dx12 = _mm_sub_pd(ix1,jx2);
232 dy12 = _mm_sub_pd(iy1,jy2);
233 dz12 = _mm_sub_pd(iz1,jz2);
234 dx20 = _mm_sub_pd(ix2,jx0);
235 dy20 = _mm_sub_pd(iy2,jy0);
236 dz20 = _mm_sub_pd(iz2,jz0);
237 dx21 = _mm_sub_pd(ix2,jx1);
238 dy21 = _mm_sub_pd(iy2,jy1);
239 dz21 = _mm_sub_pd(iz2,jz1);
240 dx22 = _mm_sub_pd(ix2,jx2);
241 dy22 = _mm_sub_pd(iy2,jy2);
242 dz22 = _mm_sub_pd(iz2,jz2);
244 /* Calculate squared distance and things based on it */
245 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
246 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
247 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
248 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
249 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
250 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
251 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
252 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
253 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
255 rinv00 = gmx_mm_invsqrt_pd(rsq00);
256 rinv01 = gmx_mm_invsqrt_pd(rsq01);
257 rinv02 = gmx_mm_invsqrt_pd(rsq02);
258 rinv10 = gmx_mm_invsqrt_pd(rsq10);
259 rinv11 = gmx_mm_invsqrt_pd(rsq11);
260 rinv12 = gmx_mm_invsqrt_pd(rsq12);
261 rinv20 = gmx_mm_invsqrt_pd(rsq20);
262 rinv21 = gmx_mm_invsqrt_pd(rsq21);
263 rinv22 = gmx_mm_invsqrt_pd(rsq22);
265 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
266 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
267 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
268 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
269 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
270 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
271 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
272 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
273 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
275 fjx0 = _mm_setzero_pd();
276 fjy0 = _mm_setzero_pd();
277 fjz0 = _mm_setzero_pd();
278 fjx1 = _mm_setzero_pd();
279 fjy1 = _mm_setzero_pd();
280 fjz1 = _mm_setzero_pd();
281 fjx2 = _mm_setzero_pd();
282 fjy2 = _mm_setzero_pd();
283 fjz2 = _mm_setzero_pd();
285 /**************************
286 * CALCULATE INTERACTIONS *
287 **************************/
289 r00 = _mm_mul_pd(rsq00,rinv00);
291 /* EWALD ELECTROSTATICS */
293 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
294 ewrt = _mm_mul_pd(r00,ewtabscale);
295 ewitab = _mm_cvttpd_epi32(ewrt);
296 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
297 ewitab = _mm_slli_epi32(ewitab,2);
298 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
299 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
300 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
301 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
302 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
303 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
304 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
305 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
306 velec = _mm_mul_pd(qq00,_mm_sub_pd(rinv00,velec));
307 felec = _mm_mul_pd(_mm_mul_pd(qq00,rinv00),_mm_sub_pd(rinvsq00,felec));
309 /* LENNARD-JONES DISPERSION/REPULSION */
311 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
312 vvdw6 = _mm_mul_pd(c6_00,rinvsix);
313 vvdw12 = _mm_mul_pd(c12_00,_mm_mul_pd(rinvsix,rinvsix));
314 vvdw = _mm_sub_pd( _mm_mul_pd(vvdw12,one_twelfth) , _mm_mul_pd(vvdw6,one_sixth) );
315 fvdw = _mm_mul_pd(_mm_sub_pd(vvdw12,vvdw6),rinvsq00);
317 /* Update potential sum for this i atom from the interaction with this j atom. */
318 velecsum = _mm_add_pd(velecsum,velec);
319 vvdwsum = _mm_add_pd(vvdwsum,vvdw);
321 fscal = _mm_add_pd(felec,fvdw);
323 /* Calculate temporary vectorial force */
324 tx = _mm_mul_pd(fscal,dx00);
325 ty = _mm_mul_pd(fscal,dy00);
326 tz = _mm_mul_pd(fscal,dz00);
328 /* Update vectorial force */
329 fix0 = _mm_add_pd(fix0,tx);
330 fiy0 = _mm_add_pd(fiy0,ty);
331 fiz0 = _mm_add_pd(fiz0,tz);
333 fjx0 = _mm_add_pd(fjx0,tx);
334 fjy0 = _mm_add_pd(fjy0,ty);
335 fjz0 = _mm_add_pd(fjz0,tz);
337 /**************************
338 * CALCULATE INTERACTIONS *
339 **************************/
341 r01 = _mm_mul_pd(rsq01,rinv01);
343 /* EWALD ELECTROSTATICS */
345 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
346 ewrt = _mm_mul_pd(r01,ewtabscale);
347 ewitab = _mm_cvttpd_epi32(ewrt);
348 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
349 ewitab = _mm_slli_epi32(ewitab,2);
350 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
351 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
352 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
353 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
354 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
355 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
356 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
357 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
358 velec = _mm_mul_pd(qq01,_mm_sub_pd(rinv01,velec));
359 felec = _mm_mul_pd(_mm_mul_pd(qq01,rinv01),_mm_sub_pd(rinvsq01,felec));
361 /* Update potential sum for this i atom from the interaction with this j atom. */
362 velecsum = _mm_add_pd(velecsum,velec);
366 /* Calculate temporary vectorial force */
367 tx = _mm_mul_pd(fscal,dx01);
368 ty = _mm_mul_pd(fscal,dy01);
369 tz = _mm_mul_pd(fscal,dz01);
371 /* Update vectorial force */
372 fix0 = _mm_add_pd(fix0,tx);
373 fiy0 = _mm_add_pd(fiy0,ty);
374 fiz0 = _mm_add_pd(fiz0,tz);
376 fjx1 = _mm_add_pd(fjx1,tx);
377 fjy1 = _mm_add_pd(fjy1,ty);
378 fjz1 = _mm_add_pd(fjz1,tz);
380 /**************************
381 * CALCULATE INTERACTIONS *
382 **************************/
384 r02 = _mm_mul_pd(rsq02,rinv02);
386 /* EWALD ELECTROSTATICS */
388 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
389 ewrt = _mm_mul_pd(r02,ewtabscale);
390 ewitab = _mm_cvttpd_epi32(ewrt);
391 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
392 ewitab = _mm_slli_epi32(ewitab,2);
393 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
394 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
395 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
396 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
397 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
398 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
399 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
400 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
401 velec = _mm_mul_pd(qq02,_mm_sub_pd(rinv02,velec));
402 felec = _mm_mul_pd(_mm_mul_pd(qq02,rinv02),_mm_sub_pd(rinvsq02,felec));
404 /* Update potential sum for this i atom from the interaction with this j atom. */
405 velecsum = _mm_add_pd(velecsum,velec);
409 /* Calculate temporary vectorial force */
410 tx = _mm_mul_pd(fscal,dx02);
411 ty = _mm_mul_pd(fscal,dy02);
412 tz = _mm_mul_pd(fscal,dz02);
414 /* Update vectorial force */
415 fix0 = _mm_add_pd(fix0,tx);
416 fiy0 = _mm_add_pd(fiy0,ty);
417 fiz0 = _mm_add_pd(fiz0,tz);
419 fjx2 = _mm_add_pd(fjx2,tx);
420 fjy2 = _mm_add_pd(fjy2,ty);
421 fjz2 = _mm_add_pd(fjz2,tz);
423 /**************************
424 * CALCULATE INTERACTIONS *
425 **************************/
427 r10 = _mm_mul_pd(rsq10,rinv10);
429 /* EWALD ELECTROSTATICS */
431 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
432 ewrt = _mm_mul_pd(r10,ewtabscale);
433 ewitab = _mm_cvttpd_epi32(ewrt);
434 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
435 ewitab = _mm_slli_epi32(ewitab,2);
436 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
437 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
438 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
439 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
440 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
441 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
442 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
443 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
444 velec = _mm_mul_pd(qq10,_mm_sub_pd(rinv10,velec));
445 felec = _mm_mul_pd(_mm_mul_pd(qq10,rinv10),_mm_sub_pd(rinvsq10,felec));
447 /* Update potential sum for this i atom from the interaction with this j atom. */
448 velecsum = _mm_add_pd(velecsum,velec);
452 /* Calculate temporary vectorial force */
453 tx = _mm_mul_pd(fscal,dx10);
454 ty = _mm_mul_pd(fscal,dy10);
455 tz = _mm_mul_pd(fscal,dz10);
457 /* Update vectorial force */
458 fix1 = _mm_add_pd(fix1,tx);
459 fiy1 = _mm_add_pd(fiy1,ty);
460 fiz1 = _mm_add_pd(fiz1,tz);
462 fjx0 = _mm_add_pd(fjx0,tx);
463 fjy0 = _mm_add_pd(fjy0,ty);
464 fjz0 = _mm_add_pd(fjz0,tz);
466 /**************************
467 * CALCULATE INTERACTIONS *
468 **************************/
470 r11 = _mm_mul_pd(rsq11,rinv11);
472 /* EWALD ELECTROSTATICS */
474 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
475 ewrt = _mm_mul_pd(r11,ewtabscale);
476 ewitab = _mm_cvttpd_epi32(ewrt);
477 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
478 ewitab = _mm_slli_epi32(ewitab,2);
479 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
480 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
481 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
482 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
483 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
484 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
485 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
486 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
487 velec = _mm_mul_pd(qq11,_mm_sub_pd(rinv11,velec));
488 felec = _mm_mul_pd(_mm_mul_pd(qq11,rinv11),_mm_sub_pd(rinvsq11,felec));
490 /* Update potential sum for this i atom from the interaction with this j atom. */
491 velecsum = _mm_add_pd(velecsum,velec);
495 /* Calculate temporary vectorial force */
496 tx = _mm_mul_pd(fscal,dx11);
497 ty = _mm_mul_pd(fscal,dy11);
498 tz = _mm_mul_pd(fscal,dz11);
500 /* Update vectorial force */
501 fix1 = _mm_add_pd(fix1,tx);
502 fiy1 = _mm_add_pd(fiy1,ty);
503 fiz1 = _mm_add_pd(fiz1,tz);
505 fjx1 = _mm_add_pd(fjx1,tx);
506 fjy1 = _mm_add_pd(fjy1,ty);
507 fjz1 = _mm_add_pd(fjz1,tz);
509 /**************************
510 * CALCULATE INTERACTIONS *
511 **************************/
513 r12 = _mm_mul_pd(rsq12,rinv12);
515 /* EWALD ELECTROSTATICS */
517 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
518 ewrt = _mm_mul_pd(r12,ewtabscale);
519 ewitab = _mm_cvttpd_epi32(ewrt);
520 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
521 ewitab = _mm_slli_epi32(ewitab,2);
522 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
523 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
524 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
525 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
526 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
527 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
528 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
529 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
530 velec = _mm_mul_pd(qq12,_mm_sub_pd(rinv12,velec));
531 felec = _mm_mul_pd(_mm_mul_pd(qq12,rinv12),_mm_sub_pd(rinvsq12,felec));
533 /* Update potential sum for this i atom from the interaction with this j atom. */
534 velecsum = _mm_add_pd(velecsum,velec);
538 /* Calculate temporary vectorial force */
539 tx = _mm_mul_pd(fscal,dx12);
540 ty = _mm_mul_pd(fscal,dy12);
541 tz = _mm_mul_pd(fscal,dz12);
543 /* Update vectorial force */
544 fix1 = _mm_add_pd(fix1,tx);
545 fiy1 = _mm_add_pd(fiy1,ty);
546 fiz1 = _mm_add_pd(fiz1,tz);
548 fjx2 = _mm_add_pd(fjx2,tx);
549 fjy2 = _mm_add_pd(fjy2,ty);
550 fjz2 = _mm_add_pd(fjz2,tz);
552 /**************************
553 * CALCULATE INTERACTIONS *
554 **************************/
556 r20 = _mm_mul_pd(rsq20,rinv20);
558 /* EWALD ELECTROSTATICS */
560 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
561 ewrt = _mm_mul_pd(r20,ewtabscale);
562 ewitab = _mm_cvttpd_epi32(ewrt);
563 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
564 ewitab = _mm_slli_epi32(ewitab,2);
565 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
566 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
567 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
568 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
569 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
570 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
571 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
572 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
573 velec = _mm_mul_pd(qq20,_mm_sub_pd(rinv20,velec));
574 felec = _mm_mul_pd(_mm_mul_pd(qq20,rinv20),_mm_sub_pd(rinvsq20,felec));
576 /* Update potential sum for this i atom from the interaction with this j atom. */
577 velecsum = _mm_add_pd(velecsum,velec);
581 /* Calculate temporary vectorial force */
582 tx = _mm_mul_pd(fscal,dx20);
583 ty = _mm_mul_pd(fscal,dy20);
584 tz = _mm_mul_pd(fscal,dz20);
586 /* Update vectorial force */
587 fix2 = _mm_add_pd(fix2,tx);
588 fiy2 = _mm_add_pd(fiy2,ty);
589 fiz2 = _mm_add_pd(fiz2,tz);
591 fjx0 = _mm_add_pd(fjx0,tx);
592 fjy0 = _mm_add_pd(fjy0,ty);
593 fjz0 = _mm_add_pd(fjz0,tz);
595 /**************************
596 * CALCULATE INTERACTIONS *
597 **************************/
599 r21 = _mm_mul_pd(rsq21,rinv21);
601 /* EWALD ELECTROSTATICS */
603 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
604 ewrt = _mm_mul_pd(r21,ewtabscale);
605 ewitab = _mm_cvttpd_epi32(ewrt);
606 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
607 ewitab = _mm_slli_epi32(ewitab,2);
608 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
609 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
610 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
611 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
612 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
613 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
614 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
615 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
616 velec = _mm_mul_pd(qq21,_mm_sub_pd(rinv21,velec));
617 felec = _mm_mul_pd(_mm_mul_pd(qq21,rinv21),_mm_sub_pd(rinvsq21,felec));
619 /* Update potential sum for this i atom from the interaction with this j atom. */
620 velecsum = _mm_add_pd(velecsum,velec);
624 /* Calculate temporary vectorial force */
625 tx = _mm_mul_pd(fscal,dx21);
626 ty = _mm_mul_pd(fscal,dy21);
627 tz = _mm_mul_pd(fscal,dz21);
629 /* Update vectorial force */
630 fix2 = _mm_add_pd(fix2,tx);
631 fiy2 = _mm_add_pd(fiy2,ty);
632 fiz2 = _mm_add_pd(fiz2,tz);
634 fjx1 = _mm_add_pd(fjx1,tx);
635 fjy1 = _mm_add_pd(fjy1,ty);
636 fjz1 = _mm_add_pd(fjz1,tz);
638 /**************************
639 * CALCULATE INTERACTIONS *
640 **************************/
642 r22 = _mm_mul_pd(rsq22,rinv22);
644 /* EWALD ELECTROSTATICS */
646 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
647 ewrt = _mm_mul_pd(r22,ewtabscale);
648 ewitab = _mm_cvttpd_epi32(ewrt);
649 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
650 ewitab = _mm_slli_epi32(ewitab,2);
651 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
652 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
653 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
654 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
655 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
656 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
657 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
658 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
659 velec = _mm_mul_pd(qq22,_mm_sub_pd(rinv22,velec));
660 felec = _mm_mul_pd(_mm_mul_pd(qq22,rinv22),_mm_sub_pd(rinvsq22,felec));
662 /* Update potential sum for this i atom from the interaction with this j atom. */
663 velecsum = _mm_add_pd(velecsum,velec);
667 /* Calculate temporary vectorial force */
668 tx = _mm_mul_pd(fscal,dx22);
669 ty = _mm_mul_pd(fscal,dy22);
670 tz = _mm_mul_pd(fscal,dz22);
672 /* Update vectorial force */
673 fix2 = _mm_add_pd(fix2,tx);
674 fiy2 = _mm_add_pd(fiy2,ty);
675 fiz2 = _mm_add_pd(fiz2,tz);
677 fjx2 = _mm_add_pd(fjx2,tx);
678 fjy2 = _mm_add_pd(fjy2,ty);
679 fjz2 = _mm_add_pd(fjz2,tz);
681 gmx_mm_decrement_3rvec_2ptr_swizzle_pd(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
683 /* Inner loop uses 381 flops */
690 j_coord_offsetA = DIM*jnrA;
692 /* load j atom coordinates */
693 gmx_mm_load_3rvec_1ptr_swizzle_pd(x+j_coord_offsetA,
694 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
696 /* Calculate displacement vector */
697 dx00 = _mm_sub_pd(ix0,jx0);
698 dy00 = _mm_sub_pd(iy0,jy0);
699 dz00 = _mm_sub_pd(iz0,jz0);
700 dx01 = _mm_sub_pd(ix0,jx1);
701 dy01 = _mm_sub_pd(iy0,jy1);
702 dz01 = _mm_sub_pd(iz0,jz1);
703 dx02 = _mm_sub_pd(ix0,jx2);
704 dy02 = _mm_sub_pd(iy0,jy2);
705 dz02 = _mm_sub_pd(iz0,jz2);
706 dx10 = _mm_sub_pd(ix1,jx0);
707 dy10 = _mm_sub_pd(iy1,jy0);
708 dz10 = _mm_sub_pd(iz1,jz0);
709 dx11 = _mm_sub_pd(ix1,jx1);
710 dy11 = _mm_sub_pd(iy1,jy1);
711 dz11 = _mm_sub_pd(iz1,jz1);
712 dx12 = _mm_sub_pd(ix1,jx2);
713 dy12 = _mm_sub_pd(iy1,jy2);
714 dz12 = _mm_sub_pd(iz1,jz2);
715 dx20 = _mm_sub_pd(ix2,jx0);
716 dy20 = _mm_sub_pd(iy2,jy0);
717 dz20 = _mm_sub_pd(iz2,jz0);
718 dx21 = _mm_sub_pd(ix2,jx1);
719 dy21 = _mm_sub_pd(iy2,jy1);
720 dz21 = _mm_sub_pd(iz2,jz1);
721 dx22 = _mm_sub_pd(ix2,jx2);
722 dy22 = _mm_sub_pd(iy2,jy2);
723 dz22 = _mm_sub_pd(iz2,jz2);
725 /* Calculate squared distance and things based on it */
726 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
727 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
728 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
729 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
730 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
731 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
732 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
733 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
734 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
736 rinv00 = gmx_mm_invsqrt_pd(rsq00);
737 rinv01 = gmx_mm_invsqrt_pd(rsq01);
738 rinv02 = gmx_mm_invsqrt_pd(rsq02);
739 rinv10 = gmx_mm_invsqrt_pd(rsq10);
740 rinv11 = gmx_mm_invsqrt_pd(rsq11);
741 rinv12 = gmx_mm_invsqrt_pd(rsq12);
742 rinv20 = gmx_mm_invsqrt_pd(rsq20);
743 rinv21 = gmx_mm_invsqrt_pd(rsq21);
744 rinv22 = gmx_mm_invsqrt_pd(rsq22);
746 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
747 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
748 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
749 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
750 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
751 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
752 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
753 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
754 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
756 fjx0 = _mm_setzero_pd();
757 fjy0 = _mm_setzero_pd();
758 fjz0 = _mm_setzero_pd();
759 fjx1 = _mm_setzero_pd();
760 fjy1 = _mm_setzero_pd();
761 fjz1 = _mm_setzero_pd();
762 fjx2 = _mm_setzero_pd();
763 fjy2 = _mm_setzero_pd();
764 fjz2 = _mm_setzero_pd();
766 /**************************
767 * CALCULATE INTERACTIONS *
768 **************************/
770 r00 = _mm_mul_pd(rsq00,rinv00);
772 /* EWALD ELECTROSTATICS */
774 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
775 ewrt = _mm_mul_pd(r00,ewtabscale);
776 ewitab = _mm_cvttpd_epi32(ewrt);
777 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
778 ewitab = _mm_slli_epi32(ewitab,2);
779 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
780 ewtabD = _mm_setzero_pd();
781 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
782 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
783 ewtabFn = _mm_setzero_pd();
784 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
785 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
786 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
787 velec = _mm_mul_pd(qq00,_mm_sub_pd(rinv00,velec));
788 felec = _mm_mul_pd(_mm_mul_pd(qq00,rinv00),_mm_sub_pd(rinvsq00,felec));
790 /* LENNARD-JONES DISPERSION/REPULSION */
792 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
793 vvdw6 = _mm_mul_pd(c6_00,rinvsix);
794 vvdw12 = _mm_mul_pd(c12_00,_mm_mul_pd(rinvsix,rinvsix));
795 vvdw = _mm_sub_pd( _mm_mul_pd(vvdw12,one_twelfth) , _mm_mul_pd(vvdw6,one_sixth) );
796 fvdw = _mm_mul_pd(_mm_sub_pd(vvdw12,vvdw6),rinvsq00);
798 /* Update potential sum for this i atom from the interaction with this j atom. */
799 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
800 velecsum = _mm_add_pd(velecsum,velec);
801 vvdw = _mm_unpacklo_pd(vvdw,_mm_setzero_pd());
802 vvdwsum = _mm_add_pd(vvdwsum,vvdw);
804 fscal = _mm_add_pd(felec,fvdw);
806 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
808 /* Calculate temporary vectorial force */
809 tx = _mm_mul_pd(fscal,dx00);
810 ty = _mm_mul_pd(fscal,dy00);
811 tz = _mm_mul_pd(fscal,dz00);
813 /* Update vectorial force */
814 fix0 = _mm_add_pd(fix0,tx);
815 fiy0 = _mm_add_pd(fiy0,ty);
816 fiz0 = _mm_add_pd(fiz0,tz);
818 fjx0 = _mm_add_pd(fjx0,tx);
819 fjy0 = _mm_add_pd(fjy0,ty);
820 fjz0 = _mm_add_pd(fjz0,tz);
822 /**************************
823 * CALCULATE INTERACTIONS *
824 **************************/
826 r01 = _mm_mul_pd(rsq01,rinv01);
828 /* EWALD ELECTROSTATICS */
830 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
831 ewrt = _mm_mul_pd(r01,ewtabscale);
832 ewitab = _mm_cvttpd_epi32(ewrt);
833 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
834 ewitab = _mm_slli_epi32(ewitab,2);
835 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
836 ewtabD = _mm_setzero_pd();
837 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
838 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
839 ewtabFn = _mm_setzero_pd();
840 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
841 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
842 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
843 velec = _mm_mul_pd(qq01,_mm_sub_pd(rinv01,velec));
844 felec = _mm_mul_pd(_mm_mul_pd(qq01,rinv01),_mm_sub_pd(rinvsq01,felec));
846 /* Update potential sum for this i atom from the interaction with this j atom. */
847 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
848 velecsum = _mm_add_pd(velecsum,velec);
852 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
854 /* Calculate temporary vectorial force */
855 tx = _mm_mul_pd(fscal,dx01);
856 ty = _mm_mul_pd(fscal,dy01);
857 tz = _mm_mul_pd(fscal,dz01);
859 /* Update vectorial force */
860 fix0 = _mm_add_pd(fix0,tx);
861 fiy0 = _mm_add_pd(fiy0,ty);
862 fiz0 = _mm_add_pd(fiz0,tz);
864 fjx1 = _mm_add_pd(fjx1,tx);
865 fjy1 = _mm_add_pd(fjy1,ty);
866 fjz1 = _mm_add_pd(fjz1,tz);
868 /**************************
869 * CALCULATE INTERACTIONS *
870 **************************/
872 r02 = _mm_mul_pd(rsq02,rinv02);
874 /* EWALD ELECTROSTATICS */
876 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
877 ewrt = _mm_mul_pd(r02,ewtabscale);
878 ewitab = _mm_cvttpd_epi32(ewrt);
879 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
880 ewitab = _mm_slli_epi32(ewitab,2);
881 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
882 ewtabD = _mm_setzero_pd();
883 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
884 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
885 ewtabFn = _mm_setzero_pd();
886 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
887 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
888 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
889 velec = _mm_mul_pd(qq02,_mm_sub_pd(rinv02,velec));
890 felec = _mm_mul_pd(_mm_mul_pd(qq02,rinv02),_mm_sub_pd(rinvsq02,felec));
892 /* Update potential sum for this i atom from the interaction with this j atom. */
893 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
894 velecsum = _mm_add_pd(velecsum,velec);
898 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
900 /* Calculate temporary vectorial force */
901 tx = _mm_mul_pd(fscal,dx02);
902 ty = _mm_mul_pd(fscal,dy02);
903 tz = _mm_mul_pd(fscal,dz02);
905 /* Update vectorial force */
906 fix0 = _mm_add_pd(fix0,tx);
907 fiy0 = _mm_add_pd(fiy0,ty);
908 fiz0 = _mm_add_pd(fiz0,tz);
910 fjx2 = _mm_add_pd(fjx2,tx);
911 fjy2 = _mm_add_pd(fjy2,ty);
912 fjz2 = _mm_add_pd(fjz2,tz);
914 /**************************
915 * CALCULATE INTERACTIONS *
916 **************************/
918 r10 = _mm_mul_pd(rsq10,rinv10);
920 /* EWALD ELECTROSTATICS */
922 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
923 ewrt = _mm_mul_pd(r10,ewtabscale);
924 ewitab = _mm_cvttpd_epi32(ewrt);
925 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
926 ewitab = _mm_slli_epi32(ewitab,2);
927 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
928 ewtabD = _mm_setzero_pd();
929 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
930 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
931 ewtabFn = _mm_setzero_pd();
932 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
933 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
934 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
935 velec = _mm_mul_pd(qq10,_mm_sub_pd(rinv10,velec));
936 felec = _mm_mul_pd(_mm_mul_pd(qq10,rinv10),_mm_sub_pd(rinvsq10,felec));
938 /* Update potential sum for this i atom from the interaction with this j atom. */
939 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
940 velecsum = _mm_add_pd(velecsum,velec);
944 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
946 /* Calculate temporary vectorial force */
947 tx = _mm_mul_pd(fscal,dx10);
948 ty = _mm_mul_pd(fscal,dy10);
949 tz = _mm_mul_pd(fscal,dz10);
951 /* Update vectorial force */
952 fix1 = _mm_add_pd(fix1,tx);
953 fiy1 = _mm_add_pd(fiy1,ty);
954 fiz1 = _mm_add_pd(fiz1,tz);
956 fjx0 = _mm_add_pd(fjx0,tx);
957 fjy0 = _mm_add_pd(fjy0,ty);
958 fjz0 = _mm_add_pd(fjz0,tz);
960 /**************************
961 * CALCULATE INTERACTIONS *
962 **************************/
964 r11 = _mm_mul_pd(rsq11,rinv11);
966 /* EWALD ELECTROSTATICS */
968 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
969 ewrt = _mm_mul_pd(r11,ewtabscale);
970 ewitab = _mm_cvttpd_epi32(ewrt);
971 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
972 ewitab = _mm_slli_epi32(ewitab,2);
973 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
974 ewtabD = _mm_setzero_pd();
975 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
976 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
977 ewtabFn = _mm_setzero_pd();
978 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
979 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
980 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
981 velec = _mm_mul_pd(qq11,_mm_sub_pd(rinv11,velec));
982 felec = _mm_mul_pd(_mm_mul_pd(qq11,rinv11),_mm_sub_pd(rinvsq11,felec));
984 /* Update potential sum for this i atom from the interaction with this j atom. */
985 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
986 velecsum = _mm_add_pd(velecsum,velec);
990 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
992 /* Calculate temporary vectorial force */
993 tx = _mm_mul_pd(fscal,dx11);
994 ty = _mm_mul_pd(fscal,dy11);
995 tz = _mm_mul_pd(fscal,dz11);
997 /* Update vectorial force */
998 fix1 = _mm_add_pd(fix1,tx);
999 fiy1 = _mm_add_pd(fiy1,ty);
1000 fiz1 = _mm_add_pd(fiz1,tz);
1002 fjx1 = _mm_add_pd(fjx1,tx);
1003 fjy1 = _mm_add_pd(fjy1,ty);
1004 fjz1 = _mm_add_pd(fjz1,tz);
1006 /**************************
1007 * CALCULATE INTERACTIONS *
1008 **************************/
1010 r12 = _mm_mul_pd(rsq12,rinv12);
1012 /* EWALD ELECTROSTATICS */
1014 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1015 ewrt = _mm_mul_pd(r12,ewtabscale);
1016 ewitab = _mm_cvttpd_epi32(ewrt);
1017 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1018 ewitab = _mm_slli_epi32(ewitab,2);
1019 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1020 ewtabD = _mm_setzero_pd();
1021 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
1022 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
1023 ewtabFn = _mm_setzero_pd();
1024 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
1025 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
1026 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
1027 velec = _mm_mul_pd(qq12,_mm_sub_pd(rinv12,velec));
1028 felec = _mm_mul_pd(_mm_mul_pd(qq12,rinv12),_mm_sub_pd(rinvsq12,felec));
1030 /* Update potential sum for this i atom from the interaction with this j atom. */
1031 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
1032 velecsum = _mm_add_pd(velecsum,velec);
1036 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1038 /* Calculate temporary vectorial force */
1039 tx = _mm_mul_pd(fscal,dx12);
1040 ty = _mm_mul_pd(fscal,dy12);
1041 tz = _mm_mul_pd(fscal,dz12);
1043 /* Update vectorial force */
1044 fix1 = _mm_add_pd(fix1,tx);
1045 fiy1 = _mm_add_pd(fiy1,ty);
1046 fiz1 = _mm_add_pd(fiz1,tz);
1048 fjx2 = _mm_add_pd(fjx2,tx);
1049 fjy2 = _mm_add_pd(fjy2,ty);
1050 fjz2 = _mm_add_pd(fjz2,tz);
1052 /**************************
1053 * CALCULATE INTERACTIONS *
1054 **************************/
1056 r20 = _mm_mul_pd(rsq20,rinv20);
1058 /* EWALD ELECTROSTATICS */
1060 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1061 ewrt = _mm_mul_pd(r20,ewtabscale);
1062 ewitab = _mm_cvttpd_epi32(ewrt);
1063 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1064 ewitab = _mm_slli_epi32(ewitab,2);
1065 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1066 ewtabD = _mm_setzero_pd();
1067 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
1068 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
1069 ewtabFn = _mm_setzero_pd();
1070 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
1071 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
1072 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
1073 velec = _mm_mul_pd(qq20,_mm_sub_pd(rinv20,velec));
1074 felec = _mm_mul_pd(_mm_mul_pd(qq20,rinv20),_mm_sub_pd(rinvsq20,felec));
1076 /* Update potential sum for this i atom from the interaction with this j atom. */
1077 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
1078 velecsum = _mm_add_pd(velecsum,velec);
1082 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1084 /* Calculate temporary vectorial force */
1085 tx = _mm_mul_pd(fscal,dx20);
1086 ty = _mm_mul_pd(fscal,dy20);
1087 tz = _mm_mul_pd(fscal,dz20);
1089 /* Update vectorial force */
1090 fix2 = _mm_add_pd(fix2,tx);
1091 fiy2 = _mm_add_pd(fiy2,ty);
1092 fiz2 = _mm_add_pd(fiz2,tz);
1094 fjx0 = _mm_add_pd(fjx0,tx);
1095 fjy0 = _mm_add_pd(fjy0,ty);
1096 fjz0 = _mm_add_pd(fjz0,tz);
1098 /**************************
1099 * CALCULATE INTERACTIONS *
1100 **************************/
1102 r21 = _mm_mul_pd(rsq21,rinv21);
1104 /* EWALD ELECTROSTATICS */
1106 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1107 ewrt = _mm_mul_pd(r21,ewtabscale);
1108 ewitab = _mm_cvttpd_epi32(ewrt);
1109 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1110 ewitab = _mm_slli_epi32(ewitab,2);
1111 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1112 ewtabD = _mm_setzero_pd();
1113 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
1114 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
1115 ewtabFn = _mm_setzero_pd();
1116 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
1117 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
1118 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
1119 velec = _mm_mul_pd(qq21,_mm_sub_pd(rinv21,velec));
1120 felec = _mm_mul_pd(_mm_mul_pd(qq21,rinv21),_mm_sub_pd(rinvsq21,felec));
1122 /* Update potential sum for this i atom from the interaction with this j atom. */
1123 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
1124 velecsum = _mm_add_pd(velecsum,velec);
1128 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1130 /* Calculate temporary vectorial force */
1131 tx = _mm_mul_pd(fscal,dx21);
1132 ty = _mm_mul_pd(fscal,dy21);
1133 tz = _mm_mul_pd(fscal,dz21);
1135 /* Update vectorial force */
1136 fix2 = _mm_add_pd(fix2,tx);
1137 fiy2 = _mm_add_pd(fiy2,ty);
1138 fiz2 = _mm_add_pd(fiz2,tz);
1140 fjx1 = _mm_add_pd(fjx1,tx);
1141 fjy1 = _mm_add_pd(fjy1,ty);
1142 fjz1 = _mm_add_pd(fjz1,tz);
1144 /**************************
1145 * CALCULATE INTERACTIONS *
1146 **************************/
1148 r22 = _mm_mul_pd(rsq22,rinv22);
1150 /* EWALD ELECTROSTATICS */
1152 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1153 ewrt = _mm_mul_pd(r22,ewtabscale);
1154 ewitab = _mm_cvttpd_epi32(ewrt);
1155 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1156 ewitab = _mm_slli_epi32(ewitab,2);
1157 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1158 ewtabD = _mm_setzero_pd();
1159 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
1160 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
1161 ewtabFn = _mm_setzero_pd();
1162 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
1163 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
1164 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
1165 velec = _mm_mul_pd(qq22,_mm_sub_pd(rinv22,velec));
1166 felec = _mm_mul_pd(_mm_mul_pd(qq22,rinv22),_mm_sub_pd(rinvsq22,felec));
1168 /* Update potential sum for this i atom from the interaction with this j atom. */
1169 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
1170 velecsum = _mm_add_pd(velecsum,velec);
1174 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1176 /* Calculate temporary vectorial force */
1177 tx = _mm_mul_pd(fscal,dx22);
1178 ty = _mm_mul_pd(fscal,dy22);
1179 tz = _mm_mul_pd(fscal,dz22);
1181 /* Update vectorial force */
1182 fix2 = _mm_add_pd(fix2,tx);
1183 fiy2 = _mm_add_pd(fiy2,ty);
1184 fiz2 = _mm_add_pd(fiz2,tz);
1186 fjx2 = _mm_add_pd(fjx2,tx);
1187 fjy2 = _mm_add_pd(fjy2,ty);
1188 fjz2 = _mm_add_pd(fjz2,tz);
1190 gmx_mm_decrement_3rvec_1ptr_swizzle_pd(f+j_coord_offsetA,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1192 /* Inner loop uses 381 flops */
1195 /* End of innermost loop */
1197 gmx_mm_update_iforce_3atom_swizzle_pd(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1198 f+i_coord_offset,fshift+i_shift_offset);
1201 /* Update potential energies */
1202 gmx_mm_update_1pot_pd(velecsum,kernel_data->energygrp_elec+ggid);
1203 gmx_mm_update_1pot_pd(vvdwsum,kernel_data->energygrp_vdw+ggid);
1205 /* Increment number of inner iterations */
1206 inneriter += j_index_end - j_index_start;
1208 /* Outer loop uses 20 flops */
1211 /* Increment number of outer iterations */
1214 /* Update outer/inner flops */
1216 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_VF,outeriter*20 + inneriter*381);
1219 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwLJ_GeomW3W3_F_sse4_1_double
1220 * Electrostatics interaction: Ewald
1221 * VdW interaction: LennardJones
1222 * Geometry: Water3-Water3
1223 * Calculate force/pot: Force
1226 nb_kernel_ElecEw_VdwLJ_GeomW3W3_F_sse4_1_double
1227 (t_nblist * gmx_restrict nlist,
1228 rvec * gmx_restrict xx,
1229 rvec * gmx_restrict ff,
1230 t_forcerec * gmx_restrict fr,
1231 t_mdatoms * gmx_restrict mdatoms,
1232 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
1233 t_nrnb * gmx_restrict nrnb)
1235 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
1236 * just 0 for non-waters.
1237 * Suffixes A,B refer to j loop unrolling done with SSE double precision, e.g. for the two different
1238 * jnr indices corresponding to data put in the four positions in the SIMD register.
1240 int i_shift_offset,i_coord_offset,outeriter,inneriter;
1241 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1243 int j_coord_offsetA,j_coord_offsetB;
1244 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
1245 real rcutoff_scalar;
1246 real *shiftvec,*fshift,*x,*f;
1247 __m128d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
1249 __m128d ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
1251 __m128d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1253 __m128d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1254 int vdwjidx0A,vdwjidx0B;
1255 __m128d jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
1256 int vdwjidx1A,vdwjidx1B;
1257 __m128d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1258 int vdwjidx2A,vdwjidx2B;
1259 __m128d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1260 __m128d dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
1261 __m128d dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
1262 __m128d dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
1263 __m128d dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
1264 __m128d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1265 __m128d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1266 __m128d dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
1267 __m128d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1268 __m128d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1269 __m128d velec,felec,velecsum,facel,crf,krf,krf2;
1272 __m128d rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
1275 __m128d one_sixth = _mm_set1_pd(1.0/6.0);
1276 __m128d one_twelfth = _mm_set1_pd(1.0/12.0);
1278 __m128d ewtabscale,eweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
1280 __m128d dummy_mask,cutoff_mask;
1281 __m128d signbit = gmx_mm_castsi128_pd( _mm_set_epi32(0x80000000,0x00000000,0x80000000,0x00000000) );
1282 __m128d one = _mm_set1_pd(1.0);
1283 __m128d two = _mm_set1_pd(2.0);
1289 jindex = nlist->jindex;
1291 shiftidx = nlist->shift;
1293 shiftvec = fr->shift_vec[0];
1294 fshift = fr->fshift[0];
1295 facel = _mm_set1_pd(fr->epsfac);
1296 charge = mdatoms->chargeA;
1297 nvdwtype = fr->ntype;
1298 vdwparam = fr->nbfp;
1299 vdwtype = mdatoms->typeA;
1301 sh_ewald = _mm_set1_pd(fr->ic->sh_ewald);
1302 ewtab = fr->ic->tabq_coul_F;
1303 ewtabscale = _mm_set1_pd(fr->ic->tabq_scale);
1304 ewtabhalfspace = _mm_set1_pd(0.5/fr->ic->tabq_scale);
1306 /* Setup water-specific parameters */
1307 inr = nlist->iinr[0];
1308 iq0 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+0]));
1309 iq1 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+1]));
1310 iq2 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+2]));
1311 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
1313 jq0 = _mm_set1_pd(charge[inr+0]);
1314 jq1 = _mm_set1_pd(charge[inr+1]);
1315 jq2 = _mm_set1_pd(charge[inr+2]);
1316 vdwjidx0A = 2*vdwtype[inr+0];
1317 qq00 = _mm_mul_pd(iq0,jq0);
1318 c6_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A]);
1319 c12_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A+1]);
1320 qq01 = _mm_mul_pd(iq0,jq1);
1321 qq02 = _mm_mul_pd(iq0,jq2);
1322 qq10 = _mm_mul_pd(iq1,jq0);
1323 qq11 = _mm_mul_pd(iq1,jq1);
1324 qq12 = _mm_mul_pd(iq1,jq2);
1325 qq20 = _mm_mul_pd(iq2,jq0);
1326 qq21 = _mm_mul_pd(iq2,jq1);
1327 qq22 = _mm_mul_pd(iq2,jq2);
1329 /* Avoid stupid compiler warnings */
1331 j_coord_offsetA = 0;
1332 j_coord_offsetB = 0;
1337 /* Start outer loop over neighborlists */
1338 for(iidx=0; iidx<nri; iidx++)
1340 /* Load shift vector for this list */
1341 i_shift_offset = DIM*shiftidx[iidx];
1343 /* Load limits for loop over neighbors */
1344 j_index_start = jindex[iidx];
1345 j_index_end = jindex[iidx+1];
1347 /* Get outer coordinate index */
1349 i_coord_offset = DIM*inr;
1351 /* Load i particle coords and add shift vector */
1352 gmx_mm_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset,
1353 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
1355 fix0 = _mm_setzero_pd();
1356 fiy0 = _mm_setzero_pd();
1357 fiz0 = _mm_setzero_pd();
1358 fix1 = _mm_setzero_pd();
1359 fiy1 = _mm_setzero_pd();
1360 fiz1 = _mm_setzero_pd();
1361 fix2 = _mm_setzero_pd();
1362 fiy2 = _mm_setzero_pd();
1363 fiz2 = _mm_setzero_pd();
1365 /* Start inner kernel loop */
1366 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
1369 /* Get j neighbor index, and coordinate index */
1371 jnrB = jjnr[jidx+1];
1372 j_coord_offsetA = DIM*jnrA;
1373 j_coord_offsetB = DIM*jnrB;
1375 /* load j atom coordinates */
1376 gmx_mm_load_3rvec_2ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
1377 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1379 /* Calculate displacement vector */
1380 dx00 = _mm_sub_pd(ix0,jx0);
1381 dy00 = _mm_sub_pd(iy0,jy0);
1382 dz00 = _mm_sub_pd(iz0,jz0);
1383 dx01 = _mm_sub_pd(ix0,jx1);
1384 dy01 = _mm_sub_pd(iy0,jy1);
1385 dz01 = _mm_sub_pd(iz0,jz1);
1386 dx02 = _mm_sub_pd(ix0,jx2);
1387 dy02 = _mm_sub_pd(iy0,jy2);
1388 dz02 = _mm_sub_pd(iz0,jz2);
1389 dx10 = _mm_sub_pd(ix1,jx0);
1390 dy10 = _mm_sub_pd(iy1,jy0);
1391 dz10 = _mm_sub_pd(iz1,jz0);
1392 dx11 = _mm_sub_pd(ix1,jx1);
1393 dy11 = _mm_sub_pd(iy1,jy1);
1394 dz11 = _mm_sub_pd(iz1,jz1);
1395 dx12 = _mm_sub_pd(ix1,jx2);
1396 dy12 = _mm_sub_pd(iy1,jy2);
1397 dz12 = _mm_sub_pd(iz1,jz2);
1398 dx20 = _mm_sub_pd(ix2,jx0);
1399 dy20 = _mm_sub_pd(iy2,jy0);
1400 dz20 = _mm_sub_pd(iz2,jz0);
1401 dx21 = _mm_sub_pd(ix2,jx1);
1402 dy21 = _mm_sub_pd(iy2,jy1);
1403 dz21 = _mm_sub_pd(iz2,jz1);
1404 dx22 = _mm_sub_pd(ix2,jx2);
1405 dy22 = _mm_sub_pd(iy2,jy2);
1406 dz22 = _mm_sub_pd(iz2,jz2);
1408 /* Calculate squared distance and things based on it */
1409 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
1410 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
1411 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
1412 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
1413 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
1414 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
1415 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
1416 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
1417 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
1419 rinv00 = gmx_mm_invsqrt_pd(rsq00);
1420 rinv01 = gmx_mm_invsqrt_pd(rsq01);
1421 rinv02 = gmx_mm_invsqrt_pd(rsq02);
1422 rinv10 = gmx_mm_invsqrt_pd(rsq10);
1423 rinv11 = gmx_mm_invsqrt_pd(rsq11);
1424 rinv12 = gmx_mm_invsqrt_pd(rsq12);
1425 rinv20 = gmx_mm_invsqrt_pd(rsq20);
1426 rinv21 = gmx_mm_invsqrt_pd(rsq21);
1427 rinv22 = gmx_mm_invsqrt_pd(rsq22);
1429 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
1430 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
1431 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
1432 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
1433 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
1434 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
1435 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
1436 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
1437 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
1439 fjx0 = _mm_setzero_pd();
1440 fjy0 = _mm_setzero_pd();
1441 fjz0 = _mm_setzero_pd();
1442 fjx1 = _mm_setzero_pd();
1443 fjy1 = _mm_setzero_pd();
1444 fjz1 = _mm_setzero_pd();
1445 fjx2 = _mm_setzero_pd();
1446 fjy2 = _mm_setzero_pd();
1447 fjz2 = _mm_setzero_pd();
1449 /**************************
1450 * CALCULATE INTERACTIONS *
1451 **************************/
1453 r00 = _mm_mul_pd(rsq00,rinv00);
1455 /* EWALD ELECTROSTATICS */
1457 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1458 ewrt = _mm_mul_pd(r00,ewtabscale);
1459 ewitab = _mm_cvttpd_epi32(ewrt);
1460 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1461 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1463 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1464 felec = _mm_mul_pd(_mm_mul_pd(qq00,rinv00),_mm_sub_pd(rinvsq00,felec));
1466 /* LENNARD-JONES DISPERSION/REPULSION */
1468 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
1469 fvdw = _mm_mul_pd(_mm_sub_pd(_mm_mul_pd(c12_00,rinvsix),c6_00),_mm_mul_pd(rinvsix,rinvsq00));
1471 fscal = _mm_add_pd(felec,fvdw);
1473 /* Calculate temporary vectorial force */
1474 tx = _mm_mul_pd(fscal,dx00);
1475 ty = _mm_mul_pd(fscal,dy00);
1476 tz = _mm_mul_pd(fscal,dz00);
1478 /* Update vectorial force */
1479 fix0 = _mm_add_pd(fix0,tx);
1480 fiy0 = _mm_add_pd(fiy0,ty);
1481 fiz0 = _mm_add_pd(fiz0,tz);
1483 fjx0 = _mm_add_pd(fjx0,tx);
1484 fjy0 = _mm_add_pd(fjy0,ty);
1485 fjz0 = _mm_add_pd(fjz0,tz);
1487 /**************************
1488 * CALCULATE INTERACTIONS *
1489 **************************/
1491 r01 = _mm_mul_pd(rsq01,rinv01);
1493 /* EWALD ELECTROSTATICS */
1495 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1496 ewrt = _mm_mul_pd(r01,ewtabscale);
1497 ewitab = _mm_cvttpd_epi32(ewrt);
1498 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1499 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1501 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1502 felec = _mm_mul_pd(_mm_mul_pd(qq01,rinv01),_mm_sub_pd(rinvsq01,felec));
1506 /* Calculate temporary vectorial force */
1507 tx = _mm_mul_pd(fscal,dx01);
1508 ty = _mm_mul_pd(fscal,dy01);
1509 tz = _mm_mul_pd(fscal,dz01);
1511 /* Update vectorial force */
1512 fix0 = _mm_add_pd(fix0,tx);
1513 fiy0 = _mm_add_pd(fiy0,ty);
1514 fiz0 = _mm_add_pd(fiz0,tz);
1516 fjx1 = _mm_add_pd(fjx1,tx);
1517 fjy1 = _mm_add_pd(fjy1,ty);
1518 fjz1 = _mm_add_pd(fjz1,tz);
1520 /**************************
1521 * CALCULATE INTERACTIONS *
1522 **************************/
1524 r02 = _mm_mul_pd(rsq02,rinv02);
1526 /* EWALD ELECTROSTATICS */
1528 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1529 ewrt = _mm_mul_pd(r02,ewtabscale);
1530 ewitab = _mm_cvttpd_epi32(ewrt);
1531 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1532 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1534 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1535 felec = _mm_mul_pd(_mm_mul_pd(qq02,rinv02),_mm_sub_pd(rinvsq02,felec));
1539 /* Calculate temporary vectorial force */
1540 tx = _mm_mul_pd(fscal,dx02);
1541 ty = _mm_mul_pd(fscal,dy02);
1542 tz = _mm_mul_pd(fscal,dz02);
1544 /* Update vectorial force */
1545 fix0 = _mm_add_pd(fix0,tx);
1546 fiy0 = _mm_add_pd(fiy0,ty);
1547 fiz0 = _mm_add_pd(fiz0,tz);
1549 fjx2 = _mm_add_pd(fjx2,tx);
1550 fjy2 = _mm_add_pd(fjy2,ty);
1551 fjz2 = _mm_add_pd(fjz2,tz);
1553 /**************************
1554 * CALCULATE INTERACTIONS *
1555 **************************/
1557 r10 = _mm_mul_pd(rsq10,rinv10);
1559 /* EWALD ELECTROSTATICS */
1561 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1562 ewrt = _mm_mul_pd(r10,ewtabscale);
1563 ewitab = _mm_cvttpd_epi32(ewrt);
1564 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1565 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1567 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1568 felec = _mm_mul_pd(_mm_mul_pd(qq10,rinv10),_mm_sub_pd(rinvsq10,felec));
1572 /* Calculate temporary vectorial force */
1573 tx = _mm_mul_pd(fscal,dx10);
1574 ty = _mm_mul_pd(fscal,dy10);
1575 tz = _mm_mul_pd(fscal,dz10);
1577 /* Update vectorial force */
1578 fix1 = _mm_add_pd(fix1,tx);
1579 fiy1 = _mm_add_pd(fiy1,ty);
1580 fiz1 = _mm_add_pd(fiz1,tz);
1582 fjx0 = _mm_add_pd(fjx0,tx);
1583 fjy0 = _mm_add_pd(fjy0,ty);
1584 fjz0 = _mm_add_pd(fjz0,tz);
1586 /**************************
1587 * CALCULATE INTERACTIONS *
1588 **************************/
1590 r11 = _mm_mul_pd(rsq11,rinv11);
1592 /* EWALD ELECTROSTATICS */
1594 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1595 ewrt = _mm_mul_pd(r11,ewtabscale);
1596 ewitab = _mm_cvttpd_epi32(ewrt);
1597 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1598 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1600 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1601 felec = _mm_mul_pd(_mm_mul_pd(qq11,rinv11),_mm_sub_pd(rinvsq11,felec));
1605 /* Calculate temporary vectorial force */
1606 tx = _mm_mul_pd(fscal,dx11);
1607 ty = _mm_mul_pd(fscal,dy11);
1608 tz = _mm_mul_pd(fscal,dz11);
1610 /* Update vectorial force */
1611 fix1 = _mm_add_pd(fix1,tx);
1612 fiy1 = _mm_add_pd(fiy1,ty);
1613 fiz1 = _mm_add_pd(fiz1,tz);
1615 fjx1 = _mm_add_pd(fjx1,tx);
1616 fjy1 = _mm_add_pd(fjy1,ty);
1617 fjz1 = _mm_add_pd(fjz1,tz);
1619 /**************************
1620 * CALCULATE INTERACTIONS *
1621 **************************/
1623 r12 = _mm_mul_pd(rsq12,rinv12);
1625 /* EWALD ELECTROSTATICS */
1627 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1628 ewrt = _mm_mul_pd(r12,ewtabscale);
1629 ewitab = _mm_cvttpd_epi32(ewrt);
1630 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1631 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1633 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1634 felec = _mm_mul_pd(_mm_mul_pd(qq12,rinv12),_mm_sub_pd(rinvsq12,felec));
1638 /* Calculate temporary vectorial force */
1639 tx = _mm_mul_pd(fscal,dx12);
1640 ty = _mm_mul_pd(fscal,dy12);
1641 tz = _mm_mul_pd(fscal,dz12);
1643 /* Update vectorial force */
1644 fix1 = _mm_add_pd(fix1,tx);
1645 fiy1 = _mm_add_pd(fiy1,ty);
1646 fiz1 = _mm_add_pd(fiz1,tz);
1648 fjx2 = _mm_add_pd(fjx2,tx);
1649 fjy2 = _mm_add_pd(fjy2,ty);
1650 fjz2 = _mm_add_pd(fjz2,tz);
1652 /**************************
1653 * CALCULATE INTERACTIONS *
1654 **************************/
1656 r20 = _mm_mul_pd(rsq20,rinv20);
1658 /* EWALD ELECTROSTATICS */
1660 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1661 ewrt = _mm_mul_pd(r20,ewtabscale);
1662 ewitab = _mm_cvttpd_epi32(ewrt);
1663 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1664 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1666 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1667 felec = _mm_mul_pd(_mm_mul_pd(qq20,rinv20),_mm_sub_pd(rinvsq20,felec));
1671 /* Calculate temporary vectorial force */
1672 tx = _mm_mul_pd(fscal,dx20);
1673 ty = _mm_mul_pd(fscal,dy20);
1674 tz = _mm_mul_pd(fscal,dz20);
1676 /* Update vectorial force */
1677 fix2 = _mm_add_pd(fix2,tx);
1678 fiy2 = _mm_add_pd(fiy2,ty);
1679 fiz2 = _mm_add_pd(fiz2,tz);
1681 fjx0 = _mm_add_pd(fjx0,tx);
1682 fjy0 = _mm_add_pd(fjy0,ty);
1683 fjz0 = _mm_add_pd(fjz0,tz);
1685 /**************************
1686 * CALCULATE INTERACTIONS *
1687 **************************/
1689 r21 = _mm_mul_pd(rsq21,rinv21);
1691 /* EWALD ELECTROSTATICS */
1693 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1694 ewrt = _mm_mul_pd(r21,ewtabscale);
1695 ewitab = _mm_cvttpd_epi32(ewrt);
1696 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1697 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1699 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1700 felec = _mm_mul_pd(_mm_mul_pd(qq21,rinv21),_mm_sub_pd(rinvsq21,felec));
1704 /* Calculate temporary vectorial force */
1705 tx = _mm_mul_pd(fscal,dx21);
1706 ty = _mm_mul_pd(fscal,dy21);
1707 tz = _mm_mul_pd(fscal,dz21);
1709 /* Update vectorial force */
1710 fix2 = _mm_add_pd(fix2,tx);
1711 fiy2 = _mm_add_pd(fiy2,ty);
1712 fiz2 = _mm_add_pd(fiz2,tz);
1714 fjx1 = _mm_add_pd(fjx1,tx);
1715 fjy1 = _mm_add_pd(fjy1,ty);
1716 fjz1 = _mm_add_pd(fjz1,tz);
1718 /**************************
1719 * CALCULATE INTERACTIONS *
1720 **************************/
1722 r22 = _mm_mul_pd(rsq22,rinv22);
1724 /* EWALD ELECTROSTATICS */
1726 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1727 ewrt = _mm_mul_pd(r22,ewtabscale);
1728 ewitab = _mm_cvttpd_epi32(ewrt);
1729 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1730 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1732 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1733 felec = _mm_mul_pd(_mm_mul_pd(qq22,rinv22),_mm_sub_pd(rinvsq22,felec));
1737 /* Calculate temporary vectorial force */
1738 tx = _mm_mul_pd(fscal,dx22);
1739 ty = _mm_mul_pd(fscal,dy22);
1740 tz = _mm_mul_pd(fscal,dz22);
1742 /* Update vectorial force */
1743 fix2 = _mm_add_pd(fix2,tx);
1744 fiy2 = _mm_add_pd(fiy2,ty);
1745 fiz2 = _mm_add_pd(fiz2,tz);
1747 fjx2 = _mm_add_pd(fjx2,tx);
1748 fjy2 = _mm_add_pd(fjy2,ty);
1749 fjz2 = _mm_add_pd(fjz2,tz);
1751 gmx_mm_decrement_3rvec_2ptr_swizzle_pd(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1753 /* Inner loop uses 331 flops */
1756 if(jidx<j_index_end)
1760 j_coord_offsetA = DIM*jnrA;
1762 /* load j atom coordinates */
1763 gmx_mm_load_3rvec_1ptr_swizzle_pd(x+j_coord_offsetA,
1764 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1766 /* Calculate displacement vector */
1767 dx00 = _mm_sub_pd(ix0,jx0);
1768 dy00 = _mm_sub_pd(iy0,jy0);
1769 dz00 = _mm_sub_pd(iz0,jz0);
1770 dx01 = _mm_sub_pd(ix0,jx1);
1771 dy01 = _mm_sub_pd(iy0,jy1);
1772 dz01 = _mm_sub_pd(iz0,jz1);
1773 dx02 = _mm_sub_pd(ix0,jx2);
1774 dy02 = _mm_sub_pd(iy0,jy2);
1775 dz02 = _mm_sub_pd(iz0,jz2);
1776 dx10 = _mm_sub_pd(ix1,jx0);
1777 dy10 = _mm_sub_pd(iy1,jy0);
1778 dz10 = _mm_sub_pd(iz1,jz0);
1779 dx11 = _mm_sub_pd(ix1,jx1);
1780 dy11 = _mm_sub_pd(iy1,jy1);
1781 dz11 = _mm_sub_pd(iz1,jz1);
1782 dx12 = _mm_sub_pd(ix1,jx2);
1783 dy12 = _mm_sub_pd(iy1,jy2);
1784 dz12 = _mm_sub_pd(iz1,jz2);
1785 dx20 = _mm_sub_pd(ix2,jx0);
1786 dy20 = _mm_sub_pd(iy2,jy0);
1787 dz20 = _mm_sub_pd(iz2,jz0);
1788 dx21 = _mm_sub_pd(ix2,jx1);
1789 dy21 = _mm_sub_pd(iy2,jy1);
1790 dz21 = _mm_sub_pd(iz2,jz1);
1791 dx22 = _mm_sub_pd(ix2,jx2);
1792 dy22 = _mm_sub_pd(iy2,jy2);
1793 dz22 = _mm_sub_pd(iz2,jz2);
1795 /* Calculate squared distance and things based on it */
1796 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
1797 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
1798 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
1799 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
1800 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
1801 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
1802 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
1803 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
1804 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
1806 rinv00 = gmx_mm_invsqrt_pd(rsq00);
1807 rinv01 = gmx_mm_invsqrt_pd(rsq01);
1808 rinv02 = gmx_mm_invsqrt_pd(rsq02);
1809 rinv10 = gmx_mm_invsqrt_pd(rsq10);
1810 rinv11 = gmx_mm_invsqrt_pd(rsq11);
1811 rinv12 = gmx_mm_invsqrt_pd(rsq12);
1812 rinv20 = gmx_mm_invsqrt_pd(rsq20);
1813 rinv21 = gmx_mm_invsqrt_pd(rsq21);
1814 rinv22 = gmx_mm_invsqrt_pd(rsq22);
1816 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
1817 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
1818 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
1819 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
1820 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
1821 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
1822 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
1823 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
1824 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
1826 fjx0 = _mm_setzero_pd();
1827 fjy0 = _mm_setzero_pd();
1828 fjz0 = _mm_setzero_pd();
1829 fjx1 = _mm_setzero_pd();
1830 fjy1 = _mm_setzero_pd();
1831 fjz1 = _mm_setzero_pd();
1832 fjx2 = _mm_setzero_pd();
1833 fjy2 = _mm_setzero_pd();
1834 fjz2 = _mm_setzero_pd();
1836 /**************************
1837 * CALCULATE INTERACTIONS *
1838 **************************/
1840 r00 = _mm_mul_pd(rsq00,rinv00);
1842 /* EWALD ELECTROSTATICS */
1844 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1845 ewrt = _mm_mul_pd(r00,ewtabscale);
1846 ewitab = _mm_cvttpd_epi32(ewrt);
1847 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1848 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
1849 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1850 felec = _mm_mul_pd(_mm_mul_pd(qq00,rinv00),_mm_sub_pd(rinvsq00,felec));
1852 /* LENNARD-JONES DISPERSION/REPULSION */
1854 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
1855 fvdw = _mm_mul_pd(_mm_sub_pd(_mm_mul_pd(c12_00,rinvsix),c6_00),_mm_mul_pd(rinvsix,rinvsq00));
1857 fscal = _mm_add_pd(felec,fvdw);
1859 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1861 /* Calculate temporary vectorial force */
1862 tx = _mm_mul_pd(fscal,dx00);
1863 ty = _mm_mul_pd(fscal,dy00);
1864 tz = _mm_mul_pd(fscal,dz00);
1866 /* Update vectorial force */
1867 fix0 = _mm_add_pd(fix0,tx);
1868 fiy0 = _mm_add_pd(fiy0,ty);
1869 fiz0 = _mm_add_pd(fiz0,tz);
1871 fjx0 = _mm_add_pd(fjx0,tx);
1872 fjy0 = _mm_add_pd(fjy0,ty);
1873 fjz0 = _mm_add_pd(fjz0,tz);
1875 /**************************
1876 * CALCULATE INTERACTIONS *
1877 **************************/
1879 r01 = _mm_mul_pd(rsq01,rinv01);
1881 /* EWALD ELECTROSTATICS */
1883 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1884 ewrt = _mm_mul_pd(r01,ewtabscale);
1885 ewitab = _mm_cvttpd_epi32(ewrt);
1886 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1887 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
1888 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1889 felec = _mm_mul_pd(_mm_mul_pd(qq01,rinv01),_mm_sub_pd(rinvsq01,felec));
1893 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1895 /* Calculate temporary vectorial force */
1896 tx = _mm_mul_pd(fscal,dx01);
1897 ty = _mm_mul_pd(fscal,dy01);
1898 tz = _mm_mul_pd(fscal,dz01);
1900 /* Update vectorial force */
1901 fix0 = _mm_add_pd(fix0,tx);
1902 fiy0 = _mm_add_pd(fiy0,ty);
1903 fiz0 = _mm_add_pd(fiz0,tz);
1905 fjx1 = _mm_add_pd(fjx1,tx);
1906 fjy1 = _mm_add_pd(fjy1,ty);
1907 fjz1 = _mm_add_pd(fjz1,tz);
1909 /**************************
1910 * CALCULATE INTERACTIONS *
1911 **************************/
1913 r02 = _mm_mul_pd(rsq02,rinv02);
1915 /* EWALD ELECTROSTATICS */
1917 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1918 ewrt = _mm_mul_pd(r02,ewtabscale);
1919 ewitab = _mm_cvttpd_epi32(ewrt);
1920 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1921 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
1922 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1923 felec = _mm_mul_pd(_mm_mul_pd(qq02,rinv02),_mm_sub_pd(rinvsq02,felec));
1927 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1929 /* Calculate temporary vectorial force */
1930 tx = _mm_mul_pd(fscal,dx02);
1931 ty = _mm_mul_pd(fscal,dy02);
1932 tz = _mm_mul_pd(fscal,dz02);
1934 /* Update vectorial force */
1935 fix0 = _mm_add_pd(fix0,tx);
1936 fiy0 = _mm_add_pd(fiy0,ty);
1937 fiz0 = _mm_add_pd(fiz0,tz);
1939 fjx2 = _mm_add_pd(fjx2,tx);
1940 fjy2 = _mm_add_pd(fjy2,ty);
1941 fjz2 = _mm_add_pd(fjz2,tz);
1943 /**************************
1944 * CALCULATE INTERACTIONS *
1945 **************************/
1947 r10 = _mm_mul_pd(rsq10,rinv10);
1949 /* EWALD ELECTROSTATICS */
1951 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1952 ewrt = _mm_mul_pd(r10,ewtabscale);
1953 ewitab = _mm_cvttpd_epi32(ewrt);
1954 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1955 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
1956 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1957 felec = _mm_mul_pd(_mm_mul_pd(qq10,rinv10),_mm_sub_pd(rinvsq10,felec));
1961 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1963 /* Calculate temporary vectorial force */
1964 tx = _mm_mul_pd(fscal,dx10);
1965 ty = _mm_mul_pd(fscal,dy10);
1966 tz = _mm_mul_pd(fscal,dz10);
1968 /* Update vectorial force */
1969 fix1 = _mm_add_pd(fix1,tx);
1970 fiy1 = _mm_add_pd(fiy1,ty);
1971 fiz1 = _mm_add_pd(fiz1,tz);
1973 fjx0 = _mm_add_pd(fjx0,tx);
1974 fjy0 = _mm_add_pd(fjy0,ty);
1975 fjz0 = _mm_add_pd(fjz0,tz);
1977 /**************************
1978 * CALCULATE INTERACTIONS *
1979 **************************/
1981 r11 = _mm_mul_pd(rsq11,rinv11);
1983 /* EWALD ELECTROSTATICS */
1985 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1986 ewrt = _mm_mul_pd(r11,ewtabscale);
1987 ewitab = _mm_cvttpd_epi32(ewrt);
1988 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1989 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
1990 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1991 felec = _mm_mul_pd(_mm_mul_pd(qq11,rinv11),_mm_sub_pd(rinvsq11,felec));
1995 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1997 /* Calculate temporary vectorial force */
1998 tx = _mm_mul_pd(fscal,dx11);
1999 ty = _mm_mul_pd(fscal,dy11);
2000 tz = _mm_mul_pd(fscal,dz11);
2002 /* Update vectorial force */
2003 fix1 = _mm_add_pd(fix1,tx);
2004 fiy1 = _mm_add_pd(fiy1,ty);
2005 fiz1 = _mm_add_pd(fiz1,tz);
2007 fjx1 = _mm_add_pd(fjx1,tx);
2008 fjy1 = _mm_add_pd(fjy1,ty);
2009 fjz1 = _mm_add_pd(fjz1,tz);
2011 /**************************
2012 * CALCULATE INTERACTIONS *
2013 **************************/
2015 r12 = _mm_mul_pd(rsq12,rinv12);
2017 /* EWALD ELECTROSTATICS */
2019 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2020 ewrt = _mm_mul_pd(r12,ewtabscale);
2021 ewitab = _mm_cvttpd_epi32(ewrt);
2022 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
2023 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
2024 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
2025 felec = _mm_mul_pd(_mm_mul_pd(qq12,rinv12),_mm_sub_pd(rinvsq12,felec));
2029 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
2031 /* Calculate temporary vectorial force */
2032 tx = _mm_mul_pd(fscal,dx12);
2033 ty = _mm_mul_pd(fscal,dy12);
2034 tz = _mm_mul_pd(fscal,dz12);
2036 /* Update vectorial force */
2037 fix1 = _mm_add_pd(fix1,tx);
2038 fiy1 = _mm_add_pd(fiy1,ty);
2039 fiz1 = _mm_add_pd(fiz1,tz);
2041 fjx2 = _mm_add_pd(fjx2,tx);
2042 fjy2 = _mm_add_pd(fjy2,ty);
2043 fjz2 = _mm_add_pd(fjz2,tz);
2045 /**************************
2046 * CALCULATE INTERACTIONS *
2047 **************************/
2049 r20 = _mm_mul_pd(rsq20,rinv20);
2051 /* EWALD ELECTROSTATICS */
2053 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2054 ewrt = _mm_mul_pd(r20,ewtabscale);
2055 ewitab = _mm_cvttpd_epi32(ewrt);
2056 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
2057 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
2058 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
2059 felec = _mm_mul_pd(_mm_mul_pd(qq20,rinv20),_mm_sub_pd(rinvsq20,felec));
2063 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
2065 /* Calculate temporary vectorial force */
2066 tx = _mm_mul_pd(fscal,dx20);
2067 ty = _mm_mul_pd(fscal,dy20);
2068 tz = _mm_mul_pd(fscal,dz20);
2070 /* Update vectorial force */
2071 fix2 = _mm_add_pd(fix2,tx);
2072 fiy2 = _mm_add_pd(fiy2,ty);
2073 fiz2 = _mm_add_pd(fiz2,tz);
2075 fjx0 = _mm_add_pd(fjx0,tx);
2076 fjy0 = _mm_add_pd(fjy0,ty);
2077 fjz0 = _mm_add_pd(fjz0,tz);
2079 /**************************
2080 * CALCULATE INTERACTIONS *
2081 **************************/
2083 r21 = _mm_mul_pd(rsq21,rinv21);
2085 /* EWALD ELECTROSTATICS */
2087 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2088 ewrt = _mm_mul_pd(r21,ewtabscale);
2089 ewitab = _mm_cvttpd_epi32(ewrt);
2090 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
2091 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
2092 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
2093 felec = _mm_mul_pd(_mm_mul_pd(qq21,rinv21),_mm_sub_pd(rinvsq21,felec));
2097 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
2099 /* Calculate temporary vectorial force */
2100 tx = _mm_mul_pd(fscal,dx21);
2101 ty = _mm_mul_pd(fscal,dy21);
2102 tz = _mm_mul_pd(fscal,dz21);
2104 /* Update vectorial force */
2105 fix2 = _mm_add_pd(fix2,tx);
2106 fiy2 = _mm_add_pd(fiy2,ty);
2107 fiz2 = _mm_add_pd(fiz2,tz);
2109 fjx1 = _mm_add_pd(fjx1,tx);
2110 fjy1 = _mm_add_pd(fjy1,ty);
2111 fjz1 = _mm_add_pd(fjz1,tz);
2113 /**************************
2114 * CALCULATE INTERACTIONS *
2115 **************************/
2117 r22 = _mm_mul_pd(rsq22,rinv22);
2119 /* EWALD ELECTROSTATICS */
2121 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2122 ewrt = _mm_mul_pd(r22,ewtabscale);
2123 ewitab = _mm_cvttpd_epi32(ewrt);
2124 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
2125 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
2126 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
2127 felec = _mm_mul_pd(_mm_mul_pd(qq22,rinv22),_mm_sub_pd(rinvsq22,felec));
2131 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
2133 /* Calculate temporary vectorial force */
2134 tx = _mm_mul_pd(fscal,dx22);
2135 ty = _mm_mul_pd(fscal,dy22);
2136 tz = _mm_mul_pd(fscal,dz22);
2138 /* Update vectorial force */
2139 fix2 = _mm_add_pd(fix2,tx);
2140 fiy2 = _mm_add_pd(fiy2,ty);
2141 fiz2 = _mm_add_pd(fiz2,tz);
2143 fjx2 = _mm_add_pd(fjx2,tx);
2144 fjy2 = _mm_add_pd(fjy2,ty);
2145 fjz2 = _mm_add_pd(fjz2,tz);
2147 gmx_mm_decrement_3rvec_1ptr_swizzle_pd(f+j_coord_offsetA,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
2149 /* Inner loop uses 331 flops */
2152 /* End of innermost loop */
2154 gmx_mm_update_iforce_3atom_swizzle_pd(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
2155 f+i_coord_offset,fshift+i_shift_offset);
2157 /* Increment number of inner iterations */
2158 inneriter += j_index_end - j_index_start;
2160 /* Outer loop uses 18 flops */
2163 /* Increment number of outer iterations */
2166 /* Update outer/inner flops */
2168 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_F,outeriter*18 + inneriter*331);