2 * This file is part of the GROMACS molecular simulation package.
4 * Copyright (c) 2012,2013,2014,2015,2017,2018, by the GROMACS development team, led by
5 * Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
6 * and including many others, as listed in the AUTHORS file in the
7 * top-level source directory and at http://www.gromacs.org.
9 * GROMACS is free software; you can redistribute it and/or
10 * modify it under the terms of the GNU Lesser General Public License
11 * as published by the Free Software Foundation; either version 2.1
12 * of the License, or (at your option) any later version.
14 * GROMACS is distributed in the hope that it will be useful,
15 * but WITHOUT ANY WARRANTY; without even the implied warranty of
16 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
17 * Lesser General Public License for more details.
19 * You should have received a copy of the GNU Lesser General Public
20 * License along with GROMACS; if not, see
21 * http://www.gnu.org/licenses, or write to the Free Software Foundation,
22 * Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
24 * If you want to redistribute modifications to GROMACS, please
25 * consider that scientific software is very special. Version
26 * control is crucial - bugs must be traceable. We will be happy to
27 * consider code for inclusion in the official distribution, but
28 * derived work must not be called official GROMACS. Details are found
29 * in the README & COPYING files - if they are missing, get the
30 * official version at http://www.gromacs.org.
32 * To help us fund GROMACS development, we humbly ask that you cite
33 * the research papers on the package. Check out http://www.gromacs.org.
36 * Note: this file was generated by the GROMACS sse2_single kernel generator.
44 #include "../nb_kernel.h"
45 #include "gromacs/gmxlib/nrnb.h"
47 #include "kernelutil_x86_sse2_single.h"
50 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwCSTab_GeomW4W4_VF_sse2_single
51 * Electrostatics interaction: Ewald
52 * VdW interaction: CubicSplineTable
53 * Geometry: Water4-Water4
54 * Calculate force/pot: PotentialAndForce
57 nb_kernel_ElecEw_VdwCSTab_GeomW4W4_VF_sse2_single
58 (t_nblist * gmx_restrict nlist,
59 rvec * gmx_restrict xx,
60 rvec * gmx_restrict ff,
61 struct t_forcerec * gmx_restrict fr,
62 t_mdatoms * gmx_restrict mdatoms,
63 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
64 t_nrnb * gmx_restrict nrnb)
66 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
67 * just 0 for non-waters.
68 * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
69 * jnr indices corresponding to data put in the four positions in the SIMD register.
71 int i_shift_offset,i_coord_offset,outeriter,inneriter;
72 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
73 int jnrA,jnrB,jnrC,jnrD;
74 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
75 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
76 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
78 real *shiftvec,*fshift,*x,*f;
79 real *fjptrA,*fjptrB,*fjptrC,*fjptrD;
81 __m128 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
83 __m128 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
85 __m128 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
87 __m128 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
89 __m128 ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
90 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
91 __m128 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
92 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
93 __m128 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
94 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
95 __m128 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
96 int vdwjidx3A,vdwjidx3B,vdwjidx3C,vdwjidx3D;
97 __m128 jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
98 __m128 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
99 __m128 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
100 __m128 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
101 __m128 dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
102 __m128 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
103 __m128 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
104 __m128 dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
105 __m128 dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
106 __m128 dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
107 __m128 dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
108 __m128 velec,felec,velecsum,facel,crf,krf,krf2;
111 __m128 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
114 __m128 one_sixth = _mm_set1_ps(1.0/6.0);
115 __m128 one_twelfth = _mm_set1_ps(1.0/12.0);
117 __m128i ifour = _mm_set1_epi32(4);
118 __m128 rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
121 __m128 ewtabscale,eweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
123 __m128 dummy_mask,cutoff_mask;
124 __m128 signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
125 __m128 one = _mm_set1_ps(1.0);
126 __m128 two = _mm_set1_ps(2.0);
132 jindex = nlist->jindex;
134 shiftidx = nlist->shift;
136 shiftvec = fr->shift_vec[0];
137 fshift = fr->fshift[0];
138 facel = _mm_set1_ps(fr->ic->epsfac);
139 charge = mdatoms->chargeA;
140 nvdwtype = fr->ntype;
142 vdwtype = mdatoms->typeA;
144 vftab = kernel_data->table_vdw->data;
145 vftabscale = _mm_set1_ps(kernel_data->table_vdw->scale);
147 sh_ewald = _mm_set1_ps(fr->ic->sh_ewald);
148 ewtab = fr->ic->tabq_coul_FDV0;
149 ewtabscale = _mm_set1_ps(fr->ic->tabq_scale);
150 ewtabhalfspace = _mm_set1_ps(0.5/fr->ic->tabq_scale);
152 /* Setup water-specific parameters */
153 inr = nlist->iinr[0];
154 iq1 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
155 iq2 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
156 iq3 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+3]));
157 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
159 jq1 = _mm_set1_ps(charge[inr+1]);
160 jq2 = _mm_set1_ps(charge[inr+2]);
161 jq3 = _mm_set1_ps(charge[inr+3]);
162 vdwjidx0A = 2*vdwtype[inr+0];
163 c6_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A]);
164 c12_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A+1]);
165 qq11 = _mm_mul_ps(iq1,jq1);
166 qq12 = _mm_mul_ps(iq1,jq2);
167 qq13 = _mm_mul_ps(iq1,jq3);
168 qq21 = _mm_mul_ps(iq2,jq1);
169 qq22 = _mm_mul_ps(iq2,jq2);
170 qq23 = _mm_mul_ps(iq2,jq3);
171 qq31 = _mm_mul_ps(iq3,jq1);
172 qq32 = _mm_mul_ps(iq3,jq2);
173 qq33 = _mm_mul_ps(iq3,jq3);
175 /* Avoid stupid compiler warnings */
176 jnrA = jnrB = jnrC = jnrD = 0;
185 for(iidx=0;iidx<4*DIM;iidx++)
190 /* Start outer loop over neighborlists */
191 for(iidx=0; iidx<nri; iidx++)
193 /* Load shift vector for this list */
194 i_shift_offset = DIM*shiftidx[iidx];
196 /* Load limits for loop over neighbors */
197 j_index_start = jindex[iidx];
198 j_index_end = jindex[iidx+1];
200 /* Get outer coordinate index */
202 i_coord_offset = DIM*inr;
204 /* Load i particle coords and add shift vector */
205 gmx_mm_load_shift_and_4rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset,
206 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
208 fix0 = _mm_setzero_ps();
209 fiy0 = _mm_setzero_ps();
210 fiz0 = _mm_setzero_ps();
211 fix1 = _mm_setzero_ps();
212 fiy1 = _mm_setzero_ps();
213 fiz1 = _mm_setzero_ps();
214 fix2 = _mm_setzero_ps();
215 fiy2 = _mm_setzero_ps();
216 fiz2 = _mm_setzero_ps();
217 fix3 = _mm_setzero_ps();
218 fiy3 = _mm_setzero_ps();
219 fiz3 = _mm_setzero_ps();
221 /* Reset potential sums */
222 velecsum = _mm_setzero_ps();
223 vvdwsum = _mm_setzero_ps();
225 /* Start inner kernel loop */
226 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
229 /* Get j neighbor index, and coordinate index */
234 j_coord_offsetA = DIM*jnrA;
235 j_coord_offsetB = DIM*jnrB;
236 j_coord_offsetC = DIM*jnrC;
237 j_coord_offsetD = DIM*jnrD;
239 /* load j atom coordinates */
240 gmx_mm_load_4rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
241 x+j_coord_offsetC,x+j_coord_offsetD,
242 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,
243 &jy2,&jz2,&jx3,&jy3,&jz3);
245 /* Calculate displacement vector */
246 dx00 = _mm_sub_ps(ix0,jx0);
247 dy00 = _mm_sub_ps(iy0,jy0);
248 dz00 = _mm_sub_ps(iz0,jz0);
249 dx11 = _mm_sub_ps(ix1,jx1);
250 dy11 = _mm_sub_ps(iy1,jy1);
251 dz11 = _mm_sub_ps(iz1,jz1);
252 dx12 = _mm_sub_ps(ix1,jx2);
253 dy12 = _mm_sub_ps(iy1,jy2);
254 dz12 = _mm_sub_ps(iz1,jz2);
255 dx13 = _mm_sub_ps(ix1,jx3);
256 dy13 = _mm_sub_ps(iy1,jy3);
257 dz13 = _mm_sub_ps(iz1,jz3);
258 dx21 = _mm_sub_ps(ix2,jx1);
259 dy21 = _mm_sub_ps(iy2,jy1);
260 dz21 = _mm_sub_ps(iz2,jz1);
261 dx22 = _mm_sub_ps(ix2,jx2);
262 dy22 = _mm_sub_ps(iy2,jy2);
263 dz22 = _mm_sub_ps(iz2,jz2);
264 dx23 = _mm_sub_ps(ix2,jx3);
265 dy23 = _mm_sub_ps(iy2,jy3);
266 dz23 = _mm_sub_ps(iz2,jz3);
267 dx31 = _mm_sub_ps(ix3,jx1);
268 dy31 = _mm_sub_ps(iy3,jy1);
269 dz31 = _mm_sub_ps(iz3,jz1);
270 dx32 = _mm_sub_ps(ix3,jx2);
271 dy32 = _mm_sub_ps(iy3,jy2);
272 dz32 = _mm_sub_ps(iz3,jz2);
273 dx33 = _mm_sub_ps(ix3,jx3);
274 dy33 = _mm_sub_ps(iy3,jy3);
275 dz33 = _mm_sub_ps(iz3,jz3);
277 /* Calculate squared distance and things based on it */
278 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
279 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
280 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
281 rsq13 = gmx_mm_calc_rsq_ps(dx13,dy13,dz13);
282 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
283 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
284 rsq23 = gmx_mm_calc_rsq_ps(dx23,dy23,dz23);
285 rsq31 = gmx_mm_calc_rsq_ps(dx31,dy31,dz31);
286 rsq32 = gmx_mm_calc_rsq_ps(dx32,dy32,dz32);
287 rsq33 = gmx_mm_calc_rsq_ps(dx33,dy33,dz33);
289 rinv00 = sse2_invsqrt_f(rsq00);
290 rinv11 = sse2_invsqrt_f(rsq11);
291 rinv12 = sse2_invsqrt_f(rsq12);
292 rinv13 = sse2_invsqrt_f(rsq13);
293 rinv21 = sse2_invsqrt_f(rsq21);
294 rinv22 = sse2_invsqrt_f(rsq22);
295 rinv23 = sse2_invsqrt_f(rsq23);
296 rinv31 = sse2_invsqrt_f(rsq31);
297 rinv32 = sse2_invsqrt_f(rsq32);
298 rinv33 = sse2_invsqrt_f(rsq33);
300 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
301 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
302 rinvsq13 = _mm_mul_ps(rinv13,rinv13);
303 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
304 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
305 rinvsq23 = _mm_mul_ps(rinv23,rinv23);
306 rinvsq31 = _mm_mul_ps(rinv31,rinv31);
307 rinvsq32 = _mm_mul_ps(rinv32,rinv32);
308 rinvsq33 = _mm_mul_ps(rinv33,rinv33);
310 fjx0 = _mm_setzero_ps();
311 fjy0 = _mm_setzero_ps();
312 fjz0 = _mm_setzero_ps();
313 fjx1 = _mm_setzero_ps();
314 fjy1 = _mm_setzero_ps();
315 fjz1 = _mm_setzero_ps();
316 fjx2 = _mm_setzero_ps();
317 fjy2 = _mm_setzero_ps();
318 fjz2 = _mm_setzero_ps();
319 fjx3 = _mm_setzero_ps();
320 fjy3 = _mm_setzero_ps();
321 fjz3 = _mm_setzero_ps();
323 /**************************
324 * CALCULATE INTERACTIONS *
325 **************************/
327 r00 = _mm_mul_ps(rsq00,rinv00);
329 /* Calculate table index by multiplying r with table scale and truncate to integer */
330 rt = _mm_mul_ps(r00,vftabscale);
331 vfitab = _mm_cvttps_epi32(rt);
332 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
333 vfitab = _mm_slli_epi32(vfitab,3);
335 /* CUBIC SPLINE TABLE DISPERSION */
336 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
337 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
338 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
339 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
340 _MM_TRANSPOSE4_PS(Y,F,G,H);
341 Heps = _mm_mul_ps(vfeps,H);
342 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
343 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
344 vvdw6 = _mm_mul_ps(c6_00,VV);
345 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
346 fvdw6 = _mm_mul_ps(c6_00,FF);
348 /* CUBIC SPLINE TABLE REPULSION */
349 vfitab = _mm_add_epi32(vfitab,ifour);
350 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
351 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
352 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
353 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
354 _MM_TRANSPOSE4_PS(Y,F,G,H);
355 Heps = _mm_mul_ps(vfeps,H);
356 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
357 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
358 vvdw12 = _mm_mul_ps(c12_00,VV);
359 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
360 fvdw12 = _mm_mul_ps(c12_00,FF);
361 vvdw = _mm_add_ps(vvdw12,vvdw6);
362 fvdw = _mm_xor_ps(signbit,_mm_mul_ps(_mm_add_ps(fvdw6,fvdw12),_mm_mul_ps(vftabscale,rinv00)));
364 /* Update potential sum for this i atom from the interaction with this j atom. */
365 vvdwsum = _mm_add_ps(vvdwsum,vvdw);
369 /* Calculate temporary vectorial force */
370 tx = _mm_mul_ps(fscal,dx00);
371 ty = _mm_mul_ps(fscal,dy00);
372 tz = _mm_mul_ps(fscal,dz00);
374 /* Update vectorial force */
375 fix0 = _mm_add_ps(fix0,tx);
376 fiy0 = _mm_add_ps(fiy0,ty);
377 fiz0 = _mm_add_ps(fiz0,tz);
379 fjx0 = _mm_add_ps(fjx0,tx);
380 fjy0 = _mm_add_ps(fjy0,ty);
381 fjz0 = _mm_add_ps(fjz0,tz);
383 /**************************
384 * CALCULATE INTERACTIONS *
385 **************************/
387 r11 = _mm_mul_ps(rsq11,rinv11);
389 /* EWALD ELECTROSTATICS */
391 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
392 ewrt = _mm_mul_ps(r11,ewtabscale);
393 ewitab = _mm_cvttps_epi32(ewrt);
394 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
395 ewitab = _mm_slli_epi32(ewitab,2);
396 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
397 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
398 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
399 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
400 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
401 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
402 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
403 velec = _mm_mul_ps(qq11,_mm_sub_ps(rinv11,velec));
404 felec = _mm_mul_ps(_mm_mul_ps(qq11,rinv11),_mm_sub_ps(rinvsq11,felec));
406 /* Update potential sum for this i atom from the interaction with this j atom. */
407 velecsum = _mm_add_ps(velecsum,velec);
411 /* Calculate temporary vectorial force */
412 tx = _mm_mul_ps(fscal,dx11);
413 ty = _mm_mul_ps(fscal,dy11);
414 tz = _mm_mul_ps(fscal,dz11);
416 /* Update vectorial force */
417 fix1 = _mm_add_ps(fix1,tx);
418 fiy1 = _mm_add_ps(fiy1,ty);
419 fiz1 = _mm_add_ps(fiz1,tz);
421 fjx1 = _mm_add_ps(fjx1,tx);
422 fjy1 = _mm_add_ps(fjy1,ty);
423 fjz1 = _mm_add_ps(fjz1,tz);
425 /**************************
426 * CALCULATE INTERACTIONS *
427 **************************/
429 r12 = _mm_mul_ps(rsq12,rinv12);
431 /* EWALD ELECTROSTATICS */
433 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
434 ewrt = _mm_mul_ps(r12,ewtabscale);
435 ewitab = _mm_cvttps_epi32(ewrt);
436 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
437 ewitab = _mm_slli_epi32(ewitab,2);
438 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
439 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
440 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
441 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
442 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
443 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
444 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
445 velec = _mm_mul_ps(qq12,_mm_sub_ps(rinv12,velec));
446 felec = _mm_mul_ps(_mm_mul_ps(qq12,rinv12),_mm_sub_ps(rinvsq12,felec));
448 /* Update potential sum for this i atom from the interaction with this j atom. */
449 velecsum = _mm_add_ps(velecsum,velec);
453 /* Calculate temporary vectorial force */
454 tx = _mm_mul_ps(fscal,dx12);
455 ty = _mm_mul_ps(fscal,dy12);
456 tz = _mm_mul_ps(fscal,dz12);
458 /* Update vectorial force */
459 fix1 = _mm_add_ps(fix1,tx);
460 fiy1 = _mm_add_ps(fiy1,ty);
461 fiz1 = _mm_add_ps(fiz1,tz);
463 fjx2 = _mm_add_ps(fjx2,tx);
464 fjy2 = _mm_add_ps(fjy2,ty);
465 fjz2 = _mm_add_ps(fjz2,tz);
467 /**************************
468 * CALCULATE INTERACTIONS *
469 **************************/
471 r13 = _mm_mul_ps(rsq13,rinv13);
473 /* EWALD ELECTROSTATICS */
475 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
476 ewrt = _mm_mul_ps(r13,ewtabscale);
477 ewitab = _mm_cvttps_epi32(ewrt);
478 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
479 ewitab = _mm_slli_epi32(ewitab,2);
480 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
481 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
482 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
483 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
484 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
485 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
486 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
487 velec = _mm_mul_ps(qq13,_mm_sub_ps(rinv13,velec));
488 felec = _mm_mul_ps(_mm_mul_ps(qq13,rinv13),_mm_sub_ps(rinvsq13,felec));
490 /* Update potential sum for this i atom from the interaction with this j atom. */
491 velecsum = _mm_add_ps(velecsum,velec);
495 /* Calculate temporary vectorial force */
496 tx = _mm_mul_ps(fscal,dx13);
497 ty = _mm_mul_ps(fscal,dy13);
498 tz = _mm_mul_ps(fscal,dz13);
500 /* Update vectorial force */
501 fix1 = _mm_add_ps(fix1,tx);
502 fiy1 = _mm_add_ps(fiy1,ty);
503 fiz1 = _mm_add_ps(fiz1,tz);
505 fjx3 = _mm_add_ps(fjx3,tx);
506 fjy3 = _mm_add_ps(fjy3,ty);
507 fjz3 = _mm_add_ps(fjz3,tz);
509 /**************************
510 * CALCULATE INTERACTIONS *
511 **************************/
513 r21 = _mm_mul_ps(rsq21,rinv21);
515 /* EWALD ELECTROSTATICS */
517 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
518 ewrt = _mm_mul_ps(r21,ewtabscale);
519 ewitab = _mm_cvttps_epi32(ewrt);
520 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
521 ewitab = _mm_slli_epi32(ewitab,2);
522 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
523 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
524 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
525 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
526 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
527 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
528 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
529 velec = _mm_mul_ps(qq21,_mm_sub_ps(rinv21,velec));
530 felec = _mm_mul_ps(_mm_mul_ps(qq21,rinv21),_mm_sub_ps(rinvsq21,felec));
532 /* Update potential sum for this i atom from the interaction with this j atom. */
533 velecsum = _mm_add_ps(velecsum,velec);
537 /* Calculate temporary vectorial force */
538 tx = _mm_mul_ps(fscal,dx21);
539 ty = _mm_mul_ps(fscal,dy21);
540 tz = _mm_mul_ps(fscal,dz21);
542 /* Update vectorial force */
543 fix2 = _mm_add_ps(fix2,tx);
544 fiy2 = _mm_add_ps(fiy2,ty);
545 fiz2 = _mm_add_ps(fiz2,tz);
547 fjx1 = _mm_add_ps(fjx1,tx);
548 fjy1 = _mm_add_ps(fjy1,ty);
549 fjz1 = _mm_add_ps(fjz1,tz);
551 /**************************
552 * CALCULATE INTERACTIONS *
553 **************************/
555 r22 = _mm_mul_ps(rsq22,rinv22);
557 /* EWALD ELECTROSTATICS */
559 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
560 ewrt = _mm_mul_ps(r22,ewtabscale);
561 ewitab = _mm_cvttps_epi32(ewrt);
562 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
563 ewitab = _mm_slli_epi32(ewitab,2);
564 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
565 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
566 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
567 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
568 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
569 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
570 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
571 velec = _mm_mul_ps(qq22,_mm_sub_ps(rinv22,velec));
572 felec = _mm_mul_ps(_mm_mul_ps(qq22,rinv22),_mm_sub_ps(rinvsq22,felec));
574 /* Update potential sum for this i atom from the interaction with this j atom. */
575 velecsum = _mm_add_ps(velecsum,velec);
579 /* Calculate temporary vectorial force */
580 tx = _mm_mul_ps(fscal,dx22);
581 ty = _mm_mul_ps(fscal,dy22);
582 tz = _mm_mul_ps(fscal,dz22);
584 /* Update vectorial force */
585 fix2 = _mm_add_ps(fix2,tx);
586 fiy2 = _mm_add_ps(fiy2,ty);
587 fiz2 = _mm_add_ps(fiz2,tz);
589 fjx2 = _mm_add_ps(fjx2,tx);
590 fjy2 = _mm_add_ps(fjy2,ty);
591 fjz2 = _mm_add_ps(fjz2,tz);
593 /**************************
594 * CALCULATE INTERACTIONS *
595 **************************/
597 r23 = _mm_mul_ps(rsq23,rinv23);
599 /* EWALD ELECTROSTATICS */
601 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
602 ewrt = _mm_mul_ps(r23,ewtabscale);
603 ewitab = _mm_cvttps_epi32(ewrt);
604 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
605 ewitab = _mm_slli_epi32(ewitab,2);
606 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
607 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
608 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
609 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
610 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
611 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
612 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
613 velec = _mm_mul_ps(qq23,_mm_sub_ps(rinv23,velec));
614 felec = _mm_mul_ps(_mm_mul_ps(qq23,rinv23),_mm_sub_ps(rinvsq23,felec));
616 /* Update potential sum for this i atom from the interaction with this j atom. */
617 velecsum = _mm_add_ps(velecsum,velec);
621 /* Calculate temporary vectorial force */
622 tx = _mm_mul_ps(fscal,dx23);
623 ty = _mm_mul_ps(fscal,dy23);
624 tz = _mm_mul_ps(fscal,dz23);
626 /* Update vectorial force */
627 fix2 = _mm_add_ps(fix2,tx);
628 fiy2 = _mm_add_ps(fiy2,ty);
629 fiz2 = _mm_add_ps(fiz2,tz);
631 fjx3 = _mm_add_ps(fjx3,tx);
632 fjy3 = _mm_add_ps(fjy3,ty);
633 fjz3 = _mm_add_ps(fjz3,tz);
635 /**************************
636 * CALCULATE INTERACTIONS *
637 **************************/
639 r31 = _mm_mul_ps(rsq31,rinv31);
641 /* EWALD ELECTROSTATICS */
643 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
644 ewrt = _mm_mul_ps(r31,ewtabscale);
645 ewitab = _mm_cvttps_epi32(ewrt);
646 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
647 ewitab = _mm_slli_epi32(ewitab,2);
648 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
649 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
650 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
651 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
652 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
653 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
654 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
655 velec = _mm_mul_ps(qq31,_mm_sub_ps(rinv31,velec));
656 felec = _mm_mul_ps(_mm_mul_ps(qq31,rinv31),_mm_sub_ps(rinvsq31,felec));
658 /* Update potential sum for this i atom from the interaction with this j atom. */
659 velecsum = _mm_add_ps(velecsum,velec);
663 /* Calculate temporary vectorial force */
664 tx = _mm_mul_ps(fscal,dx31);
665 ty = _mm_mul_ps(fscal,dy31);
666 tz = _mm_mul_ps(fscal,dz31);
668 /* Update vectorial force */
669 fix3 = _mm_add_ps(fix3,tx);
670 fiy3 = _mm_add_ps(fiy3,ty);
671 fiz3 = _mm_add_ps(fiz3,tz);
673 fjx1 = _mm_add_ps(fjx1,tx);
674 fjy1 = _mm_add_ps(fjy1,ty);
675 fjz1 = _mm_add_ps(fjz1,tz);
677 /**************************
678 * CALCULATE INTERACTIONS *
679 **************************/
681 r32 = _mm_mul_ps(rsq32,rinv32);
683 /* EWALD ELECTROSTATICS */
685 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
686 ewrt = _mm_mul_ps(r32,ewtabscale);
687 ewitab = _mm_cvttps_epi32(ewrt);
688 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
689 ewitab = _mm_slli_epi32(ewitab,2);
690 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
691 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
692 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
693 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
694 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
695 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
696 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
697 velec = _mm_mul_ps(qq32,_mm_sub_ps(rinv32,velec));
698 felec = _mm_mul_ps(_mm_mul_ps(qq32,rinv32),_mm_sub_ps(rinvsq32,felec));
700 /* Update potential sum for this i atom from the interaction with this j atom. */
701 velecsum = _mm_add_ps(velecsum,velec);
705 /* Calculate temporary vectorial force */
706 tx = _mm_mul_ps(fscal,dx32);
707 ty = _mm_mul_ps(fscal,dy32);
708 tz = _mm_mul_ps(fscal,dz32);
710 /* Update vectorial force */
711 fix3 = _mm_add_ps(fix3,tx);
712 fiy3 = _mm_add_ps(fiy3,ty);
713 fiz3 = _mm_add_ps(fiz3,tz);
715 fjx2 = _mm_add_ps(fjx2,tx);
716 fjy2 = _mm_add_ps(fjy2,ty);
717 fjz2 = _mm_add_ps(fjz2,tz);
719 /**************************
720 * CALCULATE INTERACTIONS *
721 **************************/
723 r33 = _mm_mul_ps(rsq33,rinv33);
725 /* EWALD ELECTROSTATICS */
727 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
728 ewrt = _mm_mul_ps(r33,ewtabscale);
729 ewitab = _mm_cvttps_epi32(ewrt);
730 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
731 ewitab = _mm_slli_epi32(ewitab,2);
732 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
733 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
734 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
735 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
736 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
737 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
738 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
739 velec = _mm_mul_ps(qq33,_mm_sub_ps(rinv33,velec));
740 felec = _mm_mul_ps(_mm_mul_ps(qq33,rinv33),_mm_sub_ps(rinvsq33,felec));
742 /* Update potential sum for this i atom from the interaction with this j atom. */
743 velecsum = _mm_add_ps(velecsum,velec);
747 /* Calculate temporary vectorial force */
748 tx = _mm_mul_ps(fscal,dx33);
749 ty = _mm_mul_ps(fscal,dy33);
750 tz = _mm_mul_ps(fscal,dz33);
752 /* Update vectorial force */
753 fix3 = _mm_add_ps(fix3,tx);
754 fiy3 = _mm_add_ps(fiy3,ty);
755 fiz3 = _mm_add_ps(fiz3,tz);
757 fjx3 = _mm_add_ps(fjx3,tx);
758 fjy3 = _mm_add_ps(fjy3,ty);
759 fjz3 = _mm_add_ps(fjz3,tz);
761 fjptrA = f+j_coord_offsetA;
762 fjptrB = f+j_coord_offsetB;
763 fjptrC = f+j_coord_offsetC;
764 fjptrD = f+j_coord_offsetD;
766 gmx_mm_decrement_4rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
767 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,
768 fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
770 /* Inner loop uses 428 flops */
776 /* Get j neighbor index, and coordinate index */
777 jnrlistA = jjnr[jidx];
778 jnrlistB = jjnr[jidx+1];
779 jnrlistC = jjnr[jidx+2];
780 jnrlistD = jjnr[jidx+3];
781 /* Sign of each element will be negative for non-real atoms.
782 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
783 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
785 dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
786 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
787 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
788 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
789 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
790 j_coord_offsetA = DIM*jnrA;
791 j_coord_offsetB = DIM*jnrB;
792 j_coord_offsetC = DIM*jnrC;
793 j_coord_offsetD = DIM*jnrD;
795 /* load j atom coordinates */
796 gmx_mm_load_4rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
797 x+j_coord_offsetC,x+j_coord_offsetD,
798 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,
799 &jy2,&jz2,&jx3,&jy3,&jz3);
801 /* Calculate displacement vector */
802 dx00 = _mm_sub_ps(ix0,jx0);
803 dy00 = _mm_sub_ps(iy0,jy0);
804 dz00 = _mm_sub_ps(iz0,jz0);
805 dx11 = _mm_sub_ps(ix1,jx1);
806 dy11 = _mm_sub_ps(iy1,jy1);
807 dz11 = _mm_sub_ps(iz1,jz1);
808 dx12 = _mm_sub_ps(ix1,jx2);
809 dy12 = _mm_sub_ps(iy1,jy2);
810 dz12 = _mm_sub_ps(iz1,jz2);
811 dx13 = _mm_sub_ps(ix1,jx3);
812 dy13 = _mm_sub_ps(iy1,jy3);
813 dz13 = _mm_sub_ps(iz1,jz3);
814 dx21 = _mm_sub_ps(ix2,jx1);
815 dy21 = _mm_sub_ps(iy2,jy1);
816 dz21 = _mm_sub_ps(iz2,jz1);
817 dx22 = _mm_sub_ps(ix2,jx2);
818 dy22 = _mm_sub_ps(iy2,jy2);
819 dz22 = _mm_sub_ps(iz2,jz2);
820 dx23 = _mm_sub_ps(ix2,jx3);
821 dy23 = _mm_sub_ps(iy2,jy3);
822 dz23 = _mm_sub_ps(iz2,jz3);
823 dx31 = _mm_sub_ps(ix3,jx1);
824 dy31 = _mm_sub_ps(iy3,jy1);
825 dz31 = _mm_sub_ps(iz3,jz1);
826 dx32 = _mm_sub_ps(ix3,jx2);
827 dy32 = _mm_sub_ps(iy3,jy2);
828 dz32 = _mm_sub_ps(iz3,jz2);
829 dx33 = _mm_sub_ps(ix3,jx3);
830 dy33 = _mm_sub_ps(iy3,jy3);
831 dz33 = _mm_sub_ps(iz3,jz3);
833 /* Calculate squared distance and things based on it */
834 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
835 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
836 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
837 rsq13 = gmx_mm_calc_rsq_ps(dx13,dy13,dz13);
838 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
839 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
840 rsq23 = gmx_mm_calc_rsq_ps(dx23,dy23,dz23);
841 rsq31 = gmx_mm_calc_rsq_ps(dx31,dy31,dz31);
842 rsq32 = gmx_mm_calc_rsq_ps(dx32,dy32,dz32);
843 rsq33 = gmx_mm_calc_rsq_ps(dx33,dy33,dz33);
845 rinv00 = sse2_invsqrt_f(rsq00);
846 rinv11 = sse2_invsqrt_f(rsq11);
847 rinv12 = sse2_invsqrt_f(rsq12);
848 rinv13 = sse2_invsqrt_f(rsq13);
849 rinv21 = sse2_invsqrt_f(rsq21);
850 rinv22 = sse2_invsqrt_f(rsq22);
851 rinv23 = sse2_invsqrt_f(rsq23);
852 rinv31 = sse2_invsqrt_f(rsq31);
853 rinv32 = sse2_invsqrt_f(rsq32);
854 rinv33 = sse2_invsqrt_f(rsq33);
856 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
857 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
858 rinvsq13 = _mm_mul_ps(rinv13,rinv13);
859 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
860 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
861 rinvsq23 = _mm_mul_ps(rinv23,rinv23);
862 rinvsq31 = _mm_mul_ps(rinv31,rinv31);
863 rinvsq32 = _mm_mul_ps(rinv32,rinv32);
864 rinvsq33 = _mm_mul_ps(rinv33,rinv33);
866 fjx0 = _mm_setzero_ps();
867 fjy0 = _mm_setzero_ps();
868 fjz0 = _mm_setzero_ps();
869 fjx1 = _mm_setzero_ps();
870 fjy1 = _mm_setzero_ps();
871 fjz1 = _mm_setzero_ps();
872 fjx2 = _mm_setzero_ps();
873 fjy2 = _mm_setzero_ps();
874 fjz2 = _mm_setzero_ps();
875 fjx3 = _mm_setzero_ps();
876 fjy3 = _mm_setzero_ps();
877 fjz3 = _mm_setzero_ps();
879 /**************************
880 * CALCULATE INTERACTIONS *
881 **************************/
883 r00 = _mm_mul_ps(rsq00,rinv00);
884 r00 = _mm_andnot_ps(dummy_mask,r00);
886 /* Calculate table index by multiplying r with table scale and truncate to integer */
887 rt = _mm_mul_ps(r00,vftabscale);
888 vfitab = _mm_cvttps_epi32(rt);
889 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
890 vfitab = _mm_slli_epi32(vfitab,3);
892 /* CUBIC SPLINE TABLE DISPERSION */
893 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
894 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
895 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
896 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
897 _MM_TRANSPOSE4_PS(Y,F,G,H);
898 Heps = _mm_mul_ps(vfeps,H);
899 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
900 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
901 vvdw6 = _mm_mul_ps(c6_00,VV);
902 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
903 fvdw6 = _mm_mul_ps(c6_00,FF);
905 /* CUBIC SPLINE TABLE REPULSION */
906 vfitab = _mm_add_epi32(vfitab,ifour);
907 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
908 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
909 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
910 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
911 _MM_TRANSPOSE4_PS(Y,F,G,H);
912 Heps = _mm_mul_ps(vfeps,H);
913 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
914 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
915 vvdw12 = _mm_mul_ps(c12_00,VV);
916 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
917 fvdw12 = _mm_mul_ps(c12_00,FF);
918 vvdw = _mm_add_ps(vvdw12,vvdw6);
919 fvdw = _mm_xor_ps(signbit,_mm_mul_ps(_mm_add_ps(fvdw6,fvdw12),_mm_mul_ps(vftabscale,rinv00)));
921 /* Update potential sum for this i atom from the interaction with this j atom. */
922 vvdw = _mm_andnot_ps(dummy_mask,vvdw);
923 vvdwsum = _mm_add_ps(vvdwsum,vvdw);
927 fscal = _mm_andnot_ps(dummy_mask,fscal);
929 /* Calculate temporary vectorial force */
930 tx = _mm_mul_ps(fscal,dx00);
931 ty = _mm_mul_ps(fscal,dy00);
932 tz = _mm_mul_ps(fscal,dz00);
934 /* Update vectorial force */
935 fix0 = _mm_add_ps(fix0,tx);
936 fiy0 = _mm_add_ps(fiy0,ty);
937 fiz0 = _mm_add_ps(fiz0,tz);
939 fjx0 = _mm_add_ps(fjx0,tx);
940 fjy0 = _mm_add_ps(fjy0,ty);
941 fjz0 = _mm_add_ps(fjz0,tz);
943 /**************************
944 * CALCULATE INTERACTIONS *
945 **************************/
947 r11 = _mm_mul_ps(rsq11,rinv11);
948 r11 = _mm_andnot_ps(dummy_mask,r11);
950 /* EWALD ELECTROSTATICS */
952 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
953 ewrt = _mm_mul_ps(r11,ewtabscale);
954 ewitab = _mm_cvttps_epi32(ewrt);
955 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
956 ewitab = _mm_slli_epi32(ewitab,2);
957 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
958 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
959 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
960 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
961 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
962 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
963 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
964 velec = _mm_mul_ps(qq11,_mm_sub_ps(rinv11,velec));
965 felec = _mm_mul_ps(_mm_mul_ps(qq11,rinv11),_mm_sub_ps(rinvsq11,felec));
967 /* Update potential sum for this i atom from the interaction with this j atom. */
968 velec = _mm_andnot_ps(dummy_mask,velec);
969 velecsum = _mm_add_ps(velecsum,velec);
973 fscal = _mm_andnot_ps(dummy_mask,fscal);
975 /* Calculate temporary vectorial force */
976 tx = _mm_mul_ps(fscal,dx11);
977 ty = _mm_mul_ps(fscal,dy11);
978 tz = _mm_mul_ps(fscal,dz11);
980 /* Update vectorial force */
981 fix1 = _mm_add_ps(fix1,tx);
982 fiy1 = _mm_add_ps(fiy1,ty);
983 fiz1 = _mm_add_ps(fiz1,tz);
985 fjx1 = _mm_add_ps(fjx1,tx);
986 fjy1 = _mm_add_ps(fjy1,ty);
987 fjz1 = _mm_add_ps(fjz1,tz);
989 /**************************
990 * CALCULATE INTERACTIONS *
991 **************************/
993 r12 = _mm_mul_ps(rsq12,rinv12);
994 r12 = _mm_andnot_ps(dummy_mask,r12);
996 /* EWALD ELECTROSTATICS */
998 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
999 ewrt = _mm_mul_ps(r12,ewtabscale);
1000 ewitab = _mm_cvttps_epi32(ewrt);
1001 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1002 ewitab = _mm_slli_epi32(ewitab,2);
1003 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1004 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1005 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1006 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1007 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1008 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1009 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1010 velec = _mm_mul_ps(qq12,_mm_sub_ps(rinv12,velec));
1011 felec = _mm_mul_ps(_mm_mul_ps(qq12,rinv12),_mm_sub_ps(rinvsq12,felec));
1013 /* Update potential sum for this i atom from the interaction with this j atom. */
1014 velec = _mm_andnot_ps(dummy_mask,velec);
1015 velecsum = _mm_add_ps(velecsum,velec);
1019 fscal = _mm_andnot_ps(dummy_mask,fscal);
1021 /* Calculate temporary vectorial force */
1022 tx = _mm_mul_ps(fscal,dx12);
1023 ty = _mm_mul_ps(fscal,dy12);
1024 tz = _mm_mul_ps(fscal,dz12);
1026 /* Update vectorial force */
1027 fix1 = _mm_add_ps(fix1,tx);
1028 fiy1 = _mm_add_ps(fiy1,ty);
1029 fiz1 = _mm_add_ps(fiz1,tz);
1031 fjx2 = _mm_add_ps(fjx2,tx);
1032 fjy2 = _mm_add_ps(fjy2,ty);
1033 fjz2 = _mm_add_ps(fjz2,tz);
1035 /**************************
1036 * CALCULATE INTERACTIONS *
1037 **************************/
1039 r13 = _mm_mul_ps(rsq13,rinv13);
1040 r13 = _mm_andnot_ps(dummy_mask,r13);
1042 /* EWALD ELECTROSTATICS */
1044 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1045 ewrt = _mm_mul_ps(r13,ewtabscale);
1046 ewitab = _mm_cvttps_epi32(ewrt);
1047 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1048 ewitab = _mm_slli_epi32(ewitab,2);
1049 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1050 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1051 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1052 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1053 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1054 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1055 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1056 velec = _mm_mul_ps(qq13,_mm_sub_ps(rinv13,velec));
1057 felec = _mm_mul_ps(_mm_mul_ps(qq13,rinv13),_mm_sub_ps(rinvsq13,felec));
1059 /* Update potential sum for this i atom from the interaction with this j atom. */
1060 velec = _mm_andnot_ps(dummy_mask,velec);
1061 velecsum = _mm_add_ps(velecsum,velec);
1065 fscal = _mm_andnot_ps(dummy_mask,fscal);
1067 /* Calculate temporary vectorial force */
1068 tx = _mm_mul_ps(fscal,dx13);
1069 ty = _mm_mul_ps(fscal,dy13);
1070 tz = _mm_mul_ps(fscal,dz13);
1072 /* Update vectorial force */
1073 fix1 = _mm_add_ps(fix1,tx);
1074 fiy1 = _mm_add_ps(fiy1,ty);
1075 fiz1 = _mm_add_ps(fiz1,tz);
1077 fjx3 = _mm_add_ps(fjx3,tx);
1078 fjy3 = _mm_add_ps(fjy3,ty);
1079 fjz3 = _mm_add_ps(fjz3,tz);
1081 /**************************
1082 * CALCULATE INTERACTIONS *
1083 **************************/
1085 r21 = _mm_mul_ps(rsq21,rinv21);
1086 r21 = _mm_andnot_ps(dummy_mask,r21);
1088 /* EWALD ELECTROSTATICS */
1090 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1091 ewrt = _mm_mul_ps(r21,ewtabscale);
1092 ewitab = _mm_cvttps_epi32(ewrt);
1093 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1094 ewitab = _mm_slli_epi32(ewitab,2);
1095 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1096 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1097 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1098 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1099 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1100 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1101 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1102 velec = _mm_mul_ps(qq21,_mm_sub_ps(rinv21,velec));
1103 felec = _mm_mul_ps(_mm_mul_ps(qq21,rinv21),_mm_sub_ps(rinvsq21,felec));
1105 /* Update potential sum for this i atom from the interaction with this j atom. */
1106 velec = _mm_andnot_ps(dummy_mask,velec);
1107 velecsum = _mm_add_ps(velecsum,velec);
1111 fscal = _mm_andnot_ps(dummy_mask,fscal);
1113 /* Calculate temporary vectorial force */
1114 tx = _mm_mul_ps(fscal,dx21);
1115 ty = _mm_mul_ps(fscal,dy21);
1116 tz = _mm_mul_ps(fscal,dz21);
1118 /* Update vectorial force */
1119 fix2 = _mm_add_ps(fix2,tx);
1120 fiy2 = _mm_add_ps(fiy2,ty);
1121 fiz2 = _mm_add_ps(fiz2,tz);
1123 fjx1 = _mm_add_ps(fjx1,tx);
1124 fjy1 = _mm_add_ps(fjy1,ty);
1125 fjz1 = _mm_add_ps(fjz1,tz);
1127 /**************************
1128 * CALCULATE INTERACTIONS *
1129 **************************/
1131 r22 = _mm_mul_ps(rsq22,rinv22);
1132 r22 = _mm_andnot_ps(dummy_mask,r22);
1134 /* EWALD ELECTROSTATICS */
1136 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1137 ewrt = _mm_mul_ps(r22,ewtabscale);
1138 ewitab = _mm_cvttps_epi32(ewrt);
1139 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1140 ewitab = _mm_slli_epi32(ewitab,2);
1141 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1142 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1143 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1144 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1145 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1146 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1147 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1148 velec = _mm_mul_ps(qq22,_mm_sub_ps(rinv22,velec));
1149 felec = _mm_mul_ps(_mm_mul_ps(qq22,rinv22),_mm_sub_ps(rinvsq22,felec));
1151 /* Update potential sum for this i atom from the interaction with this j atom. */
1152 velec = _mm_andnot_ps(dummy_mask,velec);
1153 velecsum = _mm_add_ps(velecsum,velec);
1157 fscal = _mm_andnot_ps(dummy_mask,fscal);
1159 /* Calculate temporary vectorial force */
1160 tx = _mm_mul_ps(fscal,dx22);
1161 ty = _mm_mul_ps(fscal,dy22);
1162 tz = _mm_mul_ps(fscal,dz22);
1164 /* Update vectorial force */
1165 fix2 = _mm_add_ps(fix2,tx);
1166 fiy2 = _mm_add_ps(fiy2,ty);
1167 fiz2 = _mm_add_ps(fiz2,tz);
1169 fjx2 = _mm_add_ps(fjx2,tx);
1170 fjy2 = _mm_add_ps(fjy2,ty);
1171 fjz2 = _mm_add_ps(fjz2,tz);
1173 /**************************
1174 * CALCULATE INTERACTIONS *
1175 **************************/
1177 r23 = _mm_mul_ps(rsq23,rinv23);
1178 r23 = _mm_andnot_ps(dummy_mask,r23);
1180 /* EWALD ELECTROSTATICS */
1182 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1183 ewrt = _mm_mul_ps(r23,ewtabscale);
1184 ewitab = _mm_cvttps_epi32(ewrt);
1185 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1186 ewitab = _mm_slli_epi32(ewitab,2);
1187 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1188 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1189 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1190 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1191 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1192 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1193 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1194 velec = _mm_mul_ps(qq23,_mm_sub_ps(rinv23,velec));
1195 felec = _mm_mul_ps(_mm_mul_ps(qq23,rinv23),_mm_sub_ps(rinvsq23,felec));
1197 /* Update potential sum for this i atom from the interaction with this j atom. */
1198 velec = _mm_andnot_ps(dummy_mask,velec);
1199 velecsum = _mm_add_ps(velecsum,velec);
1203 fscal = _mm_andnot_ps(dummy_mask,fscal);
1205 /* Calculate temporary vectorial force */
1206 tx = _mm_mul_ps(fscal,dx23);
1207 ty = _mm_mul_ps(fscal,dy23);
1208 tz = _mm_mul_ps(fscal,dz23);
1210 /* Update vectorial force */
1211 fix2 = _mm_add_ps(fix2,tx);
1212 fiy2 = _mm_add_ps(fiy2,ty);
1213 fiz2 = _mm_add_ps(fiz2,tz);
1215 fjx3 = _mm_add_ps(fjx3,tx);
1216 fjy3 = _mm_add_ps(fjy3,ty);
1217 fjz3 = _mm_add_ps(fjz3,tz);
1219 /**************************
1220 * CALCULATE INTERACTIONS *
1221 **************************/
1223 r31 = _mm_mul_ps(rsq31,rinv31);
1224 r31 = _mm_andnot_ps(dummy_mask,r31);
1226 /* EWALD ELECTROSTATICS */
1228 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1229 ewrt = _mm_mul_ps(r31,ewtabscale);
1230 ewitab = _mm_cvttps_epi32(ewrt);
1231 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1232 ewitab = _mm_slli_epi32(ewitab,2);
1233 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1234 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1235 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1236 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1237 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1238 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1239 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1240 velec = _mm_mul_ps(qq31,_mm_sub_ps(rinv31,velec));
1241 felec = _mm_mul_ps(_mm_mul_ps(qq31,rinv31),_mm_sub_ps(rinvsq31,felec));
1243 /* Update potential sum for this i atom from the interaction with this j atom. */
1244 velec = _mm_andnot_ps(dummy_mask,velec);
1245 velecsum = _mm_add_ps(velecsum,velec);
1249 fscal = _mm_andnot_ps(dummy_mask,fscal);
1251 /* Calculate temporary vectorial force */
1252 tx = _mm_mul_ps(fscal,dx31);
1253 ty = _mm_mul_ps(fscal,dy31);
1254 tz = _mm_mul_ps(fscal,dz31);
1256 /* Update vectorial force */
1257 fix3 = _mm_add_ps(fix3,tx);
1258 fiy3 = _mm_add_ps(fiy3,ty);
1259 fiz3 = _mm_add_ps(fiz3,tz);
1261 fjx1 = _mm_add_ps(fjx1,tx);
1262 fjy1 = _mm_add_ps(fjy1,ty);
1263 fjz1 = _mm_add_ps(fjz1,tz);
1265 /**************************
1266 * CALCULATE INTERACTIONS *
1267 **************************/
1269 r32 = _mm_mul_ps(rsq32,rinv32);
1270 r32 = _mm_andnot_ps(dummy_mask,r32);
1272 /* EWALD ELECTROSTATICS */
1274 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1275 ewrt = _mm_mul_ps(r32,ewtabscale);
1276 ewitab = _mm_cvttps_epi32(ewrt);
1277 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1278 ewitab = _mm_slli_epi32(ewitab,2);
1279 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1280 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1281 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1282 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1283 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1284 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1285 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1286 velec = _mm_mul_ps(qq32,_mm_sub_ps(rinv32,velec));
1287 felec = _mm_mul_ps(_mm_mul_ps(qq32,rinv32),_mm_sub_ps(rinvsq32,felec));
1289 /* Update potential sum for this i atom from the interaction with this j atom. */
1290 velec = _mm_andnot_ps(dummy_mask,velec);
1291 velecsum = _mm_add_ps(velecsum,velec);
1295 fscal = _mm_andnot_ps(dummy_mask,fscal);
1297 /* Calculate temporary vectorial force */
1298 tx = _mm_mul_ps(fscal,dx32);
1299 ty = _mm_mul_ps(fscal,dy32);
1300 tz = _mm_mul_ps(fscal,dz32);
1302 /* Update vectorial force */
1303 fix3 = _mm_add_ps(fix3,tx);
1304 fiy3 = _mm_add_ps(fiy3,ty);
1305 fiz3 = _mm_add_ps(fiz3,tz);
1307 fjx2 = _mm_add_ps(fjx2,tx);
1308 fjy2 = _mm_add_ps(fjy2,ty);
1309 fjz2 = _mm_add_ps(fjz2,tz);
1311 /**************************
1312 * CALCULATE INTERACTIONS *
1313 **************************/
1315 r33 = _mm_mul_ps(rsq33,rinv33);
1316 r33 = _mm_andnot_ps(dummy_mask,r33);
1318 /* EWALD ELECTROSTATICS */
1320 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1321 ewrt = _mm_mul_ps(r33,ewtabscale);
1322 ewitab = _mm_cvttps_epi32(ewrt);
1323 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1324 ewitab = _mm_slli_epi32(ewitab,2);
1325 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1326 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1327 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1328 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1329 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1330 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1331 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1332 velec = _mm_mul_ps(qq33,_mm_sub_ps(rinv33,velec));
1333 felec = _mm_mul_ps(_mm_mul_ps(qq33,rinv33),_mm_sub_ps(rinvsq33,felec));
1335 /* Update potential sum for this i atom from the interaction with this j atom. */
1336 velec = _mm_andnot_ps(dummy_mask,velec);
1337 velecsum = _mm_add_ps(velecsum,velec);
1341 fscal = _mm_andnot_ps(dummy_mask,fscal);
1343 /* Calculate temporary vectorial force */
1344 tx = _mm_mul_ps(fscal,dx33);
1345 ty = _mm_mul_ps(fscal,dy33);
1346 tz = _mm_mul_ps(fscal,dz33);
1348 /* Update vectorial force */
1349 fix3 = _mm_add_ps(fix3,tx);
1350 fiy3 = _mm_add_ps(fiy3,ty);
1351 fiz3 = _mm_add_ps(fiz3,tz);
1353 fjx3 = _mm_add_ps(fjx3,tx);
1354 fjy3 = _mm_add_ps(fjy3,ty);
1355 fjz3 = _mm_add_ps(fjz3,tz);
1357 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
1358 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
1359 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
1360 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
1362 gmx_mm_decrement_4rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
1363 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,
1364 fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
1366 /* Inner loop uses 438 flops */
1369 /* End of innermost loop */
1371 gmx_mm_update_iforce_4atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
1372 f+i_coord_offset,fshift+i_shift_offset);
1375 /* Update potential energies */
1376 gmx_mm_update_1pot_ps(velecsum,kernel_data->energygrp_elec+ggid);
1377 gmx_mm_update_1pot_ps(vvdwsum,kernel_data->energygrp_vdw+ggid);
1379 /* Increment number of inner iterations */
1380 inneriter += j_index_end - j_index_start;
1382 /* Outer loop uses 26 flops */
1385 /* Increment number of outer iterations */
1388 /* Update outer/inner flops */
1390 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W4W4_VF,outeriter*26 + inneriter*438);
1393 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwCSTab_GeomW4W4_F_sse2_single
1394 * Electrostatics interaction: Ewald
1395 * VdW interaction: CubicSplineTable
1396 * Geometry: Water4-Water4
1397 * Calculate force/pot: Force
1400 nb_kernel_ElecEw_VdwCSTab_GeomW4W4_F_sse2_single
1401 (t_nblist * gmx_restrict nlist,
1402 rvec * gmx_restrict xx,
1403 rvec * gmx_restrict ff,
1404 struct t_forcerec * gmx_restrict fr,
1405 t_mdatoms * gmx_restrict mdatoms,
1406 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
1407 t_nrnb * gmx_restrict nrnb)
1409 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
1410 * just 0 for non-waters.
1411 * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
1412 * jnr indices corresponding to data put in the four positions in the SIMD register.
1414 int i_shift_offset,i_coord_offset,outeriter,inneriter;
1415 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1416 int jnrA,jnrB,jnrC,jnrD;
1417 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
1418 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
1419 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
1420 real rcutoff_scalar;
1421 real *shiftvec,*fshift,*x,*f;
1422 real *fjptrA,*fjptrB,*fjptrC,*fjptrD;
1423 real scratch[4*DIM];
1424 __m128 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
1426 __m128 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
1428 __m128 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1430 __m128 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1432 __m128 ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
1433 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
1434 __m128 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
1435 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
1436 __m128 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1437 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
1438 __m128 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1439 int vdwjidx3A,vdwjidx3B,vdwjidx3C,vdwjidx3D;
1440 __m128 jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
1441 __m128 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
1442 __m128 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1443 __m128 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1444 __m128 dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
1445 __m128 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1446 __m128 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1447 __m128 dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
1448 __m128 dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
1449 __m128 dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
1450 __m128 dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
1451 __m128 velec,felec,velecsum,facel,crf,krf,krf2;
1454 __m128 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
1457 __m128 one_sixth = _mm_set1_ps(1.0/6.0);
1458 __m128 one_twelfth = _mm_set1_ps(1.0/12.0);
1460 __m128i ifour = _mm_set1_epi32(4);
1461 __m128 rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
1464 __m128 ewtabscale,eweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
1466 __m128 dummy_mask,cutoff_mask;
1467 __m128 signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
1468 __m128 one = _mm_set1_ps(1.0);
1469 __m128 two = _mm_set1_ps(2.0);
1475 jindex = nlist->jindex;
1477 shiftidx = nlist->shift;
1479 shiftvec = fr->shift_vec[0];
1480 fshift = fr->fshift[0];
1481 facel = _mm_set1_ps(fr->ic->epsfac);
1482 charge = mdatoms->chargeA;
1483 nvdwtype = fr->ntype;
1484 vdwparam = fr->nbfp;
1485 vdwtype = mdatoms->typeA;
1487 vftab = kernel_data->table_vdw->data;
1488 vftabscale = _mm_set1_ps(kernel_data->table_vdw->scale);
1490 sh_ewald = _mm_set1_ps(fr->ic->sh_ewald);
1491 ewtab = fr->ic->tabq_coul_F;
1492 ewtabscale = _mm_set1_ps(fr->ic->tabq_scale);
1493 ewtabhalfspace = _mm_set1_ps(0.5/fr->ic->tabq_scale);
1495 /* Setup water-specific parameters */
1496 inr = nlist->iinr[0];
1497 iq1 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
1498 iq2 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
1499 iq3 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+3]));
1500 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
1502 jq1 = _mm_set1_ps(charge[inr+1]);
1503 jq2 = _mm_set1_ps(charge[inr+2]);
1504 jq3 = _mm_set1_ps(charge[inr+3]);
1505 vdwjidx0A = 2*vdwtype[inr+0];
1506 c6_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A]);
1507 c12_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A+1]);
1508 qq11 = _mm_mul_ps(iq1,jq1);
1509 qq12 = _mm_mul_ps(iq1,jq2);
1510 qq13 = _mm_mul_ps(iq1,jq3);
1511 qq21 = _mm_mul_ps(iq2,jq1);
1512 qq22 = _mm_mul_ps(iq2,jq2);
1513 qq23 = _mm_mul_ps(iq2,jq3);
1514 qq31 = _mm_mul_ps(iq3,jq1);
1515 qq32 = _mm_mul_ps(iq3,jq2);
1516 qq33 = _mm_mul_ps(iq3,jq3);
1518 /* Avoid stupid compiler warnings */
1519 jnrA = jnrB = jnrC = jnrD = 0;
1520 j_coord_offsetA = 0;
1521 j_coord_offsetB = 0;
1522 j_coord_offsetC = 0;
1523 j_coord_offsetD = 0;
1528 for(iidx=0;iidx<4*DIM;iidx++)
1530 scratch[iidx] = 0.0;
1533 /* Start outer loop over neighborlists */
1534 for(iidx=0; iidx<nri; iidx++)
1536 /* Load shift vector for this list */
1537 i_shift_offset = DIM*shiftidx[iidx];
1539 /* Load limits for loop over neighbors */
1540 j_index_start = jindex[iidx];
1541 j_index_end = jindex[iidx+1];
1543 /* Get outer coordinate index */
1545 i_coord_offset = DIM*inr;
1547 /* Load i particle coords and add shift vector */
1548 gmx_mm_load_shift_and_4rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset,
1549 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
1551 fix0 = _mm_setzero_ps();
1552 fiy0 = _mm_setzero_ps();
1553 fiz0 = _mm_setzero_ps();
1554 fix1 = _mm_setzero_ps();
1555 fiy1 = _mm_setzero_ps();
1556 fiz1 = _mm_setzero_ps();
1557 fix2 = _mm_setzero_ps();
1558 fiy2 = _mm_setzero_ps();
1559 fiz2 = _mm_setzero_ps();
1560 fix3 = _mm_setzero_ps();
1561 fiy3 = _mm_setzero_ps();
1562 fiz3 = _mm_setzero_ps();
1564 /* Start inner kernel loop */
1565 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
1568 /* Get j neighbor index, and coordinate index */
1570 jnrB = jjnr[jidx+1];
1571 jnrC = jjnr[jidx+2];
1572 jnrD = jjnr[jidx+3];
1573 j_coord_offsetA = DIM*jnrA;
1574 j_coord_offsetB = DIM*jnrB;
1575 j_coord_offsetC = DIM*jnrC;
1576 j_coord_offsetD = DIM*jnrD;
1578 /* load j atom coordinates */
1579 gmx_mm_load_4rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1580 x+j_coord_offsetC,x+j_coord_offsetD,
1581 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,
1582 &jy2,&jz2,&jx3,&jy3,&jz3);
1584 /* Calculate displacement vector */
1585 dx00 = _mm_sub_ps(ix0,jx0);
1586 dy00 = _mm_sub_ps(iy0,jy0);
1587 dz00 = _mm_sub_ps(iz0,jz0);
1588 dx11 = _mm_sub_ps(ix1,jx1);
1589 dy11 = _mm_sub_ps(iy1,jy1);
1590 dz11 = _mm_sub_ps(iz1,jz1);
1591 dx12 = _mm_sub_ps(ix1,jx2);
1592 dy12 = _mm_sub_ps(iy1,jy2);
1593 dz12 = _mm_sub_ps(iz1,jz2);
1594 dx13 = _mm_sub_ps(ix1,jx3);
1595 dy13 = _mm_sub_ps(iy1,jy3);
1596 dz13 = _mm_sub_ps(iz1,jz3);
1597 dx21 = _mm_sub_ps(ix2,jx1);
1598 dy21 = _mm_sub_ps(iy2,jy1);
1599 dz21 = _mm_sub_ps(iz2,jz1);
1600 dx22 = _mm_sub_ps(ix2,jx2);
1601 dy22 = _mm_sub_ps(iy2,jy2);
1602 dz22 = _mm_sub_ps(iz2,jz2);
1603 dx23 = _mm_sub_ps(ix2,jx3);
1604 dy23 = _mm_sub_ps(iy2,jy3);
1605 dz23 = _mm_sub_ps(iz2,jz3);
1606 dx31 = _mm_sub_ps(ix3,jx1);
1607 dy31 = _mm_sub_ps(iy3,jy1);
1608 dz31 = _mm_sub_ps(iz3,jz1);
1609 dx32 = _mm_sub_ps(ix3,jx2);
1610 dy32 = _mm_sub_ps(iy3,jy2);
1611 dz32 = _mm_sub_ps(iz3,jz2);
1612 dx33 = _mm_sub_ps(ix3,jx3);
1613 dy33 = _mm_sub_ps(iy3,jy3);
1614 dz33 = _mm_sub_ps(iz3,jz3);
1616 /* Calculate squared distance and things based on it */
1617 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
1618 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1619 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1620 rsq13 = gmx_mm_calc_rsq_ps(dx13,dy13,dz13);
1621 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1622 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1623 rsq23 = gmx_mm_calc_rsq_ps(dx23,dy23,dz23);
1624 rsq31 = gmx_mm_calc_rsq_ps(dx31,dy31,dz31);
1625 rsq32 = gmx_mm_calc_rsq_ps(dx32,dy32,dz32);
1626 rsq33 = gmx_mm_calc_rsq_ps(dx33,dy33,dz33);
1628 rinv00 = sse2_invsqrt_f(rsq00);
1629 rinv11 = sse2_invsqrt_f(rsq11);
1630 rinv12 = sse2_invsqrt_f(rsq12);
1631 rinv13 = sse2_invsqrt_f(rsq13);
1632 rinv21 = sse2_invsqrt_f(rsq21);
1633 rinv22 = sse2_invsqrt_f(rsq22);
1634 rinv23 = sse2_invsqrt_f(rsq23);
1635 rinv31 = sse2_invsqrt_f(rsq31);
1636 rinv32 = sse2_invsqrt_f(rsq32);
1637 rinv33 = sse2_invsqrt_f(rsq33);
1639 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
1640 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
1641 rinvsq13 = _mm_mul_ps(rinv13,rinv13);
1642 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
1643 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
1644 rinvsq23 = _mm_mul_ps(rinv23,rinv23);
1645 rinvsq31 = _mm_mul_ps(rinv31,rinv31);
1646 rinvsq32 = _mm_mul_ps(rinv32,rinv32);
1647 rinvsq33 = _mm_mul_ps(rinv33,rinv33);
1649 fjx0 = _mm_setzero_ps();
1650 fjy0 = _mm_setzero_ps();
1651 fjz0 = _mm_setzero_ps();
1652 fjx1 = _mm_setzero_ps();
1653 fjy1 = _mm_setzero_ps();
1654 fjz1 = _mm_setzero_ps();
1655 fjx2 = _mm_setzero_ps();
1656 fjy2 = _mm_setzero_ps();
1657 fjz2 = _mm_setzero_ps();
1658 fjx3 = _mm_setzero_ps();
1659 fjy3 = _mm_setzero_ps();
1660 fjz3 = _mm_setzero_ps();
1662 /**************************
1663 * CALCULATE INTERACTIONS *
1664 **************************/
1666 r00 = _mm_mul_ps(rsq00,rinv00);
1668 /* Calculate table index by multiplying r with table scale and truncate to integer */
1669 rt = _mm_mul_ps(r00,vftabscale);
1670 vfitab = _mm_cvttps_epi32(rt);
1671 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
1672 vfitab = _mm_slli_epi32(vfitab,3);
1674 /* CUBIC SPLINE TABLE DISPERSION */
1675 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1676 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1677 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1678 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1679 _MM_TRANSPOSE4_PS(Y,F,G,H);
1680 Heps = _mm_mul_ps(vfeps,H);
1681 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1682 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1683 fvdw6 = _mm_mul_ps(c6_00,FF);
1685 /* CUBIC SPLINE TABLE REPULSION */
1686 vfitab = _mm_add_epi32(vfitab,ifour);
1687 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1688 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1689 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1690 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1691 _MM_TRANSPOSE4_PS(Y,F,G,H);
1692 Heps = _mm_mul_ps(vfeps,H);
1693 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1694 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1695 fvdw12 = _mm_mul_ps(c12_00,FF);
1696 fvdw = _mm_xor_ps(signbit,_mm_mul_ps(_mm_add_ps(fvdw6,fvdw12),_mm_mul_ps(vftabscale,rinv00)));
1700 /* Calculate temporary vectorial force */
1701 tx = _mm_mul_ps(fscal,dx00);
1702 ty = _mm_mul_ps(fscal,dy00);
1703 tz = _mm_mul_ps(fscal,dz00);
1705 /* Update vectorial force */
1706 fix0 = _mm_add_ps(fix0,tx);
1707 fiy0 = _mm_add_ps(fiy0,ty);
1708 fiz0 = _mm_add_ps(fiz0,tz);
1710 fjx0 = _mm_add_ps(fjx0,tx);
1711 fjy0 = _mm_add_ps(fjy0,ty);
1712 fjz0 = _mm_add_ps(fjz0,tz);
1714 /**************************
1715 * CALCULATE INTERACTIONS *
1716 **************************/
1718 r11 = _mm_mul_ps(rsq11,rinv11);
1720 /* EWALD ELECTROSTATICS */
1722 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1723 ewrt = _mm_mul_ps(r11,ewtabscale);
1724 ewitab = _mm_cvttps_epi32(ewrt);
1725 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1726 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1727 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1729 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1730 felec = _mm_mul_ps(_mm_mul_ps(qq11,rinv11),_mm_sub_ps(rinvsq11,felec));
1734 /* Calculate temporary vectorial force */
1735 tx = _mm_mul_ps(fscal,dx11);
1736 ty = _mm_mul_ps(fscal,dy11);
1737 tz = _mm_mul_ps(fscal,dz11);
1739 /* Update vectorial force */
1740 fix1 = _mm_add_ps(fix1,tx);
1741 fiy1 = _mm_add_ps(fiy1,ty);
1742 fiz1 = _mm_add_ps(fiz1,tz);
1744 fjx1 = _mm_add_ps(fjx1,tx);
1745 fjy1 = _mm_add_ps(fjy1,ty);
1746 fjz1 = _mm_add_ps(fjz1,tz);
1748 /**************************
1749 * CALCULATE INTERACTIONS *
1750 **************************/
1752 r12 = _mm_mul_ps(rsq12,rinv12);
1754 /* EWALD ELECTROSTATICS */
1756 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1757 ewrt = _mm_mul_ps(r12,ewtabscale);
1758 ewitab = _mm_cvttps_epi32(ewrt);
1759 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1760 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1761 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1763 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1764 felec = _mm_mul_ps(_mm_mul_ps(qq12,rinv12),_mm_sub_ps(rinvsq12,felec));
1768 /* Calculate temporary vectorial force */
1769 tx = _mm_mul_ps(fscal,dx12);
1770 ty = _mm_mul_ps(fscal,dy12);
1771 tz = _mm_mul_ps(fscal,dz12);
1773 /* Update vectorial force */
1774 fix1 = _mm_add_ps(fix1,tx);
1775 fiy1 = _mm_add_ps(fiy1,ty);
1776 fiz1 = _mm_add_ps(fiz1,tz);
1778 fjx2 = _mm_add_ps(fjx2,tx);
1779 fjy2 = _mm_add_ps(fjy2,ty);
1780 fjz2 = _mm_add_ps(fjz2,tz);
1782 /**************************
1783 * CALCULATE INTERACTIONS *
1784 **************************/
1786 r13 = _mm_mul_ps(rsq13,rinv13);
1788 /* EWALD ELECTROSTATICS */
1790 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1791 ewrt = _mm_mul_ps(r13,ewtabscale);
1792 ewitab = _mm_cvttps_epi32(ewrt);
1793 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1794 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1795 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1797 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1798 felec = _mm_mul_ps(_mm_mul_ps(qq13,rinv13),_mm_sub_ps(rinvsq13,felec));
1802 /* Calculate temporary vectorial force */
1803 tx = _mm_mul_ps(fscal,dx13);
1804 ty = _mm_mul_ps(fscal,dy13);
1805 tz = _mm_mul_ps(fscal,dz13);
1807 /* Update vectorial force */
1808 fix1 = _mm_add_ps(fix1,tx);
1809 fiy1 = _mm_add_ps(fiy1,ty);
1810 fiz1 = _mm_add_ps(fiz1,tz);
1812 fjx3 = _mm_add_ps(fjx3,tx);
1813 fjy3 = _mm_add_ps(fjy3,ty);
1814 fjz3 = _mm_add_ps(fjz3,tz);
1816 /**************************
1817 * CALCULATE INTERACTIONS *
1818 **************************/
1820 r21 = _mm_mul_ps(rsq21,rinv21);
1822 /* EWALD ELECTROSTATICS */
1824 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1825 ewrt = _mm_mul_ps(r21,ewtabscale);
1826 ewitab = _mm_cvttps_epi32(ewrt);
1827 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1828 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1829 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1831 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1832 felec = _mm_mul_ps(_mm_mul_ps(qq21,rinv21),_mm_sub_ps(rinvsq21,felec));
1836 /* Calculate temporary vectorial force */
1837 tx = _mm_mul_ps(fscal,dx21);
1838 ty = _mm_mul_ps(fscal,dy21);
1839 tz = _mm_mul_ps(fscal,dz21);
1841 /* Update vectorial force */
1842 fix2 = _mm_add_ps(fix2,tx);
1843 fiy2 = _mm_add_ps(fiy2,ty);
1844 fiz2 = _mm_add_ps(fiz2,tz);
1846 fjx1 = _mm_add_ps(fjx1,tx);
1847 fjy1 = _mm_add_ps(fjy1,ty);
1848 fjz1 = _mm_add_ps(fjz1,tz);
1850 /**************************
1851 * CALCULATE INTERACTIONS *
1852 **************************/
1854 r22 = _mm_mul_ps(rsq22,rinv22);
1856 /* EWALD ELECTROSTATICS */
1858 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1859 ewrt = _mm_mul_ps(r22,ewtabscale);
1860 ewitab = _mm_cvttps_epi32(ewrt);
1861 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1862 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1863 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1865 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1866 felec = _mm_mul_ps(_mm_mul_ps(qq22,rinv22),_mm_sub_ps(rinvsq22,felec));
1870 /* Calculate temporary vectorial force */
1871 tx = _mm_mul_ps(fscal,dx22);
1872 ty = _mm_mul_ps(fscal,dy22);
1873 tz = _mm_mul_ps(fscal,dz22);
1875 /* Update vectorial force */
1876 fix2 = _mm_add_ps(fix2,tx);
1877 fiy2 = _mm_add_ps(fiy2,ty);
1878 fiz2 = _mm_add_ps(fiz2,tz);
1880 fjx2 = _mm_add_ps(fjx2,tx);
1881 fjy2 = _mm_add_ps(fjy2,ty);
1882 fjz2 = _mm_add_ps(fjz2,tz);
1884 /**************************
1885 * CALCULATE INTERACTIONS *
1886 **************************/
1888 r23 = _mm_mul_ps(rsq23,rinv23);
1890 /* EWALD ELECTROSTATICS */
1892 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1893 ewrt = _mm_mul_ps(r23,ewtabscale);
1894 ewitab = _mm_cvttps_epi32(ewrt);
1895 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1896 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1897 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1899 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1900 felec = _mm_mul_ps(_mm_mul_ps(qq23,rinv23),_mm_sub_ps(rinvsq23,felec));
1904 /* Calculate temporary vectorial force */
1905 tx = _mm_mul_ps(fscal,dx23);
1906 ty = _mm_mul_ps(fscal,dy23);
1907 tz = _mm_mul_ps(fscal,dz23);
1909 /* Update vectorial force */
1910 fix2 = _mm_add_ps(fix2,tx);
1911 fiy2 = _mm_add_ps(fiy2,ty);
1912 fiz2 = _mm_add_ps(fiz2,tz);
1914 fjx3 = _mm_add_ps(fjx3,tx);
1915 fjy3 = _mm_add_ps(fjy3,ty);
1916 fjz3 = _mm_add_ps(fjz3,tz);
1918 /**************************
1919 * CALCULATE INTERACTIONS *
1920 **************************/
1922 r31 = _mm_mul_ps(rsq31,rinv31);
1924 /* EWALD ELECTROSTATICS */
1926 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1927 ewrt = _mm_mul_ps(r31,ewtabscale);
1928 ewitab = _mm_cvttps_epi32(ewrt);
1929 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1930 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1931 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1933 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1934 felec = _mm_mul_ps(_mm_mul_ps(qq31,rinv31),_mm_sub_ps(rinvsq31,felec));
1938 /* Calculate temporary vectorial force */
1939 tx = _mm_mul_ps(fscal,dx31);
1940 ty = _mm_mul_ps(fscal,dy31);
1941 tz = _mm_mul_ps(fscal,dz31);
1943 /* Update vectorial force */
1944 fix3 = _mm_add_ps(fix3,tx);
1945 fiy3 = _mm_add_ps(fiy3,ty);
1946 fiz3 = _mm_add_ps(fiz3,tz);
1948 fjx1 = _mm_add_ps(fjx1,tx);
1949 fjy1 = _mm_add_ps(fjy1,ty);
1950 fjz1 = _mm_add_ps(fjz1,tz);
1952 /**************************
1953 * CALCULATE INTERACTIONS *
1954 **************************/
1956 r32 = _mm_mul_ps(rsq32,rinv32);
1958 /* EWALD ELECTROSTATICS */
1960 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1961 ewrt = _mm_mul_ps(r32,ewtabscale);
1962 ewitab = _mm_cvttps_epi32(ewrt);
1963 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1964 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1965 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1967 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1968 felec = _mm_mul_ps(_mm_mul_ps(qq32,rinv32),_mm_sub_ps(rinvsq32,felec));
1972 /* Calculate temporary vectorial force */
1973 tx = _mm_mul_ps(fscal,dx32);
1974 ty = _mm_mul_ps(fscal,dy32);
1975 tz = _mm_mul_ps(fscal,dz32);
1977 /* Update vectorial force */
1978 fix3 = _mm_add_ps(fix3,tx);
1979 fiy3 = _mm_add_ps(fiy3,ty);
1980 fiz3 = _mm_add_ps(fiz3,tz);
1982 fjx2 = _mm_add_ps(fjx2,tx);
1983 fjy2 = _mm_add_ps(fjy2,ty);
1984 fjz2 = _mm_add_ps(fjz2,tz);
1986 /**************************
1987 * CALCULATE INTERACTIONS *
1988 **************************/
1990 r33 = _mm_mul_ps(rsq33,rinv33);
1992 /* EWALD ELECTROSTATICS */
1994 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1995 ewrt = _mm_mul_ps(r33,ewtabscale);
1996 ewitab = _mm_cvttps_epi32(ewrt);
1997 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1998 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1999 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2001 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2002 felec = _mm_mul_ps(_mm_mul_ps(qq33,rinv33),_mm_sub_ps(rinvsq33,felec));
2006 /* Calculate temporary vectorial force */
2007 tx = _mm_mul_ps(fscal,dx33);
2008 ty = _mm_mul_ps(fscal,dy33);
2009 tz = _mm_mul_ps(fscal,dz33);
2011 /* Update vectorial force */
2012 fix3 = _mm_add_ps(fix3,tx);
2013 fiy3 = _mm_add_ps(fiy3,ty);
2014 fiz3 = _mm_add_ps(fiz3,tz);
2016 fjx3 = _mm_add_ps(fjx3,tx);
2017 fjy3 = _mm_add_ps(fjy3,ty);
2018 fjz3 = _mm_add_ps(fjz3,tz);
2020 fjptrA = f+j_coord_offsetA;
2021 fjptrB = f+j_coord_offsetB;
2022 fjptrC = f+j_coord_offsetC;
2023 fjptrD = f+j_coord_offsetD;
2025 gmx_mm_decrement_4rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
2026 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,
2027 fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
2029 /* Inner loop uses 375 flops */
2032 if(jidx<j_index_end)
2035 /* Get j neighbor index, and coordinate index */
2036 jnrlistA = jjnr[jidx];
2037 jnrlistB = jjnr[jidx+1];
2038 jnrlistC = jjnr[jidx+2];
2039 jnrlistD = jjnr[jidx+3];
2040 /* Sign of each element will be negative for non-real atoms.
2041 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
2042 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
2044 dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
2045 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
2046 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
2047 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
2048 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
2049 j_coord_offsetA = DIM*jnrA;
2050 j_coord_offsetB = DIM*jnrB;
2051 j_coord_offsetC = DIM*jnrC;
2052 j_coord_offsetD = DIM*jnrD;
2054 /* load j atom coordinates */
2055 gmx_mm_load_4rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
2056 x+j_coord_offsetC,x+j_coord_offsetD,
2057 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,
2058 &jy2,&jz2,&jx3,&jy3,&jz3);
2060 /* Calculate displacement vector */
2061 dx00 = _mm_sub_ps(ix0,jx0);
2062 dy00 = _mm_sub_ps(iy0,jy0);
2063 dz00 = _mm_sub_ps(iz0,jz0);
2064 dx11 = _mm_sub_ps(ix1,jx1);
2065 dy11 = _mm_sub_ps(iy1,jy1);
2066 dz11 = _mm_sub_ps(iz1,jz1);
2067 dx12 = _mm_sub_ps(ix1,jx2);
2068 dy12 = _mm_sub_ps(iy1,jy2);
2069 dz12 = _mm_sub_ps(iz1,jz2);
2070 dx13 = _mm_sub_ps(ix1,jx3);
2071 dy13 = _mm_sub_ps(iy1,jy3);
2072 dz13 = _mm_sub_ps(iz1,jz3);
2073 dx21 = _mm_sub_ps(ix2,jx1);
2074 dy21 = _mm_sub_ps(iy2,jy1);
2075 dz21 = _mm_sub_ps(iz2,jz1);
2076 dx22 = _mm_sub_ps(ix2,jx2);
2077 dy22 = _mm_sub_ps(iy2,jy2);
2078 dz22 = _mm_sub_ps(iz2,jz2);
2079 dx23 = _mm_sub_ps(ix2,jx3);
2080 dy23 = _mm_sub_ps(iy2,jy3);
2081 dz23 = _mm_sub_ps(iz2,jz3);
2082 dx31 = _mm_sub_ps(ix3,jx1);
2083 dy31 = _mm_sub_ps(iy3,jy1);
2084 dz31 = _mm_sub_ps(iz3,jz1);
2085 dx32 = _mm_sub_ps(ix3,jx2);
2086 dy32 = _mm_sub_ps(iy3,jy2);
2087 dz32 = _mm_sub_ps(iz3,jz2);
2088 dx33 = _mm_sub_ps(ix3,jx3);
2089 dy33 = _mm_sub_ps(iy3,jy3);
2090 dz33 = _mm_sub_ps(iz3,jz3);
2092 /* Calculate squared distance and things based on it */
2093 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
2094 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
2095 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
2096 rsq13 = gmx_mm_calc_rsq_ps(dx13,dy13,dz13);
2097 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
2098 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
2099 rsq23 = gmx_mm_calc_rsq_ps(dx23,dy23,dz23);
2100 rsq31 = gmx_mm_calc_rsq_ps(dx31,dy31,dz31);
2101 rsq32 = gmx_mm_calc_rsq_ps(dx32,dy32,dz32);
2102 rsq33 = gmx_mm_calc_rsq_ps(dx33,dy33,dz33);
2104 rinv00 = sse2_invsqrt_f(rsq00);
2105 rinv11 = sse2_invsqrt_f(rsq11);
2106 rinv12 = sse2_invsqrt_f(rsq12);
2107 rinv13 = sse2_invsqrt_f(rsq13);
2108 rinv21 = sse2_invsqrt_f(rsq21);
2109 rinv22 = sse2_invsqrt_f(rsq22);
2110 rinv23 = sse2_invsqrt_f(rsq23);
2111 rinv31 = sse2_invsqrt_f(rsq31);
2112 rinv32 = sse2_invsqrt_f(rsq32);
2113 rinv33 = sse2_invsqrt_f(rsq33);
2115 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
2116 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
2117 rinvsq13 = _mm_mul_ps(rinv13,rinv13);
2118 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
2119 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
2120 rinvsq23 = _mm_mul_ps(rinv23,rinv23);
2121 rinvsq31 = _mm_mul_ps(rinv31,rinv31);
2122 rinvsq32 = _mm_mul_ps(rinv32,rinv32);
2123 rinvsq33 = _mm_mul_ps(rinv33,rinv33);
2125 fjx0 = _mm_setzero_ps();
2126 fjy0 = _mm_setzero_ps();
2127 fjz0 = _mm_setzero_ps();
2128 fjx1 = _mm_setzero_ps();
2129 fjy1 = _mm_setzero_ps();
2130 fjz1 = _mm_setzero_ps();
2131 fjx2 = _mm_setzero_ps();
2132 fjy2 = _mm_setzero_ps();
2133 fjz2 = _mm_setzero_ps();
2134 fjx3 = _mm_setzero_ps();
2135 fjy3 = _mm_setzero_ps();
2136 fjz3 = _mm_setzero_ps();
2138 /**************************
2139 * CALCULATE INTERACTIONS *
2140 **************************/
2142 r00 = _mm_mul_ps(rsq00,rinv00);
2143 r00 = _mm_andnot_ps(dummy_mask,r00);
2145 /* Calculate table index by multiplying r with table scale and truncate to integer */
2146 rt = _mm_mul_ps(r00,vftabscale);
2147 vfitab = _mm_cvttps_epi32(rt);
2148 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
2149 vfitab = _mm_slli_epi32(vfitab,3);
2151 /* CUBIC SPLINE TABLE DISPERSION */
2152 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
2153 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
2154 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
2155 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
2156 _MM_TRANSPOSE4_PS(Y,F,G,H);
2157 Heps = _mm_mul_ps(vfeps,H);
2158 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
2159 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
2160 fvdw6 = _mm_mul_ps(c6_00,FF);
2162 /* CUBIC SPLINE TABLE REPULSION */
2163 vfitab = _mm_add_epi32(vfitab,ifour);
2164 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
2165 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
2166 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
2167 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
2168 _MM_TRANSPOSE4_PS(Y,F,G,H);
2169 Heps = _mm_mul_ps(vfeps,H);
2170 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
2171 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
2172 fvdw12 = _mm_mul_ps(c12_00,FF);
2173 fvdw = _mm_xor_ps(signbit,_mm_mul_ps(_mm_add_ps(fvdw6,fvdw12),_mm_mul_ps(vftabscale,rinv00)));
2177 fscal = _mm_andnot_ps(dummy_mask,fscal);
2179 /* Calculate temporary vectorial force */
2180 tx = _mm_mul_ps(fscal,dx00);
2181 ty = _mm_mul_ps(fscal,dy00);
2182 tz = _mm_mul_ps(fscal,dz00);
2184 /* Update vectorial force */
2185 fix0 = _mm_add_ps(fix0,tx);
2186 fiy0 = _mm_add_ps(fiy0,ty);
2187 fiz0 = _mm_add_ps(fiz0,tz);
2189 fjx0 = _mm_add_ps(fjx0,tx);
2190 fjy0 = _mm_add_ps(fjy0,ty);
2191 fjz0 = _mm_add_ps(fjz0,tz);
2193 /**************************
2194 * CALCULATE INTERACTIONS *
2195 **************************/
2197 r11 = _mm_mul_ps(rsq11,rinv11);
2198 r11 = _mm_andnot_ps(dummy_mask,r11);
2200 /* EWALD ELECTROSTATICS */
2202 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2203 ewrt = _mm_mul_ps(r11,ewtabscale);
2204 ewitab = _mm_cvttps_epi32(ewrt);
2205 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2206 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2207 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2209 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2210 felec = _mm_mul_ps(_mm_mul_ps(qq11,rinv11),_mm_sub_ps(rinvsq11,felec));
2214 fscal = _mm_andnot_ps(dummy_mask,fscal);
2216 /* Calculate temporary vectorial force */
2217 tx = _mm_mul_ps(fscal,dx11);
2218 ty = _mm_mul_ps(fscal,dy11);
2219 tz = _mm_mul_ps(fscal,dz11);
2221 /* Update vectorial force */
2222 fix1 = _mm_add_ps(fix1,tx);
2223 fiy1 = _mm_add_ps(fiy1,ty);
2224 fiz1 = _mm_add_ps(fiz1,tz);
2226 fjx1 = _mm_add_ps(fjx1,tx);
2227 fjy1 = _mm_add_ps(fjy1,ty);
2228 fjz1 = _mm_add_ps(fjz1,tz);
2230 /**************************
2231 * CALCULATE INTERACTIONS *
2232 **************************/
2234 r12 = _mm_mul_ps(rsq12,rinv12);
2235 r12 = _mm_andnot_ps(dummy_mask,r12);
2237 /* EWALD ELECTROSTATICS */
2239 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2240 ewrt = _mm_mul_ps(r12,ewtabscale);
2241 ewitab = _mm_cvttps_epi32(ewrt);
2242 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2243 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2244 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2246 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2247 felec = _mm_mul_ps(_mm_mul_ps(qq12,rinv12),_mm_sub_ps(rinvsq12,felec));
2251 fscal = _mm_andnot_ps(dummy_mask,fscal);
2253 /* Calculate temporary vectorial force */
2254 tx = _mm_mul_ps(fscal,dx12);
2255 ty = _mm_mul_ps(fscal,dy12);
2256 tz = _mm_mul_ps(fscal,dz12);
2258 /* Update vectorial force */
2259 fix1 = _mm_add_ps(fix1,tx);
2260 fiy1 = _mm_add_ps(fiy1,ty);
2261 fiz1 = _mm_add_ps(fiz1,tz);
2263 fjx2 = _mm_add_ps(fjx2,tx);
2264 fjy2 = _mm_add_ps(fjy2,ty);
2265 fjz2 = _mm_add_ps(fjz2,tz);
2267 /**************************
2268 * CALCULATE INTERACTIONS *
2269 **************************/
2271 r13 = _mm_mul_ps(rsq13,rinv13);
2272 r13 = _mm_andnot_ps(dummy_mask,r13);
2274 /* EWALD ELECTROSTATICS */
2276 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2277 ewrt = _mm_mul_ps(r13,ewtabscale);
2278 ewitab = _mm_cvttps_epi32(ewrt);
2279 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2280 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2281 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2283 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2284 felec = _mm_mul_ps(_mm_mul_ps(qq13,rinv13),_mm_sub_ps(rinvsq13,felec));
2288 fscal = _mm_andnot_ps(dummy_mask,fscal);
2290 /* Calculate temporary vectorial force */
2291 tx = _mm_mul_ps(fscal,dx13);
2292 ty = _mm_mul_ps(fscal,dy13);
2293 tz = _mm_mul_ps(fscal,dz13);
2295 /* Update vectorial force */
2296 fix1 = _mm_add_ps(fix1,tx);
2297 fiy1 = _mm_add_ps(fiy1,ty);
2298 fiz1 = _mm_add_ps(fiz1,tz);
2300 fjx3 = _mm_add_ps(fjx3,tx);
2301 fjy3 = _mm_add_ps(fjy3,ty);
2302 fjz3 = _mm_add_ps(fjz3,tz);
2304 /**************************
2305 * CALCULATE INTERACTIONS *
2306 **************************/
2308 r21 = _mm_mul_ps(rsq21,rinv21);
2309 r21 = _mm_andnot_ps(dummy_mask,r21);
2311 /* EWALD ELECTROSTATICS */
2313 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2314 ewrt = _mm_mul_ps(r21,ewtabscale);
2315 ewitab = _mm_cvttps_epi32(ewrt);
2316 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2317 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2318 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2320 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2321 felec = _mm_mul_ps(_mm_mul_ps(qq21,rinv21),_mm_sub_ps(rinvsq21,felec));
2325 fscal = _mm_andnot_ps(dummy_mask,fscal);
2327 /* Calculate temporary vectorial force */
2328 tx = _mm_mul_ps(fscal,dx21);
2329 ty = _mm_mul_ps(fscal,dy21);
2330 tz = _mm_mul_ps(fscal,dz21);
2332 /* Update vectorial force */
2333 fix2 = _mm_add_ps(fix2,tx);
2334 fiy2 = _mm_add_ps(fiy2,ty);
2335 fiz2 = _mm_add_ps(fiz2,tz);
2337 fjx1 = _mm_add_ps(fjx1,tx);
2338 fjy1 = _mm_add_ps(fjy1,ty);
2339 fjz1 = _mm_add_ps(fjz1,tz);
2341 /**************************
2342 * CALCULATE INTERACTIONS *
2343 **************************/
2345 r22 = _mm_mul_ps(rsq22,rinv22);
2346 r22 = _mm_andnot_ps(dummy_mask,r22);
2348 /* EWALD ELECTROSTATICS */
2350 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2351 ewrt = _mm_mul_ps(r22,ewtabscale);
2352 ewitab = _mm_cvttps_epi32(ewrt);
2353 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2354 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2355 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2357 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2358 felec = _mm_mul_ps(_mm_mul_ps(qq22,rinv22),_mm_sub_ps(rinvsq22,felec));
2362 fscal = _mm_andnot_ps(dummy_mask,fscal);
2364 /* Calculate temporary vectorial force */
2365 tx = _mm_mul_ps(fscal,dx22);
2366 ty = _mm_mul_ps(fscal,dy22);
2367 tz = _mm_mul_ps(fscal,dz22);
2369 /* Update vectorial force */
2370 fix2 = _mm_add_ps(fix2,tx);
2371 fiy2 = _mm_add_ps(fiy2,ty);
2372 fiz2 = _mm_add_ps(fiz2,tz);
2374 fjx2 = _mm_add_ps(fjx2,tx);
2375 fjy2 = _mm_add_ps(fjy2,ty);
2376 fjz2 = _mm_add_ps(fjz2,tz);
2378 /**************************
2379 * CALCULATE INTERACTIONS *
2380 **************************/
2382 r23 = _mm_mul_ps(rsq23,rinv23);
2383 r23 = _mm_andnot_ps(dummy_mask,r23);
2385 /* EWALD ELECTROSTATICS */
2387 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2388 ewrt = _mm_mul_ps(r23,ewtabscale);
2389 ewitab = _mm_cvttps_epi32(ewrt);
2390 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2391 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2392 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2394 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2395 felec = _mm_mul_ps(_mm_mul_ps(qq23,rinv23),_mm_sub_ps(rinvsq23,felec));
2399 fscal = _mm_andnot_ps(dummy_mask,fscal);
2401 /* Calculate temporary vectorial force */
2402 tx = _mm_mul_ps(fscal,dx23);
2403 ty = _mm_mul_ps(fscal,dy23);
2404 tz = _mm_mul_ps(fscal,dz23);
2406 /* Update vectorial force */
2407 fix2 = _mm_add_ps(fix2,tx);
2408 fiy2 = _mm_add_ps(fiy2,ty);
2409 fiz2 = _mm_add_ps(fiz2,tz);
2411 fjx3 = _mm_add_ps(fjx3,tx);
2412 fjy3 = _mm_add_ps(fjy3,ty);
2413 fjz3 = _mm_add_ps(fjz3,tz);
2415 /**************************
2416 * CALCULATE INTERACTIONS *
2417 **************************/
2419 r31 = _mm_mul_ps(rsq31,rinv31);
2420 r31 = _mm_andnot_ps(dummy_mask,r31);
2422 /* EWALD ELECTROSTATICS */
2424 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2425 ewrt = _mm_mul_ps(r31,ewtabscale);
2426 ewitab = _mm_cvttps_epi32(ewrt);
2427 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2428 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2429 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2431 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2432 felec = _mm_mul_ps(_mm_mul_ps(qq31,rinv31),_mm_sub_ps(rinvsq31,felec));
2436 fscal = _mm_andnot_ps(dummy_mask,fscal);
2438 /* Calculate temporary vectorial force */
2439 tx = _mm_mul_ps(fscal,dx31);
2440 ty = _mm_mul_ps(fscal,dy31);
2441 tz = _mm_mul_ps(fscal,dz31);
2443 /* Update vectorial force */
2444 fix3 = _mm_add_ps(fix3,tx);
2445 fiy3 = _mm_add_ps(fiy3,ty);
2446 fiz3 = _mm_add_ps(fiz3,tz);
2448 fjx1 = _mm_add_ps(fjx1,tx);
2449 fjy1 = _mm_add_ps(fjy1,ty);
2450 fjz1 = _mm_add_ps(fjz1,tz);
2452 /**************************
2453 * CALCULATE INTERACTIONS *
2454 **************************/
2456 r32 = _mm_mul_ps(rsq32,rinv32);
2457 r32 = _mm_andnot_ps(dummy_mask,r32);
2459 /* EWALD ELECTROSTATICS */
2461 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2462 ewrt = _mm_mul_ps(r32,ewtabscale);
2463 ewitab = _mm_cvttps_epi32(ewrt);
2464 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2465 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2466 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2468 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2469 felec = _mm_mul_ps(_mm_mul_ps(qq32,rinv32),_mm_sub_ps(rinvsq32,felec));
2473 fscal = _mm_andnot_ps(dummy_mask,fscal);
2475 /* Calculate temporary vectorial force */
2476 tx = _mm_mul_ps(fscal,dx32);
2477 ty = _mm_mul_ps(fscal,dy32);
2478 tz = _mm_mul_ps(fscal,dz32);
2480 /* Update vectorial force */
2481 fix3 = _mm_add_ps(fix3,tx);
2482 fiy3 = _mm_add_ps(fiy3,ty);
2483 fiz3 = _mm_add_ps(fiz3,tz);
2485 fjx2 = _mm_add_ps(fjx2,tx);
2486 fjy2 = _mm_add_ps(fjy2,ty);
2487 fjz2 = _mm_add_ps(fjz2,tz);
2489 /**************************
2490 * CALCULATE INTERACTIONS *
2491 **************************/
2493 r33 = _mm_mul_ps(rsq33,rinv33);
2494 r33 = _mm_andnot_ps(dummy_mask,r33);
2496 /* EWALD ELECTROSTATICS */
2498 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2499 ewrt = _mm_mul_ps(r33,ewtabscale);
2500 ewitab = _mm_cvttps_epi32(ewrt);
2501 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2502 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2503 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2505 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2506 felec = _mm_mul_ps(_mm_mul_ps(qq33,rinv33),_mm_sub_ps(rinvsq33,felec));
2510 fscal = _mm_andnot_ps(dummy_mask,fscal);
2512 /* Calculate temporary vectorial force */
2513 tx = _mm_mul_ps(fscal,dx33);
2514 ty = _mm_mul_ps(fscal,dy33);
2515 tz = _mm_mul_ps(fscal,dz33);
2517 /* Update vectorial force */
2518 fix3 = _mm_add_ps(fix3,tx);
2519 fiy3 = _mm_add_ps(fiy3,ty);
2520 fiz3 = _mm_add_ps(fiz3,tz);
2522 fjx3 = _mm_add_ps(fjx3,tx);
2523 fjy3 = _mm_add_ps(fjy3,ty);
2524 fjz3 = _mm_add_ps(fjz3,tz);
2526 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
2527 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
2528 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
2529 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
2531 gmx_mm_decrement_4rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
2532 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,
2533 fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
2535 /* Inner loop uses 385 flops */
2538 /* End of innermost loop */
2540 gmx_mm_update_iforce_4atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
2541 f+i_coord_offset,fshift+i_shift_offset);
2543 /* Increment number of inner iterations */
2544 inneriter += j_index_end - j_index_start;
2546 /* Outer loop uses 24 flops */
2549 /* Increment number of outer iterations */
2552 /* Update outer/inner flops */
2554 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W4W4_F,outeriter*24 + inneriter*385);