d95cdb8cd93b0cc4f38a46599665eb94825f3b89
[alexxy/gromacs.git] / src / gromacs / gmxlib / nonbonded / nb_kernel_sse2_single / nb_kernel_ElecCoul_VdwNone_GeomW3W3_sse2_single.c
1 /*
2  * This file is part of the GROMACS molecular simulation package.
3  *
4  * Copyright (c) 2012,2013,2014, by the GROMACS development team, led by
5  * Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
6  * and including many others, as listed in the AUTHORS file in the
7  * top-level source directory and at http://www.gromacs.org.
8  *
9  * GROMACS is free software; you can redistribute it and/or
10  * modify it under the terms of the GNU Lesser General Public License
11  * as published by the Free Software Foundation; either version 2.1
12  * of the License, or (at your option) any later version.
13  *
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35 /*
36  * Note: this file was generated by the GROMACS sse2_single kernel generator.
37  */
38 #include "config.h"
39
40 #include <math.h>
41
42 #include "../nb_kernel.h"
43 #include "gromacs/legacyheaders/types/simple.h"
44 #include "gromacs/math/vec.h"
45 #include "gromacs/legacyheaders/nrnb.h"
46
47 #include "gromacs/simd/math_x86_sse2_single.h"
48 #include "kernelutil_x86_sse2_single.h"
49
50 /*
51  * Gromacs nonbonded kernel:   nb_kernel_ElecCoul_VdwNone_GeomW3W3_VF_sse2_single
52  * Electrostatics interaction: Coulomb
53  * VdW interaction:            None
54  * Geometry:                   Water3-Water3
55  * Calculate force/pot:        PotentialAndForce
56  */
57 void
58 nb_kernel_ElecCoul_VdwNone_GeomW3W3_VF_sse2_single
59                     (t_nblist                    * gmx_restrict       nlist,
60                      rvec                        * gmx_restrict          xx,
61                      rvec                        * gmx_restrict          ff,
62                      t_forcerec                  * gmx_restrict          fr,
63                      t_mdatoms                   * gmx_restrict     mdatoms,
64                      nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
65                      t_nrnb                      * gmx_restrict        nrnb)
66 {
67     /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or 
68      * just 0 for non-waters.
69      * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
70      * jnr indices corresponding to data put in the four positions in the SIMD register.
71      */
72     int              i_shift_offset,i_coord_offset,outeriter,inneriter;
73     int              j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
74     int              jnrA,jnrB,jnrC,jnrD;
75     int              jnrlistA,jnrlistB,jnrlistC,jnrlistD;
76     int              j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
77     int              *iinr,*jindex,*jjnr,*shiftidx,*gid;
78     real             rcutoff_scalar;
79     real             *shiftvec,*fshift,*x,*f;
80     real             *fjptrA,*fjptrB,*fjptrC,*fjptrD;
81     real             scratch[4*DIM];
82     __m128           tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
83     int              vdwioffset0;
84     __m128           ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
85     int              vdwioffset1;
86     __m128           ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
87     int              vdwioffset2;
88     __m128           ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
89     int              vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
90     __m128           jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
91     int              vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
92     __m128           jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
93     int              vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
94     __m128           jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
95     __m128           dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
96     __m128           dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
97     __m128           dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
98     __m128           dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
99     __m128           dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
100     __m128           dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
101     __m128           dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
102     __m128           dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
103     __m128           dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
104     __m128           velec,felec,velecsum,facel,crf,krf,krf2;
105     real             *charge;
106     __m128           dummy_mask,cutoff_mask;
107     __m128           signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
108     __m128           one     = _mm_set1_ps(1.0);
109     __m128           two     = _mm_set1_ps(2.0);
110     x                = xx[0];
111     f                = ff[0];
112
113     nri              = nlist->nri;
114     iinr             = nlist->iinr;
115     jindex           = nlist->jindex;
116     jjnr             = nlist->jjnr;
117     shiftidx         = nlist->shift;
118     gid              = nlist->gid;
119     shiftvec         = fr->shift_vec[0];
120     fshift           = fr->fshift[0];
121     facel            = _mm_set1_ps(fr->epsfac);
122     charge           = mdatoms->chargeA;
123
124     /* Setup water-specific parameters */
125     inr              = nlist->iinr[0];
126     iq0              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+0]));
127     iq1              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
128     iq2              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
129
130     jq0              = _mm_set1_ps(charge[inr+0]);
131     jq1              = _mm_set1_ps(charge[inr+1]);
132     jq2              = _mm_set1_ps(charge[inr+2]);
133     qq00             = _mm_mul_ps(iq0,jq0);
134     qq01             = _mm_mul_ps(iq0,jq1);
135     qq02             = _mm_mul_ps(iq0,jq2);
136     qq10             = _mm_mul_ps(iq1,jq0);
137     qq11             = _mm_mul_ps(iq1,jq1);
138     qq12             = _mm_mul_ps(iq1,jq2);
139     qq20             = _mm_mul_ps(iq2,jq0);
140     qq21             = _mm_mul_ps(iq2,jq1);
141     qq22             = _mm_mul_ps(iq2,jq2);
142
143     /* Avoid stupid compiler warnings */
144     jnrA = jnrB = jnrC = jnrD = 0;
145     j_coord_offsetA = 0;
146     j_coord_offsetB = 0;
147     j_coord_offsetC = 0;
148     j_coord_offsetD = 0;
149
150     outeriter        = 0;
151     inneriter        = 0;
152
153     for(iidx=0;iidx<4*DIM;iidx++)
154     {
155         scratch[iidx] = 0.0;
156     }  
157
158     /* Start outer loop over neighborlists */
159     for(iidx=0; iidx<nri; iidx++)
160     {
161         /* Load shift vector for this list */
162         i_shift_offset   = DIM*shiftidx[iidx];
163
164         /* Load limits for loop over neighbors */
165         j_index_start    = jindex[iidx];
166         j_index_end      = jindex[iidx+1];
167
168         /* Get outer coordinate index */
169         inr              = iinr[iidx];
170         i_coord_offset   = DIM*inr;
171
172         /* Load i particle coords and add shift vector */
173         gmx_mm_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset,
174                                                  &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
175         
176         fix0             = _mm_setzero_ps();
177         fiy0             = _mm_setzero_ps();
178         fiz0             = _mm_setzero_ps();
179         fix1             = _mm_setzero_ps();
180         fiy1             = _mm_setzero_ps();
181         fiz1             = _mm_setzero_ps();
182         fix2             = _mm_setzero_ps();
183         fiy2             = _mm_setzero_ps();
184         fiz2             = _mm_setzero_ps();
185
186         /* Reset potential sums */
187         velecsum         = _mm_setzero_ps();
188
189         /* Start inner kernel loop */
190         for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
191         {
192
193             /* Get j neighbor index, and coordinate index */
194             jnrA             = jjnr[jidx];
195             jnrB             = jjnr[jidx+1];
196             jnrC             = jjnr[jidx+2];
197             jnrD             = jjnr[jidx+3];
198             j_coord_offsetA  = DIM*jnrA;
199             j_coord_offsetB  = DIM*jnrB;
200             j_coord_offsetC  = DIM*jnrC;
201             j_coord_offsetD  = DIM*jnrD;
202
203             /* load j atom coordinates */
204             gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
205                                               x+j_coord_offsetC,x+j_coord_offsetD,
206                                               &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
207
208             /* Calculate displacement vector */
209             dx00             = _mm_sub_ps(ix0,jx0);
210             dy00             = _mm_sub_ps(iy0,jy0);
211             dz00             = _mm_sub_ps(iz0,jz0);
212             dx01             = _mm_sub_ps(ix0,jx1);
213             dy01             = _mm_sub_ps(iy0,jy1);
214             dz01             = _mm_sub_ps(iz0,jz1);
215             dx02             = _mm_sub_ps(ix0,jx2);
216             dy02             = _mm_sub_ps(iy0,jy2);
217             dz02             = _mm_sub_ps(iz0,jz2);
218             dx10             = _mm_sub_ps(ix1,jx0);
219             dy10             = _mm_sub_ps(iy1,jy0);
220             dz10             = _mm_sub_ps(iz1,jz0);
221             dx11             = _mm_sub_ps(ix1,jx1);
222             dy11             = _mm_sub_ps(iy1,jy1);
223             dz11             = _mm_sub_ps(iz1,jz1);
224             dx12             = _mm_sub_ps(ix1,jx2);
225             dy12             = _mm_sub_ps(iy1,jy2);
226             dz12             = _mm_sub_ps(iz1,jz2);
227             dx20             = _mm_sub_ps(ix2,jx0);
228             dy20             = _mm_sub_ps(iy2,jy0);
229             dz20             = _mm_sub_ps(iz2,jz0);
230             dx21             = _mm_sub_ps(ix2,jx1);
231             dy21             = _mm_sub_ps(iy2,jy1);
232             dz21             = _mm_sub_ps(iz2,jz1);
233             dx22             = _mm_sub_ps(ix2,jx2);
234             dy22             = _mm_sub_ps(iy2,jy2);
235             dz22             = _mm_sub_ps(iz2,jz2);
236
237             /* Calculate squared distance and things based on it */
238             rsq00            = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
239             rsq01            = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
240             rsq02            = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
241             rsq10            = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
242             rsq11            = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
243             rsq12            = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
244             rsq20            = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
245             rsq21            = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
246             rsq22            = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
247
248             rinv00           = gmx_mm_invsqrt_ps(rsq00);
249             rinv01           = gmx_mm_invsqrt_ps(rsq01);
250             rinv02           = gmx_mm_invsqrt_ps(rsq02);
251             rinv10           = gmx_mm_invsqrt_ps(rsq10);
252             rinv11           = gmx_mm_invsqrt_ps(rsq11);
253             rinv12           = gmx_mm_invsqrt_ps(rsq12);
254             rinv20           = gmx_mm_invsqrt_ps(rsq20);
255             rinv21           = gmx_mm_invsqrt_ps(rsq21);
256             rinv22           = gmx_mm_invsqrt_ps(rsq22);
257
258             rinvsq00         = _mm_mul_ps(rinv00,rinv00);
259             rinvsq01         = _mm_mul_ps(rinv01,rinv01);
260             rinvsq02         = _mm_mul_ps(rinv02,rinv02);
261             rinvsq10         = _mm_mul_ps(rinv10,rinv10);
262             rinvsq11         = _mm_mul_ps(rinv11,rinv11);
263             rinvsq12         = _mm_mul_ps(rinv12,rinv12);
264             rinvsq20         = _mm_mul_ps(rinv20,rinv20);
265             rinvsq21         = _mm_mul_ps(rinv21,rinv21);
266             rinvsq22         = _mm_mul_ps(rinv22,rinv22);
267
268             fjx0             = _mm_setzero_ps();
269             fjy0             = _mm_setzero_ps();
270             fjz0             = _mm_setzero_ps();
271             fjx1             = _mm_setzero_ps();
272             fjy1             = _mm_setzero_ps();
273             fjz1             = _mm_setzero_ps();
274             fjx2             = _mm_setzero_ps();
275             fjy2             = _mm_setzero_ps();
276             fjz2             = _mm_setzero_ps();
277
278             /**************************
279              * CALCULATE INTERACTIONS *
280              **************************/
281
282             /* COULOMB ELECTROSTATICS */
283             velec            = _mm_mul_ps(qq00,rinv00);
284             felec            = _mm_mul_ps(velec,rinvsq00);
285
286             /* Update potential sum for this i atom from the interaction with this j atom. */
287             velecsum         = _mm_add_ps(velecsum,velec);
288
289             fscal            = felec;
290
291             /* Calculate temporary vectorial force */
292             tx               = _mm_mul_ps(fscal,dx00);
293             ty               = _mm_mul_ps(fscal,dy00);
294             tz               = _mm_mul_ps(fscal,dz00);
295
296             /* Update vectorial force */
297             fix0             = _mm_add_ps(fix0,tx);
298             fiy0             = _mm_add_ps(fiy0,ty);
299             fiz0             = _mm_add_ps(fiz0,tz);
300
301             fjx0             = _mm_add_ps(fjx0,tx);
302             fjy0             = _mm_add_ps(fjy0,ty);
303             fjz0             = _mm_add_ps(fjz0,tz);
304             
305             /**************************
306              * CALCULATE INTERACTIONS *
307              **************************/
308
309             /* COULOMB ELECTROSTATICS */
310             velec            = _mm_mul_ps(qq01,rinv01);
311             felec            = _mm_mul_ps(velec,rinvsq01);
312
313             /* Update potential sum for this i atom from the interaction with this j atom. */
314             velecsum         = _mm_add_ps(velecsum,velec);
315
316             fscal            = felec;
317
318             /* Calculate temporary vectorial force */
319             tx               = _mm_mul_ps(fscal,dx01);
320             ty               = _mm_mul_ps(fscal,dy01);
321             tz               = _mm_mul_ps(fscal,dz01);
322
323             /* Update vectorial force */
324             fix0             = _mm_add_ps(fix0,tx);
325             fiy0             = _mm_add_ps(fiy0,ty);
326             fiz0             = _mm_add_ps(fiz0,tz);
327
328             fjx1             = _mm_add_ps(fjx1,tx);
329             fjy1             = _mm_add_ps(fjy1,ty);
330             fjz1             = _mm_add_ps(fjz1,tz);
331             
332             /**************************
333              * CALCULATE INTERACTIONS *
334              **************************/
335
336             /* COULOMB ELECTROSTATICS */
337             velec            = _mm_mul_ps(qq02,rinv02);
338             felec            = _mm_mul_ps(velec,rinvsq02);
339
340             /* Update potential sum for this i atom from the interaction with this j atom. */
341             velecsum         = _mm_add_ps(velecsum,velec);
342
343             fscal            = felec;
344
345             /* Calculate temporary vectorial force */
346             tx               = _mm_mul_ps(fscal,dx02);
347             ty               = _mm_mul_ps(fscal,dy02);
348             tz               = _mm_mul_ps(fscal,dz02);
349
350             /* Update vectorial force */
351             fix0             = _mm_add_ps(fix0,tx);
352             fiy0             = _mm_add_ps(fiy0,ty);
353             fiz0             = _mm_add_ps(fiz0,tz);
354
355             fjx2             = _mm_add_ps(fjx2,tx);
356             fjy2             = _mm_add_ps(fjy2,ty);
357             fjz2             = _mm_add_ps(fjz2,tz);
358             
359             /**************************
360              * CALCULATE INTERACTIONS *
361              **************************/
362
363             /* COULOMB ELECTROSTATICS */
364             velec            = _mm_mul_ps(qq10,rinv10);
365             felec            = _mm_mul_ps(velec,rinvsq10);
366
367             /* Update potential sum for this i atom from the interaction with this j atom. */
368             velecsum         = _mm_add_ps(velecsum,velec);
369
370             fscal            = felec;
371
372             /* Calculate temporary vectorial force */
373             tx               = _mm_mul_ps(fscal,dx10);
374             ty               = _mm_mul_ps(fscal,dy10);
375             tz               = _mm_mul_ps(fscal,dz10);
376
377             /* Update vectorial force */
378             fix1             = _mm_add_ps(fix1,tx);
379             fiy1             = _mm_add_ps(fiy1,ty);
380             fiz1             = _mm_add_ps(fiz1,tz);
381
382             fjx0             = _mm_add_ps(fjx0,tx);
383             fjy0             = _mm_add_ps(fjy0,ty);
384             fjz0             = _mm_add_ps(fjz0,tz);
385             
386             /**************************
387              * CALCULATE INTERACTIONS *
388              **************************/
389
390             /* COULOMB ELECTROSTATICS */
391             velec            = _mm_mul_ps(qq11,rinv11);
392             felec            = _mm_mul_ps(velec,rinvsq11);
393
394             /* Update potential sum for this i atom from the interaction with this j atom. */
395             velecsum         = _mm_add_ps(velecsum,velec);
396
397             fscal            = felec;
398
399             /* Calculate temporary vectorial force */
400             tx               = _mm_mul_ps(fscal,dx11);
401             ty               = _mm_mul_ps(fscal,dy11);
402             tz               = _mm_mul_ps(fscal,dz11);
403
404             /* Update vectorial force */
405             fix1             = _mm_add_ps(fix1,tx);
406             fiy1             = _mm_add_ps(fiy1,ty);
407             fiz1             = _mm_add_ps(fiz1,tz);
408
409             fjx1             = _mm_add_ps(fjx1,tx);
410             fjy1             = _mm_add_ps(fjy1,ty);
411             fjz1             = _mm_add_ps(fjz1,tz);
412             
413             /**************************
414              * CALCULATE INTERACTIONS *
415              **************************/
416
417             /* COULOMB ELECTROSTATICS */
418             velec            = _mm_mul_ps(qq12,rinv12);
419             felec            = _mm_mul_ps(velec,rinvsq12);
420
421             /* Update potential sum for this i atom from the interaction with this j atom. */
422             velecsum         = _mm_add_ps(velecsum,velec);
423
424             fscal            = felec;
425
426             /* Calculate temporary vectorial force */
427             tx               = _mm_mul_ps(fscal,dx12);
428             ty               = _mm_mul_ps(fscal,dy12);
429             tz               = _mm_mul_ps(fscal,dz12);
430
431             /* Update vectorial force */
432             fix1             = _mm_add_ps(fix1,tx);
433             fiy1             = _mm_add_ps(fiy1,ty);
434             fiz1             = _mm_add_ps(fiz1,tz);
435
436             fjx2             = _mm_add_ps(fjx2,tx);
437             fjy2             = _mm_add_ps(fjy2,ty);
438             fjz2             = _mm_add_ps(fjz2,tz);
439             
440             /**************************
441              * CALCULATE INTERACTIONS *
442              **************************/
443
444             /* COULOMB ELECTROSTATICS */
445             velec            = _mm_mul_ps(qq20,rinv20);
446             felec            = _mm_mul_ps(velec,rinvsq20);
447
448             /* Update potential sum for this i atom from the interaction with this j atom. */
449             velecsum         = _mm_add_ps(velecsum,velec);
450
451             fscal            = felec;
452
453             /* Calculate temporary vectorial force */
454             tx               = _mm_mul_ps(fscal,dx20);
455             ty               = _mm_mul_ps(fscal,dy20);
456             tz               = _mm_mul_ps(fscal,dz20);
457
458             /* Update vectorial force */
459             fix2             = _mm_add_ps(fix2,tx);
460             fiy2             = _mm_add_ps(fiy2,ty);
461             fiz2             = _mm_add_ps(fiz2,tz);
462
463             fjx0             = _mm_add_ps(fjx0,tx);
464             fjy0             = _mm_add_ps(fjy0,ty);
465             fjz0             = _mm_add_ps(fjz0,tz);
466             
467             /**************************
468              * CALCULATE INTERACTIONS *
469              **************************/
470
471             /* COULOMB ELECTROSTATICS */
472             velec            = _mm_mul_ps(qq21,rinv21);
473             felec            = _mm_mul_ps(velec,rinvsq21);
474
475             /* Update potential sum for this i atom from the interaction with this j atom. */
476             velecsum         = _mm_add_ps(velecsum,velec);
477
478             fscal            = felec;
479
480             /* Calculate temporary vectorial force */
481             tx               = _mm_mul_ps(fscal,dx21);
482             ty               = _mm_mul_ps(fscal,dy21);
483             tz               = _mm_mul_ps(fscal,dz21);
484
485             /* Update vectorial force */
486             fix2             = _mm_add_ps(fix2,tx);
487             fiy2             = _mm_add_ps(fiy2,ty);
488             fiz2             = _mm_add_ps(fiz2,tz);
489
490             fjx1             = _mm_add_ps(fjx1,tx);
491             fjy1             = _mm_add_ps(fjy1,ty);
492             fjz1             = _mm_add_ps(fjz1,tz);
493             
494             /**************************
495              * CALCULATE INTERACTIONS *
496              **************************/
497
498             /* COULOMB ELECTROSTATICS */
499             velec            = _mm_mul_ps(qq22,rinv22);
500             felec            = _mm_mul_ps(velec,rinvsq22);
501
502             /* Update potential sum for this i atom from the interaction with this j atom. */
503             velecsum         = _mm_add_ps(velecsum,velec);
504
505             fscal            = felec;
506
507             /* Calculate temporary vectorial force */
508             tx               = _mm_mul_ps(fscal,dx22);
509             ty               = _mm_mul_ps(fscal,dy22);
510             tz               = _mm_mul_ps(fscal,dz22);
511
512             /* Update vectorial force */
513             fix2             = _mm_add_ps(fix2,tx);
514             fiy2             = _mm_add_ps(fiy2,ty);
515             fiz2             = _mm_add_ps(fiz2,tz);
516
517             fjx2             = _mm_add_ps(fjx2,tx);
518             fjy2             = _mm_add_ps(fjy2,ty);
519             fjz2             = _mm_add_ps(fjz2,tz);
520             
521             fjptrA             = f+j_coord_offsetA;
522             fjptrB             = f+j_coord_offsetB;
523             fjptrC             = f+j_coord_offsetC;
524             fjptrD             = f+j_coord_offsetD;
525
526             gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
527                                                    fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
528
529             /* Inner loop uses 252 flops */
530         }
531
532         if(jidx<j_index_end)
533         {
534
535             /* Get j neighbor index, and coordinate index */
536             jnrlistA         = jjnr[jidx];
537             jnrlistB         = jjnr[jidx+1];
538             jnrlistC         = jjnr[jidx+2];
539             jnrlistD         = jjnr[jidx+3];
540             /* Sign of each element will be negative for non-real atoms.
541              * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
542              * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
543              */
544             dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
545             jnrA       = (jnrlistA>=0) ? jnrlistA : 0;
546             jnrB       = (jnrlistB>=0) ? jnrlistB : 0;
547             jnrC       = (jnrlistC>=0) ? jnrlistC : 0;
548             jnrD       = (jnrlistD>=0) ? jnrlistD : 0;
549             j_coord_offsetA  = DIM*jnrA;
550             j_coord_offsetB  = DIM*jnrB;
551             j_coord_offsetC  = DIM*jnrC;
552             j_coord_offsetD  = DIM*jnrD;
553
554             /* load j atom coordinates */
555             gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
556                                               x+j_coord_offsetC,x+j_coord_offsetD,
557                                               &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
558
559             /* Calculate displacement vector */
560             dx00             = _mm_sub_ps(ix0,jx0);
561             dy00             = _mm_sub_ps(iy0,jy0);
562             dz00             = _mm_sub_ps(iz0,jz0);
563             dx01             = _mm_sub_ps(ix0,jx1);
564             dy01             = _mm_sub_ps(iy0,jy1);
565             dz01             = _mm_sub_ps(iz0,jz1);
566             dx02             = _mm_sub_ps(ix0,jx2);
567             dy02             = _mm_sub_ps(iy0,jy2);
568             dz02             = _mm_sub_ps(iz0,jz2);
569             dx10             = _mm_sub_ps(ix1,jx0);
570             dy10             = _mm_sub_ps(iy1,jy0);
571             dz10             = _mm_sub_ps(iz1,jz0);
572             dx11             = _mm_sub_ps(ix1,jx1);
573             dy11             = _mm_sub_ps(iy1,jy1);
574             dz11             = _mm_sub_ps(iz1,jz1);
575             dx12             = _mm_sub_ps(ix1,jx2);
576             dy12             = _mm_sub_ps(iy1,jy2);
577             dz12             = _mm_sub_ps(iz1,jz2);
578             dx20             = _mm_sub_ps(ix2,jx0);
579             dy20             = _mm_sub_ps(iy2,jy0);
580             dz20             = _mm_sub_ps(iz2,jz0);
581             dx21             = _mm_sub_ps(ix2,jx1);
582             dy21             = _mm_sub_ps(iy2,jy1);
583             dz21             = _mm_sub_ps(iz2,jz1);
584             dx22             = _mm_sub_ps(ix2,jx2);
585             dy22             = _mm_sub_ps(iy2,jy2);
586             dz22             = _mm_sub_ps(iz2,jz2);
587
588             /* Calculate squared distance and things based on it */
589             rsq00            = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
590             rsq01            = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
591             rsq02            = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
592             rsq10            = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
593             rsq11            = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
594             rsq12            = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
595             rsq20            = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
596             rsq21            = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
597             rsq22            = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
598
599             rinv00           = gmx_mm_invsqrt_ps(rsq00);
600             rinv01           = gmx_mm_invsqrt_ps(rsq01);
601             rinv02           = gmx_mm_invsqrt_ps(rsq02);
602             rinv10           = gmx_mm_invsqrt_ps(rsq10);
603             rinv11           = gmx_mm_invsqrt_ps(rsq11);
604             rinv12           = gmx_mm_invsqrt_ps(rsq12);
605             rinv20           = gmx_mm_invsqrt_ps(rsq20);
606             rinv21           = gmx_mm_invsqrt_ps(rsq21);
607             rinv22           = gmx_mm_invsqrt_ps(rsq22);
608
609             rinvsq00         = _mm_mul_ps(rinv00,rinv00);
610             rinvsq01         = _mm_mul_ps(rinv01,rinv01);
611             rinvsq02         = _mm_mul_ps(rinv02,rinv02);
612             rinvsq10         = _mm_mul_ps(rinv10,rinv10);
613             rinvsq11         = _mm_mul_ps(rinv11,rinv11);
614             rinvsq12         = _mm_mul_ps(rinv12,rinv12);
615             rinvsq20         = _mm_mul_ps(rinv20,rinv20);
616             rinvsq21         = _mm_mul_ps(rinv21,rinv21);
617             rinvsq22         = _mm_mul_ps(rinv22,rinv22);
618
619             fjx0             = _mm_setzero_ps();
620             fjy0             = _mm_setzero_ps();
621             fjz0             = _mm_setzero_ps();
622             fjx1             = _mm_setzero_ps();
623             fjy1             = _mm_setzero_ps();
624             fjz1             = _mm_setzero_ps();
625             fjx2             = _mm_setzero_ps();
626             fjy2             = _mm_setzero_ps();
627             fjz2             = _mm_setzero_ps();
628
629             /**************************
630              * CALCULATE INTERACTIONS *
631              **************************/
632
633             /* COULOMB ELECTROSTATICS */
634             velec            = _mm_mul_ps(qq00,rinv00);
635             felec            = _mm_mul_ps(velec,rinvsq00);
636
637             /* Update potential sum for this i atom from the interaction with this j atom. */
638             velec            = _mm_andnot_ps(dummy_mask,velec);
639             velecsum         = _mm_add_ps(velecsum,velec);
640
641             fscal            = felec;
642
643             fscal            = _mm_andnot_ps(dummy_mask,fscal);
644
645             /* Calculate temporary vectorial force */
646             tx               = _mm_mul_ps(fscal,dx00);
647             ty               = _mm_mul_ps(fscal,dy00);
648             tz               = _mm_mul_ps(fscal,dz00);
649
650             /* Update vectorial force */
651             fix0             = _mm_add_ps(fix0,tx);
652             fiy0             = _mm_add_ps(fiy0,ty);
653             fiz0             = _mm_add_ps(fiz0,tz);
654
655             fjx0             = _mm_add_ps(fjx0,tx);
656             fjy0             = _mm_add_ps(fjy0,ty);
657             fjz0             = _mm_add_ps(fjz0,tz);
658             
659             /**************************
660              * CALCULATE INTERACTIONS *
661              **************************/
662
663             /* COULOMB ELECTROSTATICS */
664             velec            = _mm_mul_ps(qq01,rinv01);
665             felec            = _mm_mul_ps(velec,rinvsq01);
666
667             /* Update potential sum for this i atom from the interaction with this j atom. */
668             velec            = _mm_andnot_ps(dummy_mask,velec);
669             velecsum         = _mm_add_ps(velecsum,velec);
670
671             fscal            = felec;
672
673             fscal            = _mm_andnot_ps(dummy_mask,fscal);
674
675             /* Calculate temporary vectorial force */
676             tx               = _mm_mul_ps(fscal,dx01);
677             ty               = _mm_mul_ps(fscal,dy01);
678             tz               = _mm_mul_ps(fscal,dz01);
679
680             /* Update vectorial force */
681             fix0             = _mm_add_ps(fix0,tx);
682             fiy0             = _mm_add_ps(fiy0,ty);
683             fiz0             = _mm_add_ps(fiz0,tz);
684
685             fjx1             = _mm_add_ps(fjx1,tx);
686             fjy1             = _mm_add_ps(fjy1,ty);
687             fjz1             = _mm_add_ps(fjz1,tz);
688             
689             /**************************
690              * CALCULATE INTERACTIONS *
691              **************************/
692
693             /* COULOMB ELECTROSTATICS */
694             velec            = _mm_mul_ps(qq02,rinv02);
695             felec            = _mm_mul_ps(velec,rinvsq02);
696
697             /* Update potential sum for this i atom from the interaction with this j atom. */
698             velec            = _mm_andnot_ps(dummy_mask,velec);
699             velecsum         = _mm_add_ps(velecsum,velec);
700
701             fscal            = felec;
702
703             fscal            = _mm_andnot_ps(dummy_mask,fscal);
704
705             /* Calculate temporary vectorial force */
706             tx               = _mm_mul_ps(fscal,dx02);
707             ty               = _mm_mul_ps(fscal,dy02);
708             tz               = _mm_mul_ps(fscal,dz02);
709
710             /* Update vectorial force */
711             fix0             = _mm_add_ps(fix0,tx);
712             fiy0             = _mm_add_ps(fiy0,ty);
713             fiz0             = _mm_add_ps(fiz0,tz);
714
715             fjx2             = _mm_add_ps(fjx2,tx);
716             fjy2             = _mm_add_ps(fjy2,ty);
717             fjz2             = _mm_add_ps(fjz2,tz);
718             
719             /**************************
720              * CALCULATE INTERACTIONS *
721              **************************/
722
723             /* COULOMB ELECTROSTATICS */
724             velec            = _mm_mul_ps(qq10,rinv10);
725             felec            = _mm_mul_ps(velec,rinvsq10);
726
727             /* Update potential sum for this i atom from the interaction with this j atom. */
728             velec            = _mm_andnot_ps(dummy_mask,velec);
729             velecsum         = _mm_add_ps(velecsum,velec);
730
731             fscal            = felec;
732
733             fscal            = _mm_andnot_ps(dummy_mask,fscal);
734
735             /* Calculate temporary vectorial force */
736             tx               = _mm_mul_ps(fscal,dx10);
737             ty               = _mm_mul_ps(fscal,dy10);
738             tz               = _mm_mul_ps(fscal,dz10);
739
740             /* Update vectorial force */
741             fix1             = _mm_add_ps(fix1,tx);
742             fiy1             = _mm_add_ps(fiy1,ty);
743             fiz1             = _mm_add_ps(fiz1,tz);
744
745             fjx0             = _mm_add_ps(fjx0,tx);
746             fjy0             = _mm_add_ps(fjy0,ty);
747             fjz0             = _mm_add_ps(fjz0,tz);
748             
749             /**************************
750              * CALCULATE INTERACTIONS *
751              **************************/
752
753             /* COULOMB ELECTROSTATICS */
754             velec            = _mm_mul_ps(qq11,rinv11);
755             felec            = _mm_mul_ps(velec,rinvsq11);
756
757             /* Update potential sum for this i atom from the interaction with this j atom. */
758             velec            = _mm_andnot_ps(dummy_mask,velec);
759             velecsum         = _mm_add_ps(velecsum,velec);
760
761             fscal            = felec;
762
763             fscal            = _mm_andnot_ps(dummy_mask,fscal);
764
765             /* Calculate temporary vectorial force */
766             tx               = _mm_mul_ps(fscal,dx11);
767             ty               = _mm_mul_ps(fscal,dy11);
768             tz               = _mm_mul_ps(fscal,dz11);
769
770             /* Update vectorial force */
771             fix1             = _mm_add_ps(fix1,tx);
772             fiy1             = _mm_add_ps(fiy1,ty);
773             fiz1             = _mm_add_ps(fiz1,tz);
774
775             fjx1             = _mm_add_ps(fjx1,tx);
776             fjy1             = _mm_add_ps(fjy1,ty);
777             fjz1             = _mm_add_ps(fjz1,tz);
778             
779             /**************************
780              * CALCULATE INTERACTIONS *
781              **************************/
782
783             /* COULOMB ELECTROSTATICS */
784             velec            = _mm_mul_ps(qq12,rinv12);
785             felec            = _mm_mul_ps(velec,rinvsq12);
786
787             /* Update potential sum for this i atom from the interaction with this j atom. */
788             velec            = _mm_andnot_ps(dummy_mask,velec);
789             velecsum         = _mm_add_ps(velecsum,velec);
790
791             fscal            = felec;
792
793             fscal            = _mm_andnot_ps(dummy_mask,fscal);
794
795             /* Calculate temporary vectorial force */
796             tx               = _mm_mul_ps(fscal,dx12);
797             ty               = _mm_mul_ps(fscal,dy12);
798             tz               = _mm_mul_ps(fscal,dz12);
799
800             /* Update vectorial force */
801             fix1             = _mm_add_ps(fix1,tx);
802             fiy1             = _mm_add_ps(fiy1,ty);
803             fiz1             = _mm_add_ps(fiz1,tz);
804
805             fjx2             = _mm_add_ps(fjx2,tx);
806             fjy2             = _mm_add_ps(fjy2,ty);
807             fjz2             = _mm_add_ps(fjz2,tz);
808             
809             /**************************
810              * CALCULATE INTERACTIONS *
811              **************************/
812
813             /* COULOMB ELECTROSTATICS */
814             velec            = _mm_mul_ps(qq20,rinv20);
815             felec            = _mm_mul_ps(velec,rinvsq20);
816
817             /* Update potential sum for this i atom from the interaction with this j atom. */
818             velec            = _mm_andnot_ps(dummy_mask,velec);
819             velecsum         = _mm_add_ps(velecsum,velec);
820
821             fscal            = felec;
822
823             fscal            = _mm_andnot_ps(dummy_mask,fscal);
824
825             /* Calculate temporary vectorial force */
826             tx               = _mm_mul_ps(fscal,dx20);
827             ty               = _mm_mul_ps(fscal,dy20);
828             tz               = _mm_mul_ps(fscal,dz20);
829
830             /* Update vectorial force */
831             fix2             = _mm_add_ps(fix2,tx);
832             fiy2             = _mm_add_ps(fiy2,ty);
833             fiz2             = _mm_add_ps(fiz2,tz);
834
835             fjx0             = _mm_add_ps(fjx0,tx);
836             fjy0             = _mm_add_ps(fjy0,ty);
837             fjz0             = _mm_add_ps(fjz0,tz);
838             
839             /**************************
840              * CALCULATE INTERACTIONS *
841              **************************/
842
843             /* COULOMB ELECTROSTATICS */
844             velec            = _mm_mul_ps(qq21,rinv21);
845             felec            = _mm_mul_ps(velec,rinvsq21);
846
847             /* Update potential sum for this i atom from the interaction with this j atom. */
848             velec            = _mm_andnot_ps(dummy_mask,velec);
849             velecsum         = _mm_add_ps(velecsum,velec);
850
851             fscal            = felec;
852
853             fscal            = _mm_andnot_ps(dummy_mask,fscal);
854
855             /* Calculate temporary vectorial force */
856             tx               = _mm_mul_ps(fscal,dx21);
857             ty               = _mm_mul_ps(fscal,dy21);
858             tz               = _mm_mul_ps(fscal,dz21);
859
860             /* Update vectorial force */
861             fix2             = _mm_add_ps(fix2,tx);
862             fiy2             = _mm_add_ps(fiy2,ty);
863             fiz2             = _mm_add_ps(fiz2,tz);
864
865             fjx1             = _mm_add_ps(fjx1,tx);
866             fjy1             = _mm_add_ps(fjy1,ty);
867             fjz1             = _mm_add_ps(fjz1,tz);
868             
869             /**************************
870              * CALCULATE INTERACTIONS *
871              **************************/
872
873             /* COULOMB ELECTROSTATICS */
874             velec            = _mm_mul_ps(qq22,rinv22);
875             felec            = _mm_mul_ps(velec,rinvsq22);
876
877             /* Update potential sum for this i atom from the interaction with this j atom. */
878             velec            = _mm_andnot_ps(dummy_mask,velec);
879             velecsum         = _mm_add_ps(velecsum,velec);
880
881             fscal            = felec;
882
883             fscal            = _mm_andnot_ps(dummy_mask,fscal);
884
885             /* Calculate temporary vectorial force */
886             tx               = _mm_mul_ps(fscal,dx22);
887             ty               = _mm_mul_ps(fscal,dy22);
888             tz               = _mm_mul_ps(fscal,dz22);
889
890             /* Update vectorial force */
891             fix2             = _mm_add_ps(fix2,tx);
892             fiy2             = _mm_add_ps(fiy2,ty);
893             fiz2             = _mm_add_ps(fiz2,tz);
894
895             fjx2             = _mm_add_ps(fjx2,tx);
896             fjy2             = _mm_add_ps(fjy2,ty);
897             fjz2             = _mm_add_ps(fjz2,tz);
898             
899             fjptrA             = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
900             fjptrB             = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
901             fjptrC             = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
902             fjptrD             = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
903
904             gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
905                                                    fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
906
907             /* Inner loop uses 252 flops */
908         }
909
910         /* End of innermost loop */
911
912         gmx_mm_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
913                                               f+i_coord_offset,fshift+i_shift_offset);
914
915         ggid                        = gid[iidx];
916         /* Update potential energies */
917         gmx_mm_update_1pot_ps(velecsum,kernel_data->energygrp_elec+ggid);
918
919         /* Increment number of inner iterations */
920         inneriter                  += j_index_end - j_index_start;
921
922         /* Outer loop uses 19 flops */
923     }
924
925     /* Increment number of outer iterations */
926     outeriter        += nri;
927
928     /* Update outer/inner flops */
929
930     inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W3W3_VF,outeriter*19 + inneriter*252);
931 }
932 /*
933  * Gromacs nonbonded kernel:   nb_kernel_ElecCoul_VdwNone_GeomW3W3_F_sse2_single
934  * Electrostatics interaction: Coulomb
935  * VdW interaction:            None
936  * Geometry:                   Water3-Water3
937  * Calculate force/pot:        Force
938  */
939 void
940 nb_kernel_ElecCoul_VdwNone_GeomW3W3_F_sse2_single
941                     (t_nblist                    * gmx_restrict       nlist,
942                      rvec                        * gmx_restrict          xx,
943                      rvec                        * gmx_restrict          ff,
944                      t_forcerec                  * gmx_restrict          fr,
945                      t_mdatoms                   * gmx_restrict     mdatoms,
946                      nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
947                      t_nrnb                      * gmx_restrict        nrnb)
948 {
949     /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or 
950      * just 0 for non-waters.
951      * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
952      * jnr indices corresponding to data put in the four positions in the SIMD register.
953      */
954     int              i_shift_offset,i_coord_offset,outeriter,inneriter;
955     int              j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
956     int              jnrA,jnrB,jnrC,jnrD;
957     int              jnrlistA,jnrlistB,jnrlistC,jnrlistD;
958     int              j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
959     int              *iinr,*jindex,*jjnr,*shiftidx,*gid;
960     real             rcutoff_scalar;
961     real             *shiftvec,*fshift,*x,*f;
962     real             *fjptrA,*fjptrB,*fjptrC,*fjptrD;
963     real             scratch[4*DIM];
964     __m128           tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
965     int              vdwioffset0;
966     __m128           ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
967     int              vdwioffset1;
968     __m128           ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
969     int              vdwioffset2;
970     __m128           ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
971     int              vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
972     __m128           jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
973     int              vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
974     __m128           jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
975     int              vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
976     __m128           jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
977     __m128           dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
978     __m128           dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
979     __m128           dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
980     __m128           dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
981     __m128           dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
982     __m128           dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
983     __m128           dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
984     __m128           dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
985     __m128           dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
986     __m128           velec,felec,velecsum,facel,crf,krf,krf2;
987     real             *charge;
988     __m128           dummy_mask,cutoff_mask;
989     __m128           signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
990     __m128           one     = _mm_set1_ps(1.0);
991     __m128           two     = _mm_set1_ps(2.0);
992     x                = xx[0];
993     f                = ff[0];
994
995     nri              = nlist->nri;
996     iinr             = nlist->iinr;
997     jindex           = nlist->jindex;
998     jjnr             = nlist->jjnr;
999     shiftidx         = nlist->shift;
1000     gid              = nlist->gid;
1001     shiftvec         = fr->shift_vec[0];
1002     fshift           = fr->fshift[0];
1003     facel            = _mm_set1_ps(fr->epsfac);
1004     charge           = mdatoms->chargeA;
1005
1006     /* Setup water-specific parameters */
1007     inr              = nlist->iinr[0];
1008     iq0              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+0]));
1009     iq1              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
1010     iq2              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
1011
1012     jq0              = _mm_set1_ps(charge[inr+0]);
1013     jq1              = _mm_set1_ps(charge[inr+1]);
1014     jq2              = _mm_set1_ps(charge[inr+2]);
1015     qq00             = _mm_mul_ps(iq0,jq0);
1016     qq01             = _mm_mul_ps(iq0,jq1);
1017     qq02             = _mm_mul_ps(iq0,jq2);
1018     qq10             = _mm_mul_ps(iq1,jq0);
1019     qq11             = _mm_mul_ps(iq1,jq1);
1020     qq12             = _mm_mul_ps(iq1,jq2);
1021     qq20             = _mm_mul_ps(iq2,jq0);
1022     qq21             = _mm_mul_ps(iq2,jq1);
1023     qq22             = _mm_mul_ps(iq2,jq2);
1024
1025     /* Avoid stupid compiler warnings */
1026     jnrA = jnrB = jnrC = jnrD = 0;
1027     j_coord_offsetA = 0;
1028     j_coord_offsetB = 0;
1029     j_coord_offsetC = 0;
1030     j_coord_offsetD = 0;
1031
1032     outeriter        = 0;
1033     inneriter        = 0;
1034
1035     for(iidx=0;iidx<4*DIM;iidx++)
1036     {
1037         scratch[iidx] = 0.0;
1038     }  
1039
1040     /* Start outer loop over neighborlists */
1041     for(iidx=0; iidx<nri; iidx++)
1042     {
1043         /* Load shift vector for this list */
1044         i_shift_offset   = DIM*shiftidx[iidx];
1045
1046         /* Load limits for loop over neighbors */
1047         j_index_start    = jindex[iidx];
1048         j_index_end      = jindex[iidx+1];
1049
1050         /* Get outer coordinate index */
1051         inr              = iinr[iidx];
1052         i_coord_offset   = DIM*inr;
1053
1054         /* Load i particle coords and add shift vector */
1055         gmx_mm_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset,
1056                                                  &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
1057         
1058         fix0             = _mm_setzero_ps();
1059         fiy0             = _mm_setzero_ps();
1060         fiz0             = _mm_setzero_ps();
1061         fix1             = _mm_setzero_ps();
1062         fiy1             = _mm_setzero_ps();
1063         fiz1             = _mm_setzero_ps();
1064         fix2             = _mm_setzero_ps();
1065         fiy2             = _mm_setzero_ps();
1066         fiz2             = _mm_setzero_ps();
1067
1068         /* Start inner kernel loop */
1069         for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
1070         {
1071
1072             /* Get j neighbor index, and coordinate index */
1073             jnrA             = jjnr[jidx];
1074             jnrB             = jjnr[jidx+1];
1075             jnrC             = jjnr[jidx+2];
1076             jnrD             = jjnr[jidx+3];
1077             j_coord_offsetA  = DIM*jnrA;
1078             j_coord_offsetB  = DIM*jnrB;
1079             j_coord_offsetC  = DIM*jnrC;
1080             j_coord_offsetD  = DIM*jnrD;
1081
1082             /* load j atom coordinates */
1083             gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1084                                               x+j_coord_offsetC,x+j_coord_offsetD,
1085                                               &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1086
1087             /* Calculate displacement vector */
1088             dx00             = _mm_sub_ps(ix0,jx0);
1089             dy00             = _mm_sub_ps(iy0,jy0);
1090             dz00             = _mm_sub_ps(iz0,jz0);
1091             dx01             = _mm_sub_ps(ix0,jx1);
1092             dy01             = _mm_sub_ps(iy0,jy1);
1093             dz01             = _mm_sub_ps(iz0,jz1);
1094             dx02             = _mm_sub_ps(ix0,jx2);
1095             dy02             = _mm_sub_ps(iy0,jy2);
1096             dz02             = _mm_sub_ps(iz0,jz2);
1097             dx10             = _mm_sub_ps(ix1,jx0);
1098             dy10             = _mm_sub_ps(iy1,jy0);
1099             dz10             = _mm_sub_ps(iz1,jz0);
1100             dx11             = _mm_sub_ps(ix1,jx1);
1101             dy11             = _mm_sub_ps(iy1,jy1);
1102             dz11             = _mm_sub_ps(iz1,jz1);
1103             dx12             = _mm_sub_ps(ix1,jx2);
1104             dy12             = _mm_sub_ps(iy1,jy2);
1105             dz12             = _mm_sub_ps(iz1,jz2);
1106             dx20             = _mm_sub_ps(ix2,jx0);
1107             dy20             = _mm_sub_ps(iy2,jy0);
1108             dz20             = _mm_sub_ps(iz2,jz0);
1109             dx21             = _mm_sub_ps(ix2,jx1);
1110             dy21             = _mm_sub_ps(iy2,jy1);
1111             dz21             = _mm_sub_ps(iz2,jz1);
1112             dx22             = _mm_sub_ps(ix2,jx2);
1113             dy22             = _mm_sub_ps(iy2,jy2);
1114             dz22             = _mm_sub_ps(iz2,jz2);
1115
1116             /* Calculate squared distance and things based on it */
1117             rsq00            = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
1118             rsq01            = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
1119             rsq02            = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
1120             rsq10            = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
1121             rsq11            = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1122             rsq12            = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1123             rsq20            = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
1124             rsq21            = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1125             rsq22            = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1126
1127             rinv00           = gmx_mm_invsqrt_ps(rsq00);
1128             rinv01           = gmx_mm_invsqrt_ps(rsq01);
1129             rinv02           = gmx_mm_invsqrt_ps(rsq02);
1130             rinv10           = gmx_mm_invsqrt_ps(rsq10);
1131             rinv11           = gmx_mm_invsqrt_ps(rsq11);
1132             rinv12           = gmx_mm_invsqrt_ps(rsq12);
1133             rinv20           = gmx_mm_invsqrt_ps(rsq20);
1134             rinv21           = gmx_mm_invsqrt_ps(rsq21);
1135             rinv22           = gmx_mm_invsqrt_ps(rsq22);
1136
1137             rinvsq00         = _mm_mul_ps(rinv00,rinv00);
1138             rinvsq01         = _mm_mul_ps(rinv01,rinv01);
1139             rinvsq02         = _mm_mul_ps(rinv02,rinv02);
1140             rinvsq10         = _mm_mul_ps(rinv10,rinv10);
1141             rinvsq11         = _mm_mul_ps(rinv11,rinv11);
1142             rinvsq12         = _mm_mul_ps(rinv12,rinv12);
1143             rinvsq20         = _mm_mul_ps(rinv20,rinv20);
1144             rinvsq21         = _mm_mul_ps(rinv21,rinv21);
1145             rinvsq22         = _mm_mul_ps(rinv22,rinv22);
1146
1147             fjx0             = _mm_setzero_ps();
1148             fjy0             = _mm_setzero_ps();
1149             fjz0             = _mm_setzero_ps();
1150             fjx1             = _mm_setzero_ps();
1151             fjy1             = _mm_setzero_ps();
1152             fjz1             = _mm_setzero_ps();
1153             fjx2             = _mm_setzero_ps();
1154             fjy2             = _mm_setzero_ps();
1155             fjz2             = _mm_setzero_ps();
1156
1157             /**************************
1158              * CALCULATE INTERACTIONS *
1159              **************************/
1160
1161             /* COULOMB ELECTROSTATICS */
1162             velec            = _mm_mul_ps(qq00,rinv00);
1163             felec            = _mm_mul_ps(velec,rinvsq00);
1164
1165             fscal            = felec;
1166
1167             /* Calculate temporary vectorial force */
1168             tx               = _mm_mul_ps(fscal,dx00);
1169             ty               = _mm_mul_ps(fscal,dy00);
1170             tz               = _mm_mul_ps(fscal,dz00);
1171
1172             /* Update vectorial force */
1173             fix0             = _mm_add_ps(fix0,tx);
1174             fiy0             = _mm_add_ps(fiy0,ty);
1175             fiz0             = _mm_add_ps(fiz0,tz);
1176
1177             fjx0             = _mm_add_ps(fjx0,tx);
1178             fjy0             = _mm_add_ps(fjy0,ty);
1179             fjz0             = _mm_add_ps(fjz0,tz);
1180             
1181             /**************************
1182              * CALCULATE INTERACTIONS *
1183              **************************/
1184
1185             /* COULOMB ELECTROSTATICS */
1186             velec            = _mm_mul_ps(qq01,rinv01);
1187             felec            = _mm_mul_ps(velec,rinvsq01);
1188
1189             fscal            = felec;
1190
1191             /* Calculate temporary vectorial force */
1192             tx               = _mm_mul_ps(fscal,dx01);
1193             ty               = _mm_mul_ps(fscal,dy01);
1194             tz               = _mm_mul_ps(fscal,dz01);
1195
1196             /* Update vectorial force */
1197             fix0             = _mm_add_ps(fix0,tx);
1198             fiy0             = _mm_add_ps(fiy0,ty);
1199             fiz0             = _mm_add_ps(fiz0,tz);
1200
1201             fjx1             = _mm_add_ps(fjx1,tx);
1202             fjy1             = _mm_add_ps(fjy1,ty);
1203             fjz1             = _mm_add_ps(fjz1,tz);
1204             
1205             /**************************
1206              * CALCULATE INTERACTIONS *
1207              **************************/
1208
1209             /* COULOMB ELECTROSTATICS */
1210             velec            = _mm_mul_ps(qq02,rinv02);
1211             felec            = _mm_mul_ps(velec,rinvsq02);
1212
1213             fscal            = felec;
1214
1215             /* Calculate temporary vectorial force */
1216             tx               = _mm_mul_ps(fscal,dx02);
1217             ty               = _mm_mul_ps(fscal,dy02);
1218             tz               = _mm_mul_ps(fscal,dz02);
1219
1220             /* Update vectorial force */
1221             fix0             = _mm_add_ps(fix0,tx);
1222             fiy0             = _mm_add_ps(fiy0,ty);
1223             fiz0             = _mm_add_ps(fiz0,tz);
1224
1225             fjx2             = _mm_add_ps(fjx2,tx);
1226             fjy2             = _mm_add_ps(fjy2,ty);
1227             fjz2             = _mm_add_ps(fjz2,tz);
1228             
1229             /**************************
1230              * CALCULATE INTERACTIONS *
1231              **************************/
1232
1233             /* COULOMB ELECTROSTATICS */
1234             velec            = _mm_mul_ps(qq10,rinv10);
1235             felec            = _mm_mul_ps(velec,rinvsq10);
1236
1237             fscal            = felec;
1238
1239             /* Calculate temporary vectorial force */
1240             tx               = _mm_mul_ps(fscal,dx10);
1241             ty               = _mm_mul_ps(fscal,dy10);
1242             tz               = _mm_mul_ps(fscal,dz10);
1243
1244             /* Update vectorial force */
1245             fix1             = _mm_add_ps(fix1,tx);
1246             fiy1             = _mm_add_ps(fiy1,ty);
1247             fiz1             = _mm_add_ps(fiz1,tz);
1248
1249             fjx0             = _mm_add_ps(fjx0,tx);
1250             fjy0             = _mm_add_ps(fjy0,ty);
1251             fjz0             = _mm_add_ps(fjz0,tz);
1252             
1253             /**************************
1254              * CALCULATE INTERACTIONS *
1255              **************************/
1256
1257             /* COULOMB ELECTROSTATICS */
1258             velec            = _mm_mul_ps(qq11,rinv11);
1259             felec            = _mm_mul_ps(velec,rinvsq11);
1260
1261             fscal            = felec;
1262
1263             /* Calculate temporary vectorial force */
1264             tx               = _mm_mul_ps(fscal,dx11);
1265             ty               = _mm_mul_ps(fscal,dy11);
1266             tz               = _mm_mul_ps(fscal,dz11);
1267
1268             /* Update vectorial force */
1269             fix1             = _mm_add_ps(fix1,tx);
1270             fiy1             = _mm_add_ps(fiy1,ty);
1271             fiz1             = _mm_add_ps(fiz1,tz);
1272
1273             fjx1             = _mm_add_ps(fjx1,tx);
1274             fjy1             = _mm_add_ps(fjy1,ty);
1275             fjz1             = _mm_add_ps(fjz1,tz);
1276             
1277             /**************************
1278              * CALCULATE INTERACTIONS *
1279              **************************/
1280
1281             /* COULOMB ELECTROSTATICS */
1282             velec            = _mm_mul_ps(qq12,rinv12);
1283             felec            = _mm_mul_ps(velec,rinvsq12);
1284
1285             fscal            = felec;
1286
1287             /* Calculate temporary vectorial force */
1288             tx               = _mm_mul_ps(fscal,dx12);
1289             ty               = _mm_mul_ps(fscal,dy12);
1290             tz               = _mm_mul_ps(fscal,dz12);
1291
1292             /* Update vectorial force */
1293             fix1             = _mm_add_ps(fix1,tx);
1294             fiy1             = _mm_add_ps(fiy1,ty);
1295             fiz1             = _mm_add_ps(fiz1,tz);
1296
1297             fjx2             = _mm_add_ps(fjx2,tx);
1298             fjy2             = _mm_add_ps(fjy2,ty);
1299             fjz2             = _mm_add_ps(fjz2,tz);
1300             
1301             /**************************
1302              * CALCULATE INTERACTIONS *
1303              **************************/
1304
1305             /* COULOMB ELECTROSTATICS */
1306             velec            = _mm_mul_ps(qq20,rinv20);
1307             felec            = _mm_mul_ps(velec,rinvsq20);
1308
1309             fscal            = felec;
1310
1311             /* Calculate temporary vectorial force */
1312             tx               = _mm_mul_ps(fscal,dx20);
1313             ty               = _mm_mul_ps(fscal,dy20);
1314             tz               = _mm_mul_ps(fscal,dz20);
1315
1316             /* Update vectorial force */
1317             fix2             = _mm_add_ps(fix2,tx);
1318             fiy2             = _mm_add_ps(fiy2,ty);
1319             fiz2             = _mm_add_ps(fiz2,tz);
1320
1321             fjx0             = _mm_add_ps(fjx0,tx);
1322             fjy0             = _mm_add_ps(fjy0,ty);
1323             fjz0             = _mm_add_ps(fjz0,tz);
1324             
1325             /**************************
1326              * CALCULATE INTERACTIONS *
1327              **************************/
1328
1329             /* COULOMB ELECTROSTATICS */
1330             velec            = _mm_mul_ps(qq21,rinv21);
1331             felec            = _mm_mul_ps(velec,rinvsq21);
1332
1333             fscal            = felec;
1334
1335             /* Calculate temporary vectorial force */
1336             tx               = _mm_mul_ps(fscal,dx21);
1337             ty               = _mm_mul_ps(fscal,dy21);
1338             tz               = _mm_mul_ps(fscal,dz21);
1339
1340             /* Update vectorial force */
1341             fix2             = _mm_add_ps(fix2,tx);
1342             fiy2             = _mm_add_ps(fiy2,ty);
1343             fiz2             = _mm_add_ps(fiz2,tz);
1344
1345             fjx1             = _mm_add_ps(fjx1,tx);
1346             fjy1             = _mm_add_ps(fjy1,ty);
1347             fjz1             = _mm_add_ps(fjz1,tz);
1348             
1349             /**************************
1350              * CALCULATE INTERACTIONS *
1351              **************************/
1352
1353             /* COULOMB ELECTROSTATICS */
1354             velec            = _mm_mul_ps(qq22,rinv22);
1355             felec            = _mm_mul_ps(velec,rinvsq22);
1356
1357             fscal            = felec;
1358
1359             /* Calculate temporary vectorial force */
1360             tx               = _mm_mul_ps(fscal,dx22);
1361             ty               = _mm_mul_ps(fscal,dy22);
1362             tz               = _mm_mul_ps(fscal,dz22);
1363
1364             /* Update vectorial force */
1365             fix2             = _mm_add_ps(fix2,tx);
1366             fiy2             = _mm_add_ps(fiy2,ty);
1367             fiz2             = _mm_add_ps(fiz2,tz);
1368
1369             fjx2             = _mm_add_ps(fjx2,tx);
1370             fjy2             = _mm_add_ps(fjy2,ty);
1371             fjz2             = _mm_add_ps(fjz2,tz);
1372             
1373             fjptrA             = f+j_coord_offsetA;
1374             fjptrB             = f+j_coord_offsetB;
1375             fjptrC             = f+j_coord_offsetC;
1376             fjptrD             = f+j_coord_offsetD;
1377
1378             gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
1379                                                    fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1380
1381             /* Inner loop uses 243 flops */
1382         }
1383
1384         if(jidx<j_index_end)
1385         {
1386
1387             /* Get j neighbor index, and coordinate index */
1388             jnrlistA         = jjnr[jidx];
1389             jnrlistB         = jjnr[jidx+1];
1390             jnrlistC         = jjnr[jidx+2];
1391             jnrlistD         = jjnr[jidx+3];
1392             /* Sign of each element will be negative for non-real atoms.
1393              * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
1394              * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
1395              */
1396             dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
1397             jnrA       = (jnrlistA>=0) ? jnrlistA : 0;
1398             jnrB       = (jnrlistB>=0) ? jnrlistB : 0;
1399             jnrC       = (jnrlistC>=0) ? jnrlistC : 0;
1400             jnrD       = (jnrlistD>=0) ? jnrlistD : 0;
1401             j_coord_offsetA  = DIM*jnrA;
1402             j_coord_offsetB  = DIM*jnrB;
1403             j_coord_offsetC  = DIM*jnrC;
1404             j_coord_offsetD  = DIM*jnrD;
1405
1406             /* load j atom coordinates */
1407             gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1408                                               x+j_coord_offsetC,x+j_coord_offsetD,
1409                                               &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1410
1411             /* Calculate displacement vector */
1412             dx00             = _mm_sub_ps(ix0,jx0);
1413             dy00             = _mm_sub_ps(iy0,jy0);
1414             dz00             = _mm_sub_ps(iz0,jz0);
1415             dx01             = _mm_sub_ps(ix0,jx1);
1416             dy01             = _mm_sub_ps(iy0,jy1);
1417             dz01             = _mm_sub_ps(iz0,jz1);
1418             dx02             = _mm_sub_ps(ix0,jx2);
1419             dy02             = _mm_sub_ps(iy0,jy2);
1420             dz02             = _mm_sub_ps(iz0,jz2);
1421             dx10             = _mm_sub_ps(ix1,jx0);
1422             dy10             = _mm_sub_ps(iy1,jy0);
1423             dz10             = _mm_sub_ps(iz1,jz0);
1424             dx11             = _mm_sub_ps(ix1,jx1);
1425             dy11             = _mm_sub_ps(iy1,jy1);
1426             dz11             = _mm_sub_ps(iz1,jz1);
1427             dx12             = _mm_sub_ps(ix1,jx2);
1428             dy12             = _mm_sub_ps(iy1,jy2);
1429             dz12             = _mm_sub_ps(iz1,jz2);
1430             dx20             = _mm_sub_ps(ix2,jx0);
1431             dy20             = _mm_sub_ps(iy2,jy0);
1432             dz20             = _mm_sub_ps(iz2,jz0);
1433             dx21             = _mm_sub_ps(ix2,jx1);
1434             dy21             = _mm_sub_ps(iy2,jy1);
1435             dz21             = _mm_sub_ps(iz2,jz1);
1436             dx22             = _mm_sub_ps(ix2,jx2);
1437             dy22             = _mm_sub_ps(iy2,jy2);
1438             dz22             = _mm_sub_ps(iz2,jz2);
1439
1440             /* Calculate squared distance and things based on it */
1441             rsq00            = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
1442             rsq01            = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
1443             rsq02            = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
1444             rsq10            = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
1445             rsq11            = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1446             rsq12            = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1447             rsq20            = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
1448             rsq21            = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1449             rsq22            = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1450
1451             rinv00           = gmx_mm_invsqrt_ps(rsq00);
1452             rinv01           = gmx_mm_invsqrt_ps(rsq01);
1453             rinv02           = gmx_mm_invsqrt_ps(rsq02);
1454             rinv10           = gmx_mm_invsqrt_ps(rsq10);
1455             rinv11           = gmx_mm_invsqrt_ps(rsq11);
1456             rinv12           = gmx_mm_invsqrt_ps(rsq12);
1457             rinv20           = gmx_mm_invsqrt_ps(rsq20);
1458             rinv21           = gmx_mm_invsqrt_ps(rsq21);
1459             rinv22           = gmx_mm_invsqrt_ps(rsq22);
1460
1461             rinvsq00         = _mm_mul_ps(rinv00,rinv00);
1462             rinvsq01         = _mm_mul_ps(rinv01,rinv01);
1463             rinvsq02         = _mm_mul_ps(rinv02,rinv02);
1464             rinvsq10         = _mm_mul_ps(rinv10,rinv10);
1465             rinvsq11         = _mm_mul_ps(rinv11,rinv11);
1466             rinvsq12         = _mm_mul_ps(rinv12,rinv12);
1467             rinvsq20         = _mm_mul_ps(rinv20,rinv20);
1468             rinvsq21         = _mm_mul_ps(rinv21,rinv21);
1469             rinvsq22         = _mm_mul_ps(rinv22,rinv22);
1470
1471             fjx0             = _mm_setzero_ps();
1472             fjy0             = _mm_setzero_ps();
1473             fjz0             = _mm_setzero_ps();
1474             fjx1             = _mm_setzero_ps();
1475             fjy1             = _mm_setzero_ps();
1476             fjz1             = _mm_setzero_ps();
1477             fjx2             = _mm_setzero_ps();
1478             fjy2             = _mm_setzero_ps();
1479             fjz2             = _mm_setzero_ps();
1480
1481             /**************************
1482              * CALCULATE INTERACTIONS *
1483              **************************/
1484
1485             /* COULOMB ELECTROSTATICS */
1486             velec            = _mm_mul_ps(qq00,rinv00);
1487             felec            = _mm_mul_ps(velec,rinvsq00);
1488
1489             fscal            = felec;
1490
1491             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1492
1493             /* Calculate temporary vectorial force */
1494             tx               = _mm_mul_ps(fscal,dx00);
1495             ty               = _mm_mul_ps(fscal,dy00);
1496             tz               = _mm_mul_ps(fscal,dz00);
1497
1498             /* Update vectorial force */
1499             fix0             = _mm_add_ps(fix0,tx);
1500             fiy0             = _mm_add_ps(fiy0,ty);
1501             fiz0             = _mm_add_ps(fiz0,tz);
1502
1503             fjx0             = _mm_add_ps(fjx0,tx);
1504             fjy0             = _mm_add_ps(fjy0,ty);
1505             fjz0             = _mm_add_ps(fjz0,tz);
1506             
1507             /**************************
1508              * CALCULATE INTERACTIONS *
1509              **************************/
1510
1511             /* COULOMB ELECTROSTATICS */
1512             velec            = _mm_mul_ps(qq01,rinv01);
1513             felec            = _mm_mul_ps(velec,rinvsq01);
1514
1515             fscal            = felec;
1516
1517             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1518
1519             /* Calculate temporary vectorial force */
1520             tx               = _mm_mul_ps(fscal,dx01);
1521             ty               = _mm_mul_ps(fscal,dy01);
1522             tz               = _mm_mul_ps(fscal,dz01);
1523
1524             /* Update vectorial force */
1525             fix0             = _mm_add_ps(fix0,tx);
1526             fiy0             = _mm_add_ps(fiy0,ty);
1527             fiz0             = _mm_add_ps(fiz0,tz);
1528
1529             fjx1             = _mm_add_ps(fjx1,tx);
1530             fjy1             = _mm_add_ps(fjy1,ty);
1531             fjz1             = _mm_add_ps(fjz1,tz);
1532             
1533             /**************************
1534              * CALCULATE INTERACTIONS *
1535              **************************/
1536
1537             /* COULOMB ELECTROSTATICS */
1538             velec            = _mm_mul_ps(qq02,rinv02);
1539             felec            = _mm_mul_ps(velec,rinvsq02);
1540
1541             fscal            = felec;
1542
1543             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1544
1545             /* Calculate temporary vectorial force */
1546             tx               = _mm_mul_ps(fscal,dx02);
1547             ty               = _mm_mul_ps(fscal,dy02);
1548             tz               = _mm_mul_ps(fscal,dz02);
1549
1550             /* Update vectorial force */
1551             fix0             = _mm_add_ps(fix0,tx);
1552             fiy0             = _mm_add_ps(fiy0,ty);
1553             fiz0             = _mm_add_ps(fiz0,tz);
1554
1555             fjx2             = _mm_add_ps(fjx2,tx);
1556             fjy2             = _mm_add_ps(fjy2,ty);
1557             fjz2             = _mm_add_ps(fjz2,tz);
1558             
1559             /**************************
1560              * CALCULATE INTERACTIONS *
1561              **************************/
1562
1563             /* COULOMB ELECTROSTATICS */
1564             velec            = _mm_mul_ps(qq10,rinv10);
1565             felec            = _mm_mul_ps(velec,rinvsq10);
1566
1567             fscal            = felec;
1568
1569             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1570
1571             /* Calculate temporary vectorial force */
1572             tx               = _mm_mul_ps(fscal,dx10);
1573             ty               = _mm_mul_ps(fscal,dy10);
1574             tz               = _mm_mul_ps(fscal,dz10);
1575
1576             /* Update vectorial force */
1577             fix1             = _mm_add_ps(fix1,tx);
1578             fiy1             = _mm_add_ps(fiy1,ty);
1579             fiz1             = _mm_add_ps(fiz1,tz);
1580
1581             fjx0             = _mm_add_ps(fjx0,tx);
1582             fjy0             = _mm_add_ps(fjy0,ty);
1583             fjz0             = _mm_add_ps(fjz0,tz);
1584             
1585             /**************************
1586              * CALCULATE INTERACTIONS *
1587              **************************/
1588
1589             /* COULOMB ELECTROSTATICS */
1590             velec            = _mm_mul_ps(qq11,rinv11);
1591             felec            = _mm_mul_ps(velec,rinvsq11);
1592
1593             fscal            = felec;
1594
1595             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1596
1597             /* Calculate temporary vectorial force */
1598             tx               = _mm_mul_ps(fscal,dx11);
1599             ty               = _mm_mul_ps(fscal,dy11);
1600             tz               = _mm_mul_ps(fscal,dz11);
1601
1602             /* Update vectorial force */
1603             fix1             = _mm_add_ps(fix1,tx);
1604             fiy1             = _mm_add_ps(fiy1,ty);
1605             fiz1             = _mm_add_ps(fiz1,tz);
1606
1607             fjx1             = _mm_add_ps(fjx1,tx);
1608             fjy1             = _mm_add_ps(fjy1,ty);
1609             fjz1             = _mm_add_ps(fjz1,tz);
1610             
1611             /**************************
1612              * CALCULATE INTERACTIONS *
1613              **************************/
1614
1615             /* COULOMB ELECTROSTATICS */
1616             velec            = _mm_mul_ps(qq12,rinv12);
1617             felec            = _mm_mul_ps(velec,rinvsq12);
1618
1619             fscal            = felec;
1620
1621             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1622
1623             /* Calculate temporary vectorial force */
1624             tx               = _mm_mul_ps(fscal,dx12);
1625             ty               = _mm_mul_ps(fscal,dy12);
1626             tz               = _mm_mul_ps(fscal,dz12);
1627
1628             /* Update vectorial force */
1629             fix1             = _mm_add_ps(fix1,tx);
1630             fiy1             = _mm_add_ps(fiy1,ty);
1631             fiz1             = _mm_add_ps(fiz1,tz);
1632
1633             fjx2             = _mm_add_ps(fjx2,tx);
1634             fjy2             = _mm_add_ps(fjy2,ty);
1635             fjz2             = _mm_add_ps(fjz2,tz);
1636             
1637             /**************************
1638              * CALCULATE INTERACTIONS *
1639              **************************/
1640
1641             /* COULOMB ELECTROSTATICS */
1642             velec            = _mm_mul_ps(qq20,rinv20);
1643             felec            = _mm_mul_ps(velec,rinvsq20);
1644
1645             fscal            = felec;
1646
1647             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1648
1649             /* Calculate temporary vectorial force */
1650             tx               = _mm_mul_ps(fscal,dx20);
1651             ty               = _mm_mul_ps(fscal,dy20);
1652             tz               = _mm_mul_ps(fscal,dz20);
1653
1654             /* Update vectorial force */
1655             fix2             = _mm_add_ps(fix2,tx);
1656             fiy2             = _mm_add_ps(fiy2,ty);
1657             fiz2             = _mm_add_ps(fiz2,tz);
1658
1659             fjx0             = _mm_add_ps(fjx0,tx);
1660             fjy0             = _mm_add_ps(fjy0,ty);
1661             fjz0             = _mm_add_ps(fjz0,tz);
1662             
1663             /**************************
1664              * CALCULATE INTERACTIONS *
1665              **************************/
1666
1667             /* COULOMB ELECTROSTATICS */
1668             velec            = _mm_mul_ps(qq21,rinv21);
1669             felec            = _mm_mul_ps(velec,rinvsq21);
1670
1671             fscal            = felec;
1672
1673             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1674
1675             /* Calculate temporary vectorial force */
1676             tx               = _mm_mul_ps(fscal,dx21);
1677             ty               = _mm_mul_ps(fscal,dy21);
1678             tz               = _mm_mul_ps(fscal,dz21);
1679
1680             /* Update vectorial force */
1681             fix2             = _mm_add_ps(fix2,tx);
1682             fiy2             = _mm_add_ps(fiy2,ty);
1683             fiz2             = _mm_add_ps(fiz2,tz);
1684
1685             fjx1             = _mm_add_ps(fjx1,tx);
1686             fjy1             = _mm_add_ps(fjy1,ty);
1687             fjz1             = _mm_add_ps(fjz1,tz);
1688             
1689             /**************************
1690              * CALCULATE INTERACTIONS *
1691              **************************/
1692
1693             /* COULOMB ELECTROSTATICS */
1694             velec            = _mm_mul_ps(qq22,rinv22);
1695             felec            = _mm_mul_ps(velec,rinvsq22);
1696
1697             fscal            = felec;
1698
1699             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1700
1701             /* Calculate temporary vectorial force */
1702             tx               = _mm_mul_ps(fscal,dx22);
1703             ty               = _mm_mul_ps(fscal,dy22);
1704             tz               = _mm_mul_ps(fscal,dz22);
1705
1706             /* Update vectorial force */
1707             fix2             = _mm_add_ps(fix2,tx);
1708             fiy2             = _mm_add_ps(fiy2,ty);
1709             fiz2             = _mm_add_ps(fiz2,tz);
1710
1711             fjx2             = _mm_add_ps(fjx2,tx);
1712             fjy2             = _mm_add_ps(fjy2,ty);
1713             fjz2             = _mm_add_ps(fjz2,tz);
1714             
1715             fjptrA             = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
1716             fjptrB             = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
1717             fjptrC             = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
1718             fjptrD             = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
1719
1720             gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
1721                                                    fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1722
1723             /* Inner loop uses 243 flops */
1724         }
1725
1726         /* End of innermost loop */
1727
1728         gmx_mm_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1729                                               f+i_coord_offset,fshift+i_shift_offset);
1730
1731         /* Increment number of inner iterations */
1732         inneriter                  += j_index_end - j_index_start;
1733
1734         /* Outer loop uses 18 flops */
1735     }
1736
1737     /* Increment number of outer iterations */
1738     outeriter        += nri;
1739
1740     /* Update outer/inner flops */
1741
1742     inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W3W3_F,outeriter*18 + inneriter*243);
1743 }