Merge 'release-4-6' into master
[alexxy/gromacs.git] / src / gromacs / gmxlib / nonbonded / nb_kernel_sse2_single / nb_kernel_ElecRF_VdwLJ_GeomW3P1_sse2_single.c
1 /*
2  * Note: this file was generated by the Gromacs sse2_single kernel generator.
3  *
4  *                This source code is part of
5  *
6  *                 G   R   O   M   A   C   S
7  *
8  * Copyright (c) 2001-2012, The GROMACS Development Team
9  *
10  * Gromacs is a library for molecular simulation and trajectory analysis,
11  * written by Erik Lindahl, David van der Spoel, Berk Hess, and others - for
12  * a full list of developers and information, check out http://www.gromacs.org
13  *
14  * This program is free software; you can redistribute it and/or modify it under
15  * the terms of the GNU Lesser General Public License as published by the Free
16  * Software Foundation; either version 2 of the License, or (at your option) any
17  * later version.
18  *
19  * To help fund GROMACS development, we humbly ask that you cite
20  * the papers people have written on it - you can find them on the website.
21  */
22 #ifdef HAVE_CONFIG_H
23 #include <config.h>
24 #endif
25
26 #include <math.h>
27
28 #include "../nb_kernel.h"
29 #include "types/simple.h"
30 #include "vec.h"
31 #include "nrnb.h"
32
33 #include "gmx_math_x86_sse2_single.h"
34 #include "kernelutil_x86_sse2_single.h"
35
36 /*
37  * Gromacs nonbonded kernel:   nb_kernel_ElecRF_VdwLJ_GeomW3P1_VF_sse2_single
38  * Electrostatics interaction: ReactionField
39  * VdW interaction:            LennardJones
40  * Geometry:                   Water3-Particle
41  * Calculate force/pot:        PotentialAndForce
42  */
43 void
44 nb_kernel_ElecRF_VdwLJ_GeomW3P1_VF_sse2_single
45                     (t_nblist * gmx_restrict                nlist,
46                      rvec * gmx_restrict                    xx,
47                      rvec * gmx_restrict                    ff,
48                      t_forcerec * gmx_restrict              fr,
49                      t_mdatoms * gmx_restrict               mdatoms,
50                      nb_kernel_data_t * gmx_restrict        kernel_data,
51                      t_nrnb * gmx_restrict                  nrnb)
52 {
53     /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or 
54      * just 0 for non-waters.
55      * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
56      * jnr indices corresponding to data put in the four positions in the SIMD register.
57      */
58     int              i_shift_offset,i_coord_offset,outeriter,inneriter;
59     int              j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
60     int              jnrA,jnrB,jnrC,jnrD;
61     int              j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
62     int              *iinr,*jindex,*jjnr,*shiftidx,*gid;
63     real             shX,shY,shZ,rcutoff_scalar;
64     real             *shiftvec,*fshift,*x,*f;
65     __m128           tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
66     int              vdwioffset0;
67     __m128           ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
68     int              vdwioffset1;
69     __m128           ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
70     int              vdwioffset2;
71     __m128           ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
72     int              vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
73     __m128           jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
74     __m128           dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
75     __m128           dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
76     __m128           dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
77     __m128           velec,felec,velecsum,facel,crf,krf,krf2;
78     real             *charge;
79     int              nvdwtype;
80     __m128           rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
81     int              *vdwtype;
82     real             *vdwparam;
83     __m128           one_sixth   = _mm_set1_ps(1.0/6.0);
84     __m128           one_twelfth = _mm_set1_ps(1.0/12.0);
85     __m128           dummy_mask,cutoff_mask;
86     __m128           signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
87     __m128           one     = _mm_set1_ps(1.0);
88     __m128           two     = _mm_set1_ps(2.0);
89     x                = xx[0];
90     f                = ff[0];
91
92     nri              = nlist->nri;
93     iinr             = nlist->iinr;
94     jindex           = nlist->jindex;
95     jjnr             = nlist->jjnr;
96     shiftidx         = nlist->shift;
97     gid              = nlist->gid;
98     shiftvec         = fr->shift_vec[0];
99     fshift           = fr->fshift[0];
100     facel            = _mm_set1_ps(fr->epsfac);
101     charge           = mdatoms->chargeA;
102     krf              = _mm_set1_ps(fr->ic->k_rf);
103     krf2             = _mm_set1_ps(fr->ic->k_rf*2.0);
104     crf              = _mm_set1_ps(fr->ic->c_rf);
105     nvdwtype         = fr->ntype;
106     vdwparam         = fr->nbfp;
107     vdwtype          = mdatoms->typeA;
108
109     /* Setup water-specific parameters */
110     inr              = nlist->iinr[0];
111     iq0              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+0]));
112     iq1              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
113     iq2              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
114     vdwioffset0      = 2*nvdwtype*vdwtype[inr+0];
115
116     /* Avoid stupid compiler warnings */
117     jnrA = jnrB = jnrC = jnrD = 0;
118     j_coord_offsetA = 0;
119     j_coord_offsetB = 0;
120     j_coord_offsetC = 0;
121     j_coord_offsetD = 0;
122
123     outeriter        = 0;
124     inneriter        = 0;
125
126     /* Start outer loop over neighborlists */
127     for(iidx=0; iidx<nri; iidx++)
128     {
129         /* Load shift vector for this list */
130         i_shift_offset   = DIM*shiftidx[iidx];
131         shX              = shiftvec[i_shift_offset+XX];
132         shY              = shiftvec[i_shift_offset+YY];
133         shZ              = shiftvec[i_shift_offset+ZZ];
134
135         /* Load limits for loop over neighbors */
136         j_index_start    = jindex[iidx];
137         j_index_end      = jindex[iidx+1];
138
139         /* Get outer coordinate index */
140         inr              = iinr[iidx];
141         i_coord_offset   = DIM*inr;
142
143         /* Load i particle coords and add shift vector */
144         ix0              = _mm_set1_ps(shX + x[i_coord_offset+DIM*0+XX]);
145         iy0              = _mm_set1_ps(shY + x[i_coord_offset+DIM*0+YY]);
146         iz0              = _mm_set1_ps(shZ + x[i_coord_offset+DIM*0+ZZ]);
147         ix1              = _mm_set1_ps(shX + x[i_coord_offset+DIM*1+XX]);
148         iy1              = _mm_set1_ps(shY + x[i_coord_offset+DIM*1+YY]);
149         iz1              = _mm_set1_ps(shZ + x[i_coord_offset+DIM*1+ZZ]);
150         ix2              = _mm_set1_ps(shX + x[i_coord_offset+DIM*2+XX]);
151         iy2              = _mm_set1_ps(shY + x[i_coord_offset+DIM*2+YY]);
152         iz2              = _mm_set1_ps(shZ + x[i_coord_offset+DIM*2+ZZ]);
153
154         fix0             = _mm_setzero_ps();
155         fiy0             = _mm_setzero_ps();
156         fiz0             = _mm_setzero_ps();
157         fix1             = _mm_setzero_ps();
158         fiy1             = _mm_setzero_ps();
159         fiz1             = _mm_setzero_ps();
160         fix2             = _mm_setzero_ps();
161         fiy2             = _mm_setzero_ps();
162         fiz2             = _mm_setzero_ps();
163
164         /* Reset potential sums */
165         velecsum         = _mm_setzero_ps();
166         vvdwsum          = _mm_setzero_ps();
167
168         /* Start inner kernel loop */
169         for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
170         {
171
172             /* Get j neighbor index, and coordinate index */
173             jnrA             = jjnr[jidx];
174             jnrB             = jjnr[jidx+1];
175             jnrC             = jjnr[jidx+2];
176             jnrD             = jjnr[jidx+3];
177
178             j_coord_offsetA  = DIM*jnrA;
179             j_coord_offsetB  = DIM*jnrB;
180             j_coord_offsetC  = DIM*jnrC;
181             j_coord_offsetD  = DIM*jnrD;
182
183             /* load j atom coordinates */
184             gmx_mm_load_1rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
185                                               x+j_coord_offsetC,x+j_coord_offsetD,
186                                               &jx0,&jy0,&jz0);
187
188             /* Calculate displacement vector */
189             dx00             = _mm_sub_ps(ix0,jx0);
190             dy00             = _mm_sub_ps(iy0,jy0);
191             dz00             = _mm_sub_ps(iz0,jz0);
192             dx10             = _mm_sub_ps(ix1,jx0);
193             dy10             = _mm_sub_ps(iy1,jy0);
194             dz10             = _mm_sub_ps(iz1,jz0);
195             dx20             = _mm_sub_ps(ix2,jx0);
196             dy20             = _mm_sub_ps(iy2,jy0);
197             dz20             = _mm_sub_ps(iz2,jz0);
198
199             /* Calculate squared distance and things based on it */
200             rsq00            = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
201             rsq10            = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
202             rsq20            = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
203
204             rinv00           = gmx_mm_invsqrt_ps(rsq00);
205             rinv10           = gmx_mm_invsqrt_ps(rsq10);
206             rinv20           = gmx_mm_invsqrt_ps(rsq20);
207
208             rinvsq00         = _mm_mul_ps(rinv00,rinv00);
209             rinvsq10         = _mm_mul_ps(rinv10,rinv10);
210             rinvsq20         = _mm_mul_ps(rinv20,rinv20);
211
212             /* Load parameters for j particles */
213             jq0              = gmx_mm_load_4real_swizzle_ps(charge+jnrA+0,charge+jnrB+0,
214                                                               charge+jnrC+0,charge+jnrD+0);
215             vdwjidx0A        = 2*vdwtype[jnrA+0];
216             vdwjidx0B        = 2*vdwtype[jnrB+0];
217             vdwjidx0C        = 2*vdwtype[jnrC+0];
218             vdwjidx0D        = 2*vdwtype[jnrD+0];
219
220             /**************************
221              * CALCULATE INTERACTIONS *
222              **************************/
223
224             /* Compute parameters for interactions between i and j atoms */
225             qq00             = _mm_mul_ps(iq0,jq0);
226             gmx_mm_load_4pair_swizzle_ps(vdwparam+vdwioffset0+vdwjidx0A,
227                                          vdwparam+vdwioffset0+vdwjidx0B,
228                                          vdwparam+vdwioffset0+vdwjidx0C,
229                                          vdwparam+vdwioffset0+vdwjidx0D,
230                                          &c6_00,&c12_00);
231
232             /* REACTION-FIELD ELECTROSTATICS */
233             velec            = _mm_mul_ps(qq00,_mm_sub_ps(_mm_add_ps(rinv00,_mm_mul_ps(krf,rsq00)),crf));
234             felec            = _mm_mul_ps(qq00,_mm_sub_ps(_mm_mul_ps(rinv00,rinvsq00),krf2));
235
236             /* LENNARD-JONES DISPERSION/REPULSION */
237
238             rinvsix          = _mm_mul_ps(_mm_mul_ps(rinvsq00,rinvsq00),rinvsq00);
239             vvdw6            = _mm_mul_ps(c6_00,rinvsix);
240             vvdw12           = _mm_mul_ps(c12_00,_mm_mul_ps(rinvsix,rinvsix));
241             vvdw             = _mm_sub_ps( _mm_mul_ps(vvdw12,one_twelfth) , _mm_mul_ps(vvdw6,one_sixth) );
242             fvdw             = _mm_mul_ps(_mm_sub_ps(vvdw12,vvdw6),rinvsq00);
243
244             /* Update potential sum for this i atom from the interaction with this j atom. */
245             velecsum         = _mm_add_ps(velecsum,velec);
246             vvdwsum          = _mm_add_ps(vvdwsum,vvdw);
247
248             fscal            = _mm_add_ps(felec,fvdw);
249
250             /* Calculate temporary vectorial force */
251             tx               = _mm_mul_ps(fscal,dx00);
252             ty               = _mm_mul_ps(fscal,dy00);
253             tz               = _mm_mul_ps(fscal,dz00);
254
255             /* Update vectorial force */
256             fix0             = _mm_add_ps(fix0,tx);
257             fiy0             = _mm_add_ps(fiy0,ty);
258             fiz0             = _mm_add_ps(fiz0,tz);
259
260             gmx_mm_decrement_1rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
261                                                    f+j_coord_offsetC,f+j_coord_offsetD,
262                                                    tx,ty,tz);
263
264             /**************************
265              * CALCULATE INTERACTIONS *
266              **************************/
267
268             /* Compute parameters for interactions between i and j atoms */
269             qq10             = _mm_mul_ps(iq1,jq0);
270
271             /* REACTION-FIELD ELECTROSTATICS */
272             velec            = _mm_mul_ps(qq10,_mm_sub_ps(_mm_add_ps(rinv10,_mm_mul_ps(krf,rsq10)),crf));
273             felec            = _mm_mul_ps(qq10,_mm_sub_ps(_mm_mul_ps(rinv10,rinvsq10),krf2));
274
275             /* Update potential sum for this i atom from the interaction with this j atom. */
276             velecsum         = _mm_add_ps(velecsum,velec);
277
278             fscal            = felec;
279
280             /* Calculate temporary vectorial force */
281             tx               = _mm_mul_ps(fscal,dx10);
282             ty               = _mm_mul_ps(fscal,dy10);
283             tz               = _mm_mul_ps(fscal,dz10);
284
285             /* Update vectorial force */
286             fix1             = _mm_add_ps(fix1,tx);
287             fiy1             = _mm_add_ps(fiy1,ty);
288             fiz1             = _mm_add_ps(fiz1,tz);
289
290             gmx_mm_decrement_1rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
291                                                    f+j_coord_offsetC,f+j_coord_offsetD,
292                                                    tx,ty,tz);
293
294             /**************************
295              * CALCULATE INTERACTIONS *
296              **************************/
297
298             /* Compute parameters for interactions between i and j atoms */
299             qq20             = _mm_mul_ps(iq2,jq0);
300
301             /* REACTION-FIELD ELECTROSTATICS */
302             velec            = _mm_mul_ps(qq20,_mm_sub_ps(_mm_add_ps(rinv20,_mm_mul_ps(krf,rsq20)),crf));
303             felec            = _mm_mul_ps(qq20,_mm_sub_ps(_mm_mul_ps(rinv20,rinvsq20),krf2));
304
305             /* Update potential sum for this i atom from the interaction with this j atom. */
306             velecsum         = _mm_add_ps(velecsum,velec);
307
308             fscal            = felec;
309
310             /* Calculate temporary vectorial force */
311             tx               = _mm_mul_ps(fscal,dx20);
312             ty               = _mm_mul_ps(fscal,dy20);
313             tz               = _mm_mul_ps(fscal,dz20);
314
315             /* Update vectorial force */
316             fix2             = _mm_add_ps(fix2,tx);
317             fiy2             = _mm_add_ps(fiy2,ty);
318             fiz2             = _mm_add_ps(fiz2,tz);
319
320             gmx_mm_decrement_1rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
321                                                    f+j_coord_offsetC,f+j_coord_offsetD,
322                                                    tx,ty,tz);
323
324             /* Inner loop uses 108 flops */
325         }
326
327         if(jidx<j_index_end)
328         {
329
330             /* Get j neighbor index, and coordinate index */
331             jnrA             = jjnr[jidx];
332             jnrB             = jjnr[jidx+1];
333             jnrC             = jjnr[jidx+2];
334             jnrD             = jjnr[jidx+3];
335
336             /* Sign of each element will be negative for non-real atoms.
337              * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
338              * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
339              */
340             dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
341             jnrA       = (jnrA>=0) ? jnrA : 0;
342             jnrB       = (jnrB>=0) ? jnrB : 0;
343             jnrC       = (jnrC>=0) ? jnrC : 0;
344             jnrD       = (jnrD>=0) ? jnrD : 0;
345
346             j_coord_offsetA  = DIM*jnrA;
347             j_coord_offsetB  = DIM*jnrB;
348             j_coord_offsetC  = DIM*jnrC;
349             j_coord_offsetD  = DIM*jnrD;
350
351             /* load j atom coordinates */
352             gmx_mm_load_1rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
353                                               x+j_coord_offsetC,x+j_coord_offsetD,
354                                               &jx0,&jy0,&jz0);
355
356             /* Calculate displacement vector */
357             dx00             = _mm_sub_ps(ix0,jx0);
358             dy00             = _mm_sub_ps(iy0,jy0);
359             dz00             = _mm_sub_ps(iz0,jz0);
360             dx10             = _mm_sub_ps(ix1,jx0);
361             dy10             = _mm_sub_ps(iy1,jy0);
362             dz10             = _mm_sub_ps(iz1,jz0);
363             dx20             = _mm_sub_ps(ix2,jx0);
364             dy20             = _mm_sub_ps(iy2,jy0);
365             dz20             = _mm_sub_ps(iz2,jz0);
366
367             /* Calculate squared distance and things based on it */
368             rsq00            = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
369             rsq10            = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
370             rsq20            = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
371
372             rinv00           = gmx_mm_invsqrt_ps(rsq00);
373             rinv10           = gmx_mm_invsqrt_ps(rsq10);
374             rinv20           = gmx_mm_invsqrt_ps(rsq20);
375
376             rinvsq00         = _mm_mul_ps(rinv00,rinv00);
377             rinvsq10         = _mm_mul_ps(rinv10,rinv10);
378             rinvsq20         = _mm_mul_ps(rinv20,rinv20);
379
380             /* Load parameters for j particles */
381             jq0              = gmx_mm_load_4real_swizzle_ps(charge+jnrA+0,charge+jnrB+0,
382                                                               charge+jnrC+0,charge+jnrD+0);
383             vdwjidx0A        = 2*vdwtype[jnrA+0];
384             vdwjidx0B        = 2*vdwtype[jnrB+0];
385             vdwjidx0C        = 2*vdwtype[jnrC+0];
386             vdwjidx0D        = 2*vdwtype[jnrD+0];
387
388             /**************************
389              * CALCULATE INTERACTIONS *
390              **************************/
391
392             /* Compute parameters for interactions between i and j atoms */
393             qq00             = _mm_mul_ps(iq0,jq0);
394             gmx_mm_load_4pair_swizzle_ps(vdwparam+vdwioffset0+vdwjidx0A,
395                                          vdwparam+vdwioffset0+vdwjidx0B,
396                                          vdwparam+vdwioffset0+vdwjidx0C,
397                                          vdwparam+vdwioffset0+vdwjidx0D,
398                                          &c6_00,&c12_00);
399
400             /* REACTION-FIELD ELECTROSTATICS */
401             velec            = _mm_mul_ps(qq00,_mm_sub_ps(_mm_add_ps(rinv00,_mm_mul_ps(krf,rsq00)),crf));
402             felec            = _mm_mul_ps(qq00,_mm_sub_ps(_mm_mul_ps(rinv00,rinvsq00),krf2));
403
404             /* LENNARD-JONES DISPERSION/REPULSION */
405
406             rinvsix          = _mm_mul_ps(_mm_mul_ps(rinvsq00,rinvsq00),rinvsq00);
407             vvdw6            = _mm_mul_ps(c6_00,rinvsix);
408             vvdw12           = _mm_mul_ps(c12_00,_mm_mul_ps(rinvsix,rinvsix));
409             vvdw             = _mm_sub_ps( _mm_mul_ps(vvdw12,one_twelfth) , _mm_mul_ps(vvdw6,one_sixth) );
410             fvdw             = _mm_mul_ps(_mm_sub_ps(vvdw12,vvdw6),rinvsq00);
411
412             /* Update potential sum for this i atom from the interaction with this j atom. */
413             velec            = _mm_andnot_ps(dummy_mask,velec);
414             velecsum         = _mm_add_ps(velecsum,velec);
415             vvdw             = _mm_andnot_ps(dummy_mask,vvdw);
416             vvdwsum          = _mm_add_ps(vvdwsum,vvdw);
417
418             fscal            = _mm_add_ps(felec,fvdw);
419
420             fscal            = _mm_andnot_ps(dummy_mask,fscal);
421
422             /* Calculate temporary vectorial force */
423             tx               = _mm_mul_ps(fscal,dx00);
424             ty               = _mm_mul_ps(fscal,dy00);
425             tz               = _mm_mul_ps(fscal,dz00);
426
427             /* Update vectorial force */
428             fix0             = _mm_add_ps(fix0,tx);
429             fiy0             = _mm_add_ps(fiy0,ty);
430             fiz0             = _mm_add_ps(fiz0,tz);
431
432             gmx_mm_decrement_1rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
433                                                    f+j_coord_offsetC,f+j_coord_offsetD,
434                                                    tx,ty,tz);
435
436             /**************************
437              * CALCULATE INTERACTIONS *
438              **************************/
439
440             /* Compute parameters for interactions between i and j atoms */
441             qq10             = _mm_mul_ps(iq1,jq0);
442
443             /* REACTION-FIELD ELECTROSTATICS */
444             velec            = _mm_mul_ps(qq10,_mm_sub_ps(_mm_add_ps(rinv10,_mm_mul_ps(krf,rsq10)),crf));
445             felec            = _mm_mul_ps(qq10,_mm_sub_ps(_mm_mul_ps(rinv10,rinvsq10),krf2));
446
447             /* Update potential sum for this i atom from the interaction with this j atom. */
448             velec            = _mm_andnot_ps(dummy_mask,velec);
449             velecsum         = _mm_add_ps(velecsum,velec);
450
451             fscal            = felec;
452
453             fscal            = _mm_andnot_ps(dummy_mask,fscal);
454
455             /* Calculate temporary vectorial force */
456             tx               = _mm_mul_ps(fscal,dx10);
457             ty               = _mm_mul_ps(fscal,dy10);
458             tz               = _mm_mul_ps(fscal,dz10);
459
460             /* Update vectorial force */
461             fix1             = _mm_add_ps(fix1,tx);
462             fiy1             = _mm_add_ps(fiy1,ty);
463             fiz1             = _mm_add_ps(fiz1,tz);
464
465             gmx_mm_decrement_1rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
466                                                    f+j_coord_offsetC,f+j_coord_offsetD,
467                                                    tx,ty,tz);
468
469             /**************************
470              * CALCULATE INTERACTIONS *
471              **************************/
472
473             /* Compute parameters for interactions between i and j atoms */
474             qq20             = _mm_mul_ps(iq2,jq0);
475
476             /* REACTION-FIELD ELECTROSTATICS */
477             velec            = _mm_mul_ps(qq20,_mm_sub_ps(_mm_add_ps(rinv20,_mm_mul_ps(krf,rsq20)),crf));
478             felec            = _mm_mul_ps(qq20,_mm_sub_ps(_mm_mul_ps(rinv20,rinvsq20),krf2));
479
480             /* Update potential sum for this i atom from the interaction with this j atom. */
481             velec            = _mm_andnot_ps(dummy_mask,velec);
482             velecsum         = _mm_add_ps(velecsum,velec);
483
484             fscal            = felec;
485
486             fscal            = _mm_andnot_ps(dummy_mask,fscal);
487
488             /* Calculate temporary vectorial force */
489             tx               = _mm_mul_ps(fscal,dx20);
490             ty               = _mm_mul_ps(fscal,dy20);
491             tz               = _mm_mul_ps(fscal,dz20);
492
493             /* Update vectorial force */
494             fix2             = _mm_add_ps(fix2,tx);
495             fiy2             = _mm_add_ps(fiy2,ty);
496             fiz2             = _mm_add_ps(fiz2,tz);
497
498             gmx_mm_decrement_1rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
499                                                    f+j_coord_offsetC,f+j_coord_offsetD,
500                                                    tx,ty,tz);
501
502             /* Inner loop uses 108 flops */
503         }
504
505         /* End of innermost loop */
506
507         gmx_mm_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
508                                               f+i_coord_offset,fshift+i_shift_offset);
509
510         ggid                        = gid[iidx];
511         /* Update potential energies */
512         gmx_mm_update_1pot_ps(velecsum,kernel_data->energygrp_elec+ggid);
513         gmx_mm_update_1pot_ps(vvdwsum,kernel_data->energygrp_vdw+ggid);
514
515         /* Increment number of inner iterations */
516         inneriter                  += j_index_end - j_index_start;
517
518         /* Outer loop uses 29 flops */
519     }
520
521     /* Increment number of outer iterations */
522     outeriter        += nri;
523
524     /* Update outer/inner flops */
525
526     inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3_VF,outeriter*29 + inneriter*108);
527 }
528 /*
529  * Gromacs nonbonded kernel:   nb_kernel_ElecRF_VdwLJ_GeomW3P1_F_sse2_single
530  * Electrostatics interaction: ReactionField
531  * VdW interaction:            LennardJones
532  * Geometry:                   Water3-Particle
533  * Calculate force/pot:        Force
534  */
535 void
536 nb_kernel_ElecRF_VdwLJ_GeomW3P1_F_sse2_single
537                     (t_nblist * gmx_restrict                nlist,
538                      rvec * gmx_restrict                    xx,
539                      rvec * gmx_restrict                    ff,
540                      t_forcerec * gmx_restrict              fr,
541                      t_mdatoms * gmx_restrict               mdatoms,
542                      nb_kernel_data_t * gmx_restrict        kernel_data,
543                      t_nrnb * gmx_restrict                  nrnb)
544 {
545     /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or 
546      * just 0 for non-waters.
547      * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
548      * jnr indices corresponding to data put in the four positions in the SIMD register.
549      */
550     int              i_shift_offset,i_coord_offset,outeriter,inneriter;
551     int              j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
552     int              jnrA,jnrB,jnrC,jnrD;
553     int              j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
554     int              *iinr,*jindex,*jjnr,*shiftidx,*gid;
555     real             shX,shY,shZ,rcutoff_scalar;
556     real             *shiftvec,*fshift,*x,*f;
557     __m128           tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
558     int              vdwioffset0;
559     __m128           ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
560     int              vdwioffset1;
561     __m128           ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
562     int              vdwioffset2;
563     __m128           ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
564     int              vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
565     __m128           jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
566     __m128           dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
567     __m128           dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
568     __m128           dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
569     __m128           velec,felec,velecsum,facel,crf,krf,krf2;
570     real             *charge;
571     int              nvdwtype;
572     __m128           rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
573     int              *vdwtype;
574     real             *vdwparam;
575     __m128           one_sixth   = _mm_set1_ps(1.0/6.0);
576     __m128           one_twelfth = _mm_set1_ps(1.0/12.0);
577     __m128           dummy_mask,cutoff_mask;
578     __m128           signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
579     __m128           one     = _mm_set1_ps(1.0);
580     __m128           two     = _mm_set1_ps(2.0);
581     x                = xx[0];
582     f                = ff[0];
583
584     nri              = nlist->nri;
585     iinr             = nlist->iinr;
586     jindex           = nlist->jindex;
587     jjnr             = nlist->jjnr;
588     shiftidx         = nlist->shift;
589     gid              = nlist->gid;
590     shiftvec         = fr->shift_vec[0];
591     fshift           = fr->fshift[0];
592     facel            = _mm_set1_ps(fr->epsfac);
593     charge           = mdatoms->chargeA;
594     krf              = _mm_set1_ps(fr->ic->k_rf);
595     krf2             = _mm_set1_ps(fr->ic->k_rf*2.0);
596     crf              = _mm_set1_ps(fr->ic->c_rf);
597     nvdwtype         = fr->ntype;
598     vdwparam         = fr->nbfp;
599     vdwtype          = mdatoms->typeA;
600
601     /* Setup water-specific parameters */
602     inr              = nlist->iinr[0];
603     iq0              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+0]));
604     iq1              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
605     iq2              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
606     vdwioffset0      = 2*nvdwtype*vdwtype[inr+0];
607
608     /* Avoid stupid compiler warnings */
609     jnrA = jnrB = jnrC = jnrD = 0;
610     j_coord_offsetA = 0;
611     j_coord_offsetB = 0;
612     j_coord_offsetC = 0;
613     j_coord_offsetD = 0;
614
615     outeriter        = 0;
616     inneriter        = 0;
617
618     /* Start outer loop over neighborlists */
619     for(iidx=0; iidx<nri; iidx++)
620     {
621         /* Load shift vector for this list */
622         i_shift_offset   = DIM*shiftidx[iidx];
623         shX              = shiftvec[i_shift_offset+XX];
624         shY              = shiftvec[i_shift_offset+YY];
625         shZ              = shiftvec[i_shift_offset+ZZ];
626
627         /* Load limits for loop over neighbors */
628         j_index_start    = jindex[iidx];
629         j_index_end      = jindex[iidx+1];
630
631         /* Get outer coordinate index */
632         inr              = iinr[iidx];
633         i_coord_offset   = DIM*inr;
634
635         /* Load i particle coords and add shift vector */
636         ix0              = _mm_set1_ps(shX + x[i_coord_offset+DIM*0+XX]);
637         iy0              = _mm_set1_ps(shY + x[i_coord_offset+DIM*0+YY]);
638         iz0              = _mm_set1_ps(shZ + x[i_coord_offset+DIM*0+ZZ]);
639         ix1              = _mm_set1_ps(shX + x[i_coord_offset+DIM*1+XX]);
640         iy1              = _mm_set1_ps(shY + x[i_coord_offset+DIM*1+YY]);
641         iz1              = _mm_set1_ps(shZ + x[i_coord_offset+DIM*1+ZZ]);
642         ix2              = _mm_set1_ps(shX + x[i_coord_offset+DIM*2+XX]);
643         iy2              = _mm_set1_ps(shY + x[i_coord_offset+DIM*2+YY]);
644         iz2              = _mm_set1_ps(shZ + x[i_coord_offset+DIM*2+ZZ]);
645
646         fix0             = _mm_setzero_ps();
647         fiy0             = _mm_setzero_ps();
648         fiz0             = _mm_setzero_ps();
649         fix1             = _mm_setzero_ps();
650         fiy1             = _mm_setzero_ps();
651         fiz1             = _mm_setzero_ps();
652         fix2             = _mm_setzero_ps();
653         fiy2             = _mm_setzero_ps();
654         fiz2             = _mm_setzero_ps();
655
656         /* Start inner kernel loop */
657         for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
658         {
659
660             /* Get j neighbor index, and coordinate index */
661             jnrA             = jjnr[jidx];
662             jnrB             = jjnr[jidx+1];
663             jnrC             = jjnr[jidx+2];
664             jnrD             = jjnr[jidx+3];
665
666             j_coord_offsetA  = DIM*jnrA;
667             j_coord_offsetB  = DIM*jnrB;
668             j_coord_offsetC  = DIM*jnrC;
669             j_coord_offsetD  = DIM*jnrD;
670
671             /* load j atom coordinates */
672             gmx_mm_load_1rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
673                                               x+j_coord_offsetC,x+j_coord_offsetD,
674                                               &jx0,&jy0,&jz0);
675
676             /* Calculate displacement vector */
677             dx00             = _mm_sub_ps(ix0,jx0);
678             dy00             = _mm_sub_ps(iy0,jy0);
679             dz00             = _mm_sub_ps(iz0,jz0);
680             dx10             = _mm_sub_ps(ix1,jx0);
681             dy10             = _mm_sub_ps(iy1,jy0);
682             dz10             = _mm_sub_ps(iz1,jz0);
683             dx20             = _mm_sub_ps(ix2,jx0);
684             dy20             = _mm_sub_ps(iy2,jy0);
685             dz20             = _mm_sub_ps(iz2,jz0);
686
687             /* Calculate squared distance and things based on it */
688             rsq00            = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
689             rsq10            = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
690             rsq20            = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
691
692             rinv00           = gmx_mm_invsqrt_ps(rsq00);
693             rinv10           = gmx_mm_invsqrt_ps(rsq10);
694             rinv20           = gmx_mm_invsqrt_ps(rsq20);
695
696             rinvsq00         = _mm_mul_ps(rinv00,rinv00);
697             rinvsq10         = _mm_mul_ps(rinv10,rinv10);
698             rinvsq20         = _mm_mul_ps(rinv20,rinv20);
699
700             /* Load parameters for j particles */
701             jq0              = gmx_mm_load_4real_swizzle_ps(charge+jnrA+0,charge+jnrB+0,
702                                                               charge+jnrC+0,charge+jnrD+0);
703             vdwjidx0A        = 2*vdwtype[jnrA+0];
704             vdwjidx0B        = 2*vdwtype[jnrB+0];
705             vdwjidx0C        = 2*vdwtype[jnrC+0];
706             vdwjidx0D        = 2*vdwtype[jnrD+0];
707
708             /**************************
709              * CALCULATE INTERACTIONS *
710              **************************/
711
712             /* Compute parameters for interactions between i and j atoms */
713             qq00             = _mm_mul_ps(iq0,jq0);
714             gmx_mm_load_4pair_swizzle_ps(vdwparam+vdwioffset0+vdwjidx0A,
715                                          vdwparam+vdwioffset0+vdwjidx0B,
716                                          vdwparam+vdwioffset0+vdwjidx0C,
717                                          vdwparam+vdwioffset0+vdwjidx0D,
718                                          &c6_00,&c12_00);
719
720             /* REACTION-FIELD ELECTROSTATICS */
721             felec            = _mm_mul_ps(qq00,_mm_sub_ps(_mm_mul_ps(rinv00,rinvsq00),krf2));
722
723             /* LENNARD-JONES DISPERSION/REPULSION */
724
725             rinvsix          = _mm_mul_ps(_mm_mul_ps(rinvsq00,rinvsq00),rinvsq00);
726             fvdw             = _mm_mul_ps(_mm_sub_ps(_mm_mul_ps(c12_00,rinvsix),c6_00),_mm_mul_ps(rinvsix,rinvsq00));
727
728             fscal            = _mm_add_ps(felec,fvdw);
729
730             /* Calculate temporary vectorial force */
731             tx               = _mm_mul_ps(fscal,dx00);
732             ty               = _mm_mul_ps(fscal,dy00);
733             tz               = _mm_mul_ps(fscal,dz00);
734
735             /* Update vectorial force */
736             fix0             = _mm_add_ps(fix0,tx);
737             fiy0             = _mm_add_ps(fiy0,ty);
738             fiz0             = _mm_add_ps(fiz0,tz);
739
740             gmx_mm_decrement_1rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
741                                                    f+j_coord_offsetC,f+j_coord_offsetD,
742                                                    tx,ty,tz);
743
744             /**************************
745              * CALCULATE INTERACTIONS *
746              **************************/
747
748             /* Compute parameters for interactions between i and j atoms */
749             qq10             = _mm_mul_ps(iq1,jq0);
750
751             /* REACTION-FIELD ELECTROSTATICS */
752             felec            = _mm_mul_ps(qq10,_mm_sub_ps(_mm_mul_ps(rinv10,rinvsq10),krf2));
753
754             fscal            = felec;
755
756             /* Calculate temporary vectorial force */
757             tx               = _mm_mul_ps(fscal,dx10);
758             ty               = _mm_mul_ps(fscal,dy10);
759             tz               = _mm_mul_ps(fscal,dz10);
760
761             /* Update vectorial force */
762             fix1             = _mm_add_ps(fix1,tx);
763             fiy1             = _mm_add_ps(fiy1,ty);
764             fiz1             = _mm_add_ps(fiz1,tz);
765
766             gmx_mm_decrement_1rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
767                                                    f+j_coord_offsetC,f+j_coord_offsetD,
768                                                    tx,ty,tz);
769
770             /**************************
771              * CALCULATE INTERACTIONS *
772              **************************/
773
774             /* Compute parameters for interactions between i and j atoms */
775             qq20             = _mm_mul_ps(iq2,jq0);
776
777             /* REACTION-FIELD ELECTROSTATICS */
778             felec            = _mm_mul_ps(qq20,_mm_sub_ps(_mm_mul_ps(rinv20,rinvsq20),krf2));
779
780             fscal            = felec;
781
782             /* Calculate temporary vectorial force */
783             tx               = _mm_mul_ps(fscal,dx20);
784             ty               = _mm_mul_ps(fscal,dy20);
785             tz               = _mm_mul_ps(fscal,dz20);
786
787             /* Update vectorial force */
788             fix2             = _mm_add_ps(fix2,tx);
789             fiy2             = _mm_add_ps(fiy2,ty);
790             fiz2             = _mm_add_ps(fiz2,tz);
791
792             gmx_mm_decrement_1rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
793                                                    f+j_coord_offsetC,f+j_coord_offsetD,
794                                                    tx,ty,tz);
795
796             /* Inner loop uses 88 flops */
797         }
798
799         if(jidx<j_index_end)
800         {
801
802             /* Get j neighbor index, and coordinate index */
803             jnrA             = jjnr[jidx];
804             jnrB             = jjnr[jidx+1];
805             jnrC             = jjnr[jidx+2];
806             jnrD             = jjnr[jidx+3];
807
808             /* Sign of each element will be negative for non-real atoms.
809              * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
810              * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
811              */
812             dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
813             jnrA       = (jnrA>=0) ? jnrA : 0;
814             jnrB       = (jnrB>=0) ? jnrB : 0;
815             jnrC       = (jnrC>=0) ? jnrC : 0;
816             jnrD       = (jnrD>=0) ? jnrD : 0;
817
818             j_coord_offsetA  = DIM*jnrA;
819             j_coord_offsetB  = DIM*jnrB;
820             j_coord_offsetC  = DIM*jnrC;
821             j_coord_offsetD  = DIM*jnrD;
822
823             /* load j atom coordinates */
824             gmx_mm_load_1rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
825                                               x+j_coord_offsetC,x+j_coord_offsetD,
826                                               &jx0,&jy0,&jz0);
827
828             /* Calculate displacement vector */
829             dx00             = _mm_sub_ps(ix0,jx0);
830             dy00             = _mm_sub_ps(iy0,jy0);
831             dz00             = _mm_sub_ps(iz0,jz0);
832             dx10             = _mm_sub_ps(ix1,jx0);
833             dy10             = _mm_sub_ps(iy1,jy0);
834             dz10             = _mm_sub_ps(iz1,jz0);
835             dx20             = _mm_sub_ps(ix2,jx0);
836             dy20             = _mm_sub_ps(iy2,jy0);
837             dz20             = _mm_sub_ps(iz2,jz0);
838
839             /* Calculate squared distance and things based on it */
840             rsq00            = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
841             rsq10            = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
842             rsq20            = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
843
844             rinv00           = gmx_mm_invsqrt_ps(rsq00);
845             rinv10           = gmx_mm_invsqrt_ps(rsq10);
846             rinv20           = gmx_mm_invsqrt_ps(rsq20);
847
848             rinvsq00         = _mm_mul_ps(rinv00,rinv00);
849             rinvsq10         = _mm_mul_ps(rinv10,rinv10);
850             rinvsq20         = _mm_mul_ps(rinv20,rinv20);
851
852             /* Load parameters for j particles */
853             jq0              = gmx_mm_load_4real_swizzle_ps(charge+jnrA+0,charge+jnrB+0,
854                                                               charge+jnrC+0,charge+jnrD+0);
855             vdwjidx0A        = 2*vdwtype[jnrA+0];
856             vdwjidx0B        = 2*vdwtype[jnrB+0];
857             vdwjidx0C        = 2*vdwtype[jnrC+0];
858             vdwjidx0D        = 2*vdwtype[jnrD+0];
859
860             /**************************
861              * CALCULATE INTERACTIONS *
862              **************************/
863
864             /* Compute parameters for interactions between i and j atoms */
865             qq00             = _mm_mul_ps(iq0,jq0);
866             gmx_mm_load_4pair_swizzle_ps(vdwparam+vdwioffset0+vdwjidx0A,
867                                          vdwparam+vdwioffset0+vdwjidx0B,
868                                          vdwparam+vdwioffset0+vdwjidx0C,
869                                          vdwparam+vdwioffset0+vdwjidx0D,
870                                          &c6_00,&c12_00);
871
872             /* REACTION-FIELD ELECTROSTATICS */
873             felec            = _mm_mul_ps(qq00,_mm_sub_ps(_mm_mul_ps(rinv00,rinvsq00),krf2));
874
875             /* LENNARD-JONES DISPERSION/REPULSION */
876
877             rinvsix          = _mm_mul_ps(_mm_mul_ps(rinvsq00,rinvsq00),rinvsq00);
878             fvdw             = _mm_mul_ps(_mm_sub_ps(_mm_mul_ps(c12_00,rinvsix),c6_00),_mm_mul_ps(rinvsix,rinvsq00));
879
880             fscal            = _mm_add_ps(felec,fvdw);
881
882             fscal            = _mm_andnot_ps(dummy_mask,fscal);
883
884             /* Calculate temporary vectorial force */
885             tx               = _mm_mul_ps(fscal,dx00);
886             ty               = _mm_mul_ps(fscal,dy00);
887             tz               = _mm_mul_ps(fscal,dz00);
888
889             /* Update vectorial force */
890             fix0             = _mm_add_ps(fix0,tx);
891             fiy0             = _mm_add_ps(fiy0,ty);
892             fiz0             = _mm_add_ps(fiz0,tz);
893
894             gmx_mm_decrement_1rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
895                                                    f+j_coord_offsetC,f+j_coord_offsetD,
896                                                    tx,ty,tz);
897
898             /**************************
899              * CALCULATE INTERACTIONS *
900              **************************/
901
902             /* Compute parameters for interactions between i and j atoms */
903             qq10             = _mm_mul_ps(iq1,jq0);
904
905             /* REACTION-FIELD ELECTROSTATICS */
906             felec            = _mm_mul_ps(qq10,_mm_sub_ps(_mm_mul_ps(rinv10,rinvsq10),krf2));
907
908             fscal            = felec;
909
910             fscal            = _mm_andnot_ps(dummy_mask,fscal);
911
912             /* Calculate temporary vectorial force */
913             tx               = _mm_mul_ps(fscal,dx10);
914             ty               = _mm_mul_ps(fscal,dy10);
915             tz               = _mm_mul_ps(fscal,dz10);
916
917             /* Update vectorial force */
918             fix1             = _mm_add_ps(fix1,tx);
919             fiy1             = _mm_add_ps(fiy1,ty);
920             fiz1             = _mm_add_ps(fiz1,tz);
921
922             gmx_mm_decrement_1rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
923                                                    f+j_coord_offsetC,f+j_coord_offsetD,
924                                                    tx,ty,tz);
925
926             /**************************
927              * CALCULATE INTERACTIONS *
928              **************************/
929
930             /* Compute parameters for interactions between i and j atoms */
931             qq20             = _mm_mul_ps(iq2,jq0);
932
933             /* REACTION-FIELD ELECTROSTATICS */
934             felec            = _mm_mul_ps(qq20,_mm_sub_ps(_mm_mul_ps(rinv20,rinvsq20),krf2));
935
936             fscal            = felec;
937
938             fscal            = _mm_andnot_ps(dummy_mask,fscal);
939
940             /* Calculate temporary vectorial force */
941             tx               = _mm_mul_ps(fscal,dx20);
942             ty               = _mm_mul_ps(fscal,dy20);
943             tz               = _mm_mul_ps(fscal,dz20);
944
945             /* Update vectorial force */
946             fix2             = _mm_add_ps(fix2,tx);
947             fiy2             = _mm_add_ps(fiy2,ty);
948             fiz2             = _mm_add_ps(fiz2,tz);
949
950             gmx_mm_decrement_1rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
951                                                    f+j_coord_offsetC,f+j_coord_offsetD,
952                                                    tx,ty,tz);
953
954             /* Inner loop uses 88 flops */
955         }
956
957         /* End of innermost loop */
958
959         gmx_mm_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
960                                               f+i_coord_offset,fshift+i_shift_offset);
961
962         /* Increment number of inner iterations */
963         inneriter                  += j_index_end - j_index_start;
964
965         /* Outer loop uses 27 flops */
966     }
967
968     /* Increment number of outer iterations */
969     outeriter        += nri;
970
971     /* Update outer/inner flops */
972
973     inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3_F,outeriter*27 + inneriter*88);
974 }