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36 * Note: this file was generated by the GROMACS sse4_1_double kernel generator.
44 #include "../nb_kernel.h"
45 #include "gromacs/gmxlib/nrnb.h"
47 #include "kernelutil_x86_sse4_1_double.h"
50 * Gromacs nonbonded kernel: nb_kernel_ElecCoul_VdwNone_GeomW4W4_VF_sse4_1_double
51 * Electrostatics interaction: Coulomb
52 * VdW interaction: None
53 * Geometry: Water4-Water4
54 * Calculate force/pot: PotentialAndForce
57 nb_kernel_ElecCoul_VdwNone_GeomW4W4_VF_sse4_1_double
58 (t_nblist * gmx_restrict nlist,
59 rvec * gmx_restrict xx,
60 rvec * gmx_restrict ff,
61 struct t_forcerec * gmx_restrict fr,
62 t_mdatoms * gmx_restrict mdatoms,
63 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
64 t_nrnb * gmx_restrict nrnb)
66 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
67 * just 0 for non-waters.
68 * Suffixes A,B refer to j loop unrolling done with SSE double precision, e.g. for the two different
69 * jnr indices corresponding to data put in the four positions in the SIMD register.
71 int i_shift_offset,i_coord_offset,outeriter,inneriter;
72 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
74 int j_coord_offsetA,j_coord_offsetB;
75 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
77 real *shiftvec,*fshift,*x,*f;
78 __m128d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
80 __m128d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
82 __m128d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
84 __m128d ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
85 int vdwjidx1A,vdwjidx1B;
86 __m128d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
87 int vdwjidx2A,vdwjidx2B;
88 __m128d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
89 int vdwjidx3A,vdwjidx3B;
90 __m128d jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
91 __m128d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
92 __m128d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
93 __m128d dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
94 __m128d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
95 __m128d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
96 __m128d dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
97 __m128d dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
98 __m128d dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
99 __m128d dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
100 __m128d velec,felec,velecsum,facel,crf,krf,krf2;
102 __m128d dummy_mask,cutoff_mask;
103 __m128d signbit = gmx_mm_castsi128_pd( _mm_set_epi32(0x80000000,0x00000000,0x80000000,0x00000000) );
104 __m128d one = _mm_set1_pd(1.0);
105 __m128d two = _mm_set1_pd(2.0);
111 jindex = nlist->jindex;
113 shiftidx = nlist->shift;
115 shiftvec = fr->shift_vec[0];
116 fshift = fr->fshift[0];
117 facel = _mm_set1_pd(fr->ic->epsfac);
118 charge = mdatoms->chargeA;
120 /* Setup water-specific parameters */
121 inr = nlist->iinr[0];
122 iq1 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+1]));
123 iq2 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+2]));
124 iq3 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+3]));
126 jq1 = _mm_set1_pd(charge[inr+1]);
127 jq2 = _mm_set1_pd(charge[inr+2]);
128 jq3 = _mm_set1_pd(charge[inr+3]);
129 qq11 = _mm_mul_pd(iq1,jq1);
130 qq12 = _mm_mul_pd(iq1,jq2);
131 qq13 = _mm_mul_pd(iq1,jq3);
132 qq21 = _mm_mul_pd(iq2,jq1);
133 qq22 = _mm_mul_pd(iq2,jq2);
134 qq23 = _mm_mul_pd(iq2,jq3);
135 qq31 = _mm_mul_pd(iq3,jq1);
136 qq32 = _mm_mul_pd(iq3,jq2);
137 qq33 = _mm_mul_pd(iq3,jq3);
139 /* Avoid stupid compiler warnings */
147 /* Start outer loop over neighborlists */
148 for(iidx=0; iidx<nri; iidx++)
150 /* Load shift vector for this list */
151 i_shift_offset = DIM*shiftidx[iidx];
153 /* Load limits for loop over neighbors */
154 j_index_start = jindex[iidx];
155 j_index_end = jindex[iidx+1];
157 /* Get outer coordinate index */
159 i_coord_offset = DIM*inr;
161 /* Load i particle coords and add shift vector */
162 gmx_mm_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset+DIM,
163 &ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
165 fix1 = _mm_setzero_pd();
166 fiy1 = _mm_setzero_pd();
167 fiz1 = _mm_setzero_pd();
168 fix2 = _mm_setzero_pd();
169 fiy2 = _mm_setzero_pd();
170 fiz2 = _mm_setzero_pd();
171 fix3 = _mm_setzero_pd();
172 fiy3 = _mm_setzero_pd();
173 fiz3 = _mm_setzero_pd();
175 /* Reset potential sums */
176 velecsum = _mm_setzero_pd();
178 /* Start inner kernel loop */
179 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
182 /* Get j neighbor index, and coordinate index */
185 j_coord_offsetA = DIM*jnrA;
186 j_coord_offsetB = DIM*jnrB;
188 /* load j atom coordinates */
189 gmx_mm_load_3rvec_2ptr_swizzle_pd(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
190 &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
192 /* Calculate displacement vector */
193 dx11 = _mm_sub_pd(ix1,jx1);
194 dy11 = _mm_sub_pd(iy1,jy1);
195 dz11 = _mm_sub_pd(iz1,jz1);
196 dx12 = _mm_sub_pd(ix1,jx2);
197 dy12 = _mm_sub_pd(iy1,jy2);
198 dz12 = _mm_sub_pd(iz1,jz2);
199 dx13 = _mm_sub_pd(ix1,jx3);
200 dy13 = _mm_sub_pd(iy1,jy3);
201 dz13 = _mm_sub_pd(iz1,jz3);
202 dx21 = _mm_sub_pd(ix2,jx1);
203 dy21 = _mm_sub_pd(iy2,jy1);
204 dz21 = _mm_sub_pd(iz2,jz1);
205 dx22 = _mm_sub_pd(ix2,jx2);
206 dy22 = _mm_sub_pd(iy2,jy2);
207 dz22 = _mm_sub_pd(iz2,jz2);
208 dx23 = _mm_sub_pd(ix2,jx3);
209 dy23 = _mm_sub_pd(iy2,jy3);
210 dz23 = _mm_sub_pd(iz2,jz3);
211 dx31 = _mm_sub_pd(ix3,jx1);
212 dy31 = _mm_sub_pd(iy3,jy1);
213 dz31 = _mm_sub_pd(iz3,jz1);
214 dx32 = _mm_sub_pd(ix3,jx2);
215 dy32 = _mm_sub_pd(iy3,jy2);
216 dz32 = _mm_sub_pd(iz3,jz2);
217 dx33 = _mm_sub_pd(ix3,jx3);
218 dy33 = _mm_sub_pd(iy3,jy3);
219 dz33 = _mm_sub_pd(iz3,jz3);
221 /* Calculate squared distance and things based on it */
222 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
223 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
224 rsq13 = gmx_mm_calc_rsq_pd(dx13,dy13,dz13);
225 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
226 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
227 rsq23 = gmx_mm_calc_rsq_pd(dx23,dy23,dz23);
228 rsq31 = gmx_mm_calc_rsq_pd(dx31,dy31,dz31);
229 rsq32 = gmx_mm_calc_rsq_pd(dx32,dy32,dz32);
230 rsq33 = gmx_mm_calc_rsq_pd(dx33,dy33,dz33);
232 rinv11 = sse41_invsqrt_d(rsq11);
233 rinv12 = sse41_invsqrt_d(rsq12);
234 rinv13 = sse41_invsqrt_d(rsq13);
235 rinv21 = sse41_invsqrt_d(rsq21);
236 rinv22 = sse41_invsqrt_d(rsq22);
237 rinv23 = sse41_invsqrt_d(rsq23);
238 rinv31 = sse41_invsqrt_d(rsq31);
239 rinv32 = sse41_invsqrt_d(rsq32);
240 rinv33 = sse41_invsqrt_d(rsq33);
242 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
243 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
244 rinvsq13 = _mm_mul_pd(rinv13,rinv13);
245 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
246 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
247 rinvsq23 = _mm_mul_pd(rinv23,rinv23);
248 rinvsq31 = _mm_mul_pd(rinv31,rinv31);
249 rinvsq32 = _mm_mul_pd(rinv32,rinv32);
250 rinvsq33 = _mm_mul_pd(rinv33,rinv33);
252 fjx1 = _mm_setzero_pd();
253 fjy1 = _mm_setzero_pd();
254 fjz1 = _mm_setzero_pd();
255 fjx2 = _mm_setzero_pd();
256 fjy2 = _mm_setzero_pd();
257 fjz2 = _mm_setzero_pd();
258 fjx3 = _mm_setzero_pd();
259 fjy3 = _mm_setzero_pd();
260 fjz3 = _mm_setzero_pd();
262 /**************************
263 * CALCULATE INTERACTIONS *
264 **************************/
266 /* COULOMB ELECTROSTATICS */
267 velec = _mm_mul_pd(qq11,rinv11);
268 felec = _mm_mul_pd(velec,rinvsq11);
270 /* Update potential sum for this i atom from the interaction with this j atom. */
271 velecsum = _mm_add_pd(velecsum,velec);
275 /* Calculate temporary vectorial force */
276 tx = _mm_mul_pd(fscal,dx11);
277 ty = _mm_mul_pd(fscal,dy11);
278 tz = _mm_mul_pd(fscal,dz11);
280 /* Update vectorial force */
281 fix1 = _mm_add_pd(fix1,tx);
282 fiy1 = _mm_add_pd(fiy1,ty);
283 fiz1 = _mm_add_pd(fiz1,tz);
285 fjx1 = _mm_add_pd(fjx1,tx);
286 fjy1 = _mm_add_pd(fjy1,ty);
287 fjz1 = _mm_add_pd(fjz1,tz);
289 /**************************
290 * CALCULATE INTERACTIONS *
291 **************************/
293 /* COULOMB ELECTROSTATICS */
294 velec = _mm_mul_pd(qq12,rinv12);
295 felec = _mm_mul_pd(velec,rinvsq12);
297 /* Update potential sum for this i atom from the interaction with this j atom. */
298 velecsum = _mm_add_pd(velecsum,velec);
302 /* Calculate temporary vectorial force */
303 tx = _mm_mul_pd(fscal,dx12);
304 ty = _mm_mul_pd(fscal,dy12);
305 tz = _mm_mul_pd(fscal,dz12);
307 /* Update vectorial force */
308 fix1 = _mm_add_pd(fix1,tx);
309 fiy1 = _mm_add_pd(fiy1,ty);
310 fiz1 = _mm_add_pd(fiz1,tz);
312 fjx2 = _mm_add_pd(fjx2,tx);
313 fjy2 = _mm_add_pd(fjy2,ty);
314 fjz2 = _mm_add_pd(fjz2,tz);
316 /**************************
317 * CALCULATE INTERACTIONS *
318 **************************/
320 /* COULOMB ELECTROSTATICS */
321 velec = _mm_mul_pd(qq13,rinv13);
322 felec = _mm_mul_pd(velec,rinvsq13);
324 /* Update potential sum for this i atom from the interaction with this j atom. */
325 velecsum = _mm_add_pd(velecsum,velec);
329 /* Calculate temporary vectorial force */
330 tx = _mm_mul_pd(fscal,dx13);
331 ty = _mm_mul_pd(fscal,dy13);
332 tz = _mm_mul_pd(fscal,dz13);
334 /* Update vectorial force */
335 fix1 = _mm_add_pd(fix1,tx);
336 fiy1 = _mm_add_pd(fiy1,ty);
337 fiz1 = _mm_add_pd(fiz1,tz);
339 fjx3 = _mm_add_pd(fjx3,tx);
340 fjy3 = _mm_add_pd(fjy3,ty);
341 fjz3 = _mm_add_pd(fjz3,tz);
343 /**************************
344 * CALCULATE INTERACTIONS *
345 **************************/
347 /* COULOMB ELECTROSTATICS */
348 velec = _mm_mul_pd(qq21,rinv21);
349 felec = _mm_mul_pd(velec,rinvsq21);
351 /* Update potential sum for this i atom from the interaction with this j atom. */
352 velecsum = _mm_add_pd(velecsum,velec);
356 /* Calculate temporary vectorial force */
357 tx = _mm_mul_pd(fscal,dx21);
358 ty = _mm_mul_pd(fscal,dy21);
359 tz = _mm_mul_pd(fscal,dz21);
361 /* Update vectorial force */
362 fix2 = _mm_add_pd(fix2,tx);
363 fiy2 = _mm_add_pd(fiy2,ty);
364 fiz2 = _mm_add_pd(fiz2,tz);
366 fjx1 = _mm_add_pd(fjx1,tx);
367 fjy1 = _mm_add_pd(fjy1,ty);
368 fjz1 = _mm_add_pd(fjz1,tz);
370 /**************************
371 * CALCULATE INTERACTIONS *
372 **************************/
374 /* COULOMB ELECTROSTATICS */
375 velec = _mm_mul_pd(qq22,rinv22);
376 felec = _mm_mul_pd(velec,rinvsq22);
378 /* Update potential sum for this i atom from the interaction with this j atom. */
379 velecsum = _mm_add_pd(velecsum,velec);
383 /* Calculate temporary vectorial force */
384 tx = _mm_mul_pd(fscal,dx22);
385 ty = _mm_mul_pd(fscal,dy22);
386 tz = _mm_mul_pd(fscal,dz22);
388 /* Update vectorial force */
389 fix2 = _mm_add_pd(fix2,tx);
390 fiy2 = _mm_add_pd(fiy2,ty);
391 fiz2 = _mm_add_pd(fiz2,tz);
393 fjx2 = _mm_add_pd(fjx2,tx);
394 fjy2 = _mm_add_pd(fjy2,ty);
395 fjz2 = _mm_add_pd(fjz2,tz);
397 /**************************
398 * CALCULATE INTERACTIONS *
399 **************************/
401 /* COULOMB ELECTROSTATICS */
402 velec = _mm_mul_pd(qq23,rinv23);
403 felec = _mm_mul_pd(velec,rinvsq23);
405 /* Update potential sum for this i atom from the interaction with this j atom. */
406 velecsum = _mm_add_pd(velecsum,velec);
410 /* Calculate temporary vectorial force */
411 tx = _mm_mul_pd(fscal,dx23);
412 ty = _mm_mul_pd(fscal,dy23);
413 tz = _mm_mul_pd(fscal,dz23);
415 /* Update vectorial force */
416 fix2 = _mm_add_pd(fix2,tx);
417 fiy2 = _mm_add_pd(fiy2,ty);
418 fiz2 = _mm_add_pd(fiz2,tz);
420 fjx3 = _mm_add_pd(fjx3,tx);
421 fjy3 = _mm_add_pd(fjy3,ty);
422 fjz3 = _mm_add_pd(fjz3,tz);
424 /**************************
425 * CALCULATE INTERACTIONS *
426 **************************/
428 /* COULOMB ELECTROSTATICS */
429 velec = _mm_mul_pd(qq31,rinv31);
430 felec = _mm_mul_pd(velec,rinvsq31);
432 /* Update potential sum for this i atom from the interaction with this j atom. */
433 velecsum = _mm_add_pd(velecsum,velec);
437 /* Calculate temporary vectorial force */
438 tx = _mm_mul_pd(fscal,dx31);
439 ty = _mm_mul_pd(fscal,dy31);
440 tz = _mm_mul_pd(fscal,dz31);
442 /* Update vectorial force */
443 fix3 = _mm_add_pd(fix3,tx);
444 fiy3 = _mm_add_pd(fiy3,ty);
445 fiz3 = _mm_add_pd(fiz3,tz);
447 fjx1 = _mm_add_pd(fjx1,tx);
448 fjy1 = _mm_add_pd(fjy1,ty);
449 fjz1 = _mm_add_pd(fjz1,tz);
451 /**************************
452 * CALCULATE INTERACTIONS *
453 **************************/
455 /* COULOMB ELECTROSTATICS */
456 velec = _mm_mul_pd(qq32,rinv32);
457 felec = _mm_mul_pd(velec,rinvsq32);
459 /* Update potential sum for this i atom from the interaction with this j atom. */
460 velecsum = _mm_add_pd(velecsum,velec);
464 /* Calculate temporary vectorial force */
465 tx = _mm_mul_pd(fscal,dx32);
466 ty = _mm_mul_pd(fscal,dy32);
467 tz = _mm_mul_pd(fscal,dz32);
469 /* Update vectorial force */
470 fix3 = _mm_add_pd(fix3,tx);
471 fiy3 = _mm_add_pd(fiy3,ty);
472 fiz3 = _mm_add_pd(fiz3,tz);
474 fjx2 = _mm_add_pd(fjx2,tx);
475 fjy2 = _mm_add_pd(fjy2,ty);
476 fjz2 = _mm_add_pd(fjz2,tz);
478 /**************************
479 * CALCULATE INTERACTIONS *
480 **************************/
482 /* COULOMB ELECTROSTATICS */
483 velec = _mm_mul_pd(qq33,rinv33);
484 felec = _mm_mul_pd(velec,rinvsq33);
486 /* Update potential sum for this i atom from the interaction with this j atom. */
487 velecsum = _mm_add_pd(velecsum,velec);
491 /* Calculate temporary vectorial force */
492 tx = _mm_mul_pd(fscal,dx33);
493 ty = _mm_mul_pd(fscal,dy33);
494 tz = _mm_mul_pd(fscal,dz33);
496 /* Update vectorial force */
497 fix3 = _mm_add_pd(fix3,tx);
498 fiy3 = _mm_add_pd(fiy3,ty);
499 fiz3 = _mm_add_pd(fiz3,tz);
501 fjx3 = _mm_add_pd(fjx3,tx);
502 fjy3 = _mm_add_pd(fjy3,ty);
503 fjz3 = _mm_add_pd(fjz3,tz);
505 gmx_mm_decrement_3rvec_2ptr_swizzle_pd(f+j_coord_offsetA+DIM,f+j_coord_offsetB+DIM,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
507 /* Inner loop uses 252 flops */
514 j_coord_offsetA = DIM*jnrA;
516 /* load j atom coordinates */
517 gmx_mm_load_3rvec_1ptr_swizzle_pd(x+j_coord_offsetA+DIM,
518 &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
520 /* Calculate displacement vector */
521 dx11 = _mm_sub_pd(ix1,jx1);
522 dy11 = _mm_sub_pd(iy1,jy1);
523 dz11 = _mm_sub_pd(iz1,jz1);
524 dx12 = _mm_sub_pd(ix1,jx2);
525 dy12 = _mm_sub_pd(iy1,jy2);
526 dz12 = _mm_sub_pd(iz1,jz2);
527 dx13 = _mm_sub_pd(ix1,jx3);
528 dy13 = _mm_sub_pd(iy1,jy3);
529 dz13 = _mm_sub_pd(iz1,jz3);
530 dx21 = _mm_sub_pd(ix2,jx1);
531 dy21 = _mm_sub_pd(iy2,jy1);
532 dz21 = _mm_sub_pd(iz2,jz1);
533 dx22 = _mm_sub_pd(ix2,jx2);
534 dy22 = _mm_sub_pd(iy2,jy2);
535 dz22 = _mm_sub_pd(iz2,jz2);
536 dx23 = _mm_sub_pd(ix2,jx3);
537 dy23 = _mm_sub_pd(iy2,jy3);
538 dz23 = _mm_sub_pd(iz2,jz3);
539 dx31 = _mm_sub_pd(ix3,jx1);
540 dy31 = _mm_sub_pd(iy3,jy1);
541 dz31 = _mm_sub_pd(iz3,jz1);
542 dx32 = _mm_sub_pd(ix3,jx2);
543 dy32 = _mm_sub_pd(iy3,jy2);
544 dz32 = _mm_sub_pd(iz3,jz2);
545 dx33 = _mm_sub_pd(ix3,jx3);
546 dy33 = _mm_sub_pd(iy3,jy3);
547 dz33 = _mm_sub_pd(iz3,jz3);
549 /* Calculate squared distance and things based on it */
550 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
551 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
552 rsq13 = gmx_mm_calc_rsq_pd(dx13,dy13,dz13);
553 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
554 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
555 rsq23 = gmx_mm_calc_rsq_pd(dx23,dy23,dz23);
556 rsq31 = gmx_mm_calc_rsq_pd(dx31,dy31,dz31);
557 rsq32 = gmx_mm_calc_rsq_pd(dx32,dy32,dz32);
558 rsq33 = gmx_mm_calc_rsq_pd(dx33,dy33,dz33);
560 rinv11 = sse41_invsqrt_d(rsq11);
561 rinv12 = sse41_invsqrt_d(rsq12);
562 rinv13 = sse41_invsqrt_d(rsq13);
563 rinv21 = sse41_invsqrt_d(rsq21);
564 rinv22 = sse41_invsqrt_d(rsq22);
565 rinv23 = sse41_invsqrt_d(rsq23);
566 rinv31 = sse41_invsqrt_d(rsq31);
567 rinv32 = sse41_invsqrt_d(rsq32);
568 rinv33 = sse41_invsqrt_d(rsq33);
570 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
571 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
572 rinvsq13 = _mm_mul_pd(rinv13,rinv13);
573 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
574 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
575 rinvsq23 = _mm_mul_pd(rinv23,rinv23);
576 rinvsq31 = _mm_mul_pd(rinv31,rinv31);
577 rinvsq32 = _mm_mul_pd(rinv32,rinv32);
578 rinvsq33 = _mm_mul_pd(rinv33,rinv33);
580 fjx1 = _mm_setzero_pd();
581 fjy1 = _mm_setzero_pd();
582 fjz1 = _mm_setzero_pd();
583 fjx2 = _mm_setzero_pd();
584 fjy2 = _mm_setzero_pd();
585 fjz2 = _mm_setzero_pd();
586 fjx3 = _mm_setzero_pd();
587 fjy3 = _mm_setzero_pd();
588 fjz3 = _mm_setzero_pd();
590 /**************************
591 * CALCULATE INTERACTIONS *
592 **************************/
594 /* COULOMB ELECTROSTATICS */
595 velec = _mm_mul_pd(qq11,rinv11);
596 felec = _mm_mul_pd(velec,rinvsq11);
598 /* Update potential sum for this i atom from the interaction with this j atom. */
599 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
600 velecsum = _mm_add_pd(velecsum,velec);
604 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
606 /* Calculate temporary vectorial force */
607 tx = _mm_mul_pd(fscal,dx11);
608 ty = _mm_mul_pd(fscal,dy11);
609 tz = _mm_mul_pd(fscal,dz11);
611 /* Update vectorial force */
612 fix1 = _mm_add_pd(fix1,tx);
613 fiy1 = _mm_add_pd(fiy1,ty);
614 fiz1 = _mm_add_pd(fiz1,tz);
616 fjx1 = _mm_add_pd(fjx1,tx);
617 fjy1 = _mm_add_pd(fjy1,ty);
618 fjz1 = _mm_add_pd(fjz1,tz);
620 /**************************
621 * CALCULATE INTERACTIONS *
622 **************************/
624 /* COULOMB ELECTROSTATICS */
625 velec = _mm_mul_pd(qq12,rinv12);
626 felec = _mm_mul_pd(velec,rinvsq12);
628 /* Update potential sum for this i atom from the interaction with this j atom. */
629 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
630 velecsum = _mm_add_pd(velecsum,velec);
634 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
636 /* Calculate temporary vectorial force */
637 tx = _mm_mul_pd(fscal,dx12);
638 ty = _mm_mul_pd(fscal,dy12);
639 tz = _mm_mul_pd(fscal,dz12);
641 /* Update vectorial force */
642 fix1 = _mm_add_pd(fix1,tx);
643 fiy1 = _mm_add_pd(fiy1,ty);
644 fiz1 = _mm_add_pd(fiz1,tz);
646 fjx2 = _mm_add_pd(fjx2,tx);
647 fjy2 = _mm_add_pd(fjy2,ty);
648 fjz2 = _mm_add_pd(fjz2,tz);
650 /**************************
651 * CALCULATE INTERACTIONS *
652 **************************/
654 /* COULOMB ELECTROSTATICS */
655 velec = _mm_mul_pd(qq13,rinv13);
656 felec = _mm_mul_pd(velec,rinvsq13);
658 /* Update potential sum for this i atom from the interaction with this j atom. */
659 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
660 velecsum = _mm_add_pd(velecsum,velec);
664 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
666 /* Calculate temporary vectorial force */
667 tx = _mm_mul_pd(fscal,dx13);
668 ty = _mm_mul_pd(fscal,dy13);
669 tz = _mm_mul_pd(fscal,dz13);
671 /* Update vectorial force */
672 fix1 = _mm_add_pd(fix1,tx);
673 fiy1 = _mm_add_pd(fiy1,ty);
674 fiz1 = _mm_add_pd(fiz1,tz);
676 fjx3 = _mm_add_pd(fjx3,tx);
677 fjy3 = _mm_add_pd(fjy3,ty);
678 fjz3 = _mm_add_pd(fjz3,tz);
680 /**************************
681 * CALCULATE INTERACTIONS *
682 **************************/
684 /* COULOMB ELECTROSTATICS */
685 velec = _mm_mul_pd(qq21,rinv21);
686 felec = _mm_mul_pd(velec,rinvsq21);
688 /* Update potential sum for this i atom from the interaction with this j atom. */
689 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
690 velecsum = _mm_add_pd(velecsum,velec);
694 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
696 /* Calculate temporary vectorial force */
697 tx = _mm_mul_pd(fscal,dx21);
698 ty = _mm_mul_pd(fscal,dy21);
699 tz = _mm_mul_pd(fscal,dz21);
701 /* Update vectorial force */
702 fix2 = _mm_add_pd(fix2,tx);
703 fiy2 = _mm_add_pd(fiy2,ty);
704 fiz2 = _mm_add_pd(fiz2,tz);
706 fjx1 = _mm_add_pd(fjx1,tx);
707 fjy1 = _mm_add_pd(fjy1,ty);
708 fjz1 = _mm_add_pd(fjz1,tz);
710 /**************************
711 * CALCULATE INTERACTIONS *
712 **************************/
714 /* COULOMB ELECTROSTATICS */
715 velec = _mm_mul_pd(qq22,rinv22);
716 felec = _mm_mul_pd(velec,rinvsq22);
718 /* Update potential sum for this i atom from the interaction with this j atom. */
719 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
720 velecsum = _mm_add_pd(velecsum,velec);
724 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
726 /* Calculate temporary vectorial force */
727 tx = _mm_mul_pd(fscal,dx22);
728 ty = _mm_mul_pd(fscal,dy22);
729 tz = _mm_mul_pd(fscal,dz22);
731 /* Update vectorial force */
732 fix2 = _mm_add_pd(fix2,tx);
733 fiy2 = _mm_add_pd(fiy2,ty);
734 fiz2 = _mm_add_pd(fiz2,tz);
736 fjx2 = _mm_add_pd(fjx2,tx);
737 fjy2 = _mm_add_pd(fjy2,ty);
738 fjz2 = _mm_add_pd(fjz2,tz);
740 /**************************
741 * CALCULATE INTERACTIONS *
742 **************************/
744 /* COULOMB ELECTROSTATICS */
745 velec = _mm_mul_pd(qq23,rinv23);
746 felec = _mm_mul_pd(velec,rinvsq23);
748 /* Update potential sum for this i atom from the interaction with this j atom. */
749 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
750 velecsum = _mm_add_pd(velecsum,velec);
754 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
756 /* Calculate temporary vectorial force */
757 tx = _mm_mul_pd(fscal,dx23);
758 ty = _mm_mul_pd(fscal,dy23);
759 tz = _mm_mul_pd(fscal,dz23);
761 /* Update vectorial force */
762 fix2 = _mm_add_pd(fix2,tx);
763 fiy2 = _mm_add_pd(fiy2,ty);
764 fiz2 = _mm_add_pd(fiz2,tz);
766 fjx3 = _mm_add_pd(fjx3,tx);
767 fjy3 = _mm_add_pd(fjy3,ty);
768 fjz3 = _mm_add_pd(fjz3,tz);
770 /**************************
771 * CALCULATE INTERACTIONS *
772 **************************/
774 /* COULOMB ELECTROSTATICS */
775 velec = _mm_mul_pd(qq31,rinv31);
776 felec = _mm_mul_pd(velec,rinvsq31);
778 /* Update potential sum for this i atom from the interaction with this j atom. */
779 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
780 velecsum = _mm_add_pd(velecsum,velec);
784 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
786 /* Calculate temporary vectorial force */
787 tx = _mm_mul_pd(fscal,dx31);
788 ty = _mm_mul_pd(fscal,dy31);
789 tz = _mm_mul_pd(fscal,dz31);
791 /* Update vectorial force */
792 fix3 = _mm_add_pd(fix3,tx);
793 fiy3 = _mm_add_pd(fiy3,ty);
794 fiz3 = _mm_add_pd(fiz3,tz);
796 fjx1 = _mm_add_pd(fjx1,tx);
797 fjy1 = _mm_add_pd(fjy1,ty);
798 fjz1 = _mm_add_pd(fjz1,tz);
800 /**************************
801 * CALCULATE INTERACTIONS *
802 **************************/
804 /* COULOMB ELECTROSTATICS */
805 velec = _mm_mul_pd(qq32,rinv32);
806 felec = _mm_mul_pd(velec,rinvsq32);
808 /* Update potential sum for this i atom from the interaction with this j atom. */
809 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
810 velecsum = _mm_add_pd(velecsum,velec);
814 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
816 /* Calculate temporary vectorial force */
817 tx = _mm_mul_pd(fscal,dx32);
818 ty = _mm_mul_pd(fscal,dy32);
819 tz = _mm_mul_pd(fscal,dz32);
821 /* Update vectorial force */
822 fix3 = _mm_add_pd(fix3,tx);
823 fiy3 = _mm_add_pd(fiy3,ty);
824 fiz3 = _mm_add_pd(fiz3,tz);
826 fjx2 = _mm_add_pd(fjx2,tx);
827 fjy2 = _mm_add_pd(fjy2,ty);
828 fjz2 = _mm_add_pd(fjz2,tz);
830 /**************************
831 * CALCULATE INTERACTIONS *
832 **************************/
834 /* COULOMB ELECTROSTATICS */
835 velec = _mm_mul_pd(qq33,rinv33);
836 felec = _mm_mul_pd(velec,rinvsq33);
838 /* Update potential sum for this i atom from the interaction with this j atom. */
839 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
840 velecsum = _mm_add_pd(velecsum,velec);
844 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
846 /* Calculate temporary vectorial force */
847 tx = _mm_mul_pd(fscal,dx33);
848 ty = _mm_mul_pd(fscal,dy33);
849 tz = _mm_mul_pd(fscal,dz33);
851 /* Update vectorial force */
852 fix3 = _mm_add_pd(fix3,tx);
853 fiy3 = _mm_add_pd(fiy3,ty);
854 fiz3 = _mm_add_pd(fiz3,tz);
856 fjx3 = _mm_add_pd(fjx3,tx);
857 fjy3 = _mm_add_pd(fjy3,ty);
858 fjz3 = _mm_add_pd(fjz3,tz);
860 gmx_mm_decrement_3rvec_1ptr_swizzle_pd(f+j_coord_offsetA+DIM,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
862 /* Inner loop uses 252 flops */
865 /* End of innermost loop */
867 gmx_mm_update_iforce_3atom_swizzle_pd(fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
868 f+i_coord_offset+DIM,fshift+i_shift_offset);
871 /* Update potential energies */
872 gmx_mm_update_1pot_pd(velecsum,kernel_data->energygrp_elec+ggid);
874 /* Increment number of inner iterations */
875 inneriter += j_index_end - j_index_start;
877 /* Outer loop uses 19 flops */
880 /* Increment number of outer iterations */
883 /* Update outer/inner flops */
885 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W4W4_VF,outeriter*19 + inneriter*252);
888 * Gromacs nonbonded kernel: nb_kernel_ElecCoul_VdwNone_GeomW4W4_F_sse4_1_double
889 * Electrostatics interaction: Coulomb
890 * VdW interaction: None
891 * Geometry: Water4-Water4
892 * Calculate force/pot: Force
895 nb_kernel_ElecCoul_VdwNone_GeomW4W4_F_sse4_1_double
896 (t_nblist * gmx_restrict nlist,
897 rvec * gmx_restrict xx,
898 rvec * gmx_restrict ff,
899 struct t_forcerec * gmx_restrict fr,
900 t_mdatoms * gmx_restrict mdatoms,
901 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
902 t_nrnb * gmx_restrict nrnb)
904 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
905 * just 0 for non-waters.
906 * Suffixes A,B refer to j loop unrolling done with SSE double precision, e.g. for the two different
907 * jnr indices corresponding to data put in the four positions in the SIMD register.
909 int i_shift_offset,i_coord_offset,outeriter,inneriter;
910 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
912 int j_coord_offsetA,j_coord_offsetB;
913 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
915 real *shiftvec,*fshift,*x,*f;
916 __m128d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
918 __m128d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
920 __m128d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
922 __m128d ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
923 int vdwjidx1A,vdwjidx1B;
924 __m128d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
925 int vdwjidx2A,vdwjidx2B;
926 __m128d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
927 int vdwjidx3A,vdwjidx3B;
928 __m128d jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
929 __m128d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
930 __m128d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
931 __m128d dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
932 __m128d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
933 __m128d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
934 __m128d dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
935 __m128d dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
936 __m128d dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
937 __m128d dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
938 __m128d velec,felec,velecsum,facel,crf,krf,krf2;
940 __m128d dummy_mask,cutoff_mask;
941 __m128d signbit = gmx_mm_castsi128_pd( _mm_set_epi32(0x80000000,0x00000000,0x80000000,0x00000000) );
942 __m128d one = _mm_set1_pd(1.0);
943 __m128d two = _mm_set1_pd(2.0);
949 jindex = nlist->jindex;
951 shiftidx = nlist->shift;
953 shiftvec = fr->shift_vec[0];
954 fshift = fr->fshift[0];
955 facel = _mm_set1_pd(fr->ic->epsfac);
956 charge = mdatoms->chargeA;
958 /* Setup water-specific parameters */
959 inr = nlist->iinr[0];
960 iq1 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+1]));
961 iq2 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+2]));
962 iq3 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+3]));
964 jq1 = _mm_set1_pd(charge[inr+1]);
965 jq2 = _mm_set1_pd(charge[inr+2]);
966 jq3 = _mm_set1_pd(charge[inr+3]);
967 qq11 = _mm_mul_pd(iq1,jq1);
968 qq12 = _mm_mul_pd(iq1,jq2);
969 qq13 = _mm_mul_pd(iq1,jq3);
970 qq21 = _mm_mul_pd(iq2,jq1);
971 qq22 = _mm_mul_pd(iq2,jq2);
972 qq23 = _mm_mul_pd(iq2,jq3);
973 qq31 = _mm_mul_pd(iq3,jq1);
974 qq32 = _mm_mul_pd(iq3,jq2);
975 qq33 = _mm_mul_pd(iq3,jq3);
977 /* Avoid stupid compiler warnings */
985 /* Start outer loop over neighborlists */
986 for(iidx=0; iidx<nri; iidx++)
988 /* Load shift vector for this list */
989 i_shift_offset = DIM*shiftidx[iidx];
991 /* Load limits for loop over neighbors */
992 j_index_start = jindex[iidx];
993 j_index_end = jindex[iidx+1];
995 /* Get outer coordinate index */
997 i_coord_offset = DIM*inr;
999 /* Load i particle coords and add shift vector */
1000 gmx_mm_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset+DIM,
1001 &ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
1003 fix1 = _mm_setzero_pd();
1004 fiy1 = _mm_setzero_pd();
1005 fiz1 = _mm_setzero_pd();
1006 fix2 = _mm_setzero_pd();
1007 fiy2 = _mm_setzero_pd();
1008 fiz2 = _mm_setzero_pd();
1009 fix3 = _mm_setzero_pd();
1010 fiy3 = _mm_setzero_pd();
1011 fiz3 = _mm_setzero_pd();
1013 /* Start inner kernel loop */
1014 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
1017 /* Get j neighbor index, and coordinate index */
1019 jnrB = jjnr[jidx+1];
1020 j_coord_offsetA = DIM*jnrA;
1021 j_coord_offsetB = DIM*jnrB;
1023 /* load j atom coordinates */
1024 gmx_mm_load_3rvec_2ptr_swizzle_pd(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
1025 &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
1027 /* Calculate displacement vector */
1028 dx11 = _mm_sub_pd(ix1,jx1);
1029 dy11 = _mm_sub_pd(iy1,jy1);
1030 dz11 = _mm_sub_pd(iz1,jz1);
1031 dx12 = _mm_sub_pd(ix1,jx2);
1032 dy12 = _mm_sub_pd(iy1,jy2);
1033 dz12 = _mm_sub_pd(iz1,jz2);
1034 dx13 = _mm_sub_pd(ix1,jx3);
1035 dy13 = _mm_sub_pd(iy1,jy3);
1036 dz13 = _mm_sub_pd(iz1,jz3);
1037 dx21 = _mm_sub_pd(ix2,jx1);
1038 dy21 = _mm_sub_pd(iy2,jy1);
1039 dz21 = _mm_sub_pd(iz2,jz1);
1040 dx22 = _mm_sub_pd(ix2,jx2);
1041 dy22 = _mm_sub_pd(iy2,jy2);
1042 dz22 = _mm_sub_pd(iz2,jz2);
1043 dx23 = _mm_sub_pd(ix2,jx3);
1044 dy23 = _mm_sub_pd(iy2,jy3);
1045 dz23 = _mm_sub_pd(iz2,jz3);
1046 dx31 = _mm_sub_pd(ix3,jx1);
1047 dy31 = _mm_sub_pd(iy3,jy1);
1048 dz31 = _mm_sub_pd(iz3,jz1);
1049 dx32 = _mm_sub_pd(ix3,jx2);
1050 dy32 = _mm_sub_pd(iy3,jy2);
1051 dz32 = _mm_sub_pd(iz3,jz2);
1052 dx33 = _mm_sub_pd(ix3,jx3);
1053 dy33 = _mm_sub_pd(iy3,jy3);
1054 dz33 = _mm_sub_pd(iz3,jz3);
1056 /* Calculate squared distance and things based on it */
1057 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
1058 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
1059 rsq13 = gmx_mm_calc_rsq_pd(dx13,dy13,dz13);
1060 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
1061 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
1062 rsq23 = gmx_mm_calc_rsq_pd(dx23,dy23,dz23);
1063 rsq31 = gmx_mm_calc_rsq_pd(dx31,dy31,dz31);
1064 rsq32 = gmx_mm_calc_rsq_pd(dx32,dy32,dz32);
1065 rsq33 = gmx_mm_calc_rsq_pd(dx33,dy33,dz33);
1067 rinv11 = sse41_invsqrt_d(rsq11);
1068 rinv12 = sse41_invsqrt_d(rsq12);
1069 rinv13 = sse41_invsqrt_d(rsq13);
1070 rinv21 = sse41_invsqrt_d(rsq21);
1071 rinv22 = sse41_invsqrt_d(rsq22);
1072 rinv23 = sse41_invsqrt_d(rsq23);
1073 rinv31 = sse41_invsqrt_d(rsq31);
1074 rinv32 = sse41_invsqrt_d(rsq32);
1075 rinv33 = sse41_invsqrt_d(rsq33);
1077 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
1078 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
1079 rinvsq13 = _mm_mul_pd(rinv13,rinv13);
1080 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
1081 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
1082 rinvsq23 = _mm_mul_pd(rinv23,rinv23);
1083 rinvsq31 = _mm_mul_pd(rinv31,rinv31);
1084 rinvsq32 = _mm_mul_pd(rinv32,rinv32);
1085 rinvsq33 = _mm_mul_pd(rinv33,rinv33);
1087 fjx1 = _mm_setzero_pd();
1088 fjy1 = _mm_setzero_pd();
1089 fjz1 = _mm_setzero_pd();
1090 fjx2 = _mm_setzero_pd();
1091 fjy2 = _mm_setzero_pd();
1092 fjz2 = _mm_setzero_pd();
1093 fjx3 = _mm_setzero_pd();
1094 fjy3 = _mm_setzero_pd();
1095 fjz3 = _mm_setzero_pd();
1097 /**************************
1098 * CALCULATE INTERACTIONS *
1099 **************************/
1101 /* COULOMB ELECTROSTATICS */
1102 velec = _mm_mul_pd(qq11,rinv11);
1103 felec = _mm_mul_pd(velec,rinvsq11);
1107 /* Calculate temporary vectorial force */
1108 tx = _mm_mul_pd(fscal,dx11);
1109 ty = _mm_mul_pd(fscal,dy11);
1110 tz = _mm_mul_pd(fscal,dz11);
1112 /* Update vectorial force */
1113 fix1 = _mm_add_pd(fix1,tx);
1114 fiy1 = _mm_add_pd(fiy1,ty);
1115 fiz1 = _mm_add_pd(fiz1,tz);
1117 fjx1 = _mm_add_pd(fjx1,tx);
1118 fjy1 = _mm_add_pd(fjy1,ty);
1119 fjz1 = _mm_add_pd(fjz1,tz);
1121 /**************************
1122 * CALCULATE INTERACTIONS *
1123 **************************/
1125 /* COULOMB ELECTROSTATICS */
1126 velec = _mm_mul_pd(qq12,rinv12);
1127 felec = _mm_mul_pd(velec,rinvsq12);
1131 /* Calculate temporary vectorial force */
1132 tx = _mm_mul_pd(fscal,dx12);
1133 ty = _mm_mul_pd(fscal,dy12);
1134 tz = _mm_mul_pd(fscal,dz12);
1136 /* Update vectorial force */
1137 fix1 = _mm_add_pd(fix1,tx);
1138 fiy1 = _mm_add_pd(fiy1,ty);
1139 fiz1 = _mm_add_pd(fiz1,tz);
1141 fjx2 = _mm_add_pd(fjx2,tx);
1142 fjy2 = _mm_add_pd(fjy2,ty);
1143 fjz2 = _mm_add_pd(fjz2,tz);
1145 /**************************
1146 * CALCULATE INTERACTIONS *
1147 **************************/
1149 /* COULOMB ELECTROSTATICS */
1150 velec = _mm_mul_pd(qq13,rinv13);
1151 felec = _mm_mul_pd(velec,rinvsq13);
1155 /* Calculate temporary vectorial force */
1156 tx = _mm_mul_pd(fscal,dx13);
1157 ty = _mm_mul_pd(fscal,dy13);
1158 tz = _mm_mul_pd(fscal,dz13);
1160 /* Update vectorial force */
1161 fix1 = _mm_add_pd(fix1,tx);
1162 fiy1 = _mm_add_pd(fiy1,ty);
1163 fiz1 = _mm_add_pd(fiz1,tz);
1165 fjx3 = _mm_add_pd(fjx3,tx);
1166 fjy3 = _mm_add_pd(fjy3,ty);
1167 fjz3 = _mm_add_pd(fjz3,tz);
1169 /**************************
1170 * CALCULATE INTERACTIONS *
1171 **************************/
1173 /* COULOMB ELECTROSTATICS */
1174 velec = _mm_mul_pd(qq21,rinv21);
1175 felec = _mm_mul_pd(velec,rinvsq21);
1179 /* Calculate temporary vectorial force */
1180 tx = _mm_mul_pd(fscal,dx21);
1181 ty = _mm_mul_pd(fscal,dy21);
1182 tz = _mm_mul_pd(fscal,dz21);
1184 /* Update vectorial force */
1185 fix2 = _mm_add_pd(fix2,tx);
1186 fiy2 = _mm_add_pd(fiy2,ty);
1187 fiz2 = _mm_add_pd(fiz2,tz);
1189 fjx1 = _mm_add_pd(fjx1,tx);
1190 fjy1 = _mm_add_pd(fjy1,ty);
1191 fjz1 = _mm_add_pd(fjz1,tz);
1193 /**************************
1194 * CALCULATE INTERACTIONS *
1195 **************************/
1197 /* COULOMB ELECTROSTATICS */
1198 velec = _mm_mul_pd(qq22,rinv22);
1199 felec = _mm_mul_pd(velec,rinvsq22);
1203 /* Calculate temporary vectorial force */
1204 tx = _mm_mul_pd(fscal,dx22);
1205 ty = _mm_mul_pd(fscal,dy22);
1206 tz = _mm_mul_pd(fscal,dz22);
1208 /* Update vectorial force */
1209 fix2 = _mm_add_pd(fix2,tx);
1210 fiy2 = _mm_add_pd(fiy2,ty);
1211 fiz2 = _mm_add_pd(fiz2,tz);
1213 fjx2 = _mm_add_pd(fjx2,tx);
1214 fjy2 = _mm_add_pd(fjy2,ty);
1215 fjz2 = _mm_add_pd(fjz2,tz);
1217 /**************************
1218 * CALCULATE INTERACTIONS *
1219 **************************/
1221 /* COULOMB ELECTROSTATICS */
1222 velec = _mm_mul_pd(qq23,rinv23);
1223 felec = _mm_mul_pd(velec,rinvsq23);
1227 /* Calculate temporary vectorial force */
1228 tx = _mm_mul_pd(fscal,dx23);
1229 ty = _mm_mul_pd(fscal,dy23);
1230 tz = _mm_mul_pd(fscal,dz23);
1232 /* Update vectorial force */
1233 fix2 = _mm_add_pd(fix2,tx);
1234 fiy2 = _mm_add_pd(fiy2,ty);
1235 fiz2 = _mm_add_pd(fiz2,tz);
1237 fjx3 = _mm_add_pd(fjx3,tx);
1238 fjy3 = _mm_add_pd(fjy3,ty);
1239 fjz3 = _mm_add_pd(fjz3,tz);
1241 /**************************
1242 * CALCULATE INTERACTIONS *
1243 **************************/
1245 /* COULOMB ELECTROSTATICS */
1246 velec = _mm_mul_pd(qq31,rinv31);
1247 felec = _mm_mul_pd(velec,rinvsq31);
1251 /* Calculate temporary vectorial force */
1252 tx = _mm_mul_pd(fscal,dx31);
1253 ty = _mm_mul_pd(fscal,dy31);
1254 tz = _mm_mul_pd(fscal,dz31);
1256 /* Update vectorial force */
1257 fix3 = _mm_add_pd(fix3,tx);
1258 fiy3 = _mm_add_pd(fiy3,ty);
1259 fiz3 = _mm_add_pd(fiz3,tz);
1261 fjx1 = _mm_add_pd(fjx1,tx);
1262 fjy1 = _mm_add_pd(fjy1,ty);
1263 fjz1 = _mm_add_pd(fjz1,tz);
1265 /**************************
1266 * CALCULATE INTERACTIONS *
1267 **************************/
1269 /* COULOMB ELECTROSTATICS */
1270 velec = _mm_mul_pd(qq32,rinv32);
1271 felec = _mm_mul_pd(velec,rinvsq32);
1275 /* Calculate temporary vectorial force */
1276 tx = _mm_mul_pd(fscal,dx32);
1277 ty = _mm_mul_pd(fscal,dy32);
1278 tz = _mm_mul_pd(fscal,dz32);
1280 /* Update vectorial force */
1281 fix3 = _mm_add_pd(fix3,tx);
1282 fiy3 = _mm_add_pd(fiy3,ty);
1283 fiz3 = _mm_add_pd(fiz3,tz);
1285 fjx2 = _mm_add_pd(fjx2,tx);
1286 fjy2 = _mm_add_pd(fjy2,ty);
1287 fjz2 = _mm_add_pd(fjz2,tz);
1289 /**************************
1290 * CALCULATE INTERACTIONS *
1291 **************************/
1293 /* COULOMB ELECTROSTATICS */
1294 velec = _mm_mul_pd(qq33,rinv33);
1295 felec = _mm_mul_pd(velec,rinvsq33);
1299 /* Calculate temporary vectorial force */
1300 tx = _mm_mul_pd(fscal,dx33);
1301 ty = _mm_mul_pd(fscal,dy33);
1302 tz = _mm_mul_pd(fscal,dz33);
1304 /* Update vectorial force */
1305 fix3 = _mm_add_pd(fix3,tx);
1306 fiy3 = _mm_add_pd(fiy3,ty);
1307 fiz3 = _mm_add_pd(fiz3,tz);
1309 fjx3 = _mm_add_pd(fjx3,tx);
1310 fjy3 = _mm_add_pd(fjy3,ty);
1311 fjz3 = _mm_add_pd(fjz3,tz);
1313 gmx_mm_decrement_3rvec_2ptr_swizzle_pd(f+j_coord_offsetA+DIM,f+j_coord_offsetB+DIM,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
1315 /* Inner loop uses 243 flops */
1318 if(jidx<j_index_end)
1322 j_coord_offsetA = DIM*jnrA;
1324 /* load j atom coordinates */
1325 gmx_mm_load_3rvec_1ptr_swizzle_pd(x+j_coord_offsetA+DIM,
1326 &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
1328 /* Calculate displacement vector */
1329 dx11 = _mm_sub_pd(ix1,jx1);
1330 dy11 = _mm_sub_pd(iy1,jy1);
1331 dz11 = _mm_sub_pd(iz1,jz1);
1332 dx12 = _mm_sub_pd(ix1,jx2);
1333 dy12 = _mm_sub_pd(iy1,jy2);
1334 dz12 = _mm_sub_pd(iz1,jz2);
1335 dx13 = _mm_sub_pd(ix1,jx3);
1336 dy13 = _mm_sub_pd(iy1,jy3);
1337 dz13 = _mm_sub_pd(iz1,jz3);
1338 dx21 = _mm_sub_pd(ix2,jx1);
1339 dy21 = _mm_sub_pd(iy2,jy1);
1340 dz21 = _mm_sub_pd(iz2,jz1);
1341 dx22 = _mm_sub_pd(ix2,jx2);
1342 dy22 = _mm_sub_pd(iy2,jy2);
1343 dz22 = _mm_sub_pd(iz2,jz2);
1344 dx23 = _mm_sub_pd(ix2,jx3);
1345 dy23 = _mm_sub_pd(iy2,jy3);
1346 dz23 = _mm_sub_pd(iz2,jz3);
1347 dx31 = _mm_sub_pd(ix3,jx1);
1348 dy31 = _mm_sub_pd(iy3,jy1);
1349 dz31 = _mm_sub_pd(iz3,jz1);
1350 dx32 = _mm_sub_pd(ix3,jx2);
1351 dy32 = _mm_sub_pd(iy3,jy2);
1352 dz32 = _mm_sub_pd(iz3,jz2);
1353 dx33 = _mm_sub_pd(ix3,jx3);
1354 dy33 = _mm_sub_pd(iy3,jy3);
1355 dz33 = _mm_sub_pd(iz3,jz3);
1357 /* Calculate squared distance and things based on it */
1358 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
1359 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
1360 rsq13 = gmx_mm_calc_rsq_pd(dx13,dy13,dz13);
1361 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
1362 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
1363 rsq23 = gmx_mm_calc_rsq_pd(dx23,dy23,dz23);
1364 rsq31 = gmx_mm_calc_rsq_pd(dx31,dy31,dz31);
1365 rsq32 = gmx_mm_calc_rsq_pd(dx32,dy32,dz32);
1366 rsq33 = gmx_mm_calc_rsq_pd(dx33,dy33,dz33);
1368 rinv11 = sse41_invsqrt_d(rsq11);
1369 rinv12 = sse41_invsqrt_d(rsq12);
1370 rinv13 = sse41_invsqrt_d(rsq13);
1371 rinv21 = sse41_invsqrt_d(rsq21);
1372 rinv22 = sse41_invsqrt_d(rsq22);
1373 rinv23 = sse41_invsqrt_d(rsq23);
1374 rinv31 = sse41_invsqrt_d(rsq31);
1375 rinv32 = sse41_invsqrt_d(rsq32);
1376 rinv33 = sse41_invsqrt_d(rsq33);
1378 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
1379 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
1380 rinvsq13 = _mm_mul_pd(rinv13,rinv13);
1381 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
1382 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
1383 rinvsq23 = _mm_mul_pd(rinv23,rinv23);
1384 rinvsq31 = _mm_mul_pd(rinv31,rinv31);
1385 rinvsq32 = _mm_mul_pd(rinv32,rinv32);
1386 rinvsq33 = _mm_mul_pd(rinv33,rinv33);
1388 fjx1 = _mm_setzero_pd();
1389 fjy1 = _mm_setzero_pd();
1390 fjz1 = _mm_setzero_pd();
1391 fjx2 = _mm_setzero_pd();
1392 fjy2 = _mm_setzero_pd();
1393 fjz2 = _mm_setzero_pd();
1394 fjx3 = _mm_setzero_pd();
1395 fjy3 = _mm_setzero_pd();
1396 fjz3 = _mm_setzero_pd();
1398 /**************************
1399 * CALCULATE INTERACTIONS *
1400 **************************/
1402 /* COULOMB ELECTROSTATICS */
1403 velec = _mm_mul_pd(qq11,rinv11);
1404 felec = _mm_mul_pd(velec,rinvsq11);
1408 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1410 /* Calculate temporary vectorial force */
1411 tx = _mm_mul_pd(fscal,dx11);
1412 ty = _mm_mul_pd(fscal,dy11);
1413 tz = _mm_mul_pd(fscal,dz11);
1415 /* Update vectorial force */
1416 fix1 = _mm_add_pd(fix1,tx);
1417 fiy1 = _mm_add_pd(fiy1,ty);
1418 fiz1 = _mm_add_pd(fiz1,tz);
1420 fjx1 = _mm_add_pd(fjx1,tx);
1421 fjy1 = _mm_add_pd(fjy1,ty);
1422 fjz1 = _mm_add_pd(fjz1,tz);
1424 /**************************
1425 * CALCULATE INTERACTIONS *
1426 **************************/
1428 /* COULOMB ELECTROSTATICS */
1429 velec = _mm_mul_pd(qq12,rinv12);
1430 felec = _mm_mul_pd(velec,rinvsq12);
1434 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1436 /* Calculate temporary vectorial force */
1437 tx = _mm_mul_pd(fscal,dx12);
1438 ty = _mm_mul_pd(fscal,dy12);
1439 tz = _mm_mul_pd(fscal,dz12);
1441 /* Update vectorial force */
1442 fix1 = _mm_add_pd(fix1,tx);
1443 fiy1 = _mm_add_pd(fiy1,ty);
1444 fiz1 = _mm_add_pd(fiz1,tz);
1446 fjx2 = _mm_add_pd(fjx2,tx);
1447 fjy2 = _mm_add_pd(fjy2,ty);
1448 fjz2 = _mm_add_pd(fjz2,tz);
1450 /**************************
1451 * CALCULATE INTERACTIONS *
1452 **************************/
1454 /* COULOMB ELECTROSTATICS */
1455 velec = _mm_mul_pd(qq13,rinv13);
1456 felec = _mm_mul_pd(velec,rinvsq13);
1460 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1462 /* Calculate temporary vectorial force */
1463 tx = _mm_mul_pd(fscal,dx13);
1464 ty = _mm_mul_pd(fscal,dy13);
1465 tz = _mm_mul_pd(fscal,dz13);
1467 /* Update vectorial force */
1468 fix1 = _mm_add_pd(fix1,tx);
1469 fiy1 = _mm_add_pd(fiy1,ty);
1470 fiz1 = _mm_add_pd(fiz1,tz);
1472 fjx3 = _mm_add_pd(fjx3,tx);
1473 fjy3 = _mm_add_pd(fjy3,ty);
1474 fjz3 = _mm_add_pd(fjz3,tz);
1476 /**************************
1477 * CALCULATE INTERACTIONS *
1478 **************************/
1480 /* COULOMB ELECTROSTATICS */
1481 velec = _mm_mul_pd(qq21,rinv21);
1482 felec = _mm_mul_pd(velec,rinvsq21);
1486 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1488 /* Calculate temporary vectorial force */
1489 tx = _mm_mul_pd(fscal,dx21);
1490 ty = _mm_mul_pd(fscal,dy21);
1491 tz = _mm_mul_pd(fscal,dz21);
1493 /* Update vectorial force */
1494 fix2 = _mm_add_pd(fix2,tx);
1495 fiy2 = _mm_add_pd(fiy2,ty);
1496 fiz2 = _mm_add_pd(fiz2,tz);
1498 fjx1 = _mm_add_pd(fjx1,tx);
1499 fjy1 = _mm_add_pd(fjy1,ty);
1500 fjz1 = _mm_add_pd(fjz1,tz);
1502 /**************************
1503 * CALCULATE INTERACTIONS *
1504 **************************/
1506 /* COULOMB ELECTROSTATICS */
1507 velec = _mm_mul_pd(qq22,rinv22);
1508 felec = _mm_mul_pd(velec,rinvsq22);
1512 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1514 /* Calculate temporary vectorial force */
1515 tx = _mm_mul_pd(fscal,dx22);
1516 ty = _mm_mul_pd(fscal,dy22);
1517 tz = _mm_mul_pd(fscal,dz22);
1519 /* Update vectorial force */
1520 fix2 = _mm_add_pd(fix2,tx);
1521 fiy2 = _mm_add_pd(fiy2,ty);
1522 fiz2 = _mm_add_pd(fiz2,tz);
1524 fjx2 = _mm_add_pd(fjx2,tx);
1525 fjy2 = _mm_add_pd(fjy2,ty);
1526 fjz2 = _mm_add_pd(fjz2,tz);
1528 /**************************
1529 * CALCULATE INTERACTIONS *
1530 **************************/
1532 /* COULOMB ELECTROSTATICS */
1533 velec = _mm_mul_pd(qq23,rinv23);
1534 felec = _mm_mul_pd(velec,rinvsq23);
1538 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1540 /* Calculate temporary vectorial force */
1541 tx = _mm_mul_pd(fscal,dx23);
1542 ty = _mm_mul_pd(fscal,dy23);
1543 tz = _mm_mul_pd(fscal,dz23);
1545 /* Update vectorial force */
1546 fix2 = _mm_add_pd(fix2,tx);
1547 fiy2 = _mm_add_pd(fiy2,ty);
1548 fiz2 = _mm_add_pd(fiz2,tz);
1550 fjx3 = _mm_add_pd(fjx3,tx);
1551 fjy3 = _mm_add_pd(fjy3,ty);
1552 fjz3 = _mm_add_pd(fjz3,tz);
1554 /**************************
1555 * CALCULATE INTERACTIONS *
1556 **************************/
1558 /* COULOMB ELECTROSTATICS */
1559 velec = _mm_mul_pd(qq31,rinv31);
1560 felec = _mm_mul_pd(velec,rinvsq31);
1564 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1566 /* Calculate temporary vectorial force */
1567 tx = _mm_mul_pd(fscal,dx31);
1568 ty = _mm_mul_pd(fscal,dy31);
1569 tz = _mm_mul_pd(fscal,dz31);
1571 /* Update vectorial force */
1572 fix3 = _mm_add_pd(fix3,tx);
1573 fiy3 = _mm_add_pd(fiy3,ty);
1574 fiz3 = _mm_add_pd(fiz3,tz);
1576 fjx1 = _mm_add_pd(fjx1,tx);
1577 fjy1 = _mm_add_pd(fjy1,ty);
1578 fjz1 = _mm_add_pd(fjz1,tz);
1580 /**************************
1581 * CALCULATE INTERACTIONS *
1582 **************************/
1584 /* COULOMB ELECTROSTATICS */
1585 velec = _mm_mul_pd(qq32,rinv32);
1586 felec = _mm_mul_pd(velec,rinvsq32);
1590 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1592 /* Calculate temporary vectorial force */
1593 tx = _mm_mul_pd(fscal,dx32);
1594 ty = _mm_mul_pd(fscal,dy32);
1595 tz = _mm_mul_pd(fscal,dz32);
1597 /* Update vectorial force */
1598 fix3 = _mm_add_pd(fix3,tx);
1599 fiy3 = _mm_add_pd(fiy3,ty);
1600 fiz3 = _mm_add_pd(fiz3,tz);
1602 fjx2 = _mm_add_pd(fjx2,tx);
1603 fjy2 = _mm_add_pd(fjy2,ty);
1604 fjz2 = _mm_add_pd(fjz2,tz);
1606 /**************************
1607 * CALCULATE INTERACTIONS *
1608 **************************/
1610 /* COULOMB ELECTROSTATICS */
1611 velec = _mm_mul_pd(qq33,rinv33);
1612 felec = _mm_mul_pd(velec,rinvsq33);
1616 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1618 /* Calculate temporary vectorial force */
1619 tx = _mm_mul_pd(fscal,dx33);
1620 ty = _mm_mul_pd(fscal,dy33);
1621 tz = _mm_mul_pd(fscal,dz33);
1623 /* Update vectorial force */
1624 fix3 = _mm_add_pd(fix3,tx);
1625 fiy3 = _mm_add_pd(fiy3,ty);
1626 fiz3 = _mm_add_pd(fiz3,tz);
1628 fjx3 = _mm_add_pd(fjx3,tx);
1629 fjy3 = _mm_add_pd(fjy3,ty);
1630 fjz3 = _mm_add_pd(fjz3,tz);
1632 gmx_mm_decrement_3rvec_1ptr_swizzle_pd(f+j_coord_offsetA+DIM,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
1634 /* Inner loop uses 243 flops */
1637 /* End of innermost loop */
1639 gmx_mm_update_iforce_3atom_swizzle_pd(fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
1640 f+i_coord_offset+DIM,fshift+i_shift_offset);
1642 /* Increment number of inner iterations */
1643 inneriter += j_index_end - j_index_start;
1645 /* Outer loop uses 18 flops */
1648 /* Increment number of outer iterations */
1651 /* Update outer/inner flops */
1653 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W4W4_F,outeriter*18 + inneriter*243);