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36 * Note: this file was generated by the GROMACS sse2_single kernel generator.
44 #include "../nb_kernel.h"
45 #include "gromacs/gmxlib/nrnb.h"
47 #include "kernelutil_x86_sse2_single.h"
50 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwCSTab_GeomW3W3_VF_sse2_single
51 * Electrostatics interaction: Ewald
52 * VdW interaction: CubicSplineTable
53 * Geometry: Water3-Water3
54 * Calculate force/pot: PotentialAndForce
57 nb_kernel_ElecEw_VdwCSTab_GeomW3W3_VF_sse2_single
58 (t_nblist * gmx_restrict nlist,
59 rvec * gmx_restrict xx,
60 rvec * gmx_restrict ff,
61 struct t_forcerec * gmx_restrict fr,
62 t_mdatoms * gmx_restrict mdatoms,
63 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
64 t_nrnb * gmx_restrict nrnb)
66 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
67 * just 0 for non-waters.
68 * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
69 * jnr indices corresponding to data put in the four positions in the SIMD register.
71 int i_shift_offset,i_coord_offset,outeriter,inneriter;
72 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
73 int jnrA,jnrB,jnrC,jnrD;
74 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
75 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
76 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
78 real *shiftvec,*fshift,*x,*f;
79 real *fjptrA,*fjptrB,*fjptrC,*fjptrD;
81 __m128 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
83 __m128 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
85 __m128 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
87 __m128 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
88 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
89 __m128 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
90 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
91 __m128 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
92 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
93 __m128 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
94 __m128 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
95 __m128 dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
96 __m128 dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
97 __m128 dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
98 __m128 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
99 __m128 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
100 __m128 dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
101 __m128 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
102 __m128 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
103 __m128 velec,felec,velecsum,facel,crf,krf,krf2;
106 __m128 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
109 __m128 one_sixth = _mm_set1_ps(1.0/6.0);
110 __m128 one_twelfth = _mm_set1_ps(1.0/12.0);
112 __m128i ifour = _mm_set1_epi32(4);
113 __m128 rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
116 __m128 ewtabscale,eweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
118 __m128 dummy_mask,cutoff_mask;
119 __m128 signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
120 __m128 one = _mm_set1_ps(1.0);
121 __m128 two = _mm_set1_ps(2.0);
127 jindex = nlist->jindex;
129 shiftidx = nlist->shift;
131 shiftvec = fr->shift_vec[0];
132 fshift = fr->fshift[0];
133 facel = _mm_set1_ps(fr->ic->epsfac);
134 charge = mdatoms->chargeA;
135 nvdwtype = fr->ntype;
137 vdwtype = mdatoms->typeA;
139 vftab = kernel_data->table_vdw->data;
140 vftabscale = _mm_set1_ps(kernel_data->table_vdw->scale);
142 sh_ewald = _mm_set1_ps(fr->ic->sh_ewald);
143 ewtab = fr->ic->tabq_coul_FDV0;
144 ewtabscale = _mm_set1_ps(fr->ic->tabq_scale);
145 ewtabhalfspace = _mm_set1_ps(0.5/fr->ic->tabq_scale);
147 /* Setup water-specific parameters */
148 inr = nlist->iinr[0];
149 iq0 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+0]));
150 iq1 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
151 iq2 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
152 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
154 jq0 = _mm_set1_ps(charge[inr+0]);
155 jq1 = _mm_set1_ps(charge[inr+1]);
156 jq2 = _mm_set1_ps(charge[inr+2]);
157 vdwjidx0A = 2*vdwtype[inr+0];
158 qq00 = _mm_mul_ps(iq0,jq0);
159 c6_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A]);
160 c12_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A+1]);
161 qq01 = _mm_mul_ps(iq0,jq1);
162 qq02 = _mm_mul_ps(iq0,jq2);
163 qq10 = _mm_mul_ps(iq1,jq0);
164 qq11 = _mm_mul_ps(iq1,jq1);
165 qq12 = _mm_mul_ps(iq1,jq2);
166 qq20 = _mm_mul_ps(iq2,jq0);
167 qq21 = _mm_mul_ps(iq2,jq1);
168 qq22 = _mm_mul_ps(iq2,jq2);
170 /* Avoid stupid compiler warnings */
171 jnrA = jnrB = jnrC = jnrD = 0;
180 for(iidx=0;iidx<4*DIM;iidx++)
185 /* Start outer loop over neighborlists */
186 for(iidx=0; iidx<nri; iidx++)
188 /* Load shift vector for this list */
189 i_shift_offset = DIM*shiftidx[iidx];
191 /* Load limits for loop over neighbors */
192 j_index_start = jindex[iidx];
193 j_index_end = jindex[iidx+1];
195 /* Get outer coordinate index */
197 i_coord_offset = DIM*inr;
199 /* Load i particle coords and add shift vector */
200 gmx_mm_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset,
201 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
203 fix0 = _mm_setzero_ps();
204 fiy0 = _mm_setzero_ps();
205 fiz0 = _mm_setzero_ps();
206 fix1 = _mm_setzero_ps();
207 fiy1 = _mm_setzero_ps();
208 fiz1 = _mm_setzero_ps();
209 fix2 = _mm_setzero_ps();
210 fiy2 = _mm_setzero_ps();
211 fiz2 = _mm_setzero_ps();
213 /* Reset potential sums */
214 velecsum = _mm_setzero_ps();
215 vvdwsum = _mm_setzero_ps();
217 /* Start inner kernel loop */
218 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
221 /* Get j neighbor index, and coordinate index */
226 j_coord_offsetA = DIM*jnrA;
227 j_coord_offsetB = DIM*jnrB;
228 j_coord_offsetC = DIM*jnrC;
229 j_coord_offsetD = DIM*jnrD;
231 /* load j atom coordinates */
232 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
233 x+j_coord_offsetC,x+j_coord_offsetD,
234 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
236 /* Calculate displacement vector */
237 dx00 = _mm_sub_ps(ix0,jx0);
238 dy00 = _mm_sub_ps(iy0,jy0);
239 dz00 = _mm_sub_ps(iz0,jz0);
240 dx01 = _mm_sub_ps(ix0,jx1);
241 dy01 = _mm_sub_ps(iy0,jy1);
242 dz01 = _mm_sub_ps(iz0,jz1);
243 dx02 = _mm_sub_ps(ix0,jx2);
244 dy02 = _mm_sub_ps(iy0,jy2);
245 dz02 = _mm_sub_ps(iz0,jz2);
246 dx10 = _mm_sub_ps(ix1,jx0);
247 dy10 = _mm_sub_ps(iy1,jy0);
248 dz10 = _mm_sub_ps(iz1,jz0);
249 dx11 = _mm_sub_ps(ix1,jx1);
250 dy11 = _mm_sub_ps(iy1,jy1);
251 dz11 = _mm_sub_ps(iz1,jz1);
252 dx12 = _mm_sub_ps(ix1,jx2);
253 dy12 = _mm_sub_ps(iy1,jy2);
254 dz12 = _mm_sub_ps(iz1,jz2);
255 dx20 = _mm_sub_ps(ix2,jx0);
256 dy20 = _mm_sub_ps(iy2,jy0);
257 dz20 = _mm_sub_ps(iz2,jz0);
258 dx21 = _mm_sub_ps(ix2,jx1);
259 dy21 = _mm_sub_ps(iy2,jy1);
260 dz21 = _mm_sub_ps(iz2,jz1);
261 dx22 = _mm_sub_ps(ix2,jx2);
262 dy22 = _mm_sub_ps(iy2,jy2);
263 dz22 = _mm_sub_ps(iz2,jz2);
265 /* Calculate squared distance and things based on it */
266 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
267 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
268 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
269 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
270 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
271 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
272 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
273 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
274 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
276 rinv00 = sse2_invsqrt_f(rsq00);
277 rinv01 = sse2_invsqrt_f(rsq01);
278 rinv02 = sse2_invsqrt_f(rsq02);
279 rinv10 = sse2_invsqrt_f(rsq10);
280 rinv11 = sse2_invsqrt_f(rsq11);
281 rinv12 = sse2_invsqrt_f(rsq12);
282 rinv20 = sse2_invsqrt_f(rsq20);
283 rinv21 = sse2_invsqrt_f(rsq21);
284 rinv22 = sse2_invsqrt_f(rsq22);
286 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
287 rinvsq01 = _mm_mul_ps(rinv01,rinv01);
288 rinvsq02 = _mm_mul_ps(rinv02,rinv02);
289 rinvsq10 = _mm_mul_ps(rinv10,rinv10);
290 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
291 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
292 rinvsq20 = _mm_mul_ps(rinv20,rinv20);
293 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
294 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
296 fjx0 = _mm_setzero_ps();
297 fjy0 = _mm_setzero_ps();
298 fjz0 = _mm_setzero_ps();
299 fjx1 = _mm_setzero_ps();
300 fjy1 = _mm_setzero_ps();
301 fjz1 = _mm_setzero_ps();
302 fjx2 = _mm_setzero_ps();
303 fjy2 = _mm_setzero_ps();
304 fjz2 = _mm_setzero_ps();
306 /**************************
307 * CALCULATE INTERACTIONS *
308 **************************/
310 r00 = _mm_mul_ps(rsq00,rinv00);
312 /* Calculate table index by multiplying r with table scale and truncate to integer */
313 rt = _mm_mul_ps(r00,vftabscale);
314 vfitab = _mm_cvttps_epi32(rt);
315 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
316 vfitab = _mm_slli_epi32(vfitab,3);
318 /* EWALD ELECTROSTATICS */
320 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
321 ewrt = _mm_mul_ps(r00,ewtabscale);
322 ewitab = _mm_cvttps_epi32(ewrt);
323 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
324 ewitab = _mm_slli_epi32(ewitab,2);
325 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
326 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
327 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
328 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
329 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
330 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
331 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
332 velec = _mm_mul_ps(qq00,_mm_sub_ps(rinv00,velec));
333 felec = _mm_mul_ps(_mm_mul_ps(qq00,rinv00),_mm_sub_ps(rinvsq00,felec));
335 /* CUBIC SPLINE TABLE DISPERSION */
336 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
337 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
338 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
339 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
340 _MM_TRANSPOSE4_PS(Y,F,G,H);
341 Heps = _mm_mul_ps(vfeps,H);
342 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
343 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
344 vvdw6 = _mm_mul_ps(c6_00,VV);
345 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
346 fvdw6 = _mm_mul_ps(c6_00,FF);
348 /* CUBIC SPLINE TABLE REPULSION */
349 vfitab = _mm_add_epi32(vfitab,ifour);
350 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
351 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
352 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
353 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
354 _MM_TRANSPOSE4_PS(Y,F,G,H);
355 Heps = _mm_mul_ps(vfeps,H);
356 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
357 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
358 vvdw12 = _mm_mul_ps(c12_00,VV);
359 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
360 fvdw12 = _mm_mul_ps(c12_00,FF);
361 vvdw = _mm_add_ps(vvdw12,vvdw6);
362 fvdw = _mm_xor_ps(signbit,_mm_mul_ps(_mm_add_ps(fvdw6,fvdw12),_mm_mul_ps(vftabscale,rinv00)));
364 /* Update potential sum for this i atom from the interaction with this j atom. */
365 velecsum = _mm_add_ps(velecsum,velec);
366 vvdwsum = _mm_add_ps(vvdwsum,vvdw);
368 fscal = _mm_add_ps(felec,fvdw);
370 /* Calculate temporary vectorial force */
371 tx = _mm_mul_ps(fscal,dx00);
372 ty = _mm_mul_ps(fscal,dy00);
373 tz = _mm_mul_ps(fscal,dz00);
375 /* Update vectorial force */
376 fix0 = _mm_add_ps(fix0,tx);
377 fiy0 = _mm_add_ps(fiy0,ty);
378 fiz0 = _mm_add_ps(fiz0,tz);
380 fjx0 = _mm_add_ps(fjx0,tx);
381 fjy0 = _mm_add_ps(fjy0,ty);
382 fjz0 = _mm_add_ps(fjz0,tz);
384 /**************************
385 * CALCULATE INTERACTIONS *
386 **************************/
388 r01 = _mm_mul_ps(rsq01,rinv01);
390 /* EWALD ELECTROSTATICS */
392 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
393 ewrt = _mm_mul_ps(r01,ewtabscale);
394 ewitab = _mm_cvttps_epi32(ewrt);
395 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
396 ewitab = _mm_slli_epi32(ewitab,2);
397 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
398 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
399 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
400 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
401 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
402 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
403 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
404 velec = _mm_mul_ps(qq01,_mm_sub_ps(rinv01,velec));
405 felec = _mm_mul_ps(_mm_mul_ps(qq01,rinv01),_mm_sub_ps(rinvsq01,felec));
407 /* Update potential sum for this i atom from the interaction with this j atom. */
408 velecsum = _mm_add_ps(velecsum,velec);
412 /* Calculate temporary vectorial force */
413 tx = _mm_mul_ps(fscal,dx01);
414 ty = _mm_mul_ps(fscal,dy01);
415 tz = _mm_mul_ps(fscal,dz01);
417 /* Update vectorial force */
418 fix0 = _mm_add_ps(fix0,tx);
419 fiy0 = _mm_add_ps(fiy0,ty);
420 fiz0 = _mm_add_ps(fiz0,tz);
422 fjx1 = _mm_add_ps(fjx1,tx);
423 fjy1 = _mm_add_ps(fjy1,ty);
424 fjz1 = _mm_add_ps(fjz1,tz);
426 /**************************
427 * CALCULATE INTERACTIONS *
428 **************************/
430 r02 = _mm_mul_ps(rsq02,rinv02);
432 /* EWALD ELECTROSTATICS */
434 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
435 ewrt = _mm_mul_ps(r02,ewtabscale);
436 ewitab = _mm_cvttps_epi32(ewrt);
437 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
438 ewitab = _mm_slli_epi32(ewitab,2);
439 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
440 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
441 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
442 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
443 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
444 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
445 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
446 velec = _mm_mul_ps(qq02,_mm_sub_ps(rinv02,velec));
447 felec = _mm_mul_ps(_mm_mul_ps(qq02,rinv02),_mm_sub_ps(rinvsq02,felec));
449 /* Update potential sum for this i atom from the interaction with this j atom. */
450 velecsum = _mm_add_ps(velecsum,velec);
454 /* Calculate temporary vectorial force */
455 tx = _mm_mul_ps(fscal,dx02);
456 ty = _mm_mul_ps(fscal,dy02);
457 tz = _mm_mul_ps(fscal,dz02);
459 /* Update vectorial force */
460 fix0 = _mm_add_ps(fix0,tx);
461 fiy0 = _mm_add_ps(fiy0,ty);
462 fiz0 = _mm_add_ps(fiz0,tz);
464 fjx2 = _mm_add_ps(fjx2,tx);
465 fjy2 = _mm_add_ps(fjy2,ty);
466 fjz2 = _mm_add_ps(fjz2,tz);
468 /**************************
469 * CALCULATE INTERACTIONS *
470 **************************/
472 r10 = _mm_mul_ps(rsq10,rinv10);
474 /* EWALD ELECTROSTATICS */
476 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
477 ewrt = _mm_mul_ps(r10,ewtabscale);
478 ewitab = _mm_cvttps_epi32(ewrt);
479 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
480 ewitab = _mm_slli_epi32(ewitab,2);
481 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
482 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
483 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
484 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
485 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
486 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
487 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
488 velec = _mm_mul_ps(qq10,_mm_sub_ps(rinv10,velec));
489 felec = _mm_mul_ps(_mm_mul_ps(qq10,rinv10),_mm_sub_ps(rinvsq10,felec));
491 /* Update potential sum for this i atom from the interaction with this j atom. */
492 velecsum = _mm_add_ps(velecsum,velec);
496 /* Calculate temporary vectorial force */
497 tx = _mm_mul_ps(fscal,dx10);
498 ty = _mm_mul_ps(fscal,dy10);
499 tz = _mm_mul_ps(fscal,dz10);
501 /* Update vectorial force */
502 fix1 = _mm_add_ps(fix1,tx);
503 fiy1 = _mm_add_ps(fiy1,ty);
504 fiz1 = _mm_add_ps(fiz1,tz);
506 fjx0 = _mm_add_ps(fjx0,tx);
507 fjy0 = _mm_add_ps(fjy0,ty);
508 fjz0 = _mm_add_ps(fjz0,tz);
510 /**************************
511 * CALCULATE INTERACTIONS *
512 **************************/
514 r11 = _mm_mul_ps(rsq11,rinv11);
516 /* EWALD ELECTROSTATICS */
518 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
519 ewrt = _mm_mul_ps(r11,ewtabscale);
520 ewitab = _mm_cvttps_epi32(ewrt);
521 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
522 ewitab = _mm_slli_epi32(ewitab,2);
523 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
524 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
525 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
526 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
527 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
528 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
529 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
530 velec = _mm_mul_ps(qq11,_mm_sub_ps(rinv11,velec));
531 felec = _mm_mul_ps(_mm_mul_ps(qq11,rinv11),_mm_sub_ps(rinvsq11,felec));
533 /* Update potential sum for this i atom from the interaction with this j atom. */
534 velecsum = _mm_add_ps(velecsum,velec);
538 /* Calculate temporary vectorial force */
539 tx = _mm_mul_ps(fscal,dx11);
540 ty = _mm_mul_ps(fscal,dy11);
541 tz = _mm_mul_ps(fscal,dz11);
543 /* Update vectorial force */
544 fix1 = _mm_add_ps(fix1,tx);
545 fiy1 = _mm_add_ps(fiy1,ty);
546 fiz1 = _mm_add_ps(fiz1,tz);
548 fjx1 = _mm_add_ps(fjx1,tx);
549 fjy1 = _mm_add_ps(fjy1,ty);
550 fjz1 = _mm_add_ps(fjz1,tz);
552 /**************************
553 * CALCULATE INTERACTIONS *
554 **************************/
556 r12 = _mm_mul_ps(rsq12,rinv12);
558 /* EWALD ELECTROSTATICS */
560 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
561 ewrt = _mm_mul_ps(r12,ewtabscale);
562 ewitab = _mm_cvttps_epi32(ewrt);
563 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
564 ewitab = _mm_slli_epi32(ewitab,2);
565 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
566 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
567 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
568 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
569 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
570 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
571 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
572 velec = _mm_mul_ps(qq12,_mm_sub_ps(rinv12,velec));
573 felec = _mm_mul_ps(_mm_mul_ps(qq12,rinv12),_mm_sub_ps(rinvsq12,felec));
575 /* Update potential sum for this i atom from the interaction with this j atom. */
576 velecsum = _mm_add_ps(velecsum,velec);
580 /* Calculate temporary vectorial force */
581 tx = _mm_mul_ps(fscal,dx12);
582 ty = _mm_mul_ps(fscal,dy12);
583 tz = _mm_mul_ps(fscal,dz12);
585 /* Update vectorial force */
586 fix1 = _mm_add_ps(fix1,tx);
587 fiy1 = _mm_add_ps(fiy1,ty);
588 fiz1 = _mm_add_ps(fiz1,tz);
590 fjx2 = _mm_add_ps(fjx2,tx);
591 fjy2 = _mm_add_ps(fjy2,ty);
592 fjz2 = _mm_add_ps(fjz2,tz);
594 /**************************
595 * CALCULATE INTERACTIONS *
596 **************************/
598 r20 = _mm_mul_ps(rsq20,rinv20);
600 /* EWALD ELECTROSTATICS */
602 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
603 ewrt = _mm_mul_ps(r20,ewtabscale);
604 ewitab = _mm_cvttps_epi32(ewrt);
605 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
606 ewitab = _mm_slli_epi32(ewitab,2);
607 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
608 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
609 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
610 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
611 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
612 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
613 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
614 velec = _mm_mul_ps(qq20,_mm_sub_ps(rinv20,velec));
615 felec = _mm_mul_ps(_mm_mul_ps(qq20,rinv20),_mm_sub_ps(rinvsq20,felec));
617 /* Update potential sum for this i atom from the interaction with this j atom. */
618 velecsum = _mm_add_ps(velecsum,velec);
622 /* Calculate temporary vectorial force */
623 tx = _mm_mul_ps(fscal,dx20);
624 ty = _mm_mul_ps(fscal,dy20);
625 tz = _mm_mul_ps(fscal,dz20);
627 /* Update vectorial force */
628 fix2 = _mm_add_ps(fix2,tx);
629 fiy2 = _mm_add_ps(fiy2,ty);
630 fiz2 = _mm_add_ps(fiz2,tz);
632 fjx0 = _mm_add_ps(fjx0,tx);
633 fjy0 = _mm_add_ps(fjy0,ty);
634 fjz0 = _mm_add_ps(fjz0,tz);
636 /**************************
637 * CALCULATE INTERACTIONS *
638 **************************/
640 r21 = _mm_mul_ps(rsq21,rinv21);
642 /* EWALD ELECTROSTATICS */
644 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
645 ewrt = _mm_mul_ps(r21,ewtabscale);
646 ewitab = _mm_cvttps_epi32(ewrt);
647 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
648 ewitab = _mm_slli_epi32(ewitab,2);
649 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
650 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
651 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
652 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
653 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
654 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
655 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
656 velec = _mm_mul_ps(qq21,_mm_sub_ps(rinv21,velec));
657 felec = _mm_mul_ps(_mm_mul_ps(qq21,rinv21),_mm_sub_ps(rinvsq21,felec));
659 /* Update potential sum for this i atom from the interaction with this j atom. */
660 velecsum = _mm_add_ps(velecsum,velec);
664 /* Calculate temporary vectorial force */
665 tx = _mm_mul_ps(fscal,dx21);
666 ty = _mm_mul_ps(fscal,dy21);
667 tz = _mm_mul_ps(fscal,dz21);
669 /* Update vectorial force */
670 fix2 = _mm_add_ps(fix2,tx);
671 fiy2 = _mm_add_ps(fiy2,ty);
672 fiz2 = _mm_add_ps(fiz2,tz);
674 fjx1 = _mm_add_ps(fjx1,tx);
675 fjy1 = _mm_add_ps(fjy1,ty);
676 fjz1 = _mm_add_ps(fjz1,tz);
678 /**************************
679 * CALCULATE INTERACTIONS *
680 **************************/
682 r22 = _mm_mul_ps(rsq22,rinv22);
684 /* EWALD ELECTROSTATICS */
686 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
687 ewrt = _mm_mul_ps(r22,ewtabscale);
688 ewitab = _mm_cvttps_epi32(ewrt);
689 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
690 ewitab = _mm_slli_epi32(ewitab,2);
691 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
692 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
693 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
694 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
695 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
696 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
697 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
698 velec = _mm_mul_ps(qq22,_mm_sub_ps(rinv22,velec));
699 felec = _mm_mul_ps(_mm_mul_ps(qq22,rinv22),_mm_sub_ps(rinvsq22,felec));
701 /* Update potential sum for this i atom from the interaction with this j atom. */
702 velecsum = _mm_add_ps(velecsum,velec);
706 /* Calculate temporary vectorial force */
707 tx = _mm_mul_ps(fscal,dx22);
708 ty = _mm_mul_ps(fscal,dy22);
709 tz = _mm_mul_ps(fscal,dz22);
711 /* Update vectorial force */
712 fix2 = _mm_add_ps(fix2,tx);
713 fiy2 = _mm_add_ps(fiy2,ty);
714 fiz2 = _mm_add_ps(fiz2,tz);
716 fjx2 = _mm_add_ps(fjx2,tx);
717 fjy2 = _mm_add_ps(fjy2,ty);
718 fjz2 = _mm_add_ps(fjz2,tz);
720 fjptrA = f+j_coord_offsetA;
721 fjptrB = f+j_coord_offsetB;
722 fjptrC = f+j_coord_offsetC;
723 fjptrD = f+j_coord_offsetD;
725 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
726 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
728 /* Inner loop uses 403 flops */
734 /* Get j neighbor index, and coordinate index */
735 jnrlistA = jjnr[jidx];
736 jnrlistB = jjnr[jidx+1];
737 jnrlistC = jjnr[jidx+2];
738 jnrlistD = jjnr[jidx+3];
739 /* Sign of each element will be negative for non-real atoms.
740 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
741 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
743 dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
744 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
745 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
746 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
747 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
748 j_coord_offsetA = DIM*jnrA;
749 j_coord_offsetB = DIM*jnrB;
750 j_coord_offsetC = DIM*jnrC;
751 j_coord_offsetD = DIM*jnrD;
753 /* load j atom coordinates */
754 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
755 x+j_coord_offsetC,x+j_coord_offsetD,
756 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
758 /* Calculate displacement vector */
759 dx00 = _mm_sub_ps(ix0,jx0);
760 dy00 = _mm_sub_ps(iy0,jy0);
761 dz00 = _mm_sub_ps(iz0,jz0);
762 dx01 = _mm_sub_ps(ix0,jx1);
763 dy01 = _mm_sub_ps(iy0,jy1);
764 dz01 = _mm_sub_ps(iz0,jz1);
765 dx02 = _mm_sub_ps(ix0,jx2);
766 dy02 = _mm_sub_ps(iy0,jy2);
767 dz02 = _mm_sub_ps(iz0,jz2);
768 dx10 = _mm_sub_ps(ix1,jx0);
769 dy10 = _mm_sub_ps(iy1,jy0);
770 dz10 = _mm_sub_ps(iz1,jz0);
771 dx11 = _mm_sub_ps(ix1,jx1);
772 dy11 = _mm_sub_ps(iy1,jy1);
773 dz11 = _mm_sub_ps(iz1,jz1);
774 dx12 = _mm_sub_ps(ix1,jx2);
775 dy12 = _mm_sub_ps(iy1,jy2);
776 dz12 = _mm_sub_ps(iz1,jz2);
777 dx20 = _mm_sub_ps(ix2,jx0);
778 dy20 = _mm_sub_ps(iy2,jy0);
779 dz20 = _mm_sub_ps(iz2,jz0);
780 dx21 = _mm_sub_ps(ix2,jx1);
781 dy21 = _mm_sub_ps(iy2,jy1);
782 dz21 = _mm_sub_ps(iz2,jz1);
783 dx22 = _mm_sub_ps(ix2,jx2);
784 dy22 = _mm_sub_ps(iy2,jy2);
785 dz22 = _mm_sub_ps(iz2,jz2);
787 /* Calculate squared distance and things based on it */
788 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
789 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
790 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
791 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
792 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
793 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
794 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
795 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
796 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
798 rinv00 = sse2_invsqrt_f(rsq00);
799 rinv01 = sse2_invsqrt_f(rsq01);
800 rinv02 = sse2_invsqrt_f(rsq02);
801 rinv10 = sse2_invsqrt_f(rsq10);
802 rinv11 = sse2_invsqrt_f(rsq11);
803 rinv12 = sse2_invsqrt_f(rsq12);
804 rinv20 = sse2_invsqrt_f(rsq20);
805 rinv21 = sse2_invsqrt_f(rsq21);
806 rinv22 = sse2_invsqrt_f(rsq22);
808 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
809 rinvsq01 = _mm_mul_ps(rinv01,rinv01);
810 rinvsq02 = _mm_mul_ps(rinv02,rinv02);
811 rinvsq10 = _mm_mul_ps(rinv10,rinv10);
812 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
813 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
814 rinvsq20 = _mm_mul_ps(rinv20,rinv20);
815 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
816 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
818 fjx0 = _mm_setzero_ps();
819 fjy0 = _mm_setzero_ps();
820 fjz0 = _mm_setzero_ps();
821 fjx1 = _mm_setzero_ps();
822 fjy1 = _mm_setzero_ps();
823 fjz1 = _mm_setzero_ps();
824 fjx2 = _mm_setzero_ps();
825 fjy2 = _mm_setzero_ps();
826 fjz2 = _mm_setzero_ps();
828 /**************************
829 * CALCULATE INTERACTIONS *
830 **************************/
832 r00 = _mm_mul_ps(rsq00,rinv00);
833 r00 = _mm_andnot_ps(dummy_mask,r00);
835 /* Calculate table index by multiplying r with table scale and truncate to integer */
836 rt = _mm_mul_ps(r00,vftabscale);
837 vfitab = _mm_cvttps_epi32(rt);
838 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
839 vfitab = _mm_slli_epi32(vfitab,3);
841 /* EWALD ELECTROSTATICS */
843 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
844 ewrt = _mm_mul_ps(r00,ewtabscale);
845 ewitab = _mm_cvttps_epi32(ewrt);
846 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
847 ewitab = _mm_slli_epi32(ewitab,2);
848 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
849 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
850 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
851 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
852 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
853 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
854 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
855 velec = _mm_mul_ps(qq00,_mm_sub_ps(rinv00,velec));
856 felec = _mm_mul_ps(_mm_mul_ps(qq00,rinv00),_mm_sub_ps(rinvsq00,felec));
858 /* CUBIC SPLINE TABLE DISPERSION */
859 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
860 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
861 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
862 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
863 _MM_TRANSPOSE4_PS(Y,F,G,H);
864 Heps = _mm_mul_ps(vfeps,H);
865 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
866 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
867 vvdw6 = _mm_mul_ps(c6_00,VV);
868 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
869 fvdw6 = _mm_mul_ps(c6_00,FF);
871 /* CUBIC SPLINE TABLE REPULSION */
872 vfitab = _mm_add_epi32(vfitab,ifour);
873 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
874 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
875 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
876 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
877 _MM_TRANSPOSE4_PS(Y,F,G,H);
878 Heps = _mm_mul_ps(vfeps,H);
879 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
880 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
881 vvdw12 = _mm_mul_ps(c12_00,VV);
882 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
883 fvdw12 = _mm_mul_ps(c12_00,FF);
884 vvdw = _mm_add_ps(vvdw12,vvdw6);
885 fvdw = _mm_xor_ps(signbit,_mm_mul_ps(_mm_add_ps(fvdw6,fvdw12),_mm_mul_ps(vftabscale,rinv00)));
887 /* Update potential sum for this i atom from the interaction with this j atom. */
888 velec = _mm_andnot_ps(dummy_mask,velec);
889 velecsum = _mm_add_ps(velecsum,velec);
890 vvdw = _mm_andnot_ps(dummy_mask,vvdw);
891 vvdwsum = _mm_add_ps(vvdwsum,vvdw);
893 fscal = _mm_add_ps(felec,fvdw);
895 fscal = _mm_andnot_ps(dummy_mask,fscal);
897 /* Calculate temporary vectorial force */
898 tx = _mm_mul_ps(fscal,dx00);
899 ty = _mm_mul_ps(fscal,dy00);
900 tz = _mm_mul_ps(fscal,dz00);
902 /* Update vectorial force */
903 fix0 = _mm_add_ps(fix0,tx);
904 fiy0 = _mm_add_ps(fiy0,ty);
905 fiz0 = _mm_add_ps(fiz0,tz);
907 fjx0 = _mm_add_ps(fjx0,tx);
908 fjy0 = _mm_add_ps(fjy0,ty);
909 fjz0 = _mm_add_ps(fjz0,tz);
911 /**************************
912 * CALCULATE INTERACTIONS *
913 **************************/
915 r01 = _mm_mul_ps(rsq01,rinv01);
916 r01 = _mm_andnot_ps(dummy_mask,r01);
918 /* EWALD ELECTROSTATICS */
920 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
921 ewrt = _mm_mul_ps(r01,ewtabscale);
922 ewitab = _mm_cvttps_epi32(ewrt);
923 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
924 ewitab = _mm_slli_epi32(ewitab,2);
925 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
926 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
927 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
928 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
929 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
930 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
931 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
932 velec = _mm_mul_ps(qq01,_mm_sub_ps(rinv01,velec));
933 felec = _mm_mul_ps(_mm_mul_ps(qq01,rinv01),_mm_sub_ps(rinvsq01,felec));
935 /* Update potential sum for this i atom from the interaction with this j atom. */
936 velec = _mm_andnot_ps(dummy_mask,velec);
937 velecsum = _mm_add_ps(velecsum,velec);
941 fscal = _mm_andnot_ps(dummy_mask,fscal);
943 /* Calculate temporary vectorial force */
944 tx = _mm_mul_ps(fscal,dx01);
945 ty = _mm_mul_ps(fscal,dy01);
946 tz = _mm_mul_ps(fscal,dz01);
948 /* Update vectorial force */
949 fix0 = _mm_add_ps(fix0,tx);
950 fiy0 = _mm_add_ps(fiy0,ty);
951 fiz0 = _mm_add_ps(fiz0,tz);
953 fjx1 = _mm_add_ps(fjx1,tx);
954 fjy1 = _mm_add_ps(fjy1,ty);
955 fjz1 = _mm_add_ps(fjz1,tz);
957 /**************************
958 * CALCULATE INTERACTIONS *
959 **************************/
961 r02 = _mm_mul_ps(rsq02,rinv02);
962 r02 = _mm_andnot_ps(dummy_mask,r02);
964 /* EWALD ELECTROSTATICS */
966 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
967 ewrt = _mm_mul_ps(r02,ewtabscale);
968 ewitab = _mm_cvttps_epi32(ewrt);
969 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
970 ewitab = _mm_slli_epi32(ewitab,2);
971 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
972 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
973 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
974 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
975 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
976 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
977 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
978 velec = _mm_mul_ps(qq02,_mm_sub_ps(rinv02,velec));
979 felec = _mm_mul_ps(_mm_mul_ps(qq02,rinv02),_mm_sub_ps(rinvsq02,felec));
981 /* Update potential sum for this i atom from the interaction with this j atom. */
982 velec = _mm_andnot_ps(dummy_mask,velec);
983 velecsum = _mm_add_ps(velecsum,velec);
987 fscal = _mm_andnot_ps(dummy_mask,fscal);
989 /* Calculate temporary vectorial force */
990 tx = _mm_mul_ps(fscal,dx02);
991 ty = _mm_mul_ps(fscal,dy02);
992 tz = _mm_mul_ps(fscal,dz02);
994 /* Update vectorial force */
995 fix0 = _mm_add_ps(fix0,tx);
996 fiy0 = _mm_add_ps(fiy0,ty);
997 fiz0 = _mm_add_ps(fiz0,tz);
999 fjx2 = _mm_add_ps(fjx2,tx);
1000 fjy2 = _mm_add_ps(fjy2,ty);
1001 fjz2 = _mm_add_ps(fjz2,tz);
1003 /**************************
1004 * CALCULATE INTERACTIONS *
1005 **************************/
1007 r10 = _mm_mul_ps(rsq10,rinv10);
1008 r10 = _mm_andnot_ps(dummy_mask,r10);
1010 /* EWALD ELECTROSTATICS */
1012 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1013 ewrt = _mm_mul_ps(r10,ewtabscale);
1014 ewitab = _mm_cvttps_epi32(ewrt);
1015 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1016 ewitab = _mm_slli_epi32(ewitab,2);
1017 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1018 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1019 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1020 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1021 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1022 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1023 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1024 velec = _mm_mul_ps(qq10,_mm_sub_ps(rinv10,velec));
1025 felec = _mm_mul_ps(_mm_mul_ps(qq10,rinv10),_mm_sub_ps(rinvsq10,felec));
1027 /* Update potential sum for this i atom from the interaction with this j atom. */
1028 velec = _mm_andnot_ps(dummy_mask,velec);
1029 velecsum = _mm_add_ps(velecsum,velec);
1033 fscal = _mm_andnot_ps(dummy_mask,fscal);
1035 /* Calculate temporary vectorial force */
1036 tx = _mm_mul_ps(fscal,dx10);
1037 ty = _mm_mul_ps(fscal,dy10);
1038 tz = _mm_mul_ps(fscal,dz10);
1040 /* Update vectorial force */
1041 fix1 = _mm_add_ps(fix1,tx);
1042 fiy1 = _mm_add_ps(fiy1,ty);
1043 fiz1 = _mm_add_ps(fiz1,tz);
1045 fjx0 = _mm_add_ps(fjx0,tx);
1046 fjy0 = _mm_add_ps(fjy0,ty);
1047 fjz0 = _mm_add_ps(fjz0,tz);
1049 /**************************
1050 * CALCULATE INTERACTIONS *
1051 **************************/
1053 r11 = _mm_mul_ps(rsq11,rinv11);
1054 r11 = _mm_andnot_ps(dummy_mask,r11);
1056 /* EWALD ELECTROSTATICS */
1058 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1059 ewrt = _mm_mul_ps(r11,ewtabscale);
1060 ewitab = _mm_cvttps_epi32(ewrt);
1061 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1062 ewitab = _mm_slli_epi32(ewitab,2);
1063 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1064 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1065 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1066 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1067 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1068 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1069 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1070 velec = _mm_mul_ps(qq11,_mm_sub_ps(rinv11,velec));
1071 felec = _mm_mul_ps(_mm_mul_ps(qq11,rinv11),_mm_sub_ps(rinvsq11,felec));
1073 /* Update potential sum for this i atom from the interaction with this j atom. */
1074 velec = _mm_andnot_ps(dummy_mask,velec);
1075 velecsum = _mm_add_ps(velecsum,velec);
1079 fscal = _mm_andnot_ps(dummy_mask,fscal);
1081 /* Calculate temporary vectorial force */
1082 tx = _mm_mul_ps(fscal,dx11);
1083 ty = _mm_mul_ps(fscal,dy11);
1084 tz = _mm_mul_ps(fscal,dz11);
1086 /* Update vectorial force */
1087 fix1 = _mm_add_ps(fix1,tx);
1088 fiy1 = _mm_add_ps(fiy1,ty);
1089 fiz1 = _mm_add_ps(fiz1,tz);
1091 fjx1 = _mm_add_ps(fjx1,tx);
1092 fjy1 = _mm_add_ps(fjy1,ty);
1093 fjz1 = _mm_add_ps(fjz1,tz);
1095 /**************************
1096 * CALCULATE INTERACTIONS *
1097 **************************/
1099 r12 = _mm_mul_ps(rsq12,rinv12);
1100 r12 = _mm_andnot_ps(dummy_mask,r12);
1102 /* EWALD ELECTROSTATICS */
1104 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1105 ewrt = _mm_mul_ps(r12,ewtabscale);
1106 ewitab = _mm_cvttps_epi32(ewrt);
1107 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1108 ewitab = _mm_slli_epi32(ewitab,2);
1109 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1110 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1111 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1112 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1113 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1114 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1115 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1116 velec = _mm_mul_ps(qq12,_mm_sub_ps(rinv12,velec));
1117 felec = _mm_mul_ps(_mm_mul_ps(qq12,rinv12),_mm_sub_ps(rinvsq12,felec));
1119 /* Update potential sum for this i atom from the interaction with this j atom. */
1120 velec = _mm_andnot_ps(dummy_mask,velec);
1121 velecsum = _mm_add_ps(velecsum,velec);
1125 fscal = _mm_andnot_ps(dummy_mask,fscal);
1127 /* Calculate temporary vectorial force */
1128 tx = _mm_mul_ps(fscal,dx12);
1129 ty = _mm_mul_ps(fscal,dy12);
1130 tz = _mm_mul_ps(fscal,dz12);
1132 /* Update vectorial force */
1133 fix1 = _mm_add_ps(fix1,tx);
1134 fiy1 = _mm_add_ps(fiy1,ty);
1135 fiz1 = _mm_add_ps(fiz1,tz);
1137 fjx2 = _mm_add_ps(fjx2,tx);
1138 fjy2 = _mm_add_ps(fjy2,ty);
1139 fjz2 = _mm_add_ps(fjz2,tz);
1141 /**************************
1142 * CALCULATE INTERACTIONS *
1143 **************************/
1145 r20 = _mm_mul_ps(rsq20,rinv20);
1146 r20 = _mm_andnot_ps(dummy_mask,r20);
1148 /* EWALD ELECTROSTATICS */
1150 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1151 ewrt = _mm_mul_ps(r20,ewtabscale);
1152 ewitab = _mm_cvttps_epi32(ewrt);
1153 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1154 ewitab = _mm_slli_epi32(ewitab,2);
1155 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1156 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1157 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1158 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1159 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1160 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1161 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1162 velec = _mm_mul_ps(qq20,_mm_sub_ps(rinv20,velec));
1163 felec = _mm_mul_ps(_mm_mul_ps(qq20,rinv20),_mm_sub_ps(rinvsq20,felec));
1165 /* Update potential sum for this i atom from the interaction with this j atom. */
1166 velec = _mm_andnot_ps(dummy_mask,velec);
1167 velecsum = _mm_add_ps(velecsum,velec);
1171 fscal = _mm_andnot_ps(dummy_mask,fscal);
1173 /* Calculate temporary vectorial force */
1174 tx = _mm_mul_ps(fscal,dx20);
1175 ty = _mm_mul_ps(fscal,dy20);
1176 tz = _mm_mul_ps(fscal,dz20);
1178 /* Update vectorial force */
1179 fix2 = _mm_add_ps(fix2,tx);
1180 fiy2 = _mm_add_ps(fiy2,ty);
1181 fiz2 = _mm_add_ps(fiz2,tz);
1183 fjx0 = _mm_add_ps(fjx0,tx);
1184 fjy0 = _mm_add_ps(fjy0,ty);
1185 fjz0 = _mm_add_ps(fjz0,tz);
1187 /**************************
1188 * CALCULATE INTERACTIONS *
1189 **************************/
1191 r21 = _mm_mul_ps(rsq21,rinv21);
1192 r21 = _mm_andnot_ps(dummy_mask,r21);
1194 /* EWALD ELECTROSTATICS */
1196 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1197 ewrt = _mm_mul_ps(r21,ewtabscale);
1198 ewitab = _mm_cvttps_epi32(ewrt);
1199 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1200 ewitab = _mm_slli_epi32(ewitab,2);
1201 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1202 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1203 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1204 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1205 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1206 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1207 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1208 velec = _mm_mul_ps(qq21,_mm_sub_ps(rinv21,velec));
1209 felec = _mm_mul_ps(_mm_mul_ps(qq21,rinv21),_mm_sub_ps(rinvsq21,felec));
1211 /* Update potential sum for this i atom from the interaction with this j atom. */
1212 velec = _mm_andnot_ps(dummy_mask,velec);
1213 velecsum = _mm_add_ps(velecsum,velec);
1217 fscal = _mm_andnot_ps(dummy_mask,fscal);
1219 /* Calculate temporary vectorial force */
1220 tx = _mm_mul_ps(fscal,dx21);
1221 ty = _mm_mul_ps(fscal,dy21);
1222 tz = _mm_mul_ps(fscal,dz21);
1224 /* Update vectorial force */
1225 fix2 = _mm_add_ps(fix2,tx);
1226 fiy2 = _mm_add_ps(fiy2,ty);
1227 fiz2 = _mm_add_ps(fiz2,tz);
1229 fjx1 = _mm_add_ps(fjx1,tx);
1230 fjy1 = _mm_add_ps(fjy1,ty);
1231 fjz1 = _mm_add_ps(fjz1,tz);
1233 /**************************
1234 * CALCULATE INTERACTIONS *
1235 **************************/
1237 r22 = _mm_mul_ps(rsq22,rinv22);
1238 r22 = _mm_andnot_ps(dummy_mask,r22);
1240 /* EWALD ELECTROSTATICS */
1242 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1243 ewrt = _mm_mul_ps(r22,ewtabscale);
1244 ewitab = _mm_cvttps_epi32(ewrt);
1245 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1246 ewitab = _mm_slli_epi32(ewitab,2);
1247 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1248 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1249 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1250 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1251 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1252 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1253 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1254 velec = _mm_mul_ps(qq22,_mm_sub_ps(rinv22,velec));
1255 felec = _mm_mul_ps(_mm_mul_ps(qq22,rinv22),_mm_sub_ps(rinvsq22,felec));
1257 /* Update potential sum for this i atom from the interaction with this j atom. */
1258 velec = _mm_andnot_ps(dummy_mask,velec);
1259 velecsum = _mm_add_ps(velecsum,velec);
1263 fscal = _mm_andnot_ps(dummy_mask,fscal);
1265 /* Calculate temporary vectorial force */
1266 tx = _mm_mul_ps(fscal,dx22);
1267 ty = _mm_mul_ps(fscal,dy22);
1268 tz = _mm_mul_ps(fscal,dz22);
1270 /* Update vectorial force */
1271 fix2 = _mm_add_ps(fix2,tx);
1272 fiy2 = _mm_add_ps(fiy2,ty);
1273 fiz2 = _mm_add_ps(fiz2,tz);
1275 fjx2 = _mm_add_ps(fjx2,tx);
1276 fjy2 = _mm_add_ps(fjy2,ty);
1277 fjz2 = _mm_add_ps(fjz2,tz);
1279 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
1280 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
1281 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
1282 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
1284 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
1285 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1287 /* Inner loop uses 412 flops */
1290 /* End of innermost loop */
1292 gmx_mm_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1293 f+i_coord_offset,fshift+i_shift_offset);
1296 /* Update potential energies */
1297 gmx_mm_update_1pot_ps(velecsum,kernel_data->energygrp_elec+ggid);
1298 gmx_mm_update_1pot_ps(vvdwsum,kernel_data->energygrp_vdw+ggid);
1300 /* Increment number of inner iterations */
1301 inneriter += j_index_end - j_index_start;
1303 /* Outer loop uses 20 flops */
1306 /* Increment number of outer iterations */
1309 /* Update outer/inner flops */
1311 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_VF,outeriter*20 + inneriter*412);
1314 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwCSTab_GeomW3W3_F_sse2_single
1315 * Electrostatics interaction: Ewald
1316 * VdW interaction: CubicSplineTable
1317 * Geometry: Water3-Water3
1318 * Calculate force/pot: Force
1321 nb_kernel_ElecEw_VdwCSTab_GeomW3W3_F_sse2_single
1322 (t_nblist * gmx_restrict nlist,
1323 rvec * gmx_restrict xx,
1324 rvec * gmx_restrict ff,
1325 struct t_forcerec * gmx_restrict fr,
1326 t_mdatoms * gmx_restrict mdatoms,
1327 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
1328 t_nrnb * gmx_restrict nrnb)
1330 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
1331 * just 0 for non-waters.
1332 * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
1333 * jnr indices corresponding to data put in the four positions in the SIMD register.
1335 int i_shift_offset,i_coord_offset,outeriter,inneriter;
1336 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1337 int jnrA,jnrB,jnrC,jnrD;
1338 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
1339 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
1340 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
1341 real rcutoff_scalar;
1342 real *shiftvec,*fshift,*x,*f;
1343 real *fjptrA,*fjptrB,*fjptrC,*fjptrD;
1344 real scratch[4*DIM];
1345 __m128 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
1347 __m128 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
1349 __m128 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1351 __m128 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1352 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
1353 __m128 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
1354 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
1355 __m128 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1356 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
1357 __m128 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1358 __m128 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
1359 __m128 dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
1360 __m128 dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
1361 __m128 dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
1362 __m128 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1363 __m128 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1364 __m128 dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
1365 __m128 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1366 __m128 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1367 __m128 velec,felec,velecsum,facel,crf,krf,krf2;
1370 __m128 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
1373 __m128 one_sixth = _mm_set1_ps(1.0/6.0);
1374 __m128 one_twelfth = _mm_set1_ps(1.0/12.0);
1376 __m128i ifour = _mm_set1_epi32(4);
1377 __m128 rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
1380 __m128 ewtabscale,eweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
1382 __m128 dummy_mask,cutoff_mask;
1383 __m128 signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
1384 __m128 one = _mm_set1_ps(1.0);
1385 __m128 two = _mm_set1_ps(2.0);
1391 jindex = nlist->jindex;
1393 shiftidx = nlist->shift;
1395 shiftvec = fr->shift_vec[0];
1396 fshift = fr->fshift[0];
1397 facel = _mm_set1_ps(fr->ic->epsfac);
1398 charge = mdatoms->chargeA;
1399 nvdwtype = fr->ntype;
1400 vdwparam = fr->nbfp;
1401 vdwtype = mdatoms->typeA;
1403 vftab = kernel_data->table_vdw->data;
1404 vftabscale = _mm_set1_ps(kernel_data->table_vdw->scale);
1406 sh_ewald = _mm_set1_ps(fr->ic->sh_ewald);
1407 ewtab = fr->ic->tabq_coul_F;
1408 ewtabscale = _mm_set1_ps(fr->ic->tabq_scale);
1409 ewtabhalfspace = _mm_set1_ps(0.5/fr->ic->tabq_scale);
1411 /* Setup water-specific parameters */
1412 inr = nlist->iinr[0];
1413 iq0 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+0]));
1414 iq1 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
1415 iq2 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
1416 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
1418 jq0 = _mm_set1_ps(charge[inr+0]);
1419 jq1 = _mm_set1_ps(charge[inr+1]);
1420 jq2 = _mm_set1_ps(charge[inr+2]);
1421 vdwjidx0A = 2*vdwtype[inr+0];
1422 qq00 = _mm_mul_ps(iq0,jq0);
1423 c6_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A]);
1424 c12_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A+1]);
1425 qq01 = _mm_mul_ps(iq0,jq1);
1426 qq02 = _mm_mul_ps(iq0,jq2);
1427 qq10 = _mm_mul_ps(iq1,jq0);
1428 qq11 = _mm_mul_ps(iq1,jq1);
1429 qq12 = _mm_mul_ps(iq1,jq2);
1430 qq20 = _mm_mul_ps(iq2,jq0);
1431 qq21 = _mm_mul_ps(iq2,jq1);
1432 qq22 = _mm_mul_ps(iq2,jq2);
1434 /* Avoid stupid compiler warnings */
1435 jnrA = jnrB = jnrC = jnrD = 0;
1436 j_coord_offsetA = 0;
1437 j_coord_offsetB = 0;
1438 j_coord_offsetC = 0;
1439 j_coord_offsetD = 0;
1444 for(iidx=0;iidx<4*DIM;iidx++)
1446 scratch[iidx] = 0.0;
1449 /* Start outer loop over neighborlists */
1450 for(iidx=0; iidx<nri; iidx++)
1452 /* Load shift vector for this list */
1453 i_shift_offset = DIM*shiftidx[iidx];
1455 /* Load limits for loop over neighbors */
1456 j_index_start = jindex[iidx];
1457 j_index_end = jindex[iidx+1];
1459 /* Get outer coordinate index */
1461 i_coord_offset = DIM*inr;
1463 /* Load i particle coords and add shift vector */
1464 gmx_mm_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset,
1465 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
1467 fix0 = _mm_setzero_ps();
1468 fiy0 = _mm_setzero_ps();
1469 fiz0 = _mm_setzero_ps();
1470 fix1 = _mm_setzero_ps();
1471 fiy1 = _mm_setzero_ps();
1472 fiz1 = _mm_setzero_ps();
1473 fix2 = _mm_setzero_ps();
1474 fiy2 = _mm_setzero_ps();
1475 fiz2 = _mm_setzero_ps();
1477 /* Start inner kernel loop */
1478 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
1481 /* Get j neighbor index, and coordinate index */
1483 jnrB = jjnr[jidx+1];
1484 jnrC = jjnr[jidx+2];
1485 jnrD = jjnr[jidx+3];
1486 j_coord_offsetA = DIM*jnrA;
1487 j_coord_offsetB = DIM*jnrB;
1488 j_coord_offsetC = DIM*jnrC;
1489 j_coord_offsetD = DIM*jnrD;
1491 /* load j atom coordinates */
1492 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1493 x+j_coord_offsetC,x+j_coord_offsetD,
1494 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1496 /* Calculate displacement vector */
1497 dx00 = _mm_sub_ps(ix0,jx0);
1498 dy00 = _mm_sub_ps(iy0,jy0);
1499 dz00 = _mm_sub_ps(iz0,jz0);
1500 dx01 = _mm_sub_ps(ix0,jx1);
1501 dy01 = _mm_sub_ps(iy0,jy1);
1502 dz01 = _mm_sub_ps(iz0,jz1);
1503 dx02 = _mm_sub_ps(ix0,jx2);
1504 dy02 = _mm_sub_ps(iy0,jy2);
1505 dz02 = _mm_sub_ps(iz0,jz2);
1506 dx10 = _mm_sub_ps(ix1,jx0);
1507 dy10 = _mm_sub_ps(iy1,jy0);
1508 dz10 = _mm_sub_ps(iz1,jz0);
1509 dx11 = _mm_sub_ps(ix1,jx1);
1510 dy11 = _mm_sub_ps(iy1,jy1);
1511 dz11 = _mm_sub_ps(iz1,jz1);
1512 dx12 = _mm_sub_ps(ix1,jx2);
1513 dy12 = _mm_sub_ps(iy1,jy2);
1514 dz12 = _mm_sub_ps(iz1,jz2);
1515 dx20 = _mm_sub_ps(ix2,jx0);
1516 dy20 = _mm_sub_ps(iy2,jy0);
1517 dz20 = _mm_sub_ps(iz2,jz0);
1518 dx21 = _mm_sub_ps(ix2,jx1);
1519 dy21 = _mm_sub_ps(iy2,jy1);
1520 dz21 = _mm_sub_ps(iz2,jz1);
1521 dx22 = _mm_sub_ps(ix2,jx2);
1522 dy22 = _mm_sub_ps(iy2,jy2);
1523 dz22 = _mm_sub_ps(iz2,jz2);
1525 /* Calculate squared distance and things based on it */
1526 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
1527 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
1528 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
1529 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
1530 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1531 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1532 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
1533 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1534 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1536 rinv00 = sse2_invsqrt_f(rsq00);
1537 rinv01 = sse2_invsqrt_f(rsq01);
1538 rinv02 = sse2_invsqrt_f(rsq02);
1539 rinv10 = sse2_invsqrt_f(rsq10);
1540 rinv11 = sse2_invsqrt_f(rsq11);
1541 rinv12 = sse2_invsqrt_f(rsq12);
1542 rinv20 = sse2_invsqrt_f(rsq20);
1543 rinv21 = sse2_invsqrt_f(rsq21);
1544 rinv22 = sse2_invsqrt_f(rsq22);
1546 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
1547 rinvsq01 = _mm_mul_ps(rinv01,rinv01);
1548 rinvsq02 = _mm_mul_ps(rinv02,rinv02);
1549 rinvsq10 = _mm_mul_ps(rinv10,rinv10);
1550 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
1551 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
1552 rinvsq20 = _mm_mul_ps(rinv20,rinv20);
1553 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
1554 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
1556 fjx0 = _mm_setzero_ps();
1557 fjy0 = _mm_setzero_ps();
1558 fjz0 = _mm_setzero_ps();
1559 fjx1 = _mm_setzero_ps();
1560 fjy1 = _mm_setzero_ps();
1561 fjz1 = _mm_setzero_ps();
1562 fjx2 = _mm_setzero_ps();
1563 fjy2 = _mm_setzero_ps();
1564 fjz2 = _mm_setzero_ps();
1566 /**************************
1567 * CALCULATE INTERACTIONS *
1568 **************************/
1570 r00 = _mm_mul_ps(rsq00,rinv00);
1572 /* Calculate table index by multiplying r with table scale and truncate to integer */
1573 rt = _mm_mul_ps(r00,vftabscale);
1574 vfitab = _mm_cvttps_epi32(rt);
1575 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
1576 vfitab = _mm_slli_epi32(vfitab,3);
1578 /* EWALD ELECTROSTATICS */
1580 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1581 ewrt = _mm_mul_ps(r00,ewtabscale);
1582 ewitab = _mm_cvttps_epi32(ewrt);
1583 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1584 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1585 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1587 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1588 felec = _mm_mul_ps(_mm_mul_ps(qq00,rinv00),_mm_sub_ps(rinvsq00,felec));
1590 /* CUBIC SPLINE TABLE DISPERSION */
1591 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1592 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1593 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1594 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1595 _MM_TRANSPOSE4_PS(Y,F,G,H);
1596 Heps = _mm_mul_ps(vfeps,H);
1597 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1598 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1599 fvdw6 = _mm_mul_ps(c6_00,FF);
1601 /* CUBIC SPLINE TABLE REPULSION */
1602 vfitab = _mm_add_epi32(vfitab,ifour);
1603 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1604 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1605 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1606 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1607 _MM_TRANSPOSE4_PS(Y,F,G,H);
1608 Heps = _mm_mul_ps(vfeps,H);
1609 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1610 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1611 fvdw12 = _mm_mul_ps(c12_00,FF);
1612 fvdw = _mm_xor_ps(signbit,_mm_mul_ps(_mm_add_ps(fvdw6,fvdw12),_mm_mul_ps(vftabscale,rinv00)));
1614 fscal = _mm_add_ps(felec,fvdw);
1616 /* Calculate temporary vectorial force */
1617 tx = _mm_mul_ps(fscal,dx00);
1618 ty = _mm_mul_ps(fscal,dy00);
1619 tz = _mm_mul_ps(fscal,dz00);
1621 /* Update vectorial force */
1622 fix0 = _mm_add_ps(fix0,tx);
1623 fiy0 = _mm_add_ps(fiy0,ty);
1624 fiz0 = _mm_add_ps(fiz0,tz);
1626 fjx0 = _mm_add_ps(fjx0,tx);
1627 fjy0 = _mm_add_ps(fjy0,ty);
1628 fjz0 = _mm_add_ps(fjz0,tz);
1630 /**************************
1631 * CALCULATE INTERACTIONS *
1632 **************************/
1634 r01 = _mm_mul_ps(rsq01,rinv01);
1636 /* EWALD ELECTROSTATICS */
1638 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1639 ewrt = _mm_mul_ps(r01,ewtabscale);
1640 ewitab = _mm_cvttps_epi32(ewrt);
1641 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1642 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1643 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1645 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1646 felec = _mm_mul_ps(_mm_mul_ps(qq01,rinv01),_mm_sub_ps(rinvsq01,felec));
1650 /* Calculate temporary vectorial force */
1651 tx = _mm_mul_ps(fscal,dx01);
1652 ty = _mm_mul_ps(fscal,dy01);
1653 tz = _mm_mul_ps(fscal,dz01);
1655 /* Update vectorial force */
1656 fix0 = _mm_add_ps(fix0,tx);
1657 fiy0 = _mm_add_ps(fiy0,ty);
1658 fiz0 = _mm_add_ps(fiz0,tz);
1660 fjx1 = _mm_add_ps(fjx1,tx);
1661 fjy1 = _mm_add_ps(fjy1,ty);
1662 fjz1 = _mm_add_ps(fjz1,tz);
1664 /**************************
1665 * CALCULATE INTERACTIONS *
1666 **************************/
1668 r02 = _mm_mul_ps(rsq02,rinv02);
1670 /* EWALD ELECTROSTATICS */
1672 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1673 ewrt = _mm_mul_ps(r02,ewtabscale);
1674 ewitab = _mm_cvttps_epi32(ewrt);
1675 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1676 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1677 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1679 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1680 felec = _mm_mul_ps(_mm_mul_ps(qq02,rinv02),_mm_sub_ps(rinvsq02,felec));
1684 /* Calculate temporary vectorial force */
1685 tx = _mm_mul_ps(fscal,dx02);
1686 ty = _mm_mul_ps(fscal,dy02);
1687 tz = _mm_mul_ps(fscal,dz02);
1689 /* Update vectorial force */
1690 fix0 = _mm_add_ps(fix0,tx);
1691 fiy0 = _mm_add_ps(fiy0,ty);
1692 fiz0 = _mm_add_ps(fiz0,tz);
1694 fjx2 = _mm_add_ps(fjx2,tx);
1695 fjy2 = _mm_add_ps(fjy2,ty);
1696 fjz2 = _mm_add_ps(fjz2,tz);
1698 /**************************
1699 * CALCULATE INTERACTIONS *
1700 **************************/
1702 r10 = _mm_mul_ps(rsq10,rinv10);
1704 /* EWALD ELECTROSTATICS */
1706 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1707 ewrt = _mm_mul_ps(r10,ewtabscale);
1708 ewitab = _mm_cvttps_epi32(ewrt);
1709 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1710 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1711 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1713 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1714 felec = _mm_mul_ps(_mm_mul_ps(qq10,rinv10),_mm_sub_ps(rinvsq10,felec));
1718 /* Calculate temporary vectorial force */
1719 tx = _mm_mul_ps(fscal,dx10);
1720 ty = _mm_mul_ps(fscal,dy10);
1721 tz = _mm_mul_ps(fscal,dz10);
1723 /* Update vectorial force */
1724 fix1 = _mm_add_ps(fix1,tx);
1725 fiy1 = _mm_add_ps(fiy1,ty);
1726 fiz1 = _mm_add_ps(fiz1,tz);
1728 fjx0 = _mm_add_ps(fjx0,tx);
1729 fjy0 = _mm_add_ps(fjy0,ty);
1730 fjz0 = _mm_add_ps(fjz0,tz);
1732 /**************************
1733 * CALCULATE INTERACTIONS *
1734 **************************/
1736 r11 = _mm_mul_ps(rsq11,rinv11);
1738 /* EWALD ELECTROSTATICS */
1740 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1741 ewrt = _mm_mul_ps(r11,ewtabscale);
1742 ewitab = _mm_cvttps_epi32(ewrt);
1743 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1744 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1745 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1747 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1748 felec = _mm_mul_ps(_mm_mul_ps(qq11,rinv11),_mm_sub_ps(rinvsq11,felec));
1752 /* Calculate temporary vectorial force */
1753 tx = _mm_mul_ps(fscal,dx11);
1754 ty = _mm_mul_ps(fscal,dy11);
1755 tz = _mm_mul_ps(fscal,dz11);
1757 /* Update vectorial force */
1758 fix1 = _mm_add_ps(fix1,tx);
1759 fiy1 = _mm_add_ps(fiy1,ty);
1760 fiz1 = _mm_add_ps(fiz1,tz);
1762 fjx1 = _mm_add_ps(fjx1,tx);
1763 fjy1 = _mm_add_ps(fjy1,ty);
1764 fjz1 = _mm_add_ps(fjz1,tz);
1766 /**************************
1767 * CALCULATE INTERACTIONS *
1768 **************************/
1770 r12 = _mm_mul_ps(rsq12,rinv12);
1772 /* EWALD ELECTROSTATICS */
1774 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1775 ewrt = _mm_mul_ps(r12,ewtabscale);
1776 ewitab = _mm_cvttps_epi32(ewrt);
1777 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1778 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1779 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1781 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1782 felec = _mm_mul_ps(_mm_mul_ps(qq12,rinv12),_mm_sub_ps(rinvsq12,felec));
1786 /* Calculate temporary vectorial force */
1787 tx = _mm_mul_ps(fscal,dx12);
1788 ty = _mm_mul_ps(fscal,dy12);
1789 tz = _mm_mul_ps(fscal,dz12);
1791 /* Update vectorial force */
1792 fix1 = _mm_add_ps(fix1,tx);
1793 fiy1 = _mm_add_ps(fiy1,ty);
1794 fiz1 = _mm_add_ps(fiz1,tz);
1796 fjx2 = _mm_add_ps(fjx2,tx);
1797 fjy2 = _mm_add_ps(fjy2,ty);
1798 fjz2 = _mm_add_ps(fjz2,tz);
1800 /**************************
1801 * CALCULATE INTERACTIONS *
1802 **************************/
1804 r20 = _mm_mul_ps(rsq20,rinv20);
1806 /* EWALD ELECTROSTATICS */
1808 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1809 ewrt = _mm_mul_ps(r20,ewtabscale);
1810 ewitab = _mm_cvttps_epi32(ewrt);
1811 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1812 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1813 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1815 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1816 felec = _mm_mul_ps(_mm_mul_ps(qq20,rinv20),_mm_sub_ps(rinvsq20,felec));
1820 /* Calculate temporary vectorial force */
1821 tx = _mm_mul_ps(fscal,dx20);
1822 ty = _mm_mul_ps(fscal,dy20);
1823 tz = _mm_mul_ps(fscal,dz20);
1825 /* Update vectorial force */
1826 fix2 = _mm_add_ps(fix2,tx);
1827 fiy2 = _mm_add_ps(fiy2,ty);
1828 fiz2 = _mm_add_ps(fiz2,tz);
1830 fjx0 = _mm_add_ps(fjx0,tx);
1831 fjy0 = _mm_add_ps(fjy0,ty);
1832 fjz0 = _mm_add_ps(fjz0,tz);
1834 /**************************
1835 * CALCULATE INTERACTIONS *
1836 **************************/
1838 r21 = _mm_mul_ps(rsq21,rinv21);
1840 /* EWALD ELECTROSTATICS */
1842 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1843 ewrt = _mm_mul_ps(r21,ewtabscale);
1844 ewitab = _mm_cvttps_epi32(ewrt);
1845 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1846 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1847 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1849 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1850 felec = _mm_mul_ps(_mm_mul_ps(qq21,rinv21),_mm_sub_ps(rinvsq21,felec));
1854 /* Calculate temporary vectorial force */
1855 tx = _mm_mul_ps(fscal,dx21);
1856 ty = _mm_mul_ps(fscal,dy21);
1857 tz = _mm_mul_ps(fscal,dz21);
1859 /* Update vectorial force */
1860 fix2 = _mm_add_ps(fix2,tx);
1861 fiy2 = _mm_add_ps(fiy2,ty);
1862 fiz2 = _mm_add_ps(fiz2,tz);
1864 fjx1 = _mm_add_ps(fjx1,tx);
1865 fjy1 = _mm_add_ps(fjy1,ty);
1866 fjz1 = _mm_add_ps(fjz1,tz);
1868 /**************************
1869 * CALCULATE INTERACTIONS *
1870 **************************/
1872 r22 = _mm_mul_ps(rsq22,rinv22);
1874 /* EWALD ELECTROSTATICS */
1876 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1877 ewrt = _mm_mul_ps(r22,ewtabscale);
1878 ewitab = _mm_cvttps_epi32(ewrt);
1879 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1880 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1881 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1883 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1884 felec = _mm_mul_ps(_mm_mul_ps(qq22,rinv22),_mm_sub_ps(rinvsq22,felec));
1888 /* Calculate temporary vectorial force */
1889 tx = _mm_mul_ps(fscal,dx22);
1890 ty = _mm_mul_ps(fscal,dy22);
1891 tz = _mm_mul_ps(fscal,dz22);
1893 /* Update vectorial force */
1894 fix2 = _mm_add_ps(fix2,tx);
1895 fiy2 = _mm_add_ps(fiy2,ty);
1896 fiz2 = _mm_add_ps(fiz2,tz);
1898 fjx2 = _mm_add_ps(fjx2,tx);
1899 fjy2 = _mm_add_ps(fjy2,ty);
1900 fjz2 = _mm_add_ps(fjz2,tz);
1902 fjptrA = f+j_coord_offsetA;
1903 fjptrB = f+j_coord_offsetB;
1904 fjptrC = f+j_coord_offsetC;
1905 fjptrD = f+j_coord_offsetD;
1907 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
1908 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1910 /* Inner loop uses 350 flops */
1913 if(jidx<j_index_end)
1916 /* Get j neighbor index, and coordinate index */
1917 jnrlistA = jjnr[jidx];
1918 jnrlistB = jjnr[jidx+1];
1919 jnrlistC = jjnr[jidx+2];
1920 jnrlistD = jjnr[jidx+3];
1921 /* Sign of each element will be negative for non-real atoms.
1922 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
1923 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
1925 dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
1926 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
1927 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
1928 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
1929 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
1930 j_coord_offsetA = DIM*jnrA;
1931 j_coord_offsetB = DIM*jnrB;
1932 j_coord_offsetC = DIM*jnrC;
1933 j_coord_offsetD = DIM*jnrD;
1935 /* load j atom coordinates */
1936 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1937 x+j_coord_offsetC,x+j_coord_offsetD,
1938 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1940 /* Calculate displacement vector */
1941 dx00 = _mm_sub_ps(ix0,jx0);
1942 dy00 = _mm_sub_ps(iy0,jy0);
1943 dz00 = _mm_sub_ps(iz0,jz0);
1944 dx01 = _mm_sub_ps(ix0,jx1);
1945 dy01 = _mm_sub_ps(iy0,jy1);
1946 dz01 = _mm_sub_ps(iz0,jz1);
1947 dx02 = _mm_sub_ps(ix0,jx2);
1948 dy02 = _mm_sub_ps(iy0,jy2);
1949 dz02 = _mm_sub_ps(iz0,jz2);
1950 dx10 = _mm_sub_ps(ix1,jx0);
1951 dy10 = _mm_sub_ps(iy1,jy0);
1952 dz10 = _mm_sub_ps(iz1,jz0);
1953 dx11 = _mm_sub_ps(ix1,jx1);
1954 dy11 = _mm_sub_ps(iy1,jy1);
1955 dz11 = _mm_sub_ps(iz1,jz1);
1956 dx12 = _mm_sub_ps(ix1,jx2);
1957 dy12 = _mm_sub_ps(iy1,jy2);
1958 dz12 = _mm_sub_ps(iz1,jz2);
1959 dx20 = _mm_sub_ps(ix2,jx0);
1960 dy20 = _mm_sub_ps(iy2,jy0);
1961 dz20 = _mm_sub_ps(iz2,jz0);
1962 dx21 = _mm_sub_ps(ix2,jx1);
1963 dy21 = _mm_sub_ps(iy2,jy1);
1964 dz21 = _mm_sub_ps(iz2,jz1);
1965 dx22 = _mm_sub_ps(ix2,jx2);
1966 dy22 = _mm_sub_ps(iy2,jy2);
1967 dz22 = _mm_sub_ps(iz2,jz2);
1969 /* Calculate squared distance and things based on it */
1970 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
1971 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
1972 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
1973 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
1974 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1975 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1976 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
1977 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1978 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1980 rinv00 = sse2_invsqrt_f(rsq00);
1981 rinv01 = sse2_invsqrt_f(rsq01);
1982 rinv02 = sse2_invsqrt_f(rsq02);
1983 rinv10 = sse2_invsqrt_f(rsq10);
1984 rinv11 = sse2_invsqrt_f(rsq11);
1985 rinv12 = sse2_invsqrt_f(rsq12);
1986 rinv20 = sse2_invsqrt_f(rsq20);
1987 rinv21 = sse2_invsqrt_f(rsq21);
1988 rinv22 = sse2_invsqrt_f(rsq22);
1990 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
1991 rinvsq01 = _mm_mul_ps(rinv01,rinv01);
1992 rinvsq02 = _mm_mul_ps(rinv02,rinv02);
1993 rinvsq10 = _mm_mul_ps(rinv10,rinv10);
1994 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
1995 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
1996 rinvsq20 = _mm_mul_ps(rinv20,rinv20);
1997 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
1998 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
2000 fjx0 = _mm_setzero_ps();
2001 fjy0 = _mm_setzero_ps();
2002 fjz0 = _mm_setzero_ps();
2003 fjx1 = _mm_setzero_ps();
2004 fjy1 = _mm_setzero_ps();
2005 fjz1 = _mm_setzero_ps();
2006 fjx2 = _mm_setzero_ps();
2007 fjy2 = _mm_setzero_ps();
2008 fjz2 = _mm_setzero_ps();
2010 /**************************
2011 * CALCULATE INTERACTIONS *
2012 **************************/
2014 r00 = _mm_mul_ps(rsq00,rinv00);
2015 r00 = _mm_andnot_ps(dummy_mask,r00);
2017 /* Calculate table index by multiplying r with table scale and truncate to integer */
2018 rt = _mm_mul_ps(r00,vftabscale);
2019 vfitab = _mm_cvttps_epi32(rt);
2020 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
2021 vfitab = _mm_slli_epi32(vfitab,3);
2023 /* EWALD ELECTROSTATICS */
2025 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2026 ewrt = _mm_mul_ps(r00,ewtabscale);
2027 ewitab = _mm_cvttps_epi32(ewrt);
2028 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2029 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2030 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2032 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2033 felec = _mm_mul_ps(_mm_mul_ps(qq00,rinv00),_mm_sub_ps(rinvsq00,felec));
2035 /* CUBIC SPLINE TABLE DISPERSION */
2036 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
2037 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
2038 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
2039 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
2040 _MM_TRANSPOSE4_PS(Y,F,G,H);
2041 Heps = _mm_mul_ps(vfeps,H);
2042 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
2043 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
2044 fvdw6 = _mm_mul_ps(c6_00,FF);
2046 /* CUBIC SPLINE TABLE REPULSION */
2047 vfitab = _mm_add_epi32(vfitab,ifour);
2048 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
2049 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
2050 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
2051 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
2052 _MM_TRANSPOSE4_PS(Y,F,G,H);
2053 Heps = _mm_mul_ps(vfeps,H);
2054 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
2055 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
2056 fvdw12 = _mm_mul_ps(c12_00,FF);
2057 fvdw = _mm_xor_ps(signbit,_mm_mul_ps(_mm_add_ps(fvdw6,fvdw12),_mm_mul_ps(vftabscale,rinv00)));
2059 fscal = _mm_add_ps(felec,fvdw);
2061 fscal = _mm_andnot_ps(dummy_mask,fscal);
2063 /* Calculate temporary vectorial force */
2064 tx = _mm_mul_ps(fscal,dx00);
2065 ty = _mm_mul_ps(fscal,dy00);
2066 tz = _mm_mul_ps(fscal,dz00);
2068 /* Update vectorial force */
2069 fix0 = _mm_add_ps(fix0,tx);
2070 fiy0 = _mm_add_ps(fiy0,ty);
2071 fiz0 = _mm_add_ps(fiz0,tz);
2073 fjx0 = _mm_add_ps(fjx0,tx);
2074 fjy0 = _mm_add_ps(fjy0,ty);
2075 fjz0 = _mm_add_ps(fjz0,tz);
2077 /**************************
2078 * CALCULATE INTERACTIONS *
2079 **************************/
2081 r01 = _mm_mul_ps(rsq01,rinv01);
2082 r01 = _mm_andnot_ps(dummy_mask,r01);
2084 /* EWALD ELECTROSTATICS */
2086 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2087 ewrt = _mm_mul_ps(r01,ewtabscale);
2088 ewitab = _mm_cvttps_epi32(ewrt);
2089 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2090 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2091 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2093 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2094 felec = _mm_mul_ps(_mm_mul_ps(qq01,rinv01),_mm_sub_ps(rinvsq01,felec));
2098 fscal = _mm_andnot_ps(dummy_mask,fscal);
2100 /* Calculate temporary vectorial force */
2101 tx = _mm_mul_ps(fscal,dx01);
2102 ty = _mm_mul_ps(fscal,dy01);
2103 tz = _mm_mul_ps(fscal,dz01);
2105 /* Update vectorial force */
2106 fix0 = _mm_add_ps(fix0,tx);
2107 fiy0 = _mm_add_ps(fiy0,ty);
2108 fiz0 = _mm_add_ps(fiz0,tz);
2110 fjx1 = _mm_add_ps(fjx1,tx);
2111 fjy1 = _mm_add_ps(fjy1,ty);
2112 fjz1 = _mm_add_ps(fjz1,tz);
2114 /**************************
2115 * CALCULATE INTERACTIONS *
2116 **************************/
2118 r02 = _mm_mul_ps(rsq02,rinv02);
2119 r02 = _mm_andnot_ps(dummy_mask,r02);
2121 /* EWALD ELECTROSTATICS */
2123 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2124 ewrt = _mm_mul_ps(r02,ewtabscale);
2125 ewitab = _mm_cvttps_epi32(ewrt);
2126 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2127 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2128 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2130 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2131 felec = _mm_mul_ps(_mm_mul_ps(qq02,rinv02),_mm_sub_ps(rinvsq02,felec));
2135 fscal = _mm_andnot_ps(dummy_mask,fscal);
2137 /* Calculate temporary vectorial force */
2138 tx = _mm_mul_ps(fscal,dx02);
2139 ty = _mm_mul_ps(fscal,dy02);
2140 tz = _mm_mul_ps(fscal,dz02);
2142 /* Update vectorial force */
2143 fix0 = _mm_add_ps(fix0,tx);
2144 fiy0 = _mm_add_ps(fiy0,ty);
2145 fiz0 = _mm_add_ps(fiz0,tz);
2147 fjx2 = _mm_add_ps(fjx2,tx);
2148 fjy2 = _mm_add_ps(fjy2,ty);
2149 fjz2 = _mm_add_ps(fjz2,tz);
2151 /**************************
2152 * CALCULATE INTERACTIONS *
2153 **************************/
2155 r10 = _mm_mul_ps(rsq10,rinv10);
2156 r10 = _mm_andnot_ps(dummy_mask,r10);
2158 /* EWALD ELECTROSTATICS */
2160 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2161 ewrt = _mm_mul_ps(r10,ewtabscale);
2162 ewitab = _mm_cvttps_epi32(ewrt);
2163 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2164 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2165 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2167 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2168 felec = _mm_mul_ps(_mm_mul_ps(qq10,rinv10),_mm_sub_ps(rinvsq10,felec));
2172 fscal = _mm_andnot_ps(dummy_mask,fscal);
2174 /* Calculate temporary vectorial force */
2175 tx = _mm_mul_ps(fscal,dx10);
2176 ty = _mm_mul_ps(fscal,dy10);
2177 tz = _mm_mul_ps(fscal,dz10);
2179 /* Update vectorial force */
2180 fix1 = _mm_add_ps(fix1,tx);
2181 fiy1 = _mm_add_ps(fiy1,ty);
2182 fiz1 = _mm_add_ps(fiz1,tz);
2184 fjx0 = _mm_add_ps(fjx0,tx);
2185 fjy0 = _mm_add_ps(fjy0,ty);
2186 fjz0 = _mm_add_ps(fjz0,tz);
2188 /**************************
2189 * CALCULATE INTERACTIONS *
2190 **************************/
2192 r11 = _mm_mul_ps(rsq11,rinv11);
2193 r11 = _mm_andnot_ps(dummy_mask,r11);
2195 /* EWALD ELECTROSTATICS */
2197 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2198 ewrt = _mm_mul_ps(r11,ewtabscale);
2199 ewitab = _mm_cvttps_epi32(ewrt);
2200 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2201 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2202 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2204 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2205 felec = _mm_mul_ps(_mm_mul_ps(qq11,rinv11),_mm_sub_ps(rinvsq11,felec));
2209 fscal = _mm_andnot_ps(dummy_mask,fscal);
2211 /* Calculate temporary vectorial force */
2212 tx = _mm_mul_ps(fscal,dx11);
2213 ty = _mm_mul_ps(fscal,dy11);
2214 tz = _mm_mul_ps(fscal,dz11);
2216 /* Update vectorial force */
2217 fix1 = _mm_add_ps(fix1,tx);
2218 fiy1 = _mm_add_ps(fiy1,ty);
2219 fiz1 = _mm_add_ps(fiz1,tz);
2221 fjx1 = _mm_add_ps(fjx1,tx);
2222 fjy1 = _mm_add_ps(fjy1,ty);
2223 fjz1 = _mm_add_ps(fjz1,tz);
2225 /**************************
2226 * CALCULATE INTERACTIONS *
2227 **************************/
2229 r12 = _mm_mul_ps(rsq12,rinv12);
2230 r12 = _mm_andnot_ps(dummy_mask,r12);
2232 /* EWALD ELECTROSTATICS */
2234 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2235 ewrt = _mm_mul_ps(r12,ewtabscale);
2236 ewitab = _mm_cvttps_epi32(ewrt);
2237 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2238 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2239 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2241 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2242 felec = _mm_mul_ps(_mm_mul_ps(qq12,rinv12),_mm_sub_ps(rinvsq12,felec));
2246 fscal = _mm_andnot_ps(dummy_mask,fscal);
2248 /* Calculate temporary vectorial force */
2249 tx = _mm_mul_ps(fscal,dx12);
2250 ty = _mm_mul_ps(fscal,dy12);
2251 tz = _mm_mul_ps(fscal,dz12);
2253 /* Update vectorial force */
2254 fix1 = _mm_add_ps(fix1,tx);
2255 fiy1 = _mm_add_ps(fiy1,ty);
2256 fiz1 = _mm_add_ps(fiz1,tz);
2258 fjx2 = _mm_add_ps(fjx2,tx);
2259 fjy2 = _mm_add_ps(fjy2,ty);
2260 fjz2 = _mm_add_ps(fjz2,tz);
2262 /**************************
2263 * CALCULATE INTERACTIONS *
2264 **************************/
2266 r20 = _mm_mul_ps(rsq20,rinv20);
2267 r20 = _mm_andnot_ps(dummy_mask,r20);
2269 /* EWALD ELECTROSTATICS */
2271 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2272 ewrt = _mm_mul_ps(r20,ewtabscale);
2273 ewitab = _mm_cvttps_epi32(ewrt);
2274 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2275 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2276 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2278 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2279 felec = _mm_mul_ps(_mm_mul_ps(qq20,rinv20),_mm_sub_ps(rinvsq20,felec));
2283 fscal = _mm_andnot_ps(dummy_mask,fscal);
2285 /* Calculate temporary vectorial force */
2286 tx = _mm_mul_ps(fscal,dx20);
2287 ty = _mm_mul_ps(fscal,dy20);
2288 tz = _mm_mul_ps(fscal,dz20);
2290 /* Update vectorial force */
2291 fix2 = _mm_add_ps(fix2,tx);
2292 fiy2 = _mm_add_ps(fiy2,ty);
2293 fiz2 = _mm_add_ps(fiz2,tz);
2295 fjx0 = _mm_add_ps(fjx0,tx);
2296 fjy0 = _mm_add_ps(fjy0,ty);
2297 fjz0 = _mm_add_ps(fjz0,tz);
2299 /**************************
2300 * CALCULATE INTERACTIONS *
2301 **************************/
2303 r21 = _mm_mul_ps(rsq21,rinv21);
2304 r21 = _mm_andnot_ps(dummy_mask,r21);
2306 /* EWALD ELECTROSTATICS */
2308 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2309 ewrt = _mm_mul_ps(r21,ewtabscale);
2310 ewitab = _mm_cvttps_epi32(ewrt);
2311 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2312 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2313 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2315 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2316 felec = _mm_mul_ps(_mm_mul_ps(qq21,rinv21),_mm_sub_ps(rinvsq21,felec));
2320 fscal = _mm_andnot_ps(dummy_mask,fscal);
2322 /* Calculate temporary vectorial force */
2323 tx = _mm_mul_ps(fscal,dx21);
2324 ty = _mm_mul_ps(fscal,dy21);
2325 tz = _mm_mul_ps(fscal,dz21);
2327 /* Update vectorial force */
2328 fix2 = _mm_add_ps(fix2,tx);
2329 fiy2 = _mm_add_ps(fiy2,ty);
2330 fiz2 = _mm_add_ps(fiz2,tz);
2332 fjx1 = _mm_add_ps(fjx1,tx);
2333 fjy1 = _mm_add_ps(fjy1,ty);
2334 fjz1 = _mm_add_ps(fjz1,tz);
2336 /**************************
2337 * CALCULATE INTERACTIONS *
2338 **************************/
2340 r22 = _mm_mul_ps(rsq22,rinv22);
2341 r22 = _mm_andnot_ps(dummy_mask,r22);
2343 /* EWALD ELECTROSTATICS */
2345 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2346 ewrt = _mm_mul_ps(r22,ewtabscale);
2347 ewitab = _mm_cvttps_epi32(ewrt);
2348 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2349 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2350 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2352 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2353 felec = _mm_mul_ps(_mm_mul_ps(qq22,rinv22),_mm_sub_ps(rinvsq22,felec));
2357 fscal = _mm_andnot_ps(dummy_mask,fscal);
2359 /* Calculate temporary vectorial force */
2360 tx = _mm_mul_ps(fscal,dx22);
2361 ty = _mm_mul_ps(fscal,dy22);
2362 tz = _mm_mul_ps(fscal,dz22);
2364 /* Update vectorial force */
2365 fix2 = _mm_add_ps(fix2,tx);
2366 fiy2 = _mm_add_ps(fiy2,ty);
2367 fiz2 = _mm_add_ps(fiz2,tz);
2369 fjx2 = _mm_add_ps(fjx2,tx);
2370 fjy2 = _mm_add_ps(fjy2,ty);
2371 fjz2 = _mm_add_ps(fjz2,tz);
2373 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
2374 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
2375 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
2376 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
2378 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
2379 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
2381 /* Inner loop uses 359 flops */
2384 /* End of innermost loop */
2386 gmx_mm_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
2387 f+i_coord_offset,fshift+i_shift_offset);
2389 /* Increment number of inner iterations */
2390 inneriter += j_index_end - j_index_start;
2392 /* Outer loop uses 18 flops */
2395 /* Increment number of outer iterations */
2398 /* Update outer/inner flops */
2400 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_F,outeriter*18 + inneriter*359);