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36 * Note: this file was generated by the GROMACS sse4_1_double kernel generator.
44 #include "../nb_kernel.h"
45 #include "gromacs/gmxlib/nrnb.h"
47 #include "kernelutil_x86_sse4_1_double.h"
50 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwLJ_GeomW3W3_VF_sse4_1_double
51 * Electrostatics interaction: Ewald
52 * VdW interaction: LennardJones
53 * Geometry: Water3-Water3
54 * Calculate force/pot: PotentialAndForce
57 nb_kernel_ElecEw_VdwLJ_GeomW3W3_VF_sse4_1_double
58 (t_nblist * gmx_restrict nlist,
59 rvec * gmx_restrict xx,
60 rvec * gmx_restrict ff,
61 struct t_forcerec * gmx_restrict fr,
62 t_mdatoms * gmx_restrict mdatoms,
63 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
64 t_nrnb * gmx_restrict nrnb)
66 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
67 * just 0 for non-waters.
68 * Suffixes A,B refer to j loop unrolling done with SSE double precision, e.g. for the two different
69 * jnr indices corresponding to data put in the four positions in the SIMD register.
71 int i_shift_offset,i_coord_offset,outeriter,inneriter;
72 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
74 int j_coord_offsetA,j_coord_offsetB;
75 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
77 real *shiftvec,*fshift,*x,*f;
78 __m128d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
80 __m128d ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
82 __m128d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
84 __m128d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
85 int vdwjidx0A,vdwjidx0B;
86 __m128d jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
87 int vdwjidx1A,vdwjidx1B;
88 __m128d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
89 int vdwjidx2A,vdwjidx2B;
90 __m128d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
91 __m128d dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
92 __m128d dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
93 __m128d dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
94 __m128d dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
95 __m128d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
96 __m128d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
97 __m128d dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
98 __m128d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
99 __m128d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
100 __m128d velec,felec,velecsum,facel,crf,krf,krf2;
103 __m128d rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
106 __m128d one_sixth = _mm_set1_pd(1.0/6.0);
107 __m128d one_twelfth = _mm_set1_pd(1.0/12.0);
109 __m128d ewtabscale,eweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
111 __m128d dummy_mask,cutoff_mask;
112 __m128d signbit = gmx_mm_castsi128_pd( _mm_set_epi32(0x80000000,0x00000000,0x80000000,0x00000000) );
113 __m128d one = _mm_set1_pd(1.0);
114 __m128d two = _mm_set1_pd(2.0);
120 jindex = nlist->jindex;
122 shiftidx = nlist->shift;
124 shiftvec = fr->shift_vec[0];
125 fshift = fr->fshift[0];
126 facel = _mm_set1_pd(fr->ic->epsfac);
127 charge = mdatoms->chargeA;
128 nvdwtype = fr->ntype;
130 vdwtype = mdatoms->typeA;
132 sh_ewald = _mm_set1_pd(fr->ic->sh_ewald);
133 ewtab = fr->ic->tabq_coul_FDV0;
134 ewtabscale = _mm_set1_pd(fr->ic->tabq_scale);
135 ewtabhalfspace = _mm_set1_pd(0.5/fr->ic->tabq_scale);
137 /* Setup water-specific parameters */
138 inr = nlist->iinr[0];
139 iq0 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+0]));
140 iq1 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+1]));
141 iq2 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+2]));
142 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
144 jq0 = _mm_set1_pd(charge[inr+0]);
145 jq1 = _mm_set1_pd(charge[inr+1]);
146 jq2 = _mm_set1_pd(charge[inr+2]);
147 vdwjidx0A = 2*vdwtype[inr+0];
148 qq00 = _mm_mul_pd(iq0,jq0);
149 c6_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A]);
150 c12_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A+1]);
151 qq01 = _mm_mul_pd(iq0,jq1);
152 qq02 = _mm_mul_pd(iq0,jq2);
153 qq10 = _mm_mul_pd(iq1,jq0);
154 qq11 = _mm_mul_pd(iq1,jq1);
155 qq12 = _mm_mul_pd(iq1,jq2);
156 qq20 = _mm_mul_pd(iq2,jq0);
157 qq21 = _mm_mul_pd(iq2,jq1);
158 qq22 = _mm_mul_pd(iq2,jq2);
160 /* Avoid stupid compiler warnings */
168 /* Start outer loop over neighborlists */
169 for(iidx=0; iidx<nri; iidx++)
171 /* Load shift vector for this list */
172 i_shift_offset = DIM*shiftidx[iidx];
174 /* Load limits for loop over neighbors */
175 j_index_start = jindex[iidx];
176 j_index_end = jindex[iidx+1];
178 /* Get outer coordinate index */
180 i_coord_offset = DIM*inr;
182 /* Load i particle coords and add shift vector */
183 gmx_mm_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset,
184 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
186 fix0 = _mm_setzero_pd();
187 fiy0 = _mm_setzero_pd();
188 fiz0 = _mm_setzero_pd();
189 fix1 = _mm_setzero_pd();
190 fiy1 = _mm_setzero_pd();
191 fiz1 = _mm_setzero_pd();
192 fix2 = _mm_setzero_pd();
193 fiy2 = _mm_setzero_pd();
194 fiz2 = _mm_setzero_pd();
196 /* Reset potential sums */
197 velecsum = _mm_setzero_pd();
198 vvdwsum = _mm_setzero_pd();
200 /* Start inner kernel loop */
201 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
204 /* Get j neighbor index, and coordinate index */
207 j_coord_offsetA = DIM*jnrA;
208 j_coord_offsetB = DIM*jnrB;
210 /* load j atom coordinates */
211 gmx_mm_load_3rvec_2ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
212 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
214 /* Calculate displacement vector */
215 dx00 = _mm_sub_pd(ix0,jx0);
216 dy00 = _mm_sub_pd(iy0,jy0);
217 dz00 = _mm_sub_pd(iz0,jz0);
218 dx01 = _mm_sub_pd(ix0,jx1);
219 dy01 = _mm_sub_pd(iy0,jy1);
220 dz01 = _mm_sub_pd(iz0,jz1);
221 dx02 = _mm_sub_pd(ix0,jx2);
222 dy02 = _mm_sub_pd(iy0,jy2);
223 dz02 = _mm_sub_pd(iz0,jz2);
224 dx10 = _mm_sub_pd(ix1,jx0);
225 dy10 = _mm_sub_pd(iy1,jy0);
226 dz10 = _mm_sub_pd(iz1,jz0);
227 dx11 = _mm_sub_pd(ix1,jx1);
228 dy11 = _mm_sub_pd(iy1,jy1);
229 dz11 = _mm_sub_pd(iz1,jz1);
230 dx12 = _mm_sub_pd(ix1,jx2);
231 dy12 = _mm_sub_pd(iy1,jy2);
232 dz12 = _mm_sub_pd(iz1,jz2);
233 dx20 = _mm_sub_pd(ix2,jx0);
234 dy20 = _mm_sub_pd(iy2,jy0);
235 dz20 = _mm_sub_pd(iz2,jz0);
236 dx21 = _mm_sub_pd(ix2,jx1);
237 dy21 = _mm_sub_pd(iy2,jy1);
238 dz21 = _mm_sub_pd(iz2,jz1);
239 dx22 = _mm_sub_pd(ix2,jx2);
240 dy22 = _mm_sub_pd(iy2,jy2);
241 dz22 = _mm_sub_pd(iz2,jz2);
243 /* Calculate squared distance and things based on it */
244 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
245 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
246 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
247 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
248 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
249 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
250 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
251 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
252 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
254 rinv00 = sse41_invsqrt_d(rsq00);
255 rinv01 = sse41_invsqrt_d(rsq01);
256 rinv02 = sse41_invsqrt_d(rsq02);
257 rinv10 = sse41_invsqrt_d(rsq10);
258 rinv11 = sse41_invsqrt_d(rsq11);
259 rinv12 = sse41_invsqrt_d(rsq12);
260 rinv20 = sse41_invsqrt_d(rsq20);
261 rinv21 = sse41_invsqrt_d(rsq21);
262 rinv22 = sse41_invsqrt_d(rsq22);
264 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
265 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
266 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
267 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
268 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
269 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
270 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
271 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
272 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
274 fjx0 = _mm_setzero_pd();
275 fjy0 = _mm_setzero_pd();
276 fjz0 = _mm_setzero_pd();
277 fjx1 = _mm_setzero_pd();
278 fjy1 = _mm_setzero_pd();
279 fjz1 = _mm_setzero_pd();
280 fjx2 = _mm_setzero_pd();
281 fjy2 = _mm_setzero_pd();
282 fjz2 = _mm_setzero_pd();
284 /**************************
285 * CALCULATE INTERACTIONS *
286 **************************/
288 r00 = _mm_mul_pd(rsq00,rinv00);
290 /* EWALD ELECTROSTATICS */
292 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
293 ewrt = _mm_mul_pd(r00,ewtabscale);
294 ewitab = _mm_cvttpd_epi32(ewrt);
295 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
296 ewitab = _mm_slli_epi32(ewitab,2);
297 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
298 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
299 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
300 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
301 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
302 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
303 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
304 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
305 velec = _mm_mul_pd(qq00,_mm_sub_pd(rinv00,velec));
306 felec = _mm_mul_pd(_mm_mul_pd(qq00,rinv00),_mm_sub_pd(rinvsq00,felec));
308 /* LENNARD-JONES DISPERSION/REPULSION */
310 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
311 vvdw6 = _mm_mul_pd(c6_00,rinvsix);
312 vvdw12 = _mm_mul_pd(c12_00,_mm_mul_pd(rinvsix,rinvsix));
313 vvdw = _mm_sub_pd( _mm_mul_pd(vvdw12,one_twelfth) , _mm_mul_pd(vvdw6,one_sixth) );
314 fvdw = _mm_mul_pd(_mm_sub_pd(vvdw12,vvdw6),rinvsq00);
316 /* Update potential sum for this i atom from the interaction with this j atom. */
317 velecsum = _mm_add_pd(velecsum,velec);
318 vvdwsum = _mm_add_pd(vvdwsum,vvdw);
320 fscal = _mm_add_pd(felec,fvdw);
322 /* Calculate temporary vectorial force */
323 tx = _mm_mul_pd(fscal,dx00);
324 ty = _mm_mul_pd(fscal,dy00);
325 tz = _mm_mul_pd(fscal,dz00);
327 /* Update vectorial force */
328 fix0 = _mm_add_pd(fix0,tx);
329 fiy0 = _mm_add_pd(fiy0,ty);
330 fiz0 = _mm_add_pd(fiz0,tz);
332 fjx0 = _mm_add_pd(fjx0,tx);
333 fjy0 = _mm_add_pd(fjy0,ty);
334 fjz0 = _mm_add_pd(fjz0,tz);
336 /**************************
337 * CALCULATE INTERACTIONS *
338 **************************/
340 r01 = _mm_mul_pd(rsq01,rinv01);
342 /* EWALD ELECTROSTATICS */
344 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
345 ewrt = _mm_mul_pd(r01,ewtabscale);
346 ewitab = _mm_cvttpd_epi32(ewrt);
347 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
348 ewitab = _mm_slli_epi32(ewitab,2);
349 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
350 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
351 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
352 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
353 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
354 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
355 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
356 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
357 velec = _mm_mul_pd(qq01,_mm_sub_pd(rinv01,velec));
358 felec = _mm_mul_pd(_mm_mul_pd(qq01,rinv01),_mm_sub_pd(rinvsq01,felec));
360 /* Update potential sum for this i atom from the interaction with this j atom. */
361 velecsum = _mm_add_pd(velecsum,velec);
365 /* Calculate temporary vectorial force */
366 tx = _mm_mul_pd(fscal,dx01);
367 ty = _mm_mul_pd(fscal,dy01);
368 tz = _mm_mul_pd(fscal,dz01);
370 /* Update vectorial force */
371 fix0 = _mm_add_pd(fix0,tx);
372 fiy0 = _mm_add_pd(fiy0,ty);
373 fiz0 = _mm_add_pd(fiz0,tz);
375 fjx1 = _mm_add_pd(fjx1,tx);
376 fjy1 = _mm_add_pd(fjy1,ty);
377 fjz1 = _mm_add_pd(fjz1,tz);
379 /**************************
380 * CALCULATE INTERACTIONS *
381 **************************/
383 r02 = _mm_mul_pd(rsq02,rinv02);
385 /* EWALD ELECTROSTATICS */
387 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
388 ewrt = _mm_mul_pd(r02,ewtabscale);
389 ewitab = _mm_cvttpd_epi32(ewrt);
390 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
391 ewitab = _mm_slli_epi32(ewitab,2);
392 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
393 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
394 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
395 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
396 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
397 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
398 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
399 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
400 velec = _mm_mul_pd(qq02,_mm_sub_pd(rinv02,velec));
401 felec = _mm_mul_pd(_mm_mul_pd(qq02,rinv02),_mm_sub_pd(rinvsq02,felec));
403 /* Update potential sum for this i atom from the interaction with this j atom. */
404 velecsum = _mm_add_pd(velecsum,velec);
408 /* Calculate temporary vectorial force */
409 tx = _mm_mul_pd(fscal,dx02);
410 ty = _mm_mul_pd(fscal,dy02);
411 tz = _mm_mul_pd(fscal,dz02);
413 /* Update vectorial force */
414 fix0 = _mm_add_pd(fix0,tx);
415 fiy0 = _mm_add_pd(fiy0,ty);
416 fiz0 = _mm_add_pd(fiz0,tz);
418 fjx2 = _mm_add_pd(fjx2,tx);
419 fjy2 = _mm_add_pd(fjy2,ty);
420 fjz2 = _mm_add_pd(fjz2,tz);
422 /**************************
423 * CALCULATE INTERACTIONS *
424 **************************/
426 r10 = _mm_mul_pd(rsq10,rinv10);
428 /* EWALD ELECTROSTATICS */
430 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
431 ewrt = _mm_mul_pd(r10,ewtabscale);
432 ewitab = _mm_cvttpd_epi32(ewrt);
433 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
434 ewitab = _mm_slli_epi32(ewitab,2);
435 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
436 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
437 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
438 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
439 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
440 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
441 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
442 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
443 velec = _mm_mul_pd(qq10,_mm_sub_pd(rinv10,velec));
444 felec = _mm_mul_pd(_mm_mul_pd(qq10,rinv10),_mm_sub_pd(rinvsq10,felec));
446 /* Update potential sum for this i atom from the interaction with this j atom. */
447 velecsum = _mm_add_pd(velecsum,velec);
451 /* Calculate temporary vectorial force */
452 tx = _mm_mul_pd(fscal,dx10);
453 ty = _mm_mul_pd(fscal,dy10);
454 tz = _mm_mul_pd(fscal,dz10);
456 /* Update vectorial force */
457 fix1 = _mm_add_pd(fix1,tx);
458 fiy1 = _mm_add_pd(fiy1,ty);
459 fiz1 = _mm_add_pd(fiz1,tz);
461 fjx0 = _mm_add_pd(fjx0,tx);
462 fjy0 = _mm_add_pd(fjy0,ty);
463 fjz0 = _mm_add_pd(fjz0,tz);
465 /**************************
466 * CALCULATE INTERACTIONS *
467 **************************/
469 r11 = _mm_mul_pd(rsq11,rinv11);
471 /* EWALD ELECTROSTATICS */
473 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
474 ewrt = _mm_mul_pd(r11,ewtabscale);
475 ewitab = _mm_cvttpd_epi32(ewrt);
476 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
477 ewitab = _mm_slli_epi32(ewitab,2);
478 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
479 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
480 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
481 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
482 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
483 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
484 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
485 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
486 velec = _mm_mul_pd(qq11,_mm_sub_pd(rinv11,velec));
487 felec = _mm_mul_pd(_mm_mul_pd(qq11,rinv11),_mm_sub_pd(rinvsq11,felec));
489 /* Update potential sum for this i atom from the interaction with this j atom. */
490 velecsum = _mm_add_pd(velecsum,velec);
494 /* Calculate temporary vectorial force */
495 tx = _mm_mul_pd(fscal,dx11);
496 ty = _mm_mul_pd(fscal,dy11);
497 tz = _mm_mul_pd(fscal,dz11);
499 /* Update vectorial force */
500 fix1 = _mm_add_pd(fix1,tx);
501 fiy1 = _mm_add_pd(fiy1,ty);
502 fiz1 = _mm_add_pd(fiz1,tz);
504 fjx1 = _mm_add_pd(fjx1,tx);
505 fjy1 = _mm_add_pd(fjy1,ty);
506 fjz1 = _mm_add_pd(fjz1,tz);
508 /**************************
509 * CALCULATE INTERACTIONS *
510 **************************/
512 r12 = _mm_mul_pd(rsq12,rinv12);
514 /* EWALD ELECTROSTATICS */
516 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
517 ewrt = _mm_mul_pd(r12,ewtabscale);
518 ewitab = _mm_cvttpd_epi32(ewrt);
519 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
520 ewitab = _mm_slli_epi32(ewitab,2);
521 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
522 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
523 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
524 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
525 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
526 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
527 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
528 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
529 velec = _mm_mul_pd(qq12,_mm_sub_pd(rinv12,velec));
530 felec = _mm_mul_pd(_mm_mul_pd(qq12,rinv12),_mm_sub_pd(rinvsq12,felec));
532 /* Update potential sum for this i atom from the interaction with this j atom. */
533 velecsum = _mm_add_pd(velecsum,velec);
537 /* Calculate temporary vectorial force */
538 tx = _mm_mul_pd(fscal,dx12);
539 ty = _mm_mul_pd(fscal,dy12);
540 tz = _mm_mul_pd(fscal,dz12);
542 /* Update vectorial force */
543 fix1 = _mm_add_pd(fix1,tx);
544 fiy1 = _mm_add_pd(fiy1,ty);
545 fiz1 = _mm_add_pd(fiz1,tz);
547 fjx2 = _mm_add_pd(fjx2,tx);
548 fjy2 = _mm_add_pd(fjy2,ty);
549 fjz2 = _mm_add_pd(fjz2,tz);
551 /**************************
552 * CALCULATE INTERACTIONS *
553 **************************/
555 r20 = _mm_mul_pd(rsq20,rinv20);
557 /* EWALD ELECTROSTATICS */
559 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
560 ewrt = _mm_mul_pd(r20,ewtabscale);
561 ewitab = _mm_cvttpd_epi32(ewrt);
562 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
563 ewitab = _mm_slli_epi32(ewitab,2);
564 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
565 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
566 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
567 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
568 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
569 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
570 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
571 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
572 velec = _mm_mul_pd(qq20,_mm_sub_pd(rinv20,velec));
573 felec = _mm_mul_pd(_mm_mul_pd(qq20,rinv20),_mm_sub_pd(rinvsq20,felec));
575 /* Update potential sum for this i atom from the interaction with this j atom. */
576 velecsum = _mm_add_pd(velecsum,velec);
580 /* Calculate temporary vectorial force */
581 tx = _mm_mul_pd(fscal,dx20);
582 ty = _mm_mul_pd(fscal,dy20);
583 tz = _mm_mul_pd(fscal,dz20);
585 /* Update vectorial force */
586 fix2 = _mm_add_pd(fix2,tx);
587 fiy2 = _mm_add_pd(fiy2,ty);
588 fiz2 = _mm_add_pd(fiz2,tz);
590 fjx0 = _mm_add_pd(fjx0,tx);
591 fjy0 = _mm_add_pd(fjy0,ty);
592 fjz0 = _mm_add_pd(fjz0,tz);
594 /**************************
595 * CALCULATE INTERACTIONS *
596 **************************/
598 r21 = _mm_mul_pd(rsq21,rinv21);
600 /* EWALD ELECTROSTATICS */
602 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
603 ewrt = _mm_mul_pd(r21,ewtabscale);
604 ewitab = _mm_cvttpd_epi32(ewrt);
605 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
606 ewitab = _mm_slli_epi32(ewitab,2);
607 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
608 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
609 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
610 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
611 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
612 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
613 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
614 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
615 velec = _mm_mul_pd(qq21,_mm_sub_pd(rinv21,velec));
616 felec = _mm_mul_pd(_mm_mul_pd(qq21,rinv21),_mm_sub_pd(rinvsq21,felec));
618 /* Update potential sum for this i atom from the interaction with this j atom. */
619 velecsum = _mm_add_pd(velecsum,velec);
623 /* Calculate temporary vectorial force */
624 tx = _mm_mul_pd(fscal,dx21);
625 ty = _mm_mul_pd(fscal,dy21);
626 tz = _mm_mul_pd(fscal,dz21);
628 /* Update vectorial force */
629 fix2 = _mm_add_pd(fix2,tx);
630 fiy2 = _mm_add_pd(fiy2,ty);
631 fiz2 = _mm_add_pd(fiz2,tz);
633 fjx1 = _mm_add_pd(fjx1,tx);
634 fjy1 = _mm_add_pd(fjy1,ty);
635 fjz1 = _mm_add_pd(fjz1,tz);
637 /**************************
638 * CALCULATE INTERACTIONS *
639 **************************/
641 r22 = _mm_mul_pd(rsq22,rinv22);
643 /* EWALD ELECTROSTATICS */
645 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
646 ewrt = _mm_mul_pd(r22,ewtabscale);
647 ewitab = _mm_cvttpd_epi32(ewrt);
648 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
649 ewitab = _mm_slli_epi32(ewitab,2);
650 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
651 ewtabD = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,1) );
652 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
653 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
654 ewtabFn = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,1) +2);
655 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
656 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
657 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
658 velec = _mm_mul_pd(qq22,_mm_sub_pd(rinv22,velec));
659 felec = _mm_mul_pd(_mm_mul_pd(qq22,rinv22),_mm_sub_pd(rinvsq22,felec));
661 /* Update potential sum for this i atom from the interaction with this j atom. */
662 velecsum = _mm_add_pd(velecsum,velec);
666 /* Calculate temporary vectorial force */
667 tx = _mm_mul_pd(fscal,dx22);
668 ty = _mm_mul_pd(fscal,dy22);
669 tz = _mm_mul_pd(fscal,dz22);
671 /* Update vectorial force */
672 fix2 = _mm_add_pd(fix2,tx);
673 fiy2 = _mm_add_pd(fiy2,ty);
674 fiz2 = _mm_add_pd(fiz2,tz);
676 fjx2 = _mm_add_pd(fjx2,tx);
677 fjy2 = _mm_add_pd(fjy2,ty);
678 fjz2 = _mm_add_pd(fjz2,tz);
680 gmx_mm_decrement_3rvec_2ptr_swizzle_pd(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
682 /* Inner loop uses 381 flops */
689 j_coord_offsetA = DIM*jnrA;
691 /* load j atom coordinates */
692 gmx_mm_load_3rvec_1ptr_swizzle_pd(x+j_coord_offsetA,
693 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
695 /* Calculate displacement vector */
696 dx00 = _mm_sub_pd(ix0,jx0);
697 dy00 = _mm_sub_pd(iy0,jy0);
698 dz00 = _mm_sub_pd(iz0,jz0);
699 dx01 = _mm_sub_pd(ix0,jx1);
700 dy01 = _mm_sub_pd(iy0,jy1);
701 dz01 = _mm_sub_pd(iz0,jz1);
702 dx02 = _mm_sub_pd(ix0,jx2);
703 dy02 = _mm_sub_pd(iy0,jy2);
704 dz02 = _mm_sub_pd(iz0,jz2);
705 dx10 = _mm_sub_pd(ix1,jx0);
706 dy10 = _mm_sub_pd(iy1,jy0);
707 dz10 = _mm_sub_pd(iz1,jz0);
708 dx11 = _mm_sub_pd(ix1,jx1);
709 dy11 = _mm_sub_pd(iy1,jy1);
710 dz11 = _mm_sub_pd(iz1,jz1);
711 dx12 = _mm_sub_pd(ix1,jx2);
712 dy12 = _mm_sub_pd(iy1,jy2);
713 dz12 = _mm_sub_pd(iz1,jz2);
714 dx20 = _mm_sub_pd(ix2,jx0);
715 dy20 = _mm_sub_pd(iy2,jy0);
716 dz20 = _mm_sub_pd(iz2,jz0);
717 dx21 = _mm_sub_pd(ix2,jx1);
718 dy21 = _mm_sub_pd(iy2,jy1);
719 dz21 = _mm_sub_pd(iz2,jz1);
720 dx22 = _mm_sub_pd(ix2,jx2);
721 dy22 = _mm_sub_pd(iy2,jy2);
722 dz22 = _mm_sub_pd(iz2,jz2);
724 /* Calculate squared distance and things based on it */
725 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
726 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
727 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
728 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
729 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
730 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
731 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
732 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
733 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
735 rinv00 = sse41_invsqrt_d(rsq00);
736 rinv01 = sse41_invsqrt_d(rsq01);
737 rinv02 = sse41_invsqrt_d(rsq02);
738 rinv10 = sse41_invsqrt_d(rsq10);
739 rinv11 = sse41_invsqrt_d(rsq11);
740 rinv12 = sse41_invsqrt_d(rsq12);
741 rinv20 = sse41_invsqrt_d(rsq20);
742 rinv21 = sse41_invsqrt_d(rsq21);
743 rinv22 = sse41_invsqrt_d(rsq22);
745 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
746 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
747 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
748 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
749 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
750 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
751 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
752 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
753 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
755 fjx0 = _mm_setzero_pd();
756 fjy0 = _mm_setzero_pd();
757 fjz0 = _mm_setzero_pd();
758 fjx1 = _mm_setzero_pd();
759 fjy1 = _mm_setzero_pd();
760 fjz1 = _mm_setzero_pd();
761 fjx2 = _mm_setzero_pd();
762 fjy2 = _mm_setzero_pd();
763 fjz2 = _mm_setzero_pd();
765 /**************************
766 * CALCULATE INTERACTIONS *
767 **************************/
769 r00 = _mm_mul_pd(rsq00,rinv00);
771 /* EWALD ELECTROSTATICS */
773 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
774 ewrt = _mm_mul_pd(r00,ewtabscale);
775 ewitab = _mm_cvttpd_epi32(ewrt);
776 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
777 ewitab = _mm_slli_epi32(ewitab,2);
778 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
779 ewtabD = _mm_setzero_pd();
780 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
781 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
782 ewtabFn = _mm_setzero_pd();
783 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
784 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
785 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
786 velec = _mm_mul_pd(qq00,_mm_sub_pd(rinv00,velec));
787 felec = _mm_mul_pd(_mm_mul_pd(qq00,rinv00),_mm_sub_pd(rinvsq00,felec));
789 /* LENNARD-JONES DISPERSION/REPULSION */
791 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
792 vvdw6 = _mm_mul_pd(c6_00,rinvsix);
793 vvdw12 = _mm_mul_pd(c12_00,_mm_mul_pd(rinvsix,rinvsix));
794 vvdw = _mm_sub_pd( _mm_mul_pd(vvdw12,one_twelfth) , _mm_mul_pd(vvdw6,one_sixth) );
795 fvdw = _mm_mul_pd(_mm_sub_pd(vvdw12,vvdw6),rinvsq00);
797 /* Update potential sum for this i atom from the interaction with this j atom. */
798 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
799 velecsum = _mm_add_pd(velecsum,velec);
800 vvdw = _mm_unpacklo_pd(vvdw,_mm_setzero_pd());
801 vvdwsum = _mm_add_pd(vvdwsum,vvdw);
803 fscal = _mm_add_pd(felec,fvdw);
805 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
807 /* Calculate temporary vectorial force */
808 tx = _mm_mul_pd(fscal,dx00);
809 ty = _mm_mul_pd(fscal,dy00);
810 tz = _mm_mul_pd(fscal,dz00);
812 /* Update vectorial force */
813 fix0 = _mm_add_pd(fix0,tx);
814 fiy0 = _mm_add_pd(fiy0,ty);
815 fiz0 = _mm_add_pd(fiz0,tz);
817 fjx0 = _mm_add_pd(fjx0,tx);
818 fjy0 = _mm_add_pd(fjy0,ty);
819 fjz0 = _mm_add_pd(fjz0,tz);
821 /**************************
822 * CALCULATE INTERACTIONS *
823 **************************/
825 r01 = _mm_mul_pd(rsq01,rinv01);
827 /* EWALD ELECTROSTATICS */
829 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
830 ewrt = _mm_mul_pd(r01,ewtabscale);
831 ewitab = _mm_cvttpd_epi32(ewrt);
832 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
833 ewitab = _mm_slli_epi32(ewitab,2);
834 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
835 ewtabD = _mm_setzero_pd();
836 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
837 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
838 ewtabFn = _mm_setzero_pd();
839 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
840 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
841 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
842 velec = _mm_mul_pd(qq01,_mm_sub_pd(rinv01,velec));
843 felec = _mm_mul_pd(_mm_mul_pd(qq01,rinv01),_mm_sub_pd(rinvsq01,felec));
845 /* Update potential sum for this i atom from the interaction with this j atom. */
846 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
847 velecsum = _mm_add_pd(velecsum,velec);
851 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
853 /* Calculate temporary vectorial force */
854 tx = _mm_mul_pd(fscal,dx01);
855 ty = _mm_mul_pd(fscal,dy01);
856 tz = _mm_mul_pd(fscal,dz01);
858 /* Update vectorial force */
859 fix0 = _mm_add_pd(fix0,tx);
860 fiy0 = _mm_add_pd(fiy0,ty);
861 fiz0 = _mm_add_pd(fiz0,tz);
863 fjx1 = _mm_add_pd(fjx1,tx);
864 fjy1 = _mm_add_pd(fjy1,ty);
865 fjz1 = _mm_add_pd(fjz1,tz);
867 /**************************
868 * CALCULATE INTERACTIONS *
869 **************************/
871 r02 = _mm_mul_pd(rsq02,rinv02);
873 /* EWALD ELECTROSTATICS */
875 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
876 ewrt = _mm_mul_pd(r02,ewtabscale);
877 ewitab = _mm_cvttpd_epi32(ewrt);
878 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
879 ewitab = _mm_slli_epi32(ewitab,2);
880 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
881 ewtabD = _mm_setzero_pd();
882 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
883 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
884 ewtabFn = _mm_setzero_pd();
885 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
886 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
887 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
888 velec = _mm_mul_pd(qq02,_mm_sub_pd(rinv02,velec));
889 felec = _mm_mul_pd(_mm_mul_pd(qq02,rinv02),_mm_sub_pd(rinvsq02,felec));
891 /* Update potential sum for this i atom from the interaction with this j atom. */
892 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
893 velecsum = _mm_add_pd(velecsum,velec);
897 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
899 /* Calculate temporary vectorial force */
900 tx = _mm_mul_pd(fscal,dx02);
901 ty = _mm_mul_pd(fscal,dy02);
902 tz = _mm_mul_pd(fscal,dz02);
904 /* Update vectorial force */
905 fix0 = _mm_add_pd(fix0,tx);
906 fiy0 = _mm_add_pd(fiy0,ty);
907 fiz0 = _mm_add_pd(fiz0,tz);
909 fjx2 = _mm_add_pd(fjx2,tx);
910 fjy2 = _mm_add_pd(fjy2,ty);
911 fjz2 = _mm_add_pd(fjz2,tz);
913 /**************************
914 * CALCULATE INTERACTIONS *
915 **************************/
917 r10 = _mm_mul_pd(rsq10,rinv10);
919 /* EWALD ELECTROSTATICS */
921 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
922 ewrt = _mm_mul_pd(r10,ewtabscale);
923 ewitab = _mm_cvttpd_epi32(ewrt);
924 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
925 ewitab = _mm_slli_epi32(ewitab,2);
926 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
927 ewtabD = _mm_setzero_pd();
928 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
929 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
930 ewtabFn = _mm_setzero_pd();
931 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
932 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
933 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
934 velec = _mm_mul_pd(qq10,_mm_sub_pd(rinv10,velec));
935 felec = _mm_mul_pd(_mm_mul_pd(qq10,rinv10),_mm_sub_pd(rinvsq10,felec));
937 /* Update potential sum for this i atom from the interaction with this j atom. */
938 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
939 velecsum = _mm_add_pd(velecsum,velec);
943 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
945 /* Calculate temporary vectorial force */
946 tx = _mm_mul_pd(fscal,dx10);
947 ty = _mm_mul_pd(fscal,dy10);
948 tz = _mm_mul_pd(fscal,dz10);
950 /* Update vectorial force */
951 fix1 = _mm_add_pd(fix1,tx);
952 fiy1 = _mm_add_pd(fiy1,ty);
953 fiz1 = _mm_add_pd(fiz1,tz);
955 fjx0 = _mm_add_pd(fjx0,tx);
956 fjy0 = _mm_add_pd(fjy0,ty);
957 fjz0 = _mm_add_pd(fjz0,tz);
959 /**************************
960 * CALCULATE INTERACTIONS *
961 **************************/
963 r11 = _mm_mul_pd(rsq11,rinv11);
965 /* EWALD ELECTROSTATICS */
967 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
968 ewrt = _mm_mul_pd(r11,ewtabscale);
969 ewitab = _mm_cvttpd_epi32(ewrt);
970 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
971 ewitab = _mm_slli_epi32(ewitab,2);
972 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
973 ewtabD = _mm_setzero_pd();
974 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
975 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
976 ewtabFn = _mm_setzero_pd();
977 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
978 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
979 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
980 velec = _mm_mul_pd(qq11,_mm_sub_pd(rinv11,velec));
981 felec = _mm_mul_pd(_mm_mul_pd(qq11,rinv11),_mm_sub_pd(rinvsq11,felec));
983 /* Update potential sum for this i atom from the interaction with this j atom. */
984 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
985 velecsum = _mm_add_pd(velecsum,velec);
989 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
991 /* Calculate temporary vectorial force */
992 tx = _mm_mul_pd(fscal,dx11);
993 ty = _mm_mul_pd(fscal,dy11);
994 tz = _mm_mul_pd(fscal,dz11);
996 /* Update vectorial force */
997 fix1 = _mm_add_pd(fix1,tx);
998 fiy1 = _mm_add_pd(fiy1,ty);
999 fiz1 = _mm_add_pd(fiz1,tz);
1001 fjx1 = _mm_add_pd(fjx1,tx);
1002 fjy1 = _mm_add_pd(fjy1,ty);
1003 fjz1 = _mm_add_pd(fjz1,tz);
1005 /**************************
1006 * CALCULATE INTERACTIONS *
1007 **************************/
1009 r12 = _mm_mul_pd(rsq12,rinv12);
1011 /* EWALD ELECTROSTATICS */
1013 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1014 ewrt = _mm_mul_pd(r12,ewtabscale);
1015 ewitab = _mm_cvttpd_epi32(ewrt);
1016 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1017 ewitab = _mm_slli_epi32(ewitab,2);
1018 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1019 ewtabD = _mm_setzero_pd();
1020 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
1021 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
1022 ewtabFn = _mm_setzero_pd();
1023 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
1024 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
1025 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
1026 velec = _mm_mul_pd(qq12,_mm_sub_pd(rinv12,velec));
1027 felec = _mm_mul_pd(_mm_mul_pd(qq12,rinv12),_mm_sub_pd(rinvsq12,felec));
1029 /* Update potential sum for this i atom from the interaction with this j atom. */
1030 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
1031 velecsum = _mm_add_pd(velecsum,velec);
1035 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1037 /* Calculate temporary vectorial force */
1038 tx = _mm_mul_pd(fscal,dx12);
1039 ty = _mm_mul_pd(fscal,dy12);
1040 tz = _mm_mul_pd(fscal,dz12);
1042 /* Update vectorial force */
1043 fix1 = _mm_add_pd(fix1,tx);
1044 fiy1 = _mm_add_pd(fiy1,ty);
1045 fiz1 = _mm_add_pd(fiz1,tz);
1047 fjx2 = _mm_add_pd(fjx2,tx);
1048 fjy2 = _mm_add_pd(fjy2,ty);
1049 fjz2 = _mm_add_pd(fjz2,tz);
1051 /**************************
1052 * CALCULATE INTERACTIONS *
1053 **************************/
1055 r20 = _mm_mul_pd(rsq20,rinv20);
1057 /* EWALD ELECTROSTATICS */
1059 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1060 ewrt = _mm_mul_pd(r20,ewtabscale);
1061 ewitab = _mm_cvttpd_epi32(ewrt);
1062 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1063 ewitab = _mm_slli_epi32(ewitab,2);
1064 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1065 ewtabD = _mm_setzero_pd();
1066 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
1067 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
1068 ewtabFn = _mm_setzero_pd();
1069 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
1070 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
1071 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
1072 velec = _mm_mul_pd(qq20,_mm_sub_pd(rinv20,velec));
1073 felec = _mm_mul_pd(_mm_mul_pd(qq20,rinv20),_mm_sub_pd(rinvsq20,felec));
1075 /* Update potential sum for this i atom from the interaction with this j atom. */
1076 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
1077 velecsum = _mm_add_pd(velecsum,velec);
1081 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1083 /* Calculate temporary vectorial force */
1084 tx = _mm_mul_pd(fscal,dx20);
1085 ty = _mm_mul_pd(fscal,dy20);
1086 tz = _mm_mul_pd(fscal,dz20);
1088 /* Update vectorial force */
1089 fix2 = _mm_add_pd(fix2,tx);
1090 fiy2 = _mm_add_pd(fiy2,ty);
1091 fiz2 = _mm_add_pd(fiz2,tz);
1093 fjx0 = _mm_add_pd(fjx0,tx);
1094 fjy0 = _mm_add_pd(fjy0,ty);
1095 fjz0 = _mm_add_pd(fjz0,tz);
1097 /**************************
1098 * CALCULATE INTERACTIONS *
1099 **************************/
1101 r21 = _mm_mul_pd(rsq21,rinv21);
1103 /* EWALD ELECTROSTATICS */
1105 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1106 ewrt = _mm_mul_pd(r21,ewtabscale);
1107 ewitab = _mm_cvttpd_epi32(ewrt);
1108 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1109 ewitab = _mm_slli_epi32(ewitab,2);
1110 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1111 ewtabD = _mm_setzero_pd();
1112 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
1113 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
1114 ewtabFn = _mm_setzero_pd();
1115 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
1116 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
1117 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
1118 velec = _mm_mul_pd(qq21,_mm_sub_pd(rinv21,velec));
1119 felec = _mm_mul_pd(_mm_mul_pd(qq21,rinv21),_mm_sub_pd(rinvsq21,felec));
1121 /* Update potential sum for this i atom from the interaction with this j atom. */
1122 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
1123 velecsum = _mm_add_pd(velecsum,velec);
1127 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1129 /* Calculate temporary vectorial force */
1130 tx = _mm_mul_pd(fscal,dx21);
1131 ty = _mm_mul_pd(fscal,dy21);
1132 tz = _mm_mul_pd(fscal,dz21);
1134 /* Update vectorial force */
1135 fix2 = _mm_add_pd(fix2,tx);
1136 fiy2 = _mm_add_pd(fiy2,ty);
1137 fiz2 = _mm_add_pd(fiz2,tz);
1139 fjx1 = _mm_add_pd(fjx1,tx);
1140 fjy1 = _mm_add_pd(fjy1,ty);
1141 fjz1 = _mm_add_pd(fjz1,tz);
1143 /**************************
1144 * CALCULATE INTERACTIONS *
1145 **************************/
1147 r22 = _mm_mul_pd(rsq22,rinv22);
1149 /* EWALD ELECTROSTATICS */
1151 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1152 ewrt = _mm_mul_pd(r22,ewtabscale);
1153 ewitab = _mm_cvttpd_epi32(ewrt);
1154 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1155 ewitab = _mm_slli_epi32(ewitab,2);
1156 ewtabF = _mm_load_pd( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1157 ewtabD = _mm_setzero_pd();
1158 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
1159 ewtabV = _mm_load_sd( ewtab + gmx_mm_extract_epi32(ewitab,0) +2);
1160 ewtabFn = _mm_setzero_pd();
1161 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
1162 felec = _mm_add_pd(ewtabF,_mm_mul_pd(eweps,ewtabD));
1163 velec = _mm_sub_pd(ewtabV,_mm_mul_pd(_mm_mul_pd(ewtabhalfspace,eweps),_mm_add_pd(ewtabF,felec)));
1164 velec = _mm_mul_pd(qq22,_mm_sub_pd(rinv22,velec));
1165 felec = _mm_mul_pd(_mm_mul_pd(qq22,rinv22),_mm_sub_pd(rinvsq22,felec));
1167 /* Update potential sum for this i atom from the interaction with this j atom. */
1168 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
1169 velecsum = _mm_add_pd(velecsum,velec);
1173 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1175 /* Calculate temporary vectorial force */
1176 tx = _mm_mul_pd(fscal,dx22);
1177 ty = _mm_mul_pd(fscal,dy22);
1178 tz = _mm_mul_pd(fscal,dz22);
1180 /* Update vectorial force */
1181 fix2 = _mm_add_pd(fix2,tx);
1182 fiy2 = _mm_add_pd(fiy2,ty);
1183 fiz2 = _mm_add_pd(fiz2,tz);
1185 fjx2 = _mm_add_pd(fjx2,tx);
1186 fjy2 = _mm_add_pd(fjy2,ty);
1187 fjz2 = _mm_add_pd(fjz2,tz);
1189 gmx_mm_decrement_3rvec_1ptr_swizzle_pd(f+j_coord_offsetA,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1191 /* Inner loop uses 381 flops */
1194 /* End of innermost loop */
1196 gmx_mm_update_iforce_3atom_swizzle_pd(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1197 f+i_coord_offset,fshift+i_shift_offset);
1200 /* Update potential energies */
1201 gmx_mm_update_1pot_pd(velecsum,kernel_data->energygrp_elec+ggid);
1202 gmx_mm_update_1pot_pd(vvdwsum,kernel_data->energygrp_vdw+ggid);
1204 /* Increment number of inner iterations */
1205 inneriter += j_index_end - j_index_start;
1207 /* Outer loop uses 20 flops */
1210 /* Increment number of outer iterations */
1213 /* Update outer/inner flops */
1215 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_VF,outeriter*20 + inneriter*381);
1218 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwLJ_GeomW3W3_F_sse4_1_double
1219 * Electrostatics interaction: Ewald
1220 * VdW interaction: LennardJones
1221 * Geometry: Water3-Water3
1222 * Calculate force/pot: Force
1225 nb_kernel_ElecEw_VdwLJ_GeomW3W3_F_sse4_1_double
1226 (t_nblist * gmx_restrict nlist,
1227 rvec * gmx_restrict xx,
1228 rvec * gmx_restrict ff,
1229 struct t_forcerec * gmx_restrict fr,
1230 t_mdatoms * gmx_restrict mdatoms,
1231 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
1232 t_nrnb * gmx_restrict nrnb)
1234 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
1235 * just 0 for non-waters.
1236 * Suffixes A,B refer to j loop unrolling done with SSE double precision, e.g. for the two different
1237 * jnr indices corresponding to data put in the four positions in the SIMD register.
1239 int i_shift_offset,i_coord_offset,outeriter,inneriter;
1240 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1242 int j_coord_offsetA,j_coord_offsetB;
1243 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
1244 real rcutoff_scalar;
1245 real *shiftvec,*fshift,*x,*f;
1246 __m128d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
1248 __m128d ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
1250 __m128d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1252 __m128d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1253 int vdwjidx0A,vdwjidx0B;
1254 __m128d jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
1255 int vdwjidx1A,vdwjidx1B;
1256 __m128d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1257 int vdwjidx2A,vdwjidx2B;
1258 __m128d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1259 __m128d dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
1260 __m128d dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
1261 __m128d dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
1262 __m128d dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
1263 __m128d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1264 __m128d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1265 __m128d dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
1266 __m128d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1267 __m128d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1268 __m128d velec,felec,velecsum,facel,crf,krf,krf2;
1271 __m128d rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
1274 __m128d one_sixth = _mm_set1_pd(1.0/6.0);
1275 __m128d one_twelfth = _mm_set1_pd(1.0/12.0);
1277 __m128d ewtabscale,eweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
1279 __m128d dummy_mask,cutoff_mask;
1280 __m128d signbit = gmx_mm_castsi128_pd( _mm_set_epi32(0x80000000,0x00000000,0x80000000,0x00000000) );
1281 __m128d one = _mm_set1_pd(1.0);
1282 __m128d two = _mm_set1_pd(2.0);
1288 jindex = nlist->jindex;
1290 shiftidx = nlist->shift;
1292 shiftvec = fr->shift_vec[0];
1293 fshift = fr->fshift[0];
1294 facel = _mm_set1_pd(fr->ic->epsfac);
1295 charge = mdatoms->chargeA;
1296 nvdwtype = fr->ntype;
1297 vdwparam = fr->nbfp;
1298 vdwtype = mdatoms->typeA;
1300 sh_ewald = _mm_set1_pd(fr->ic->sh_ewald);
1301 ewtab = fr->ic->tabq_coul_F;
1302 ewtabscale = _mm_set1_pd(fr->ic->tabq_scale);
1303 ewtabhalfspace = _mm_set1_pd(0.5/fr->ic->tabq_scale);
1305 /* Setup water-specific parameters */
1306 inr = nlist->iinr[0];
1307 iq0 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+0]));
1308 iq1 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+1]));
1309 iq2 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+2]));
1310 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
1312 jq0 = _mm_set1_pd(charge[inr+0]);
1313 jq1 = _mm_set1_pd(charge[inr+1]);
1314 jq2 = _mm_set1_pd(charge[inr+2]);
1315 vdwjidx0A = 2*vdwtype[inr+0];
1316 qq00 = _mm_mul_pd(iq0,jq0);
1317 c6_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A]);
1318 c12_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A+1]);
1319 qq01 = _mm_mul_pd(iq0,jq1);
1320 qq02 = _mm_mul_pd(iq0,jq2);
1321 qq10 = _mm_mul_pd(iq1,jq0);
1322 qq11 = _mm_mul_pd(iq1,jq1);
1323 qq12 = _mm_mul_pd(iq1,jq2);
1324 qq20 = _mm_mul_pd(iq2,jq0);
1325 qq21 = _mm_mul_pd(iq2,jq1);
1326 qq22 = _mm_mul_pd(iq2,jq2);
1328 /* Avoid stupid compiler warnings */
1330 j_coord_offsetA = 0;
1331 j_coord_offsetB = 0;
1336 /* Start outer loop over neighborlists */
1337 for(iidx=0; iidx<nri; iidx++)
1339 /* Load shift vector for this list */
1340 i_shift_offset = DIM*shiftidx[iidx];
1342 /* Load limits for loop over neighbors */
1343 j_index_start = jindex[iidx];
1344 j_index_end = jindex[iidx+1];
1346 /* Get outer coordinate index */
1348 i_coord_offset = DIM*inr;
1350 /* Load i particle coords and add shift vector */
1351 gmx_mm_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset,
1352 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
1354 fix0 = _mm_setzero_pd();
1355 fiy0 = _mm_setzero_pd();
1356 fiz0 = _mm_setzero_pd();
1357 fix1 = _mm_setzero_pd();
1358 fiy1 = _mm_setzero_pd();
1359 fiz1 = _mm_setzero_pd();
1360 fix2 = _mm_setzero_pd();
1361 fiy2 = _mm_setzero_pd();
1362 fiz2 = _mm_setzero_pd();
1364 /* Start inner kernel loop */
1365 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
1368 /* Get j neighbor index, and coordinate index */
1370 jnrB = jjnr[jidx+1];
1371 j_coord_offsetA = DIM*jnrA;
1372 j_coord_offsetB = DIM*jnrB;
1374 /* load j atom coordinates */
1375 gmx_mm_load_3rvec_2ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
1376 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1378 /* Calculate displacement vector */
1379 dx00 = _mm_sub_pd(ix0,jx0);
1380 dy00 = _mm_sub_pd(iy0,jy0);
1381 dz00 = _mm_sub_pd(iz0,jz0);
1382 dx01 = _mm_sub_pd(ix0,jx1);
1383 dy01 = _mm_sub_pd(iy0,jy1);
1384 dz01 = _mm_sub_pd(iz0,jz1);
1385 dx02 = _mm_sub_pd(ix0,jx2);
1386 dy02 = _mm_sub_pd(iy0,jy2);
1387 dz02 = _mm_sub_pd(iz0,jz2);
1388 dx10 = _mm_sub_pd(ix1,jx0);
1389 dy10 = _mm_sub_pd(iy1,jy0);
1390 dz10 = _mm_sub_pd(iz1,jz0);
1391 dx11 = _mm_sub_pd(ix1,jx1);
1392 dy11 = _mm_sub_pd(iy1,jy1);
1393 dz11 = _mm_sub_pd(iz1,jz1);
1394 dx12 = _mm_sub_pd(ix1,jx2);
1395 dy12 = _mm_sub_pd(iy1,jy2);
1396 dz12 = _mm_sub_pd(iz1,jz2);
1397 dx20 = _mm_sub_pd(ix2,jx0);
1398 dy20 = _mm_sub_pd(iy2,jy0);
1399 dz20 = _mm_sub_pd(iz2,jz0);
1400 dx21 = _mm_sub_pd(ix2,jx1);
1401 dy21 = _mm_sub_pd(iy2,jy1);
1402 dz21 = _mm_sub_pd(iz2,jz1);
1403 dx22 = _mm_sub_pd(ix2,jx2);
1404 dy22 = _mm_sub_pd(iy2,jy2);
1405 dz22 = _mm_sub_pd(iz2,jz2);
1407 /* Calculate squared distance and things based on it */
1408 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
1409 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
1410 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
1411 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
1412 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
1413 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
1414 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
1415 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
1416 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
1418 rinv00 = sse41_invsqrt_d(rsq00);
1419 rinv01 = sse41_invsqrt_d(rsq01);
1420 rinv02 = sse41_invsqrt_d(rsq02);
1421 rinv10 = sse41_invsqrt_d(rsq10);
1422 rinv11 = sse41_invsqrt_d(rsq11);
1423 rinv12 = sse41_invsqrt_d(rsq12);
1424 rinv20 = sse41_invsqrt_d(rsq20);
1425 rinv21 = sse41_invsqrt_d(rsq21);
1426 rinv22 = sse41_invsqrt_d(rsq22);
1428 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
1429 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
1430 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
1431 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
1432 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
1433 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
1434 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
1435 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
1436 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
1438 fjx0 = _mm_setzero_pd();
1439 fjy0 = _mm_setzero_pd();
1440 fjz0 = _mm_setzero_pd();
1441 fjx1 = _mm_setzero_pd();
1442 fjy1 = _mm_setzero_pd();
1443 fjz1 = _mm_setzero_pd();
1444 fjx2 = _mm_setzero_pd();
1445 fjy2 = _mm_setzero_pd();
1446 fjz2 = _mm_setzero_pd();
1448 /**************************
1449 * CALCULATE INTERACTIONS *
1450 **************************/
1452 r00 = _mm_mul_pd(rsq00,rinv00);
1454 /* EWALD ELECTROSTATICS */
1456 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1457 ewrt = _mm_mul_pd(r00,ewtabscale);
1458 ewitab = _mm_cvttpd_epi32(ewrt);
1459 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1460 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1462 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1463 felec = _mm_mul_pd(_mm_mul_pd(qq00,rinv00),_mm_sub_pd(rinvsq00,felec));
1465 /* LENNARD-JONES DISPERSION/REPULSION */
1467 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
1468 fvdw = _mm_mul_pd(_mm_sub_pd(_mm_mul_pd(c12_00,rinvsix),c6_00),_mm_mul_pd(rinvsix,rinvsq00));
1470 fscal = _mm_add_pd(felec,fvdw);
1472 /* Calculate temporary vectorial force */
1473 tx = _mm_mul_pd(fscal,dx00);
1474 ty = _mm_mul_pd(fscal,dy00);
1475 tz = _mm_mul_pd(fscal,dz00);
1477 /* Update vectorial force */
1478 fix0 = _mm_add_pd(fix0,tx);
1479 fiy0 = _mm_add_pd(fiy0,ty);
1480 fiz0 = _mm_add_pd(fiz0,tz);
1482 fjx0 = _mm_add_pd(fjx0,tx);
1483 fjy0 = _mm_add_pd(fjy0,ty);
1484 fjz0 = _mm_add_pd(fjz0,tz);
1486 /**************************
1487 * CALCULATE INTERACTIONS *
1488 **************************/
1490 r01 = _mm_mul_pd(rsq01,rinv01);
1492 /* EWALD ELECTROSTATICS */
1494 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1495 ewrt = _mm_mul_pd(r01,ewtabscale);
1496 ewitab = _mm_cvttpd_epi32(ewrt);
1497 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1498 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1500 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1501 felec = _mm_mul_pd(_mm_mul_pd(qq01,rinv01),_mm_sub_pd(rinvsq01,felec));
1505 /* Calculate temporary vectorial force */
1506 tx = _mm_mul_pd(fscal,dx01);
1507 ty = _mm_mul_pd(fscal,dy01);
1508 tz = _mm_mul_pd(fscal,dz01);
1510 /* Update vectorial force */
1511 fix0 = _mm_add_pd(fix0,tx);
1512 fiy0 = _mm_add_pd(fiy0,ty);
1513 fiz0 = _mm_add_pd(fiz0,tz);
1515 fjx1 = _mm_add_pd(fjx1,tx);
1516 fjy1 = _mm_add_pd(fjy1,ty);
1517 fjz1 = _mm_add_pd(fjz1,tz);
1519 /**************************
1520 * CALCULATE INTERACTIONS *
1521 **************************/
1523 r02 = _mm_mul_pd(rsq02,rinv02);
1525 /* EWALD ELECTROSTATICS */
1527 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1528 ewrt = _mm_mul_pd(r02,ewtabscale);
1529 ewitab = _mm_cvttpd_epi32(ewrt);
1530 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1531 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1533 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1534 felec = _mm_mul_pd(_mm_mul_pd(qq02,rinv02),_mm_sub_pd(rinvsq02,felec));
1538 /* Calculate temporary vectorial force */
1539 tx = _mm_mul_pd(fscal,dx02);
1540 ty = _mm_mul_pd(fscal,dy02);
1541 tz = _mm_mul_pd(fscal,dz02);
1543 /* Update vectorial force */
1544 fix0 = _mm_add_pd(fix0,tx);
1545 fiy0 = _mm_add_pd(fiy0,ty);
1546 fiz0 = _mm_add_pd(fiz0,tz);
1548 fjx2 = _mm_add_pd(fjx2,tx);
1549 fjy2 = _mm_add_pd(fjy2,ty);
1550 fjz2 = _mm_add_pd(fjz2,tz);
1552 /**************************
1553 * CALCULATE INTERACTIONS *
1554 **************************/
1556 r10 = _mm_mul_pd(rsq10,rinv10);
1558 /* EWALD ELECTROSTATICS */
1560 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1561 ewrt = _mm_mul_pd(r10,ewtabscale);
1562 ewitab = _mm_cvttpd_epi32(ewrt);
1563 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1564 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1566 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1567 felec = _mm_mul_pd(_mm_mul_pd(qq10,rinv10),_mm_sub_pd(rinvsq10,felec));
1571 /* Calculate temporary vectorial force */
1572 tx = _mm_mul_pd(fscal,dx10);
1573 ty = _mm_mul_pd(fscal,dy10);
1574 tz = _mm_mul_pd(fscal,dz10);
1576 /* Update vectorial force */
1577 fix1 = _mm_add_pd(fix1,tx);
1578 fiy1 = _mm_add_pd(fiy1,ty);
1579 fiz1 = _mm_add_pd(fiz1,tz);
1581 fjx0 = _mm_add_pd(fjx0,tx);
1582 fjy0 = _mm_add_pd(fjy0,ty);
1583 fjz0 = _mm_add_pd(fjz0,tz);
1585 /**************************
1586 * CALCULATE INTERACTIONS *
1587 **************************/
1589 r11 = _mm_mul_pd(rsq11,rinv11);
1591 /* EWALD ELECTROSTATICS */
1593 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1594 ewrt = _mm_mul_pd(r11,ewtabscale);
1595 ewitab = _mm_cvttpd_epi32(ewrt);
1596 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1597 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1599 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1600 felec = _mm_mul_pd(_mm_mul_pd(qq11,rinv11),_mm_sub_pd(rinvsq11,felec));
1604 /* Calculate temporary vectorial force */
1605 tx = _mm_mul_pd(fscal,dx11);
1606 ty = _mm_mul_pd(fscal,dy11);
1607 tz = _mm_mul_pd(fscal,dz11);
1609 /* Update vectorial force */
1610 fix1 = _mm_add_pd(fix1,tx);
1611 fiy1 = _mm_add_pd(fiy1,ty);
1612 fiz1 = _mm_add_pd(fiz1,tz);
1614 fjx1 = _mm_add_pd(fjx1,tx);
1615 fjy1 = _mm_add_pd(fjy1,ty);
1616 fjz1 = _mm_add_pd(fjz1,tz);
1618 /**************************
1619 * CALCULATE INTERACTIONS *
1620 **************************/
1622 r12 = _mm_mul_pd(rsq12,rinv12);
1624 /* EWALD ELECTROSTATICS */
1626 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1627 ewrt = _mm_mul_pd(r12,ewtabscale);
1628 ewitab = _mm_cvttpd_epi32(ewrt);
1629 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1630 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1632 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1633 felec = _mm_mul_pd(_mm_mul_pd(qq12,rinv12),_mm_sub_pd(rinvsq12,felec));
1637 /* Calculate temporary vectorial force */
1638 tx = _mm_mul_pd(fscal,dx12);
1639 ty = _mm_mul_pd(fscal,dy12);
1640 tz = _mm_mul_pd(fscal,dz12);
1642 /* Update vectorial force */
1643 fix1 = _mm_add_pd(fix1,tx);
1644 fiy1 = _mm_add_pd(fiy1,ty);
1645 fiz1 = _mm_add_pd(fiz1,tz);
1647 fjx2 = _mm_add_pd(fjx2,tx);
1648 fjy2 = _mm_add_pd(fjy2,ty);
1649 fjz2 = _mm_add_pd(fjz2,tz);
1651 /**************************
1652 * CALCULATE INTERACTIONS *
1653 **************************/
1655 r20 = _mm_mul_pd(rsq20,rinv20);
1657 /* EWALD ELECTROSTATICS */
1659 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1660 ewrt = _mm_mul_pd(r20,ewtabscale);
1661 ewitab = _mm_cvttpd_epi32(ewrt);
1662 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1663 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1665 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1666 felec = _mm_mul_pd(_mm_mul_pd(qq20,rinv20),_mm_sub_pd(rinvsq20,felec));
1670 /* Calculate temporary vectorial force */
1671 tx = _mm_mul_pd(fscal,dx20);
1672 ty = _mm_mul_pd(fscal,dy20);
1673 tz = _mm_mul_pd(fscal,dz20);
1675 /* Update vectorial force */
1676 fix2 = _mm_add_pd(fix2,tx);
1677 fiy2 = _mm_add_pd(fiy2,ty);
1678 fiz2 = _mm_add_pd(fiz2,tz);
1680 fjx0 = _mm_add_pd(fjx0,tx);
1681 fjy0 = _mm_add_pd(fjy0,ty);
1682 fjz0 = _mm_add_pd(fjz0,tz);
1684 /**************************
1685 * CALCULATE INTERACTIONS *
1686 **************************/
1688 r21 = _mm_mul_pd(rsq21,rinv21);
1690 /* EWALD ELECTROSTATICS */
1692 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1693 ewrt = _mm_mul_pd(r21,ewtabscale);
1694 ewitab = _mm_cvttpd_epi32(ewrt);
1695 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1696 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1698 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1699 felec = _mm_mul_pd(_mm_mul_pd(qq21,rinv21),_mm_sub_pd(rinvsq21,felec));
1703 /* Calculate temporary vectorial force */
1704 tx = _mm_mul_pd(fscal,dx21);
1705 ty = _mm_mul_pd(fscal,dy21);
1706 tz = _mm_mul_pd(fscal,dz21);
1708 /* Update vectorial force */
1709 fix2 = _mm_add_pd(fix2,tx);
1710 fiy2 = _mm_add_pd(fiy2,ty);
1711 fiz2 = _mm_add_pd(fiz2,tz);
1713 fjx1 = _mm_add_pd(fjx1,tx);
1714 fjy1 = _mm_add_pd(fjy1,ty);
1715 fjz1 = _mm_add_pd(fjz1,tz);
1717 /**************************
1718 * CALCULATE INTERACTIONS *
1719 **************************/
1721 r22 = _mm_mul_pd(rsq22,rinv22);
1723 /* EWALD ELECTROSTATICS */
1725 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1726 ewrt = _mm_mul_pd(r22,ewtabscale);
1727 ewitab = _mm_cvttpd_epi32(ewrt);
1728 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1729 gmx_mm_load_2pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1731 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1732 felec = _mm_mul_pd(_mm_mul_pd(qq22,rinv22),_mm_sub_pd(rinvsq22,felec));
1736 /* Calculate temporary vectorial force */
1737 tx = _mm_mul_pd(fscal,dx22);
1738 ty = _mm_mul_pd(fscal,dy22);
1739 tz = _mm_mul_pd(fscal,dz22);
1741 /* Update vectorial force */
1742 fix2 = _mm_add_pd(fix2,tx);
1743 fiy2 = _mm_add_pd(fiy2,ty);
1744 fiz2 = _mm_add_pd(fiz2,tz);
1746 fjx2 = _mm_add_pd(fjx2,tx);
1747 fjy2 = _mm_add_pd(fjy2,ty);
1748 fjz2 = _mm_add_pd(fjz2,tz);
1750 gmx_mm_decrement_3rvec_2ptr_swizzle_pd(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1752 /* Inner loop uses 331 flops */
1755 if(jidx<j_index_end)
1759 j_coord_offsetA = DIM*jnrA;
1761 /* load j atom coordinates */
1762 gmx_mm_load_3rvec_1ptr_swizzle_pd(x+j_coord_offsetA,
1763 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1765 /* Calculate displacement vector */
1766 dx00 = _mm_sub_pd(ix0,jx0);
1767 dy00 = _mm_sub_pd(iy0,jy0);
1768 dz00 = _mm_sub_pd(iz0,jz0);
1769 dx01 = _mm_sub_pd(ix0,jx1);
1770 dy01 = _mm_sub_pd(iy0,jy1);
1771 dz01 = _mm_sub_pd(iz0,jz1);
1772 dx02 = _mm_sub_pd(ix0,jx2);
1773 dy02 = _mm_sub_pd(iy0,jy2);
1774 dz02 = _mm_sub_pd(iz0,jz2);
1775 dx10 = _mm_sub_pd(ix1,jx0);
1776 dy10 = _mm_sub_pd(iy1,jy0);
1777 dz10 = _mm_sub_pd(iz1,jz0);
1778 dx11 = _mm_sub_pd(ix1,jx1);
1779 dy11 = _mm_sub_pd(iy1,jy1);
1780 dz11 = _mm_sub_pd(iz1,jz1);
1781 dx12 = _mm_sub_pd(ix1,jx2);
1782 dy12 = _mm_sub_pd(iy1,jy2);
1783 dz12 = _mm_sub_pd(iz1,jz2);
1784 dx20 = _mm_sub_pd(ix2,jx0);
1785 dy20 = _mm_sub_pd(iy2,jy0);
1786 dz20 = _mm_sub_pd(iz2,jz0);
1787 dx21 = _mm_sub_pd(ix2,jx1);
1788 dy21 = _mm_sub_pd(iy2,jy1);
1789 dz21 = _mm_sub_pd(iz2,jz1);
1790 dx22 = _mm_sub_pd(ix2,jx2);
1791 dy22 = _mm_sub_pd(iy2,jy2);
1792 dz22 = _mm_sub_pd(iz2,jz2);
1794 /* Calculate squared distance and things based on it */
1795 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
1796 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
1797 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
1798 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
1799 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
1800 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
1801 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
1802 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
1803 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
1805 rinv00 = sse41_invsqrt_d(rsq00);
1806 rinv01 = sse41_invsqrt_d(rsq01);
1807 rinv02 = sse41_invsqrt_d(rsq02);
1808 rinv10 = sse41_invsqrt_d(rsq10);
1809 rinv11 = sse41_invsqrt_d(rsq11);
1810 rinv12 = sse41_invsqrt_d(rsq12);
1811 rinv20 = sse41_invsqrt_d(rsq20);
1812 rinv21 = sse41_invsqrt_d(rsq21);
1813 rinv22 = sse41_invsqrt_d(rsq22);
1815 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
1816 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
1817 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
1818 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
1819 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
1820 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
1821 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
1822 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
1823 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
1825 fjx0 = _mm_setzero_pd();
1826 fjy0 = _mm_setzero_pd();
1827 fjz0 = _mm_setzero_pd();
1828 fjx1 = _mm_setzero_pd();
1829 fjy1 = _mm_setzero_pd();
1830 fjz1 = _mm_setzero_pd();
1831 fjx2 = _mm_setzero_pd();
1832 fjy2 = _mm_setzero_pd();
1833 fjz2 = _mm_setzero_pd();
1835 /**************************
1836 * CALCULATE INTERACTIONS *
1837 **************************/
1839 r00 = _mm_mul_pd(rsq00,rinv00);
1841 /* EWALD ELECTROSTATICS */
1843 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1844 ewrt = _mm_mul_pd(r00,ewtabscale);
1845 ewitab = _mm_cvttpd_epi32(ewrt);
1846 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1847 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
1848 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1849 felec = _mm_mul_pd(_mm_mul_pd(qq00,rinv00),_mm_sub_pd(rinvsq00,felec));
1851 /* LENNARD-JONES DISPERSION/REPULSION */
1853 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
1854 fvdw = _mm_mul_pd(_mm_sub_pd(_mm_mul_pd(c12_00,rinvsix),c6_00),_mm_mul_pd(rinvsix,rinvsq00));
1856 fscal = _mm_add_pd(felec,fvdw);
1858 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1860 /* Calculate temporary vectorial force */
1861 tx = _mm_mul_pd(fscal,dx00);
1862 ty = _mm_mul_pd(fscal,dy00);
1863 tz = _mm_mul_pd(fscal,dz00);
1865 /* Update vectorial force */
1866 fix0 = _mm_add_pd(fix0,tx);
1867 fiy0 = _mm_add_pd(fiy0,ty);
1868 fiz0 = _mm_add_pd(fiz0,tz);
1870 fjx0 = _mm_add_pd(fjx0,tx);
1871 fjy0 = _mm_add_pd(fjy0,ty);
1872 fjz0 = _mm_add_pd(fjz0,tz);
1874 /**************************
1875 * CALCULATE INTERACTIONS *
1876 **************************/
1878 r01 = _mm_mul_pd(rsq01,rinv01);
1880 /* EWALD ELECTROSTATICS */
1882 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1883 ewrt = _mm_mul_pd(r01,ewtabscale);
1884 ewitab = _mm_cvttpd_epi32(ewrt);
1885 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1886 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
1887 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1888 felec = _mm_mul_pd(_mm_mul_pd(qq01,rinv01),_mm_sub_pd(rinvsq01,felec));
1892 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1894 /* Calculate temporary vectorial force */
1895 tx = _mm_mul_pd(fscal,dx01);
1896 ty = _mm_mul_pd(fscal,dy01);
1897 tz = _mm_mul_pd(fscal,dz01);
1899 /* Update vectorial force */
1900 fix0 = _mm_add_pd(fix0,tx);
1901 fiy0 = _mm_add_pd(fiy0,ty);
1902 fiz0 = _mm_add_pd(fiz0,tz);
1904 fjx1 = _mm_add_pd(fjx1,tx);
1905 fjy1 = _mm_add_pd(fjy1,ty);
1906 fjz1 = _mm_add_pd(fjz1,tz);
1908 /**************************
1909 * CALCULATE INTERACTIONS *
1910 **************************/
1912 r02 = _mm_mul_pd(rsq02,rinv02);
1914 /* EWALD ELECTROSTATICS */
1916 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1917 ewrt = _mm_mul_pd(r02,ewtabscale);
1918 ewitab = _mm_cvttpd_epi32(ewrt);
1919 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1920 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
1921 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1922 felec = _mm_mul_pd(_mm_mul_pd(qq02,rinv02),_mm_sub_pd(rinvsq02,felec));
1926 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1928 /* Calculate temporary vectorial force */
1929 tx = _mm_mul_pd(fscal,dx02);
1930 ty = _mm_mul_pd(fscal,dy02);
1931 tz = _mm_mul_pd(fscal,dz02);
1933 /* Update vectorial force */
1934 fix0 = _mm_add_pd(fix0,tx);
1935 fiy0 = _mm_add_pd(fiy0,ty);
1936 fiz0 = _mm_add_pd(fiz0,tz);
1938 fjx2 = _mm_add_pd(fjx2,tx);
1939 fjy2 = _mm_add_pd(fjy2,ty);
1940 fjz2 = _mm_add_pd(fjz2,tz);
1942 /**************************
1943 * CALCULATE INTERACTIONS *
1944 **************************/
1946 r10 = _mm_mul_pd(rsq10,rinv10);
1948 /* EWALD ELECTROSTATICS */
1950 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1951 ewrt = _mm_mul_pd(r10,ewtabscale);
1952 ewitab = _mm_cvttpd_epi32(ewrt);
1953 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1954 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
1955 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1956 felec = _mm_mul_pd(_mm_mul_pd(qq10,rinv10),_mm_sub_pd(rinvsq10,felec));
1960 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1962 /* Calculate temporary vectorial force */
1963 tx = _mm_mul_pd(fscal,dx10);
1964 ty = _mm_mul_pd(fscal,dy10);
1965 tz = _mm_mul_pd(fscal,dz10);
1967 /* Update vectorial force */
1968 fix1 = _mm_add_pd(fix1,tx);
1969 fiy1 = _mm_add_pd(fiy1,ty);
1970 fiz1 = _mm_add_pd(fiz1,tz);
1972 fjx0 = _mm_add_pd(fjx0,tx);
1973 fjy0 = _mm_add_pd(fjy0,ty);
1974 fjz0 = _mm_add_pd(fjz0,tz);
1976 /**************************
1977 * CALCULATE INTERACTIONS *
1978 **************************/
1980 r11 = _mm_mul_pd(rsq11,rinv11);
1982 /* EWALD ELECTROSTATICS */
1984 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1985 ewrt = _mm_mul_pd(r11,ewtabscale);
1986 ewitab = _mm_cvttpd_epi32(ewrt);
1987 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1988 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
1989 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
1990 felec = _mm_mul_pd(_mm_mul_pd(qq11,rinv11),_mm_sub_pd(rinvsq11,felec));
1994 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1996 /* Calculate temporary vectorial force */
1997 tx = _mm_mul_pd(fscal,dx11);
1998 ty = _mm_mul_pd(fscal,dy11);
1999 tz = _mm_mul_pd(fscal,dz11);
2001 /* Update vectorial force */
2002 fix1 = _mm_add_pd(fix1,tx);
2003 fiy1 = _mm_add_pd(fiy1,ty);
2004 fiz1 = _mm_add_pd(fiz1,tz);
2006 fjx1 = _mm_add_pd(fjx1,tx);
2007 fjy1 = _mm_add_pd(fjy1,ty);
2008 fjz1 = _mm_add_pd(fjz1,tz);
2010 /**************************
2011 * CALCULATE INTERACTIONS *
2012 **************************/
2014 r12 = _mm_mul_pd(rsq12,rinv12);
2016 /* EWALD ELECTROSTATICS */
2018 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2019 ewrt = _mm_mul_pd(r12,ewtabscale);
2020 ewitab = _mm_cvttpd_epi32(ewrt);
2021 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
2022 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
2023 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
2024 felec = _mm_mul_pd(_mm_mul_pd(qq12,rinv12),_mm_sub_pd(rinvsq12,felec));
2028 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
2030 /* Calculate temporary vectorial force */
2031 tx = _mm_mul_pd(fscal,dx12);
2032 ty = _mm_mul_pd(fscal,dy12);
2033 tz = _mm_mul_pd(fscal,dz12);
2035 /* Update vectorial force */
2036 fix1 = _mm_add_pd(fix1,tx);
2037 fiy1 = _mm_add_pd(fiy1,ty);
2038 fiz1 = _mm_add_pd(fiz1,tz);
2040 fjx2 = _mm_add_pd(fjx2,tx);
2041 fjy2 = _mm_add_pd(fjy2,ty);
2042 fjz2 = _mm_add_pd(fjz2,tz);
2044 /**************************
2045 * CALCULATE INTERACTIONS *
2046 **************************/
2048 r20 = _mm_mul_pd(rsq20,rinv20);
2050 /* EWALD ELECTROSTATICS */
2052 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2053 ewrt = _mm_mul_pd(r20,ewtabscale);
2054 ewitab = _mm_cvttpd_epi32(ewrt);
2055 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
2056 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
2057 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
2058 felec = _mm_mul_pd(_mm_mul_pd(qq20,rinv20),_mm_sub_pd(rinvsq20,felec));
2062 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
2064 /* Calculate temporary vectorial force */
2065 tx = _mm_mul_pd(fscal,dx20);
2066 ty = _mm_mul_pd(fscal,dy20);
2067 tz = _mm_mul_pd(fscal,dz20);
2069 /* Update vectorial force */
2070 fix2 = _mm_add_pd(fix2,tx);
2071 fiy2 = _mm_add_pd(fiy2,ty);
2072 fiz2 = _mm_add_pd(fiz2,tz);
2074 fjx0 = _mm_add_pd(fjx0,tx);
2075 fjy0 = _mm_add_pd(fjy0,ty);
2076 fjz0 = _mm_add_pd(fjz0,tz);
2078 /**************************
2079 * CALCULATE INTERACTIONS *
2080 **************************/
2082 r21 = _mm_mul_pd(rsq21,rinv21);
2084 /* EWALD ELECTROSTATICS */
2086 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2087 ewrt = _mm_mul_pd(r21,ewtabscale);
2088 ewitab = _mm_cvttpd_epi32(ewrt);
2089 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
2090 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
2091 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
2092 felec = _mm_mul_pd(_mm_mul_pd(qq21,rinv21),_mm_sub_pd(rinvsq21,felec));
2096 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
2098 /* Calculate temporary vectorial force */
2099 tx = _mm_mul_pd(fscal,dx21);
2100 ty = _mm_mul_pd(fscal,dy21);
2101 tz = _mm_mul_pd(fscal,dz21);
2103 /* Update vectorial force */
2104 fix2 = _mm_add_pd(fix2,tx);
2105 fiy2 = _mm_add_pd(fiy2,ty);
2106 fiz2 = _mm_add_pd(fiz2,tz);
2108 fjx1 = _mm_add_pd(fjx1,tx);
2109 fjy1 = _mm_add_pd(fjy1,ty);
2110 fjz1 = _mm_add_pd(fjz1,tz);
2112 /**************************
2113 * CALCULATE INTERACTIONS *
2114 **************************/
2116 r22 = _mm_mul_pd(rsq22,rinv22);
2118 /* EWALD ELECTROSTATICS */
2120 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2121 ewrt = _mm_mul_pd(r22,ewtabscale);
2122 ewitab = _mm_cvttpd_epi32(ewrt);
2123 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
2124 gmx_mm_load_1pair_swizzle_pd(ewtab+gmx_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
2125 felec = _mm_add_pd(_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF),_mm_mul_pd(eweps,ewtabFn));
2126 felec = _mm_mul_pd(_mm_mul_pd(qq22,rinv22),_mm_sub_pd(rinvsq22,felec));
2130 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
2132 /* Calculate temporary vectorial force */
2133 tx = _mm_mul_pd(fscal,dx22);
2134 ty = _mm_mul_pd(fscal,dy22);
2135 tz = _mm_mul_pd(fscal,dz22);
2137 /* Update vectorial force */
2138 fix2 = _mm_add_pd(fix2,tx);
2139 fiy2 = _mm_add_pd(fiy2,ty);
2140 fiz2 = _mm_add_pd(fiz2,tz);
2142 fjx2 = _mm_add_pd(fjx2,tx);
2143 fjy2 = _mm_add_pd(fjy2,ty);
2144 fjz2 = _mm_add_pd(fjz2,tz);
2146 gmx_mm_decrement_3rvec_1ptr_swizzle_pd(f+j_coord_offsetA,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
2148 /* Inner loop uses 331 flops */
2151 /* End of innermost loop */
2153 gmx_mm_update_iforce_3atom_swizzle_pd(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
2154 f+i_coord_offset,fshift+i_shift_offset);
2156 /* Increment number of inner iterations */
2157 inneriter += j_index_end - j_index_start;
2159 /* Outer loop uses 18 flops */
2162 /* Increment number of outer iterations */
2165 /* Update outer/inner flops */
2167 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_F,outeriter*18 + inneriter*331);