Added option to gmx nmeig to print ZPE.
[alexxy/gromacs.git] / src / gromacs / gmxlib / nonbonded / nb_kernel_sse2_single / nb_kernel_ElecCoul_VdwNone_GeomW4W4_sse2_single.c
1 /*
2  * This file is part of the GROMACS molecular simulation package.
3  *
4  * Copyright (c) 2012,2013,2014,2015,2017, by the GROMACS development team, led by
5  * Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
6  * and including many others, as listed in the AUTHORS file in the
7  * top-level source directory and at http://www.gromacs.org.
8  *
9  * GROMACS is free software; you can redistribute it and/or
10  * modify it under the terms of the GNU Lesser General Public License
11  * as published by the Free Software Foundation; either version 2.1
12  * of the License, or (at your option) any later version.
13  *
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35 /*
36  * Note: this file was generated by the GROMACS sse2_single kernel generator.
37  */
38 #include "gmxpre.h"
39
40 #include "config.h"
41
42 #include <math.h>
43
44 #include "../nb_kernel.h"
45 #include "gromacs/gmxlib/nrnb.h"
46
47 #include "kernelutil_x86_sse2_single.h"
48
49 /*
50  * Gromacs nonbonded kernel:   nb_kernel_ElecCoul_VdwNone_GeomW4W4_VF_sse2_single
51  * Electrostatics interaction: Coulomb
52  * VdW interaction:            None
53  * Geometry:                   Water4-Water4
54  * Calculate force/pot:        PotentialAndForce
55  */
56 void
57 nb_kernel_ElecCoul_VdwNone_GeomW4W4_VF_sse2_single
58                     (t_nblist                    * gmx_restrict       nlist,
59                      rvec                        * gmx_restrict          xx,
60                      rvec                        * gmx_restrict          ff,
61                      struct t_forcerec           * gmx_restrict          fr,
62                      t_mdatoms                   * gmx_restrict     mdatoms,
63                      nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
64                      t_nrnb                      * gmx_restrict        nrnb)
65 {
66     /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or 
67      * just 0 for non-waters.
68      * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
69      * jnr indices corresponding to data put in the four positions in the SIMD register.
70      */
71     int              i_shift_offset,i_coord_offset,outeriter,inneriter;
72     int              j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
73     int              jnrA,jnrB,jnrC,jnrD;
74     int              jnrlistA,jnrlistB,jnrlistC,jnrlistD;
75     int              j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
76     int              *iinr,*jindex,*jjnr,*shiftidx,*gid;
77     real             rcutoff_scalar;
78     real             *shiftvec,*fshift,*x,*f;
79     real             *fjptrA,*fjptrB,*fjptrC,*fjptrD;
80     real             scratch[4*DIM];
81     __m128           tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
82     int              vdwioffset1;
83     __m128           ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
84     int              vdwioffset2;
85     __m128           ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
86     int              vdwioffset3;
87     __m128           ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
88     int              vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
89     __m128           jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
90     int              vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
91     __m128           jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
92     int              vdwjidx3A,vdwjidx3B,vdwjidx3C,vdwjidx3D;
93     __m128           jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
94     __m128           dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
95     __m128           dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
96     __m128           dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
97     __m128           dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
98     __m128           dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
99     __m128           dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
100     __m128           dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
101     __m128           dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
102     __m128           dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
103     __m128           velec,felec,velecsum,facel,crf,krf,krf2;
104     real             *charge;
105     __m128           dummy_mask,cutoff_mask;
106     __m128           signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
107     __m128           one     = _mm_set1_ps(1.0);
108     __m128           two     = _mm_set1_ps(2.0);
109     x                = xx[0];
110     f                = ff[0];
111
112     nri              = nlist->nri;
113     iinr             = nlist->iinr;
114     jindex           = nlist->jindex;
115     jjnr             = nlist->jjnr;
116     shiftidx         = nlist->shift;
117     gid              = nlist->gid;
118     shiftvec         = fr->shift_vec[0];
119     fshift           = fr->fshift[0];
120     facel            = _mm_set1_ps(fr->ic->epsfac);
121     charge           = mdatoms->chargeA;
122
123     /* Setup water-specific parameters */
124     inr              = nlist->iinr[0];
125     iq1              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
126     iq2              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
127     iq3              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+3]));
128
129     jq1              = _mm_set1_ps(charge[inr+1]);
130     jq2              = _mm_set1_ps(charge[inr+2]);
131     jq3              = _mm_set1_ps(charge[inr+3]);
132     qq11             = _mm_mul_ps(iq1,jq1);
133     qq12             = _mm_mul_ps(iq1,jq2);
134     qq13             = _mm_mul_ps(iq1,jq3);
135     qq21             = _mm_mul_ps(iq2,jq1);
136     qq22             = _mm_mul_ps(iq2,jq2);
137     qq23             = _mm_mul_ps(iq2,jq3);
138     qq31             = _mm_mul_ps(iq3,jq1);
139     qq32             = _mm_mul_ps(iq3,jq2);
140     qq33             = _mm_mul_ps(iq3,jq3);
141
142     /* Avoid stupid compiler warnings */
143     jnrA = jnrB = jnrC = jnrD = 0;
144     j_coord_offsetA = 0;
145     j_coord_offsetB = 0;
146     j_coord_offsetC = 0;
147     j_coord_offsetD = 0;
148
149     outeriter        = 0;
150     inneriter        = 0;
151
152     for(iidx=0;iidx<4*DIM;iidx++)
153     {
154         scratch[iidx] = 0.0;
155     }  
156
157     /* Start outer loop over neighborlists */
158     for(iidx=0; iidx<nri; iidx++)
159     {
160         /* Load shift vector for this list */
161         i_shift_offset   = DIM*shiftidx[iidx];
162
163         /* Load limits for loop over neighbors */
164         j_index_start    = jindex[iidx];
165         j_index_end      = jindex[iidx+1];
166
167         /* Get outer coordinate index */
168         inr              = iinr[iidx];
169         i_coord_offset   = DIM*inr;
170
171         /* Load i particle coords and add shift vector */
172         gmx_mm_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset+DIM,
173                                                  &ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
174         
175         fix1             = _mm_setzero_ps();
176         fiy1             = _mm_setzero_ps();
177         fiz1             = _mm_setzero_ps();
178         fix2             = _mm_setzero_ps();
179         fiy2             = _mm_setzero_ps();
180         fiz2             = _mm_setzero_ps();
181         fix3             = _mm_setzero_ps();
182         fiy3             = _mm_setzero_ps();
183         fiz3             = _mm_setzero_ps();
184
185         /* Reset potential sums */
186         velecsum         = _mm_setzero_ps();
187
188         /* Start inner kernel loop */
189         for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
190         {
191
192             /* Get j neighbor index, and coordinate index */
193             jnrA             = jjnr[jidx];
194             jnrB             = jjnr[jidx+1];
195             jnrC             = jjnr[jidx+2];
196             jnrD             = jjnr[jidx+3];
197             j_coord_offsetA  = DIM*jnrA;
198             j_coord_offsetB  = DIM*jnrB;
199             j_coord_offsetC  = DIM*jnrC;
200             j_coord_offsetD  = DIM*jnrD;
201
202             /* load j atom coordinates */
203             gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
204                                               x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
205                                               &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
206
207             /* Calculate displacement vector */
208             dx11             = _mm_sub_ps(ix1,jx1);
209             dy11             = _mm_sub_ps(iy1,jy1);
210             dz11             = _mm_sub_ps(iz1,jz1);
211             dx12             = _mm_sub_ps(ix1,jx2);
212             dy12             = _mm_sub_ps(iy1,jy2);
213             dz12             = _mm_sub_ps(iz1,jz2);
214             dx13             = _mm_sub_ps(ix1,jx3);
215             dy13             = _mm_sub_ps(iy1,jy3);
216             dz13             = _mm_sub_ps(iz1,jz3);
217             dx21             = _mm_sub_ps(ix2,jx1);
218             dy21             = _mm_sub_ps(iy2,jy1);
219             dz21             = _mm_sub_ps(iz2,jz1);
220             dx22             = _mm_sub_ps(ix2,jx2);
221             dy22             = _mm_sub_ps(iy2,jy2);
222             dz22             = _mm_sub_ps(iz2,jz2);
223             dx23             = _mm_sub_ps(ix2,jx3);
224             dy23             = _mm_sub_ps(iy2,jy3);
225             dz23             = _mm_sub_ps(iz2,jz3);
226             dx31             = _mm_sub_ps(ix3,jx1);
227             dy31             = _mm_sub_ps(iy3,jy1);
228             dz31             = _mm_sub_ps(iz3,jz1);
229             dx32             = _mm_sub_ps(ix3,jx2);
230             dy32             = _mm_sub_ps(iy3,jy2);
231             dz32             = _mm_sub_ps(iz3,jz2);
232             dx33             = _mm_sub_ps(ix3,jx3);
233             dy33             = _mm_sub_ps(iy3,jy3);
234             dz33             = _mm_sub_ps(iz3,jz3);
235
236             /* Calculate squared distance and things based on it */
237             rsq11            = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
238             rsq12            = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
239             rsq13            = gmx_mm_calc_rsq_ps(dx13,dy13,dz13);
240             rsq21            = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
241             rsq22            = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
242             rsq23            = gmx_mm_calc_rsq_ps(dx23,dy23,dz23);
243             rsq31            = gmx_mm_calc_rsq_ps(dx31,dy31,dz31);
244             rsq32            = gmx_mm_calc_rsq_ps(dx32,dy32,dz32);
245             rsq33            = gmx_mm_calc_rsq_ps(dx33,dy33,dz33);
246
247             rinv11           = sse2_invsqrt_f(rsq11);
248             rinv12           = sse2_invsqrt_f(rsq12);
249             rinv13           = sse2_invsqrt_f(rsq13);
250             rinv21           = sse2_invsqrt_f(rsq21);
251             rinv22           = sse2_invsqrt_f(rsq22);
252             rinv23           = sse2_invsqrt_f(rsq23);
253             rinv31           = sse2_invsqrt_f(rsq31);
254             rinv32           = sse2_invsqrt_f(rsq32);
255             rinv33           = sse2_invsqrt_f(rsq33);
256
257             rinvsq11         = _mm_mul_ps(rinv11,rinv11);
258             rinvsq12         = _mm_mul_ps(rinv12,rinv12);
259             rinvsq13         = _mm_mul_ps(rinv13,rinv13);
260             rinvsq21         = _mm_mul_ps(rinv21,rinv21);
261             rinvsq22         = _mm_mul_ps(rinv22,rinv22);
262             rinvsq23         = _mm_mul_ps(rinv23,rinv23);
263             rinvsq31         = _mm_mul_ps(rinv31,rinv31);
264             rinvsq32         = _mm_mul_ps(rinv32,rinv32);
265             rinvsq33         = _mm_mul_ps(rinv33,rinv33);
266
267             fjx1             = _mm_setzero_ps();
268             fjy1             = _mm_setzero_ps();
269             fjz1             = _mm_setzero_ps();
270             fjx2             = _mm_setzero_ps();
271             fjy2             = _mm_setzero_ps();
272             fjz2             = _mm_setzero_ps();
273             fjx3             = _mm_setzero_ps();
274             fjy3             = _mm_setzero_ps();
275             fjz3             = _mm_setzero_ps();
276
277             /**************************
278              * CALCULATE INTERACTIONS *
279              **************************/
280
281             /* COULOMB ELECTROSTATICS */
282             velec            = _mm_mul_ps(qq11,rinv11);
283             felec            = _mm_mul_ps(velec,rinvsq11);
284
285             /* Update potential sum for this i atom from the interaction with this j atom. */
286             velecsum         = _mm_add_ps(velecsum,velec);
287
288             fscal            = felec;
289
290             /* Calculate temporary vectorial force */
291             tx               = _mm_mul_ps(fscal,dx11);
292             ty               = _mm_mul_ps(fscal,dy11);
293             tz               = _mm_mul_ps(fscal,dz11);
294
295             /* Update vectorial force */
296             fix1             = _mm_add_ps(fix1,tx);
297             fiy1             = _mm_add_ps(fiy1,ty);
298             fiz1             = _mm_add_ps(fiz1,tz);
299
300             fjx1             = _mm_add_ps(fjx1,tx);
301             fjy1             = _mm_add_ps(fjy1,ty);
302             fjz1             = _mm_add_ps(fjz1,tz);
303             
304             /**************************
305              * CALCULATE INTERACTIONS *
306              **************************/
307
308             /* COULOMB ELECTROSTATICS */
309             velec            = _mm_mul_ps(qq12,rinv12);
310             felec            = _mm_mul_ps(velec,rinvsq12);
311
312             /* Update potential sum for this i atom from the interaction with this j atom. */
313             velecsum         = _mm_add_ps(velecsum,velec);
314
315             fscal            = felec;
316
317             /* Calculate temporary vectorial force */
318             tx               = _mm_mul_ps(fscal,dx12);
319             ty               = _mm_mul_ps(fscal,dy12);
320             tz               = _mm_mul_ps(fscal,dz12);
321
322             /* Update vectorial force */
323             fix1             = _mm_add_ps(fix1,tx);
324             fiy1             = _mm_add_ps(fiy1,ty);
325             fiz1             = _mm_add_ps(fiz1,tz);
326
327             fjx2             = _mm_add_ps(fjx2,tx);
328             fjy2             = _mm_add_ps(fjy2,ty);
329             fjz2             = _mm_add_ps(fjz2,tz);
330             
331             /**************************
332              * CALCULATE INTERACTIONS *
333              **************************/
334
335             /* COULOMB ELECTROSTATICS */
336             velec            = _mm_mul_ps(qq13,rinv13);
337             felec            = _mm_mul_ps(velec,rinvsq13);
338
339             /* Update potential sum for this i atom from the interaction with this j atom. */
340             velecsum         = _mm_add_ps(velecsum,velec);
341
342             fscal            = felec;
343
344             /* Calculate temporary vectorial force */
345             tx               = _mm_mul_ps(fscal,dx13);
346             ty               = _mm_mul_ps(fscal,dy13);
347             tz               = _mm_mul_ps(fscal,dz13);
348
349             /* Update vectorial force */
350             fix1             = _mm_add_ps(fix1,tx);
351             fiy1             = _mm_add_ps(fiy1,ty);
352             fiz1             = _mm_add_ps(fiz1,tz);
353
354             fjx3             = _mm_add_ps(fjx3,tx);
355             fjy3             = _mm_add_ps(fjy3,ty);
356             fjz3             = _mm_add_ps(fjz3,tz);
357             
358             /**************************
359              * CALCULATE INTERACTIONS *
360              **************************/
361
362             /* COULOMB ELECTROSTATICS */
363             velec            = _mm_mul_ps(qq21,rinv21);
364             felec            = _mm_mul_ps(velec,rinvsq21);
365
366             /* Update potential sum for this i atom from the interaction with this j atom. */
367             velecsum         = _mm_add_ps(velecsum,velec);
368
369             fscal            = felec;
370
371             /* Calculate temporary vectorial force */
372             tx               = _mm_mul_ps(fscal,dx21);
373             ty               = _mm_mul_ps(fscal,dy21);
374             tz               = _mm_mul_ps(fscal,dz21);
375
376             /* Update vectorial force */
377             fix2             = _mm_add_ps(fix2,tx);
378             fiy2             = _mm_add_ps(fiy2,ty);
379             fiz2             = _mm_add_ps(fiz2,tz);
380
381             fjx1             = _mm_add_ps(fjx1,tx);
382             fjy1             = _mm_add_ps(fjy1,ty);
383             fjz1             = _mm_add_ps(fjz1,tz);
384             
385             /**************************
386              * CALCULATE INTERACTIONS *
387              **************************/
388
389             /* COULOMB ELECTROSTATICS */
390             velec            = _mm_mul_ps(qq22,rinv22);
391             felec            = _mm_mul_ps(velec,rinvsq22);
392
393             /* Update potential sum for this i atom from the interaction with this j atom. */
394             velecsum         = _mm_add_ps(velecsum,velec);
395
396             fscal            = felec;
397
398             /* Calculate temporary vectorial force */
399             tx               = _mm_mul_ps(fscal,dx22);
400             ty               = _mm_mul_ps(fscal,dy22);
401             tz               = _mm_mul_ps(fscal,dz22);
402
403             /* Update vectorial force */
404             fix2             = _mm_add_ps(fix2,tx);
405             fiy2             = _mm_add_ps(fiy2,ty);
406             fiz2             = _mm_add_ps(fiz2,tz);
407
408             fjx2             = _mm_add_ps(fjx2,tx);
409             fjy2             = _mm_add_ps(fjy2,ty);
410             fjz2             = _mm_add_ps(fjz2,tz);
411             
412             /**************************
413              * CALCULATE INTERACTIONS *
414              **************************/
415
416             /* COULOMB ELECTROSTATICS */
417             velec            = _mm_mul_ps(qq23,rinv23);
418             felec            = _mm_mul_ps(velec,rinvsq23);
419
420             /* Update potential sum for this i atom from the interaction with this j atom. */
421             velecsum         = _mm_add_ps(velecsum,velec);
422
423             fscal            = felec;
424
425             /* Calculate temporary vectorial force */
426             tx               = _mm_mul_ps(fscal,dx23);
427             ty               = _mm_mul_ps(fscal,dy23);
428             tz               = _mm_mul_ps(fscal,dz23);
429
430             /* Update vectorial force */
431             fix2             = _mm_add_ps(fix2,tx);
432             fiy2             = _mm_add_ps(fiy2,ty);
433             fiz2             = _mm_add_ps(fiz2,tz);
434
435             fjx3             = _mm_add_ps(fjx3,tx);
436             fjy3             = _mm_add_ps(fjy3,ty);
437             fjz3             = _mm_add_ps(fjz3,tz);
438             
439             /**************************
440              * CALCULATE INTERACTIONS *
441              **************************/
442
443             /* COULOMB ELECTROSTATICS */
444             velec            = _mm_mul_ps(qq31,rinv31);
445             felec            = _mm_mul_ps(velec,rinvsq31);
446
447             /* Update potential sum for this i atom from the interaction with this j atom. */
448             velecsum         = _mm_add_ps(velecsum,velec);
449
450             fscal            = felec;
451
452             /* Calculate temporary vectorial force */
453             tx               = _mm_mul_ps(fscal,dx31);
454             ty               = _mm_mul_ps(fscal,dy31);
455             tz               = _mm_mul_ps(fscal,dz31);
456
457             /* Update vectorial force */
458             fix3             = _mm_add_ps(fix3,tx);
459             fiy3             = _mm_add_ps(fiy3,ty);
460             fiz3             = _mm_add_ps(fiz3,tz);
461
462             fjx1             = _mm_add_ps(fjx1,tx);
463             fjy1             = _mm_add_ps(fjy1,ty);
464             fjz1             = _mm_add_ps(fjz1,tz);
465             
466             /**************************
467              * CALCULATE INTERACTIONS *
468              **************************/
469
470             /* COULOMB ELECTROSTATICS */
471             velec            = _mm_mul_ps(qq32,rinv32);
472             felec            = _mm_mul_ps(velec,rinvsq32);
473
474             /* Update potential sum for this i atom from the interaction with this j atom. */
475             velecsum         = _mm_add_ps(velecsum,velec);
476
477             fscal            = felec;
478
479             /* Calculate temporary vectorial force */
480             tx               = _mm_mul_ps(fscal,dx32);
481             ty               = _mm_mul_ps(fscal,dy32);
482             tz               = _mm_mul_ps(fscal,dz32);
483
484             /* Update vectorial force */
485             fix3             = _mm_add_ps(fix3,tx);
486             fiy3             = _mm_add_ps(fiy3,ty);
487             fiz3             = _mm_add_ps(fiz3,tz);
488
489             fjx2             = _mm_add_ps(fjx2,tx);
490             fjy2             = _mm_add_ps(fjy2,ty);
491             fjz2             = _mm_add_ps(fjz2,tz);
492             
493             /**************************
494              * CALCULATE INTERACTIONS *
495              **************************/
496
497             /* COULOMB ELECTROSTATICS */
498             velec            = _mm_mul_ps(qq33,rinv33);
499             felec            = _mm_mul_ps(velec,rinvsq33);
500
501             /* Update potential sum for this i atom from the interaction with this j atom. */
502             velecsum         = _mm_add_ps(velecsum,velec);
503
504             fscal            = felec;
505
506             /* Calculate temporary vectorial force */
507             tx               = _mm_mul_ps(fscal,dx33);
508             ty               = _mm_mul_ps(fscal,dy33);
509             tz               = _mm_mul_ps(fscal,dz33);
510
511             /* Update vectorial force */
512             fix3             = _mm_add_ps(fix3,tx);
513             fiy3             = _mm_add_ps(fiy3,ty);
514             fiz3             = _mm_add_ps(fiz3,tz);
515
516             fjx3             = _mm_add_ps(fjx3,tx);
517             fjy3             = _mm_add_ps(fjy3,ty);
518             fjz3             = _mm_add_ps(fjz3,tz);
519             
520             fjptrA             = f+j_coord_offsetA;
521             fjptrB             = f+j_coord_offsetB;
522             fjptrC             = f+j_coord_offsetC;
523             fjptrD             = f+j_coord_offsetD;
524
525             gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA+DIM,fjptrB+DIM,fjptrC+DIM,fjptrD+DIM,
526                                                    fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
527
528             /* Inner loop uses 252 flops */
529         }
530
531         if(jidx<j_index_end)
532         {
533
534             /* Get j neighbor index, and coordinate index */
535             jnrlistA         = jjnr[jidx];
536             jnrlistB         = jjnr[jidx+1];
537             jnrlistC         = jjnr[jidx+2];
538             jnrlistD         = jjnr[jidx+3];
539             /* Sign of each element will be negative for non-real atoms.
540              * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
541              * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
542              */
543             dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
544             jnrA       = (jnrlistA>=0) ? jnrlistA : 0;
545             jnrB       = (jnrlistB>=0) ? jnrlistB : 0;
546             jnrC       = (jnrlistC>=0) ? jnrlistC : 0;
547             jnrD       = (jnrlistD>=0) ? jnrlistD : 0;
548             j_coord_offsetA  = DIM*jnrA;
549             j_coord_offsetB  = DIM*jnrB;
550             j_coord_offsetC  = DIM*jnrC;
551             j_coord_offsetD  = DIM*jnrD;
552
553             /* load j atom coordinates */
554             gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
555                                               x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
556                                               &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
557
558             /* Calculate displacement vector */
559             dx11             = _mm_sub_ps(ix1,jx1);
560             dy11             = _mm_sub_ps(iy1,jy1);
561             dz11             = _mm_sub_ps(iz1,jz1);
562             dx12             = _mm_sub_ps(ix1,jx2);
563             dy12             = _mm_sub_ps(iy1,jy2);
564             dz12             = _mm_sub_ps(iz1,jz2);
565             dx13             = _mm_sub_ps(ix1,jx3);
566             dy13             = _mm_sub_ps(iy1,jy3);
567             dz13             = _mm_sub_ps(iz1,jz3);
568             dx21             = _mm_sub_ps(ix2,jx1);
569             dy21             = _mm_sub_ps(iy2,jy1);
570             dz21             = _mm_sub_ps(iz2,jz1);
571             dx22             = _mm_sub_ps(ix2,jx2);
572             dy22             = _mm_sub_ps(iy2,jy2);
573             dz22             = _mm_sub_ps(iz2,jz2);
574             dx23             = _mm_sub_ps(ix2,jx3);
575             dy23             = _mm_sub_ps(iy2,jy3);
576             dz23             = _mm_sub_ps(iz2,jz3);
577             dx31             = _mm_sub_ps(ix3,jx1);
578             dy31             = _mm_sub_ps(iy3,jy1);
579             dz31             = _mm_sub_ps(iz3,jz1);
580             dx32             = _mm_sub_ps(ix3,jx2);
581             dy32             = _mm_sub_ps(iy3,jy2);
582             dz32             = _mm_sub_ps(iz3,jz2);
583             dx33             = _mm_sub_ps(ix3,jx3);
584             dy33             = _mm_sub_ps(iy3,jy3);
585             dz33             = _mm_sub_ps(iz3,jz3);
586
587             /* Calculate squared distance and things based on it */
588             rsq11            = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
589             rsq12            = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
590             rsq13            = gmx_mm_calc_rsq_ps(dx13,dy13,dz13);
591             rsq21            = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
592             rsq22            = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
593             rsq23            = gmx_mm_calc_rsq_ps(dx23,dy23,dz23);
594             rsq31            = gmx_mm_calc_rsq_ps(dx31,dy31,dz31);
595             rsq32            = gmx_mm_calc_rsq_ps(dx32,dy32,dz32);
596             rsq33            = gmx_mm_calc_rsq_ps(dx33,dy33,dz33);
597
598             rinv11           = sse2_invsqrt_f(rsq11);
599             rinv12           = sse2_invsqrt_f(rsq12);
600             rinv13           = sse2_invsqrt_f(rsq13);
601             rinv21           = sse2_invsqrt_f(rsq21);
602             rinv22           = sse2_invsqrt_f(rsq22);
603             rinv23           = sse2_invsqrt_f(rsq23);
604             rinv31           = sse2_invsqrt_f(rsq31);
605             rinv32           = sse2_invsqrt_f(rsq32);
606             rinv33           = sse2_invsqrt_f(rsq33);
607
608             rinvsq11         = _mm_mul_ps(rinv11,rinv11);
609             rinvsq12         = _mm_mul_ps(rinv12,rinv12);
610             rinvsq13         = _mm_mul_ps(rinv13,rinv13);
611             rinvsq21         = _mm_mul_ps(rinv21,rinv21);
612             rinvsq22         = _mm_mul_ps(rinv22,rinv22);
613             rinvsq23         = _mm_mul_ps(rinv23,rinv23);
614             rinvsq31         = _mm_mul_ps(rinv31,rinv31);
615             rinvsq32         = _mm_mul_ps(rinv32,rinv32);
616             rinvsq33         = _mm_mul_ps(rinv33,rinv33);
617
618             fjx1             = _mm_setzero_ps();
619             fjy1             = _mm_setzero_ps();
620             fjz1             = _mm_setzero_ps();
621             fjx2             = _mm_setzero_ps();
622             fjy2             = _mm_setzero_ps();
623             fjz2             = _mm_setzero_ps();
624             fjx3             = _mm_setzero_ps();
625             fjy3             = _mm_setzero_ps();
626             fjz3             = _mm_setzero_ps();
627
628             /**************************
629              * CALCULATE INTERACTIONS *
630              **************************/
631
632             /* COULOMB ELECTROSTATICS */
633             velec            = _mm_mul_ps(qq11,rinv11);
634             felec            = _mm_mul_ps(velec,rinvsq11);
635
636             /* Update potential sum for this i atom from the interaction with this j atom. */
637             velec            = _mm_andnot_ps(dummy_mask,velec);
638             velecsum         = _mm_add_ps(velecsum,velec);
639
640             fscal            = felec;
641
642             fscal            = _mm_andnot_ps(dummy_mask,fscal);
643
644             /* Calculate temporary vectorial force */
645             tx               = _mm_mul_ps(fscal,dx11);
646             ty               = _mm_mul_ps(fscal,dy11);
647             tz               = _mm_mul_ps(fscal,dz11);
648
649             /* Update vectorial force */
650             fix1             = _mm_add_ps(fix1,tx);
651             fiy1             = _mm_add_ps(fiy1,ty);
652             fiz1             = _mm_add_ps(fiz1,tz);
653
654             fjx1             = _mm_add_ps(fjx1,tx);
655             fjy1             = _mm_add_ps(fjy1,ty);
656             fjz1             = _mm_add_ps(fjz1,tz);
657             
658             /**************************
659              * CALCULATE INTERACTIONS *
660              **************************/
661
662             /* COULOMB ELECTROSTATICS */
663             velec            = _mm_mul_ps(qq12,rinv12);
664             felec            = _mm_mul_ps(velec,rinvsq12);
665
666             /* Update potential sum for this i atom from the interaction with this j atom. */
667             velec            = _mm_andnot_ps(dummy_mask,velec);
668             velecsum         = _mm_add_ps(velecsum,velec);
669
670             fscal            = felec;
671
672             fscal            = _mm_andnot_ps(dummy_mask,fscal);
673
674             /* Calculate temporary vectorial force */
675             tx               = _mm_mul_ps(fscal,dx12);
676             ty               = _mm_mul_ps(fscal,dy12);
677             tz               = _mm_mul_ps(fscal,dz12);
678
679             /* Update vectorial force */
680             fix1             = _mm_add_ps(fix1,tx);
681             fiy1             = _mm_add_ps(fiy1,ty);
682             fiz1             = _mm_add_ps(fiz1,tz);
683
684             fjx2             = _mm_add_ps(fjx2,tx);
685             fjy2             = _mm_add_ps(fjy2,ty);
686             fjz2             = _mm_add_ps(fjz2,tz);
687             
688             /**************************
689              * CALCULATE INTERACTIONS *
690              **************************/
691
692             /* COULOMB ELECTROSTATICS */
693             velec            = _mm_mul_ps(qq13,rinv13);
694             felec            = _mm_mul_ps(velec,rinvsq13);
695
696             /* Update potential sum for this i atom from the interaction with this j atom. */
697             velec            = _mm_andnot_ps(dummy_mask,velec);
698             velecsum         = _mm_add_ps(velecsum,velec);
699
700             fscal            = felec;
701
702             fscal            = _mm_andnot_ps(dummy_mask,fscal);
703
704             /* Calculate temporary vectorial force */
705             tx               = _mm_mul_ps(fscal,dx13);
706             ty               = _mm_mul_ps(fscal,dy13);
707             tz               = _mm_mul_ps(fscal,dz13);
708
709             /* Update vectorial force */
710             fix1             = _mm_add_ps(fix1,tx);
711             fiy1             = _mm_add_ps(fiy1,ty);
712             fiz1             = _mm_add_ps(fiz1,tz);
713
714             fjx3             = _mm_add_ps(fjx3,tx);
715             fjy3             = _mm_add_ps(fjy3,ty);
716             fjz3             = _mm_add_ps(fjz3,tz);
717             
718             /**************************
719              * CALCULATE INTERACTIONS *
720              **************************/
721
722             /* COULOMB ELECTROSTATICS */
723             velec            = _mm_mul_ps(qq21,rinv21);
724             felec            = _mm_mul_ps(velec,rinvsq21);
725
726             /* Update potential sum for this i atom from the interaction with this j atom. */
727             velec            = _mm_andnot_ps(dummy_mask,velec);
728             velecsum         = _mm_add_ps(velecsum,velec);
729
730             fscal            = felec;
731
732             fscal            = _mm_andnot_ps(dummy_mask,fscal);
733
734             /* Calculate temporary vectorial force */
735             tx               = _mm_mul_ps(fscal,dx21);
736             ty               = _mm_mul_ps(fscal,dy21);
737             tz               = _mm_mul_ps(fscal,dz21);
738
739             /* Update vectorial force */
740             fix2             = _mm_add_ps(fix2,tx);
741             fiy2             = _mm_add_ps(fiy2,ty);
742             fiz2             = _mm_add_ps(fiz2,tz);
743
744             fjx1             = _mm_add_ps(fjx1,tx);
745             fjy1             = _mm_add_ps(fjy1,ty);
746             fjz1             = _mm_add_ps(fjz1,tz);
747             
748             /**************************
749              * CALCULATE INTERACTIONS *
750              **************************/
751
752             /* COULOMB ELECTROSTATICS */
753             velec            = _mm_mul_ps(qq22,rinv22);
754             felec            = _mm_mul_ps(velec,rinvsq22);
755
756             /* Update potential sum for this i atom from the interaction with this j atom. */
757             velec            = _mm_andnot_ps(dummy_mask,velec);
758             velecsum         = _mm_add_ps(velecsum,velec);
759
760             fscal            = felec;
761
762             fscal            = _mm_andnot_ps(dummy_mask,fscal);
763
764             /* Calculate temporary vectorial force */
765             tx               = _mm_mul_ps(fscal,dx22);
766             ty               = _mm_mul_ps(fscal,dy22);
767             tz               = _mm_mul_ps(fscal,dz22);
768
769             /* Update vectorial force */
770             fix2             = _mm_add_ps(fix2,tx);
771             fiy2             = _mm_add_ps(fiy2,ty);
772             fiz2             = _mm_add_ps(fiz2,tz);
773
774             fjx2             = _mm_add_ps(fjx2,tx);
775             fjy2             = _mm_add_ps(fjy2,ty);
776             fjz2             = _mm_add_ps(fjz2,tz);
777             
778             /**************************
779              * CALCULATE INTERACTIONS *
780              **************************/
781
782             /* COULOMB ELECTROSTATICS */
783             velec            = _mm_mul_ps(qq23,rinv23);
784             felec            = _mm_mul_ps(velec,rinvsq23);
785
786             /* Update potential sum for this i atom from the interaction with this j atom. */
787             velec            = _mm_andnot_ps(dummy_mask,velec);
788             velecsum         = _mm_add_ps(velecsum,velec);
789
790             fscal            = felec;
791
792             fscal            = _mm_andnot_ps(dummy_mask,fscal);
793
794             /* Calculate temporary vectorial force */
795             tx               = _mm_mul_ps(fscal,dx23);
796             ty               = _mm_mul_ps(fscal,dy23);
797             tz               = _mm_mul_ps(fscal,dz23);
798
799             /* Update vectorial force */
800             fix2             = _mm_add_ps(fix2,tx);
801             fiy2             = _mm_add_ps(fiy2,ty);
802             fiz2             = _mm_add_ps(fiz2,tz);
803
804             fjx3             = _mm_add_ps(fjx3,tx);
805             fjy3             = _mm_add_ps(fjy3,ty);
806             fjz3             = _mm_add_ps(fjz3,tz);
807             
808             /**************************
809              * CALCULATE INTERACTIONS *
810              **************************/
811
812             /* COULOMB ELECTROSTATICS */
813             velec            = _mm_mul_ps(qq31,rinv31);
814             felec            = _mm_mul_ps(velec,rinvsq31);
815
816             /* Update potential sum for this i atom from the interaction with this j atom. */
817             velec            = _mm_andnot_ps(dummy_mask,velec);
818             velecsum         = _mm_add_ps(velecsum,velec);
819
820             fscal            = felec;
821
822             fscal            = _mm_andnot_ps(dummy_mask,fscal);
823
824             /* Calculate temporary vectorial force */
825             tx               = _mm_mul_ps(fscal,dx31);
826             ty               = _mm_mul_ps(fscal,dy31);
827             tz               = _mm_mul_ps(fscal,dz31);
828
829             /* Update vectorial force */
830             fix3             = _mm_add_ps(fix3,tx);
831             fiy3             = _mm_add_ps(fiy3,ty);
832             fiz3             = _mm_add_ps(fiz3,tz);
833
834             fjx1             = _mm_add_ps(fjx1,tx);
835             fjy1             = _mm_add_ps(fjy1,ty);
836             fjz1             = _mm_add_ps(fjz1,tz);
837             
838             /**************************
839              * CALCULATE INTERACTIONS *
840              **************************/
841
842             /* COULOMB ELECTROSTATICS */
843             velec            = _mm_mul_ps(qq32,rinv32);
844             felec            = _mm_mul_ps(velec,rinvsq32);
845
846             /* Update potential sum for this i atom from the interaction with this j atom. */
847             velec            = _mm_andnot_ps(dummy_mask,velec);
848             velecsum         = _mm_add_ps(velecsum,velec);
849
850             fscal            = felec;
851
852             fscal            = _mm_andnot_ps(dummy_mask,fscal);
853
854             /* Calculate temporary vectorial force */
855             tx               = _mm_mul_ps(fscal,dx32);
856             ty               = _mm_mul_ps(fscal,dy32);
857             tz               = _mm_mul_ps(fscal,dz32);
858
859             /* Update vectorial force */
860             fix3             = _mm_add_ps(fix3,tx);
861             fiy3             = _mm_add_ps(fiy3,ty);
862             fiz3             = _mm_add_ps(fiz3,tz);
863
864             fjx2             = _mm_add_ps(fjx2,tx);
865             fjy2             = _mm_add_ps(fjy2,ty);
866             fjz2             = _mm_add_ps(fjz2,tz);
867             
868             /**************************
869              * CALCULATE INTERACTIONS *
870              **************************/
871
872             /* COULOMB ELECTROSTATICS */
873             velec            = _mm_mul_ps(qq33,rinv33);
874             felec            = _mm_mul_ps(velec,rinvsq33);
875
876             /* Update potential sum for this i atom from the interaction with this j atom. */
877             velec            = _mm_andnot_ps(dummy_mask,velec);
878             velecsum         = _mm_add_ps(velecsum,velec);
879
880             fscal            = felec;
881
882             fscal            = _mm_andnot_ps(dummy_mask,fscal);
883
884             /* Calculate temporary vectorial force */
885             tx               = _mm_mul_ps(fscal,dx33);
886             ty               = _mm_mul_ps(fscal,dy33);
887             tz               = _mm_mul_ps(fscal,dz33);
888
889             /* Update vectorial force */
890             fix3             = _mm_add_ps(fix3,tx);
891             fiy3             = _mm_add_ps(fiy3,ty);
892             fiz3             = _mm_add_ps(fiz3,tz);
893
894             fjx3             = _mm_add_ps(fjx3,tx);
895             fjy3             = _mm_add_ps(fjy3,ty);
896             fjz3             = _mm_add_ps(fjz3,tz);
897             
898             fjptrA             = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
899             fjptrB             = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
900             fjptrC             = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
901             fjptrD             = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
902
903             gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA+DIM,fjptrB+DIM,fjptrC+DIM,fjptrD+DIM,
904                                                    fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
905
906             /* Inner loop uses 252 flops */
907         }
908
909         /* End of innermost loop */
910
911         gmx_mm_update_iforce_3atom_swizzle_ps(fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
912                                               f+i_coord_offset+DIM,fshift+i_shift_offset);
913
914         ggid                        = gid[iidx];
915         /* Update potential energies */
916         gmx_mm_update_1pot_ps(velecsum,kernel_data->energygrp_elec+ggid);
917
918         /* Increment number of inner iterations */
919         inneriter                  += j_index_end - j_index_start;
920
921         /* Outer loop uses 19 flops */
922     }
923
924     /* Increment number of outer iterations */
925     outeriter        += nri;
926
927     /* Update outer/inner flops */
928
929     inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W4W4_VF,outeriter*19 + inneriter*252);
930 }
931 /*
932  * Gromacs nonbonded kernel:   nb_kernel_ElecCoul_VdwNone_GeomW4W4_F_sse2_single
933  * Electrostatics interaction: Coulomb
934  * VdW interaction:            None
935  * Geometry:                   Water4-Water4
936  * Calculate force/pot:        Force
937  */
938 void
939 nb_kernel_ElecCoul_VdwNone_GeomW4W4_F_sse2_single
940                     (t_nblist                    * gmx_restrict       nlist,
941                      rvec                        * gmx_restrict          xx,
942                      rvec                        * gmx_restrict          ff,
943                      struct t_forcerec           * gmx_restrict          fr,
944                      t_mdatoms                   * gmx_restrict     mdatoms,
945                      nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
946                      t_nrnb                      * gmx_restrict        nrnb)
947 {
948     /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or 
949      * just 0 for non-waters.
950      * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
951      * jnr indices corresponding to data put in the four positions in the SIMD register.
952      */
953     int              i_shift_offset,i_coord_offset,outeriter,inneriter;
954     int              j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
955     int              jnrA,jnrB,jnrC,jnrD;
956     int              jnrlistA,jnrlistB,jnrlistC,jnrlistD;
957     int              j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
958     int              *iinr,*jindex,*jjnr,*shiftidx,*gid;
959     real             rcutoff_scalar;
960     real             *shiftvec,*fshift,*x,*f;
961     real             *fjptrA,*fjptrB,*fjptrC,*fjptrD;
962     real             scratch[4*DIM];
963     __m128           tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
964     int              vdwioffset1;
965     __m128           ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
966     int              vdwioffset2;
967     __m128           ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
968     int              vdwioffset3;
969     __m128           ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
970     int              vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
971     __m128           jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
972     int              vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
973     __m128           jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
974     int              vdwjidx3A,vdwjidx3B,vdwjidx3C,vdwjidx3D;
975     __m128           jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
976     __m128           dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
977     __m128           dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
978     __m128           dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
979     __m128           dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
980     __m128           dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
981     __m128           dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
982     __m128           dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
983     __m128           dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
984     __m128           dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
985     __m128           velec,felec,velecsum,facel,crf,krf,krf2;
986     real             *charge;
987     __m128           dummy_mask,cutoff_mask;
988     __m128           signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
989     __m128           one     = _mm_set1_ps(1.0);
990     __m128           two     = _mm_set1_ps(2.0);
991     x                = xx[0];
992     f                = ff[0];
993
994     nri              = nlist->nri;
995     iinr             = nlist->iinr;
996     jindex           = nlist->jindex;
997     jjnr             = nlist->jjnr;
998     shiftidx         = nlist->shift;
999     gid              = nlist->gid;
1000     shiftvec         = fr->shift_vec[0];
1001     fshift           = fr->fshift[0];
1002     facel            = _mm_set1_ps(fr->ic->epsfac);
1003     charge           = mdatoms->chargeA;
1004
1005     /* Setup water-specific parameters */
1006     inr              = nlist->iinr[0];
1007     iq1              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
1008     iq2              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
1009     iq3              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+3]));
1010
1011     jq1              = _mm_set1_ps(charge[inr+1]);
1012     jq2              = _mm_set1_ps(charge[inr+2]);
1013     jq3              = _mm_set1_ps(charge[inr+3]);
1014     qq11             = _mm_mul_ps(iq1,jq1);
1015     qq12             = _mm_mul_ps(iq1,jq2);
1016     qq13             = _mm_mul_ps(iq1,jq3);
1017     qq21             = _mm_mul_ps(iq2,jq1);
1018     qq22             = _mm_mul_ps(iq2,jq2);
1019     qq23             = _mm_mul_ps(iq2,jq3);
1020     qq31             = _mm_mul_ps(iq3,jq1);
1021     qq32             = _mm_mul_ps(iq3,jq2);
1022     qq33             = _mm_mul_ps(iq3,jq3);
1023
1024     /* Avoid stupid compiler warnings */
1025     jnrA = jnrB = jnrC = jnrD = 0;
1026     j_coord_offsetA = 0;
1027     j_coord_offsetB = 0;
1028     j_coord_offsetC = 0;
1029     j_coord_offsetD = 0;
1030
1031     outeriter        = 0;
1032     inneriter        = 0;
1033
1034     for(iidx=0;iidx<4*DIM;iidx++)
1035     {
1036         scratch[iidx] = 0.0;
1037     }  
1038
1039     /* Start outer loop over neighborlists */
1040     for(iidx=0; iidx<nri; iidx++)
1041     {
1042         /* Load shift vector for this list */
1043         i_shift_offset   = DIM*shiftidx[iidx];
1044
1045         /* Load limits for loop over neighbors */
1046         j_index_start    = jindex[iidx];
1047         j_index_end      = jindex[iidx+1];
1048
1049         /* Get outer coordinate index */
1050         inr              = iinr[iidx];
1051         i_coord_offset   = DIM*inr;
1052
1053         /* Load i particle coords and add shift vector */
1054         gmx_mm_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset+DIM,
1055                                                  &ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
1056         
1057         fix1             = _mm_setzero_ps();
1058         fiy1             = _mm_setzero_ps();
1059         fiz1             = _mm_setzero_ps();
1060         fix2             = _mm_setzero_ps();
1061         fiy2             = _mm_setzero_ps();
1062         fiz2             = _mm_setzero_ps();
1063         fix3             = _mm_setzero_ps();
1064         fiy3             = _mm_setzero_ps();
1065         fiz3             = _mm_setzero_ps();
1066
1067         /* Start inner kernel loop */
1068         for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
1069         {
1070
1071             /* Get j neighbor index, and coordinate index */
1072             jnrA             = jjnr[jidx];
1073             jnrB             = jjnr[jidx+1];
1074             jnrC             = jjnr[jidx+2];
1075             jnrD             = jjnr[jidx+3];
1076             j_coord_offsetA  = DIM*jnrA;
1077             j_coord_offsetB  = DIM*jnrB;
1078             j_coord_offsetC  = DIM*jnrC;
1079             j_coord_offsetD  = DIM*jnrD;
1080
1081             /* load j atom coordinates */
1082             gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
1083                                               x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
1084                                               &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
1085
1086             /* Calculate displacement vector */
1087             dx11             = _mm_sub_ps(ix1,jx1);
1088             dy11             = _mm_sub_ps(iy1,jy1);
1089             dz11             = _mm_sub_ps(iz1,jz1);
1090             dx12             = _mm_sub_ps(ix1,jx2);
1091             dy12             = _mm_sub_ps(iy1,jy2);
1092             dz12             = _mm_sub_ps(iz1,jz2);
1093             dx13             = _mm_sub_ps(ix1,jx3);
1094             dy13             = _mm_sub_ps(iy1,jy3);
1095             dz13             = _mm_sub_ps(iz1,jz3);
1096             dx21             = _mm_sub_ps(ix2,jx1);
1097             dy21             = _mm_sub_ps(iy2,jy1);
1098             dz21             = _mm_sub_ps(iz2,jz1);
1099             dx22             = _mm_sub_ps(ix2,jx2);
1100             dy22             = _mm_sub_ps(iy2,jy2);
1101             dz22             = _mm_sub_ps(iz2,jz2);
1102             dx23             = _mm_sub_ps(ix2,jx3);
1103             dy23             = _mm_sub_ps(iy2,jy3);
1104             dz23             = _mm_sub_ps(iz2,jz3);
1105             dx31             = _mm_sub_ps(ix3,jx1);
1106             dy31             = _mm_sub_ps(iy3,jy1);
1107             dz31             = _mm_sub_ps(iz3,jz1);
1108             dx32             = _mm_sub_ps(ix3,jx2);
1109             dy32             = _mm_sub_ps(iy3,jy2);
1110             dz32             = _mm_sub_ps(iz3,jz2);
1111             dx33             = _mm_sub_ps(ix3,jx3);
1112             dy33             = _mm_sub_ps(iy3,jy3);
1113             dz33             = _mm_sub_ps(iz3,jz3);
1114
1115             /* Calculate squared distance and things based on it */
1116             rsq11            = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1117             rsq12            = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1118             rsq13            = gmx_mm_calc_rsq_ps(dx13,dy13,dz13);
1119             rsq21            = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1120             rsq22            = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1121             rsq23            = gmx_mm_calc_rsq_ps(dx23,dy23,dz23);
1122             rsq31            = gmx_mm_calc_rsq_ps(dx31,dy31,dz31);
1123             rsq32            = gmx_mm_calc_rsq_ps(dx32,dy32,dz32);
1124             rsq33            = gmx_mm_calc_rsq_ps(dx33,dy33,dz33);
1125
1126             rinv11           = sse2_invsqrt_f(rsq11);
1127             rinv12           = sse2_invsqrt_f(rsq12);
1128             rinv13           = sse2_invsqrt_f(rsq13);
1129             rinv21           = sse2_invsqrt_f(rsq21);
1130             rinv22           = sse2_invsqrt_f(rsq22);
1131             rinv23           = sse2_invsqrt_f(rsq23);
1132             rinv31           = sse2_invsqrt_f(rsq31);
1133             rinv32           = sse2_invsqrt_f(rsq32);
1134             rinv33           = sse2_invsqrt_f(rsq33);
1135
1136             rinvsq11         = _mm_mul_ps(rinv11,rinv11);
1137             rinvsq12         = _mm_mul_ps(rinv12,rinv12);
1138             rinvsq13         = _mm_mul_ps(rinv13,rinv13);
1139             rinvsq21         = _mm_mul_ps(rinv21,rinv21);
1140             rinvsq22         = _mm_mul_ps(rinv22,rinv22);
1141             rinvsq23         = _mm_mul_ps(rinv23,rinv23);
1142             rinvsq31         = _mm_mul_ps(rinv31,rinv31);
1143             rinvsq32         = _mm_mul_ps(rinv32,rinv32);
1144             rinvsq33         = _mm_mul_ps(rinv33,rinv33);
1145
1146             fjx1             = _mm_setzero_ps();
1147             fjy1             = _mm_setzero_ps();
1148             fjz1             = _mm_setzero_ps();
1149             fjx2             = _mm_setzero_ps();
1150             fjy2             = _mm_setzero_ps();
1151             fjz2             = _mm_setzero_ps();
1152             fjx3             = _mm_setzero_ps();
1153             fjy3             = _mm_setzero_ps();
1154             fjz3             = _mm_setzero_ps();
1155
1156             /**************************
1157              * CALCULATE INTERACTIONS *
1158              **************************/
1159
1160             /* COULOMB ELECTROSTATICS */
1161             velec            = _mm_mul_ps(qq11,rinv11);
1162             felec            = _mm_mul_ps(velec,rinvsq11);
1163
1164             fscal            = felec;
1165
1166             /* Calculate temporary vectorial force */
1167             tx               = _mm_mul_ps(fscal,dx11);
1168             ty               = _mm_mul_ps(fscal,dy11);
1169             tz               = _mm_mul_ps(fscal,dz11);
1170
1171             /* Update vectorial force */
1172             fix1             = _mm_add_ps(fix1,tx);
1173             fiy1             = _mm_add_ps(fiy1,ty);
1174             fiz1             = _mm_add_ps(fiz1,tz);
1175
1176             fjx1             = _mm_add_ps(fjx1,tx);
1177             fjy1             = _mm_add_ps(fjy1,ty);
1178             fjz1             = _mm_add_ps(fjz1,tz);
1179             
1180             /**************************
1181              * CALCULATE INTERACTIONS *
1182              **************************/
1183
1184             /* COULOMB ELECTROSTATICS */
1185             velec            = _mm_mul_ps(qq12,rinv12);
1186             felec            = _mm_mul_ps(velec,rinvsq12);
1187
1188             fscal            = felec;
1189
1190             /* Calculate temporary vectorial force */
1191             tx               = _mm_mul_ps(fscal,dx12);
1192             ty               = _mm_mul_ps(fscal,dy12);
1193             tz               = _mm_mul_ps(fscal,dz12);
1194
1195             /* Update vectorial force */
1196             fix1             = _mm_add_ps(fix1,tx);
1197             fiy1             = _mm_add_ps(fiy1,ty);
1198             fiz1             = _mm_add_ps(fiz1,tz);
1199
1200             fjx2             = _mm_add_ps(fjx2,tx);
1201             fjy2             = _mm_add_ps(fjy2,ty);
1202             fjz2             = _mm_add_ps(fjz2,tz);
1203             
1204             /**************************
1205              * CALCULATE INTERACTIONS *
1206              **************************/
1207
1208             /* COULOMB ELECTROSTATICS */
1209             velec            = _mm_mul_ps(qq13,rinv13);
1210             felec            = _mm_mul_ps(velec,rinvsq13);
1211
1212             fscal            = felec;
1213
1214             /* Calculate temporary vectorial force */
1215             tx               = _mm_mul_ps(fscal,dx13);
1216             ty               = _mm_mul_ps(fscal,dy13);
1217             tz               = _mm_mul_ps(fscal,dz13);
1218
1219             /* Update vectorial force */
1220             fix1             = _mm_add_ps(fix1,tx);
1221             fiy1             = _mm_add_ps(fiy1,ty);
1222             fiz1             = _mm_add_ps(fiz1,tz);
1223
1224             fjx3             = _mm_add_ps(fjx3,tx);
1225             fjy3             = _mm_add_ps(fjy3,ty);
1226             fjz3             = _mm_add_ps(fjz3,tz);
1227             
1228             /**************************
1229              * CALCULATE INTERACTIONS *
1230              **************************/
1231
1232             /* COULOMB ELECTROSTATICS */
1233             velec            = _mm_mul_ps(qq21,rinv21);
1234             felec            = _mm_mul_ps(velec,rinvsq21);
1235
1236             fscal            = felec;
1237
1238             /* Calculate temporary vectorial force */
1239             tx               = _mm_mul_ps(fscal,dx21);
1240             ty               = _mm_mul_ps(fscal,dy21);
1241             tz               = _mm_mul_ps(fscal,dz21);
1242
1243             /* Update vectorial force */
1244             fix2             = _mm_add_ps(fix2,tx);
1245             fiy2             = _mm_add_ps(fiy2,ty);
1246             fiz2             = _mm_add_ps(fiz2,tz);
1247
1248             fjx1             = _mm_add_ps(fjx1,tx);
1249             fjy1             = _mm_add_ps(fjy1,ty);
1250             fjz1             = _mm_add_ps(fjz1,tz);
1251             
1252             /**************************
1253              * CALCULATE INTERACTIONS *
1254              **************************/
1255
1256             /* COULOMB ELECTROSTATICS */
1257             velec            = _mm_mul_ps(qq22,rinv22);
1258             felec            = _mm_mul_ps(velec,rinvsq22);
1259
1260             fscal            = felec;
1261
1262             /* Calculate temporary vectorial force */
1263             tx               = _mm_mul_ps(fscal,dx22);
1264             ty               = _mm_mul_ps(fscal,dy22);
1265             tz               = _mm_mul_ps(fscal,dz22);
1266
1267             /* Update vectorial force */
1268             fix2             = _mm_add_ps(fix2,tx);
1269             fiy2             = _mm_add_ps(fiy2,ty);
1270             fiz2             = _mm_add_ps(fiz2,tz);
1271
1272             fjx2             = _mm_add_ps(fjx2,tx);
1273             fjy2             = _mm_add_ps(fjy2,ty);
1274             fjz2             = _mm_add_ps(fjz2,tz);
1275             
1276             /**************************
1277              * CALCULATE INTERACTIONS *
1278              **************************/
1279
1280             /* COULOMB ELECTROSTATICS */
1281             velec            = _mm_mul_ps(qq23,rinv23);
1282             felec            = _mm_mul_ps(velec,rinvsq23);
1283
1284             fscal            = felec;
1285
1286             /* Calculate temporary vectorial force */
1287             tx               = _mm_mul_ps(fscal,dx23);
1288             ty               = _mm_mul_ps(fscal,dy23);
1289             tz               = _mm_mul_ps(fscal,dz23);
1290
1291             /* Update vectorial force */
1292             fix2             = _mm_add_ps(fix2,tx);
1293             fiy2             = _mm_add_ps(fiy2,ty);
1294             fiz2             = _mm_add_ps(fiz2,tz);
1295
1296             fjx3             = _mm_add_ps(fjx3,tx);
1297             fjy3             = _mm_add_ps(fjy3,ty);
1298             fjz3             = _mm_add_ps(fjz3,tz);
1299             
1300             /**************************
1301              * CALCULATE INTERACTIONS *
1302              **************************/
1303
1304             /* COULOMB ELECTROSTATICS */
1305             velec            = _mm_mul_ps(qq31,rinv31);
1306             felec            = _mm_mul_ps(velec,rinvsq31);
1307
1308             fscal            = felec;
1309
1310             /* Calculate temporary vectorial force */
1311             tx               = _mm_mul_ps(fscal,dx31);
1312             ty               = _mm_mul_ps(fscal,dy31);
1313             tz               = _mm_mul_ps(fscal,dz31);
1314
1315             /* Update vectorial force */
1316             fix3             = _mm_add_ps(fix3,tx);
1317             fiy3             = _mm_add_ps(fiy3,ty);
1318             fiz3             = _mm_add_ps(fiz3,tz);
1319
1320             fjx1             = _mm_add_ps(fjx1,tx);
1321             fjy1             = _mm_add_ps(fjy1,ty);
1322             fjz1             = _mm_add_ps(fjz1,tz);
1323             
1324             /**************************
1325              * CALCULATE INTERACTIONS *
1326              **************************/
1327
1328             /* COULOMB ELECTROSTATICS */
1329             velec            = _mm_mul_ps(qq32,rinv32);
1330             felec            = _mm_mul_ps(velec,rinvsq32);
1331
1332             fscal            = felec;
1333
1334             /* Calculate temporary vectorial force */
1335             tx               = _mm_mul_ps(fscal,dx32);
1336             ty               = _mm_mul_ps(fscal,dy32);
1337             tz               = _mm_mul_ps(fscal,dz32);
1338
1339             /* Update vectorial force */
1340             fix3             = _mm_add_ps(fix3,tx);
1341             fiy3             = _mm_add_ps(fiy3,ty);
1342             fiz3             = _mm_add_ps(fiz3,tz);
1343
1344             fjx2             = _mm_add_ps(fjx2,tx);
1345             fjy2             = _mm_add_ps(fjy2,ty);
1346             fjz2             = _mm_add_ps(fjz2,tz);
1347             
1348             /**************************
1349              * CALCULATE INTERACTIONS *
1350              **************************/
1351
1352             /* COULOMB ELECTROSTATICS */
1353             velec            = _mm_mul_ps(qq33,rinv33);
1354             felec            = _mm_mul_ps(velec,rinvsq33);
1355
1356             fscal            = felec;
1357
1358             /* Calculate temporary vectorial force */
1359             tx               = _mm_mul_ps(fscal,dx33);
1360             ty               = _mm_mul_ps(fscal,dy33);
1361             tz               = _mm_mul_ps(fscal,dz33);
1362
1363             /* Update vectorial force */
1364             fix3             = _mm_add_ps(fix3,tx);
1365             fiy3             = _mm_add_ps(fiy3,ty);
1366             fiz3             = _mm_add_ps(fiz3,tz);
1367
1368             fjx3             = _mm_add_ps(fjx3,tx);
1369             fjy3             = _mm_add_ps(fjy3,ty);
1370             fjz3             = _mm_add_ps(fjz3,tz);
1371             
1372             fjptrA             = f+j_coord_offsetA;
1373             fjptrB             = f+j_coord_offsetB;
1374             fjptrC             = f+j_coord_offsetC;
1375             fjptrD             = f+j_coord_offsetD;
1376
1377             gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA+DIM,fjptrB+DIM,fjptrC+DIM,fjptrD+DIM,
1378                                                    fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
1379
1380             /* Inner loop uses 243 flops */
1381         }
1382
1383         if(jidx<j_index_end)
1384         {
1385
1386             /* Get j neighbor index, and coordinate index */
1387             jnrlistA         = jjnr[jidx];
1388             jnrlistB         = jjnr[jidx+1];
1389             jnrlistC         = jjnr[jidx+2];
1390             jnrlistD         = jjnr[jidx+3];
1391             /* Sign of each element will be negative for non-real atoms.
1392              * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
1393              * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
1394              */
1395             dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
1396             jnrA       = (jnrlistA>=0) ? jnrlistA : 0;
1397             jnrB       = (jnrlistB>=0) ? jnrlistB : 0;
1398             jnrC       = (jnrlistC>=0) ? jnrlistC : 0;
1399             jnrD       = (jnrlistD>=0) ? jnrlistD : 0;
1400             j_coord_offsetA  = DIM*jnrA;
1401             j_coord_offsetB  = DIM*jnrB;
1402             j_coord_offsetC  = DIM*jnrC;
1403             j_coord_offsetD  = DIM*jnrD;
1404
1405             /* load j atom coordinates */
1406             gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
1407                                               x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
1408                                               &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
1409
1410             /* Calculate displacement vector */
1411             dx11             = _mm_sub_ps(ix1,jx1);
1412             dy11             = _mm_sub_ps(iy1,jy1);
1413             dz11             = _mm_sub_ps(iz1,jz1);
1414             dx12             = _mm_sub_ps(ix1,jx2);
1415             dy12             = _mm_sub_ps(iy1,jy2);
1416             dz12             = _mm_sub_ps(iz1,jz2);
1417             dx13             = _mm_sub_ps(ix1,jx3);
1418             dy13             = _mm_sub_ps(iy1,jy3);
1419             dz13             = _mm_sub_ps(iz1,jz3);
1420             dx21             = _mm_sub_ps(ix2,jx1);
1421             dy21             = _mm_sub_ps(iy2,jy1);
1422             dz21             = _mm_sub_ps(iz2,jz1);
1423             dx22             = _mm_sub_ps(ix2,jx2);
1424             dy22             = _mm_sub_ps(iy2,jy2);
1425             dz22             = _mm_sub_ps(iz2,jz2);
1426             dx23             = _mm_sub_ps(ix2,jx3);
1427             dy23             = _mm_sub_ps(iy2,jy3);
1428             dz23             = _mm_sub_ps(iz2,jz3);
1429             dx31             = _mm_sub_ps(ix3,jx1);
1430             dy31             = _mm_sub_ps(iy3,jy1);
1431             dz31             = _mm_sub_ps(iz3,jz1);
1432             dx32             = _mm_sub_ps(ix3,jx2);
1433             dy32             = _mm_sub_ps(iy3,jy2);
1434             dz32             = _mm_sub_ps(iz3,jz2);
1435             dx33             = _mm_sub_ps(ix3,jx3);
1436             dy33             = _mm_sub_ps(iy3,jy3);
1437             dz33             = _mm_sub_ps(iz3,jz3);
1438
1439             /* Calculate squared distance and things based on it */
1440             rsq11            = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1441             rsq12            = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1442             rsq13            = gmx_mm_calc_rsq_ps(dx13,dy13,dz13);
1443             rsq21            = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1444             rsq22            = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1445             rsq23            = gmx_mm_calc_rsq_ps(dx23,dy23,dz23);
1446             rsq31            = gmx_mm_calc_rsq_ps(dx31,dy31,dz31);
1447             rsq32            = gmx_mm_calc_rsq_ps(dx32,dy32,dz32);
1448             rsq33            = gmx_mm_calc_rsq_ps(dx33,dy33,dz33);
1449
1450             rinv11           = sse2_invsqrt_f(rsq11);
1451             rinv12           = sse2_invsqrt_f(rsq12);
1452             rinv13           = sse2_invsqrt_f(rsq13);
1453             rinv21           = sse2_invsqrt_f(rsq21);
1454             rinv22           = sse2_invsqrt_f(rsq22);
1455             rinv23           = sse2_invsqrt_f(rsq23);
1456             rinv31           = sse2_invsqrt_f(rsq31);
1457             rinv32           = sse2_invsqrt_f(rsq32);
1458             rinv33           = sse2_invsqrt_f(rsq33);
1459
1460             rinvsq11         = _mm_mul_ps(rinv11,rinv11);
1461             rinvsq12         = _mm_mul_ps(rinv12,rinv12);
1462             rinvsq13         = _mm_mul_ps(rinv13,rinv13);
1463             rinvsq21         = _mm_mul_ps(rinv21,rinv21);
1464             rinvsq22         = _mm_mul_ps(rinv22,rinv22);
1465             rinvsq23         = _mm_mul_ps(rinv23,rinv23);
1466             rinvsq31         = _mm_mul_ps(rinv31,rinv31);
1467             rinvsq32         = _mm_mul_ps(rinv32,rinv32);
1468             rinvsq33         = _mm_mul_ps(rinv33,rinv33);
1469
1470             fjx1             = _mm_setzero_ps();
1471             fjy1             = _mm_setzero_ps();
1472             fjz1             = _mm_setzero_ps();
1473             fjx2             = _mm_setzero_ps();
1474             fjy2             = _mm_setzero_ps();
1475             fjz2             = _mm_setzero_ps();
1476             fjx3             = _mm_setzero_ps();
1477             fjy3             = _mm_setzero_ps();
1478             fjz3             = _mm_setzero_ps();
1479
1480             /**************************
1481              * CALCULATE INTERACTIONS *
1482              **************************/
1483
1484             /* COULOMB ELECTROSTATICS */
1485             velec            = _mm_mul_ps(qq11,rinv11);
1486             felec            = _mm_mul_ps(velec,rinvsq11);
1487
1488             fscal            = felec;
1489
1490             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1491
1492             /* Calculate temporary vectorial force */
1493             tx               = _mm_mul_ps(fscal,dx11);
1494             ty               = _mm_mul_ps(fscal,dy11);
1495             tz               = _mm_mul_ps(fscal,dz11);
1496
1497             /* Update vectorial force */
1498             fix1             = _mm_add_ps(fix1,tx);
1499             fiy1             = _mm_add_ps(fiy1,ty);
1500             fiz1             = _mm_add_ps(fiz1,tz);
1501
1502             fjx1             = _mm_add_ps(fjx1,tx);
1503             fjy1             = _mm_add_ps(fjy1,ty);
1504             fjz1             = _mm_add_ps(fjz1,tz);
1505             
1506             /**************************
1507              * CALCULATE INTERACTIONS *
1508              **************************/
1509
1510             /* COULOMB ELECTROSTATICS */
1511             velec            = _mm_mul_ps(qq12,rinv12);
1512             felec            = _mm_mul_ps(velec,rinvsq12);
1513
1514             fscal            = felec;
1515
1516             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1517
1518             /* Calculate temporary vectorial force */
1519             tx               = _mm_mul_ps(fscal,dx12);
1520             ty               = _mm_mul_ps(fscal,dy12);
1521             tz               = _mm_mul_ps(fscal,dz12);
1522
1523             /* Update vectorial force */
1524             fix1             = _mm_add_ps(fix1,tx);
1525             fiy1             = _mm_add_ps(fiy1,ty);
1526             fiz1             = _mm_add_ps(fiz1,tz);
1527
1528             fjx2             = _mm_add_ps(fjx2,tx);
1529             fjy2             = _mm_add_ps(fjy2,ty);
1530             fjz2             = _mm_add_ps(fjz2,tz);
1531             
1532             /**************************
1533              * CALCULATE INTERACTIONS *
1534              **************************/
1535
1536             /* COULOMB ELECTROSTATICS */
1537             velec            = _mm_mul_ps(qq13,rinv13);
1538             felec            = _mm_mul_ps(velec,rinvsq13);
1539
1540             fscal            = felec;
1541
1542             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1543
1544             /* Calculate temporary vectorial force */
1545             tx               = _mm_mul_ps(fscal,dx13);
1546             ty               = _mm_mul_ps(fscal,dy13);
1547             tz               = _mm_mul_ps(fscal,dz13);
1548
1549             /* Update vectorial force */
1550             fix1             = _mm_add_ps(fix1,tx);
1551             fiy1             = _mm_add_ps(fiy1,ty);
1552             fiz1             = _mm_add_ps(fiz1,tz);
1553
1554             fjx3             = _mm_add_ps(fjx3,tx);
1555             fjy3             = _mm_add_ps(fjy3,ty);
1556             fjz3             = _mm_add_ps(fjz3,tz);
1557             
1558             /**************************
1559              * CALCULATE INTERACTIONS *
1560              **************************/
1561
1562             /* COULOMB ELECTROSTATICS */
1563             velec            = _mm_mul_ps(qq21,rinv21);
1564             felec            = _mm_mul_ps(velec,rinvsq21);
1565
1566             fscal            = felec;
1567
1568             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1569
1570             /* Calculate temporary vectorial force */
1571             tx               = _mm_mul_ps(fscal,dx21);
1572             ty               = _mm_mul_ps(fscal,dy21);
1573             tz               = _mm_mul_ps(fscal,dz21);
1574
1575             /* Update vectorial force */
1576             fix2             = _mm_add_ps(fix2,tx);
1577             fiy2             = _mm_add_ps(fiy2,ty);
1578             fiz2             = _mm_add_ps(fiz2,tz);
1579
1580             fjx1             = _mm_add_ps(fjx1,tx);
1581             fjy1             = _mm_add_ps(fjy1,ty);
1582             fjz1             = _mm_add_ps(fjz1,tz);
1583             
1584             /**************************
1585              * CALCULATE INTERACTIONS *
1586              **************************/
1587
1588             /* COULOMB ELECTROSTATICS */
1589             velec            = _mm_mul_ps(qq22,rinv22);
1590             felec            = _mm_mul_ps(velec,rinvsq22);
1591
1592             fscal            = felec;
1593
1594             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1595
1596             /* Calculate temporary vectorial force */
1597             tx               = _mm_mul_ps(fscal,dx22);
1598             ty               = _mm_mul_ps(fscal,dy22);
1599             tz               = _mm_mul_ps(fscal,dz22);
1600
1601             /* Update vectorial force */
1602             fix2             = _mm_add_ps(fix2,tx);
1603             fiy2             = _mm_add_ps(fiy2,ty);
1604             fiz2             = _mm_add_ps(fiz2,tz);
1605
1606             fjx2             = _mm_add_ps(fjx2,tx);
1607             fjy2             = _mm_add_ps(fjy2,ty);
1608             fjz2             = _mm_add_ps(fjz2,tz);
1609             
1610             /**************************
1611              * CALCULATE INTERACTIONS *
1612              **************************/
1613
1614             /* COULOMB ELECTROSTATICS */
1615             velec            = _mm_mul_ps(qq23,rinv23);
1616             felec            = _mm_mul_ps(velec,rinvsq23);
1617
1618             fscal            = felec;
1619
1620             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1621
1622             /* Calculate temporary vectorial force */
1623             tx               = _mm_mul_ps(fscal,dx23);
1624             ty               = _mm_mul_ps(fscal,dy23);
1625             tz               = _mm_mul_ps(fscal,dz23);
1626
1627             /* Update vectorial force */
1628             fix2             = _mm_add_ps(fix2,tx);
1629             fiy2             = _mm_add_ps(fiy2,ty);
1630             fiz2             = _mm_add_ps(fiz2,tz);
1631
1632             fjx3             = _mm_add_ps(fjx3,tx);
1633             fjy3             = _mm_add_ps(fjy3,ty);
1634             fjz3             = _mm_add_ps(fjz3,tz);
1635             
1636             /**************************
1637              * CALCULATE INTERACTIONS *
1638              **************************/
1639
1640             /* COULOMB ELECTROSTATICS */
1641             velec            = _mm_mul_ps(qq31,rinv31);
1642             felec            = _mm_mul_ps(velec,rinvsq31);
1643
1644             fscal            = felec;
1645
1646             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1647
1648             /* Calculate temporary vectorial force */
1649             tx               = _mm_mul_ps(fscal,dx31);
1650             ty               = _mm_mul_ps(fscal,dy31);
1651             tz               = _mm_mul_ps(fscal,dz31);
1652
1653             /* Update vectorial force */
1654             fix3             = _mm_add_ps(fix3,tx);
1655             fiy3             = _mm_add_ps(fiy3,ty);
1656             fiz3             = _mm_add_ps(fiz3,tz);
1657
1658             fjx1             = _mm_add_ps(fjx1,tx);
1659             fjy1             = _mm_add_ps(fjy1,ty);
1660             fjz1             = _mm_add_ps(fjz1,tz);
1661             
1662             /**************************
1663              * CALCULATE INTERACTIONS *
1664              **************************/
1665
1666             /* COULOMB ELECTROSTATICS */
1667             velec            = _mm_mul_ps(qq32,rinv32);
1668             felec            = _mm_mul_ps(velec,rinvsq32);
1669
1670             fscal            = felec;
1671
1672             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1673
1674             /* Calculate temporary vectorial force */
1675             tx               = _mm_mul_ps(fscal,dx32);
1676             ty               = _mm_mul_ps(fscal,dy32);
1677             tz               = _mm_mul_ps(fscal,dz32);
1678
1679             /* Update vectorial force */
1680             fix3             = _mm_add_ps(fix3,tx);
1681             fiy3             = _mm_add_ps(fiy3,ty);
1682             fiz3             = _mm_add_ps(fiz3,tz);
1683
1684             fjx2             = _mm_add_ps(fjx2,tx);
1685             fjy2             = _mm_add_ps(fjy2,ty);
1686             fjz2             = _mm_add_ps(fjz2,tz);
1687             
1688             /**************************
1689              * CALCULATE INTERACTIONS *
1690              **************************/
1691
1692             /* COULOMB ELECTROSTATICS */
1693             velec            = _mm_mul_ps(qq33,rinv33);
1694             felec            = _mm_mul_ps(velec,rinvsq33);
1695
1696             fscal            = felec;
1697
1698             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1699
1700             /* Calculate temporary vectorial force */
1701             tx               = _mm_mul_ps(fscal,dx33);
1702             ty               = _mm_mul_ps(fscal,dy33);
1703             tz               = _mm_mul_ps(fscal,dz33);
1704
1705             /* Update vectorial force */
1706             fix3             = _mm_add_ps(fix3,tx);
1707             fiy3             = _mm_add_ps(fiy3,ty);
1708             fiz3             = _mm_add_ps(fiz3,tz);
1709
1710             fjx3             = _mm_add_ps(fjx3,tx);
1711             fjy3             = _mm_add_ps(fjy3,ty);
1712             fjz3             = _mm_add_ps(fjz3,tz);
1713             
1714             fjptrA             = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
1715             fjptrB             = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
1716             fjptrC             = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
1717             fjptrD             = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
1718
1719             gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA+DIM,fjptrB+DIM,fjptrC+DIM,fjptrD+DIM,
1720                                                    fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
1721
1722             /* Inner loop uses 243 flops */
1723         }
1724
1725         /* End of innermost loop */
1726
1727         gmx_mm_update_iforce_3atom_swizzle_ps(fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
1728                                               f+i_coord_offset+DIM,fshift+i_shift_offset);
1729
1730         /* Increment number of inner iterations */
1731         inneriter                  += j_index_end - j_index_start;
1732
1733         /* Outer loop uses 18 flops */
1734     }
1735
1736     /* Increment number of outer iterations */
1737     outeriter        += nri;
1738
1739     /* Update outer/inner flops */
1740
1741     inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W4W4_F,outeriter*18 + inneriter*243);
1742 }