2 * Note: this file was generated by the Gromacs sse2_single kernel generator.
4 * This source code is part of
8 * Copyright (c) 2001-2012, The GROMACS Development Team
10 * Gromacs is a library for molecular simulation and trajectory analysis,
11 * written by Erik Lindahl, David van der Spoel, Berk Hess, and others - for
12 * a full list of developers and information, check out http://www.gromacs.org
14 * This program is free software; you can redistribute it and/or modify it under
15 * the terms of the GNU Lesser General Public License as published by the Free
16 * Software Foundation; either version 2 of the License, or (at your option) any
19 * To help fund GROMACS development, we humbly ask that you cite
20 * the papers people have written on it - you can find them on the website.
28 #include "../nb_kernel.h"
29 #include "types/simple.h"
33 #include "gmx_math_x86_sse2_single.h"
34 #include "kernelutil_x86_sse2_single.h"
37 * Gromacs nonbonded kernel: nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_VF_sse2_single
38 * Electrostatics interaction: CubicSplineTable
39 * VdW interaction: LennardJones
40 * Geometry: Water3-Water3
41 * Calculate force/pot: PotentialAndForce
44 nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_VF_sse2_single
45 (t_nblist * gmx_restrict nlist,
46 rvec * gmx_restrict xx,
47 rvec * gmx_restrict ff,
48 t_forcerec * gmx_restrict fr,
49 t_mdatoms * gmx_restrict mdatoms,
50 nb_kernel_data_t * gmx_restrict kernel_data,
51 t_nrnb * gmx_restrict nrnb)
53 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
54 * just 0 for non-waters.
55 * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
56 * jnr indices corresponding to data put in the four positions in the SIMD register.
58 int i_shift_offset,i_coord_offset,outeriter,inneriter;
59 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
60 int jnrA,jnrB,jnrC,jnrD;
61 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
62 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
63 real shX,shY,shZ,rcutoff_scalar;
64 real *shiftvec,*fshift,*x,*f;
65 __m128 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
67 __m128 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
69 __m128 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
71 __m128 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
72 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
73 __m128 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
74 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
75 __m128 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
76 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
77 __m128 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
78 __m128 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
79 __m128 dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
80 __m128 dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
81 __m128 dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
82 __m128 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
83 __m128 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
84 __m128 dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
85 __m128 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
86 __m128 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
87 __m128 velec,felec,velecsum,facel,crf,krf,krf2;
90 __m128 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
93 __m128 one_sixth = _mm_set1_ps(1.0/6.0);
94 __m128 one_twelfth = _mm_set1_ps(1.0/12.0);
96 __m128i ifour = _mm_set1_epi32(4);
97 __m128 rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
99 __m128 dummy_mask,cutoff_mask;
100 __m128 signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
101 __m128 one = _mm_set1_ps(1.0);
102 __m128 two = _mm_set1_ps(2.0);
108 jindex = nlist->jindex;
110 shiftidx = nlist->shift;
112 shiftvec = fr->shift_vec[0];
113 fshift = fr->fshift[0];
114 facel = _mm_set1_ps(fr->epsfac);
115 charge = mdatoms->chargeA;
116 nvdwtype = fr->ntype;
118 vdwtype = mdatoms->typeA;
120 vftab = kernel_data->table_elec->data;
121 vftabscale = _mm_set1_ps(kernel_data->table_elec->scale);
123 /* Setup water-specific parameters */
124 inr = nlist->iinr[0];
125 iq0 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+0]));
126 iq1 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
127 iq2 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
128 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
130 jq0 = _mm_set1_ps(charge[inr+0]);
131 jq1 = _mm_set1_ps(charge[inr+1]);
132 jq2 = _mm_set1_ps(charge[inr+2]);
133 vdwjidx0A = 2*vdwtype[inr+0];
134 qq00 = _mm_mul_ps(iq0,jq0);
135 c6_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A]);
136 c12_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A+1]);
137 qq01 = _mm_mul_ps(iq0,jq1);
138 qq02 = _mm_mul_ps(iq0,jq2);
139 qq10 = _mm_mul_ps(iq1,jq0);
140 qq11 = _mm_mul_ps(iq1,jq1);
141 qq12 = _mm_mul_ps(iq1,jq2);
142 qq20 = _mm_mul_ps(iq2,jq0);
143 qq21 = _mm_mul_ps(iq2,jq1);
144 qq22 = _mm_mul_ps(iq2,jq2);
146 /* Avoid stupid compiler warnings */
147 jnrA = jnrB = jnrC = jnrD = 0;
156 /* Start outer loop over neighborlists */
157 for(iidx=0; iidx<nri; iidx++)
159 /* Load shift vector for this list */
160 i_shift_offset = DIM*shiftidx[iidx];
161 shX = shiftvec[i_shift_offset+XX];
162 shY = shiftvec[i_shift_offset+YY];
163 shZ = shiftvec[i_shift_offset+ZZ];
165 /* Load limits for loop over neighbors */
166 j_index_start = jindex[iidx];
167 j_index_end = jindex[iidx+1];
169 /* Get outer coordinate index */
171 i_coord_offset = DIM*inr;
173 /* Load i particle coords and add shift vector */
174 ix0 = _mm_set1_ps(shX + x[i_coord_offset+DIM*0+XX]);
175 iy0 = _mm_set1_ps(shY + x[i_coord_offset+DIM*0+YY]);
176 iz0 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*0+ZZ]);
177 ix1 = _mm_set1_ps(shX + x[i_coord_offset+DIM*1+XX]);
178 iy1 = _mm_set1_ps(shY + x[i_coord_offset+DIM*1+YY]);
179 iz1 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*1+ZZ]);
180 ix2 = _mm_set1_ps(shX + x[i_coord_offset+DIM*2+XX]);
181 iy2 = _mm_set1_ps(shY + x[i_coord_offset+DIM*2+YY]);
182 iz2 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*2+ZZ]);
184 fix0 = _mm_setzero_ps();
185 fiy0 = _mm_setzero_ps();
186 fiz0 = _mm_setzero_ps();
187 fix1 = _mm_setzero_ps();
188 fiy1 = _mm_setzero_ps();
189 fiz1 = _mm_setzero_ps();
190 fix2 = _mm_setzero_ps();
191 fiy2 = _mm_setzero_ps();
192 fiz2 = _mm_setzero_ps();
194 /* Reset potential sums */
195 velecsum = _mm_setzero_ps();
196 vvdwsum = _mm_setzero_ps();
198 /* Start inner kernel loop */
199 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
202 /* Get j neighbor index, and coordinate index */
208 j_coord_offsetA = DIM*jnrA;
209 j_coord_offsetB = DIM*jnrB;
210 j_coord_offsetC = DIM*jnrC;
211 j_coord_offsetD = DIM*jnrD;
213 /* load j atom coordinates */
214 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
215 x+j_coord_offsetC,x+j_coord_offsetD,
216 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
218 /* Calculate displacement vector */
219 dx00 = _mm_sub_ps(ix0,jx0);
220 dy00 = _mm_sub_ps(iy0,jy0);
221 dz00 = _mm_sub_ps(iz0,jz0);
222 dx01 = _mm_sub_ps(ix0,jx1);
223 dy01 = _mm_sub_ps(iy0,jy1);
224 dz01 = _mm_sub_ps(iz0,jz1);
225 dx02 = _mm_sub_ps(ix0,jx2);
226 dy02 = _mm_sub_ps(iy0,jy2);
227 dz02 = _mm_sub_ps(iz0,jz2);
228 dx10 = _mm_sub_ps(ix1,jx0);
229 dy10 = _mm_sub_ps(iy1,jy0);
230 dz10 = _mm_sub_ps(iz1,jz0);
231 dx11 = _mm_sub_ps(ix1,jx1);
232 dy11 = _mm_sub_ps(iy1,jy1);
233 dz11 = _mm_sub_ps(iz1,jz1);
234 dx12 = _mm_sub_ps(ix1,jx2);
235 dy12 = _mm_sub_ps(iy1,jy2);
236 dz12 = _mm_sub_ps(iz1,jz2);
237 dx20 = _mm_sub_ps(ix2,jx0);
238 dy20 = _mm_sub_ps(iy2,jy0);
239 dz20 = _mm_sub_ps(iz2,jz0);
240 dx21 = _mm_sub_ps(ix2,jx1);
241 dy21 = _mm_sub_ps(iy2,jy1);
242 dz21 = _mm_sub_ps(iz2,jz1);
243 dx22 = _mm_sub_ps(ix2,jx2);
244 dy22 = _mm_sub_ps(iy2,jy2);
245 dz22 = _mm_sub_ps(iz2,jz2);
247 /* Calculate squared distance and things based on it */
248 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
249 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
250 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
251 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
252 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
253 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
254 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
255 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
256 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
258 rinv00 = gmx_mm_invsqrt_ps(rsq00);
259 rinv01 = gmx_mm_invsqrt_ps(rsq01);
260 rinv02 = gmx_mm_invsqrt_ps(rsq02);
261 rinv10 = gmx_mm_invsqrt_ps(rsq10);
262 rinv11 = gmx_mm_invsqrt_ps(rsq11);
263 rinv12 = gmx_mm_invsqrt_ps(rsq12);
264 rinv20 = gmx_mm_invsqrt_ps(rsq20);
265 rinv21 = gmx_mm_invsqrt_ps(rsq21);
266 rinv22 = gmx_mm_invsqrt_ps(rsq22);
268 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
270 fjx0 = _mm_setzero_ps();
271 fjy0 = _mm_setzero_ps();
272 fjz0 = _mm_setzero_ps();
273 fjx1 = _mm_setzero_ps();
274 fjy1 = _mm_setzero_ps();
275 fjz1 = _mm_setzero_ps();
276 fjx2 = _mm_setzero_ps();
277 fjy2 = _mm_setzero_ps();
278 fjz2 = _mm_setzero_ps();
280 /**************************
281 * CALCULATE INTERACTIONS *
282 **************************/
284 r00 = _mm_mul_ps(rsq00,rinv00);
286 /* Calculate table index by multiplying r with table scale and truncate to integer */
287 rt = _mm_mul_ps(r00,vftabscale);
288 vfitab = _mm_cvttps_epi32(rt);
289 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
290 vfitab = _mm_slli_epi32(vfitab,2);
292 /* CUBIC SPLINE TABLE ELECTROSTATICS */
293 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
294 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
295 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
296 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
297 _MM_TRANSPOSE4_PS(Y,F,G,H);
298 Heps = _mm_mul_ps(vfeps,H);
299 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
300 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
301 velec = _mm_mul_ps(qq00,VV);
302 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
303 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq00,FF),_mm_mul_ps(vftabscale,rinv00)));
305 /* LENNARD-JONES DISPERSION/REPULSION */
307 rinvsix = _mm_mul_ps(_mm_mul_ps(rinvsq00,rinvsq00),rinvsq00);
308 vvdw6 = _mm_mul_ps(c6_00,rinvsix);
309 vvdw12 = _mm_mul_ps(c12_00,_mm_mul_ps(rinvsix,rinvsix));
310 vvdw = _mm_sub_ps( _mm_mul_ps(vvdw12,one_twelfth) , _mm_mul_ps(vvdw6,one_sixth) );
311 fvdw = _mm_mul_ps(_mm_sub_ps(vvdw12,vvdw6),rinvsq00);
313 /* Update potential sum for this i atom from the interaction with this j atom. */
314 velecsum = _mm_add_ps(velecsum,velec);
315 vvdwsum = _mm_add_ps(vvdwsum,vvdw);
317 fscal = _mm_add_ps(felec,fvdw);
319 /* Calculate temporary vectorial force */
320 tx = _mm_mul_ps(fscal,dx00);
321 ty = _mm_mul_ps(fscal,dy00);
322 tz = _mm_mul_ps(fscal,dz00);
324 /* Update vectorial force */
325 fix0 = _mm_add_ps(fix0,tx);
326 fiy0 = _mm_add_ps(fiy0,ty);
327 fiz0 = _mm_add_ps(fiz0,tz);
329 fjx0 = _mm_add_ps(fjx0,tx);
330 fjy0 = _mm_add_ps(fjy0,ty);
331 fjz0 = _mm_add_ps(fjz0,tz);
333 /**************************
334 * CALCULATE INTERACTIONS *
335 **************************/
337 r01 = _mm_mul_ps(rsq01,rinv01);
339 /* Calculate table index by multiplying r with table scale and truncate to integer */
340 rt = _mm_mul_ps(r01,vftabscale);
341 vfitab = _mm_cvttps_epi32(rt);
342 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
343 vfitab = _mm_slli_epi32(vfitab,2);
345 /* CUBIC SPLINE TABLE ELECTROSTATICS */
346 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
347 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
348 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
349 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
350 _MM_TRANSPOSE4_PS(Y,F,G,H);
351 Heps = _mm_mul_ps(vfeps,H);
352 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
353 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
354 velec = _mm_mul_ps(qq01,VV);
355 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
356 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq01,FF),_mm_mul_ps(vftabscale,rinv01)));
358 /* Update potential sum for this i atom from the interaction with this j atom. */
359 velecsum = _mm_add_ps(velecsum,velec);
363 /* Calculate temporary vectorial force */
364 tx = _mm_mul_ps(fscal,dx01);
365 ty = _mm_mul_ps(fscal,dy01);
366 tz = _mm_mul_ps(fscal,dz01);
368 /* Update vectorial force */
369 fix0 = _mm_add_ps(fix0,tx);
370 fiy0 = _mm_add_ps(fiy0,ty);
371 fiz0 = _mm_add_ps(fiz0,tz);
373 fjx1 = _mm_add_ps(fjx1,tx);
374 fjy1 = _mm_add_ps(fjy1,ty);
375 fjz1 = _mm_add_ps(fjz1,tz);
377 /**************************
378 * CALCULATE INTERACTIONS *
379 **************************/
381 r02 = _mm_mul_ps(rsq02,rinv02);
383 /* Calculate table index by multiplying r with table scale and truncate to integer */
384 rt = _mm_mul_ps(r02,vftabscale);
385 vfitab = _mm_cvttps_epi32(rt);
386 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
387 vfitab = _mm_slli_epi32(vfitab,2);
389 /* CUBIC SPLINE TABLE ELECTROSTATICS */
390 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
391 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
392 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
393 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
394 _MM_TRANSPOSE4_PS(Y,F,G,H);
395 Heps = _mm_mul_ps(vfeps,H);
396 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
397 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
398 velec = _mm_mul_ps(qq02,VV);
399 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
400 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq02,FF),_mm_mul_ps(vftabscale,rinv02)));
402 /* Update potential sum for this i atom from the interaction with this j atom. */
403 velecsum = _mm_add_ps(velecsum,velec);
407 /* Calculate temporary vectorial force */
408 tx = _mm_mul_ps(fscal,dx02);
409 ty = _mm_mul_ps(fscal,dy02);
410 tz = _mm_mul_ps(fscal,dz02);
412 /* Update vectorial force */
413 fix0 = _mm_add_ps(fix0,tx);
414 fiy0 = _mm_add_ps(fiy0,ty);
415 fiz0 = _mm_add_ps(fiz0,tz);
417 fjx2 = _mm_add_ps(fjx2,tx);
418 fjy2 = _mm_add_ps(fjy2,ty);
419 fjz2 = _mm_add_ps(fjz2,tz);
421 /**************************
422 * CALCULATE INTERACTIONS *
423 **************************/
425 r10 = _mm_mul_ps(rsq10,rinv10);
427 /* Calculate table index by multiplying r with table scale and truncate to integer */
428 rt = _mm_mul_ps(r10,vftabscale);
429 vfitab = _mm_cvttps_epi32(rt);
430 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
431 vfitab = _mm_slli_epi32(vfitab,2);
433 /* CUBIC SPLINE TABLE ELECTROSTATICS */
434 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
435 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
436 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
437 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
438 _MM_TRANSPOSE4_PS(Y,F,G,H);
439 Heps = _mm_mul_ps(vfeps,H);
440 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
441 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
442 velec = _mm_mul_ps(qq10,VV);
443 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
444 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq10,FF),_mm_mul_ps(vftabscale,rinv10)));
446 /* Update potential sum for this i atom from the interaction with this j atom. */
447 velecsum = _mm_add_ps(velecsum,velec);
451 /* Calculate temporary vectorial force */
452 tx = _mm_mul_ps(fscal,dx10);
453 ty = _mm_mul_ps(fscal,dy10);
454 tz = _mm_mul_ps(fscal,dz10);
456 /* Update vectorial force */
457 fix1 = _mm_add_ps(fix1,tx);
458 fiy1 = _mm_add_ps(fiy1,ty);
459 fiz1 = _mm_add_ps(fiz1,tz);
461 fjx0 = _mm_add_ps(fjx0,tx);
462 fjy0 = _mm_add_ps(fjy0,ty);
463 fjz0 = _mm_add_ps(fjz0,tz);
465 /**************************
466 * CALCULATE INTERACTIONS *
467 **************************/
469 r11 = _mm_mul_ps(rsq11,rinv11);
471 /* Calculate table index by multiplying r with table scale and truncate to integer */
472 rt = _mm_mul_ps(r11,vftabscale);
473 vfitab = _mm_cvttps_epi32(rt);
474 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
475 vfitab = _mm_slli_epi32(vfitab,2);
477 /* CUBIC SPLINE TABLE ELECTROSTATICS */
478 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
479 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
480 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
481 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
482 _MM_TRANSPOSE4_PS(Y,F,G,H);
483 Heps = _mm_mul_ps(vfeps,H);
484 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
485 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
486 velec = _mm_mul_ps(qq11,VV);
487 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
488 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq11,FF),_mm_mul_ps(vftabscale,rinv11)));
490 /* Update potential sum for this i atom from the interaction with this j atom. */
491 velecsum = _mm_add_ps(velecsum,velec);
495 /* Calculate temporary vectorial force */
496 tx = _mm_mul_ps(fscal,dx11);
497 ty = _mm_mul_ps(fscal,dy11);
498 tz = _mm_mul_ps(fscal,dz11);
500 /* Update vectorial force */
501 fix1 = _mm_add_ps(fix1,tx);
502 fiy1 = _mm_add_ps(fiy1,ty);
503 fiz1 = _mm_add_ps(fiz1,tz);
505 fjx1 = _mm_add_ps(fjx1,tx);
506 fjy1 = _mm_add_ps(fjy1,ty);
507 fjz1 = _mm_add_ps(fjz1,tz);
509 /**************************
510 * CALCULATE INTERACTIONS *
511 **************************/
513 r12 = _mm_mul_ps(rsq12,rinv12);
515 /* Calculate table index by multiplying r with table scale and truncate to integer */
516 rt = _mm_mul_ps(r12,vftabscale);
517 vfitab = _mm_cvttps_epi32(rt);
518 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
519 vfitab = _mm_slli_epi32(vfitab,2);
521 /* CUBIC SPLINE TABLE ELECTROSTATICS */
522 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
523 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
524 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
525 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
526 _MM_TRANSPOSE4_PS(Y,F,G,H);
527 Heps = _mm_mul_ps(vfeps,H);
528 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
529 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
530 velec = _mm_mul_ps(qq12,VV);
531 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
532 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq12,FF),_mm_mul_ps(vftabscale,rinv12)));
534 /* Update potential sum for this i atom from the interaction with this j atom. */
535 velecsum = _mm_add_ps(velecsum,velec);
539 /* Calculate temporary vectorial force */
540 tx = _mm_mul_ps(fscal,dx12);
541 ty = _mm_mul_ps(fscal,dy12);
542 tz = _mm_mul_ps(fscal,dz12);
544 /* Update vectorial force */
545 fix1 = _mm_add_ps(fix1,tx);
546 fiy1 = _mm_add_ps(fiy1,ty);
547 fiz1 = _mm_add_ps(fiz1,tz);
549 fjx2 = _mm_add_ps(fjx2,tx);
550 fjy2 = _mm_add_ps(fjy2,ty);
551 fjz2 = _mm_add_ps(fjz2,tz);
553 /**************************
554 * CALCULATE INTERACTIONS *
555 **************************/
557 r20 = _mm_mul_ps(rsq20,rinv20);
559 /* Calculate table index by multiplying r with table scale and truncate to integer */
560 rt = _mm_mul_ps(r20,vftabscale);
561 vfitab = _mm_cvttps_epi32(rt);
562 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
563 vfitab = _mm_slli_epi32(vfitab,2);
565 /* CUBIC SPLINE TABLE ELECTROSTATICS */
566 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
567 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
568 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
569 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
570 _MM_TRANSPOSE4_PS(Y,F,G,H);
571 Heps = _mm_mul_ps(vfeps,H);
572 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
573 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
574 velec = _mm_mul_ps(qq20,VV);
575 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
576 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq20,FF),_mm_mul_ps(vftabscale,rinv20)));
578 /* Update potential sum for this i atom from the interaction with this j atom. */
579 velecsum = _mm_add_ps(velecsum,velec);
583 /* Calculate temporary vectorial force */
584 tx = _mm_mul_ps(fscal,dx20);
585 ty = _mm_mul_ps(fscal,dy20);
586 tz = _mm_mul_ps(fscal,dz20);
588 /* Update vectorial force */
589 fix2 = _mm_add_ps(fix2,tx);
590 fiy2 = _mm_add_ps(fiy2,ty);
591 fiz2 = _mm_add_ps(fiz2,tz);
593 fjx0 = _mm_add_ps(fjx0,tx);
594 fjy0 = _mm_add_ps(fjy0,ty);
595 fjz0 = _mm_add_ps(fjz0,tz);
597 /**************************
598 * CALCULATE INTERACTIONS *
599 **************************/
601 r21 = _mm_mul_ps(rsq21,rinv21);
603 /* Calculate table index by multiplying r with table scale and truncate to integer */
604 rt = _mm_mul_ps(r21,vftabscale);
605 vfitab = _mm_cvttps_epi32(rt);
606 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
607 vfitab = _mm_slli_epi32(vfitab,2);
609 /* CUBIC SPLINE TABLE ELECTROSTATICS */
610 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
611 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
612 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
613 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
614 _MM_TRANSPOSE4_PS(Y,F,G,H);
615 Heps = _mm_mul_ps(vfeps,H);
616 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
617 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
618 velec = _mm_mul_ps(qq21,VV);
619 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
620 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq21,FF),_mm_mul_ps(vftabscale,rinv21)));
622 /* Update potential sum for this i atom from the interaction with this j atom. */
623 velecsum = _mm_add_ps(velecsum,velec);
627 /* Calculate temporary vectorial force */
628 tx = _mm_mul_ps(fscal,dx21);
629 ty = _mm_mul_ps(fscal,dy21);
630 tz = _mm_mul_ps(fscal,dz21);
632 /* Update vectorial force */
633 fix2 = _mm_add_ps(fix2,tx);
634 fiy2 = _mm_add_ps(fiy2,ty);
635 fiz2 = _mm_add_ps(fiz2,tz);
637 fjx1 = _mm_add_ps(fjx1,tx);
638 fjy1 = _mm_add_ps(fjy1,ty);
639 fjz1 = _mm_add_ps(fjz1,tz);
641 /**************************
642 * CALCULATE INTERACTIONS *
643 **************************/
645 r22 = _mm_mul_ps(rsq22,rinv22);
647 /* Calculate table index by multiplying r with table scale and truncate to integer */
648 rt = _mm_mul_ps(r22,vftabscale);
649 vfitab = _mm_cvttps_epi32(rt);
650 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
651 vfitab = _mm_slli_epi32(vfitab,2);
653 /* CUBIC SPLINE TABLE ELECTROSTATICS */
654 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
655 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
656 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
657 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
658 _MM_TRANSPOSE4_PS(Y,F,G,H);
659 Heps = _mm_mul_ps(vfeps,H);
660 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
661 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
662 velec = _mm_mul_ps(qq22,VV);
663 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
664 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq22,FF),_mm_mul_ps(vftabscale,rinv22)));
666 /* Update potential sum for this i atom from the interaction with this j atom. */
667 velecsum = _mm_add_ps(velecsum,velec);
671 /* Calculate temporary vectorial force */
672 tx = _mm_mul_ps(fscal,dx22);
673 ty = _mm_mul_ps(fscal,dy22);
674 tz = _mm_mul_ps(fscal,dz22);
676 /* Update vectorial force */
677 fix2 = _mm_add_ps(fix2,tx);
678 fiy2 = _mm_add_ps(fiy2,ty);
679 fiz2 = _mm_add_ps(fiz2,tz);
681 fjx2 = _mm_add_ps(fjx2,tx);
682 fjy2 = _mm_add_ps(fjy2,ty);
683 fjz2 = _mm_add_ps(fjz2,tz);
685 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
686 f+j_coord_offsetC,f+j_coord_offsetD,
687 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
689 /* Inner loop uses 400 flops */
695 /* Get j neighbor index, and coordinate index */
701 /* Sign of each element will be negative for non-real atoms.
702 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
703 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
705 dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
706 jnrA = (jnrA>=0) ? jnrA : 0;
707 jnrB = (jnrB>=0) ? jnrB : 0;
708 jnrC = (jnrC>=0) ? jnrC : 0;
709 jnrD = (jnrD>=0) ? jnrD : 0;
711 j_coord_offsetA = DIM*jnrA;
712 j_coord_offsetB = DIM*jnrB;
713 j_coord_offsetC = DIM*jnrC;
714 j_coord_offsetD = DIM*jnrD;
716 /* load j atom coordinates */
717 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
718 x+j_coord_offsetC,x+j_coord_offsetD,
719 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
721 /* Calculate displacement vector */
722 dx00 = _mm_sub_ps(ix0,jx0);
723 dy00 = _mm_sub_ps(iy0,jy0);
724 dz00 = _mm_sub_ps(iz0,jz0);
725 dx01 = _mm_sub_ps(ix0,jx1);
726 dy01 = _mm_sub_ps(iy0,jy1);
727 dz01 = _mm_sub_ps(iz0,jz1);
728 dx02 = _mm_sub_ps(ix0,jx2);
729 dy02 = _mm_sub_ps(iy0,jy2);
730 dz02 = _mm_sub_ps(iz0,jz2);
731 dx10 = _mm_sub_ps(ix1,jx0);
732 dy10 = _mm_sub_ps(iy1,jy0);
733 dz10 = _mm_sub_ps(iz1,jz0);
734 dx11 = _mm_sub_ps(ix1,jx1);
735 dy11 = _mm_sub_ps(iy1,jy1);
736 dz11 = _mm_sub_ps(iz1,jz1);
737 dx12 = _mm_sub_ps(ix1,jx2);
738 dy12 = _mm_sub_ps(iy1,jy2);
739 dz12 = _mm_sub_ps(iz1,jz2);
740 dx20 = _mm_sub_ps(ix2,jx0);
741 dy20 = _mm_sub_ps(iy2,jy0);
742 dz20 = _mm_sub_ps(iz2,jz0);
743 dx21 = _mm_sub_ps(ix2,jx1);
744 dy21 = _mm_sub_ps(iy2,jy1);
745 dz21 = _mm_sub_ps(iz2,jz1);
746 dx22 = _mm_sub_ps(ix2,jx2);
747 dy22 = _mm_sub_ps(iy2,jy2);
748 dz22 = _mm_sub_ps(iz2,jz2);
750 /* Calculate squared distance and things based on it */
751 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
752 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
753 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
754 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
755 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
756 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
757 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
758 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
759 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
761 rinv00 = gmx_mm_invsqrt_ps(rsq00);
762 rinv01 = gmx_mm_invsqrt_ps(rsq01);
763 rinv02 = gmx_mm_invsqrt_ps(rsq02);
764 rinv10 = gmx_mm_invsqrt_ps(rsq10);
765 rinv11 = gmx_mm_invsqrt_ps(rsq11);
766 rinv12 = gmx_mm_invsqrt_ps(rsq12);
767 rinv20 = gmx_mm_invsqrt_ps(rsq20);
768 rinv21 = gmx_mm_invsqrt_ps(rsq21);
769 rinv22 = gmx_mm_invsqrt_ps(rsq22);
771 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
773 fjx0 = _mm_setzero_ps();
774 fjy0 = _mm_setzero_ps();
775 fjz0 = _mm_setzero_ps();
776 fjx1 = _mm_setzero_ps();
777 fjy1 = _mm_setzero_ps();
778 fjz1 = _mm_setzero_ps();
779 fjx2 = _mm_setzero_ps();
780 fjy2 = _mm_setzero_ps();
781 fjz2 = _mm_setzero_ps();
783 /**************************
784 * CALCULATE INTERACTIONS *
785 **************************/
787 r00 = _mm_mul_ps(rsq00,rinv00);
788 r00 = _mm_andnot_ps(dummy_mask,r00);
790 /* Calculate table index by multiplying r with table scale and truncate to integer */
791 rt = _mm_mul_ps(r00,vftabscale);
792 vfitab = _mm_cvttps_epi32(rt);
793 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
794 vfitab = _mm_slli_epi32(vfitab,2);
796 /* CUBIC SPLINE TABLE ELECTROSTATICS */
797 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
798 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
799 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
800 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
801 _MM_TRANSPOSE4_PS(Y,F,G,H);
802 Heps = _mm_mul_ps(vfeps,H);
803 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
804 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
805 velec = _mm_mul_ps(qq00,VV);
806 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
807 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq00,FF),_mm_mul_ps(vftabscale,rinv00)));
809 /* LENNARD-JONES DISPERSION/REPULSION */
811 rinvsix = _mm_mul_ps(_mm_mul_ps(rinvsq00,rinvsq00),rinvsq00);
812 vvdw6 = _mm_mul_ps(c6_00,rinvsix);
813 vvdw12 = _mm_mul_ps(c12_00,_mm_mul_ps(rinvsix,rinvsix));
814 vvdw = _mm_sub_ps( _mm_mul_ps(vvdw12,one_twelfth) , _mm_mul_ps(vvdw6,one_sixth) );
815 fvdw = _mm_mul_ps(_mm_sub_ps(vvdw12,vvdw6),rinvsq00);
817 /* Update potential sum for this i atom from the interaction with this j atom. */
818 velec = _mm_andnot_ps(dummy_mask,velec);
819 velecsum = _mm_add_ps(velecsum,velec);
820 vvdw = _mm_andnot_ps(dummy_mask,vvdw);
821 vvdwsum = _mm_add_ps(vvdwsum,vvdw);
823 fscal = _mm_add_ps(felec,fvdw);
825 fscal = _mm_andnot_ps(dummy_mask,fscal);
827 /* Calculate temporary vectorial force */
828 tx = _mm_mul_ps(fscal,dx00);
829 ty = _mm_mul_ps(fscal,dy00);
830 tz = _mm_mul_ps(fscal,dz00);
832 /* Update vectorial force */
833 fix0 = _mm_add_ps(fix0,tx);
834 fiy0 = _mm_add_ps(fiy0,ty);
835 fiz0 = _mm_add_ps(fiz0,tz);
837 fjx0 = _mm_add_ps(fjx0,tx);
838 fjy0 = _mm_add_ps(fjy0,ty);
839 fjz0 = _mm_add_ps(fjz0,tz);
841 /**************************
842 * CALCULATE INTERACTIONS *
843 **************************/
845 r01 = _mm_mul_ps(rsq01,rinv01);
846 r01 = _mm_andnot_ps(dummy_mask,r01);
848 /* Calculate table index by multiplying r with table scale and truncate to integer */
849 rt = _mm_mul_ps(r01,vftabscale);
850 vfitab = _mm_cvttps_epi32(rt);
851 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
852 vfitab = _mm_slli_epi32(vfitab,2);
854 /* CUBIC SPLINE TABLE ELECTROSTATICS */
855 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
856 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
857 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
858 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
859 _MM_TRANSPOSE4_PS(Y,F,G,H);
860 Heps = _mm_mul_ps(vfeps,H);
861 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
862 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
863 velec = _mm_mul_ps(qq01,VV);
864 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
865 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq01,FF),_mm_mul_ps(vftabscale,rinv01)));
867 /* Update potential sum for this i atom from the interaction with this j atom. */
868 velec = _mm_andnot_ps(dummy_mask,velec);
869 velecsum = _mm_add_ps(velecsum,velec);
873 fscal = _mm_andnot_ps(dummy_mask,fscal);
875 /* Calculate temporary vectorial force */
876 tx = _mm_mul_ps(fscal,dx01);
877 ty = _mm_mul_ps(fscal,dy01);
878 tz = _mm_mul_ps(fscal,dz01);
880 /* Update vectorial force */
881 fix0 = _mm_add_ps(fix0,tx);
882 fiy0 = _mm_add_ps(fiy0,ty);
883 fiz0 = _mm_add_ps(fiz0,tz);
885 fjx1 = _mm_add_ps(fjx1,tx);
886 fjy1 = _mm_add_ps(fjy1,ty);
887 fjz1 = _mm_add_ps(fjz1,tz);
889 /**************************
890 * CALCULATE INTERACTIONS *
891 **************************/
893 r02 = _mm_mul_ps(rsq02,rinv02);
894 r02 = _mm_andnot_ps(dummy_mask,r02);
896 /* Calculate table index by multiplying r with table scale and truncate to integer */
897 rt = _mm_mul_ps(r02,vftabscale);
898 vfitab = _mm_cvttps_epi32(rt);
899 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
900 vfitab = _mm_slli_epi32(vfitab,2);
902 /* CUBIC SPLINE TABLE ELECTROSTATICS */
903 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
904 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
905 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
906 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
907 _MM_TRANSPOSE4_PS(Y,F,G,H);
908 Heps = _mm_mul_ps(vfeps,H);
909 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
910 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
911 velec = _mm_mul_ps(qq02,VV);
912 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
913 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq02,FF),_mm_mul_ps(vftabscale,rinv02)));
915 /* Update potential sum for this i atom from the interaction with this j atom. */
916 velec = _mm_andnot_ps(dummy_mask,velec);
917 velecsum = _mm_add_ps(velecsum,velec);
921 fscal = _mm_andnot_ps(dummy_mask,fscal);
923 /* Calculate temporary vectorial force */
924 tx = _mm_mul_ps(fscal,dx02);
925 ty = _mm_mul_ps(fscal,dy02);
926 tz = _mm_mul_ps(fscal,dz02);
928 /* Update vectorial force */
929 fix0 = _mm_add_ps(fix0,tx);
930 fiy0 = _mm_add_ps(fiy0,ty);
931 fiz0 = _mm_add_ps(fiz0,tz);
933 fjx2 = _mm_add_ps(fjx2,tx);
934 fjy2 = _mm_add_ps(fjy2,ty);
935 fjz2 = _mm_add_ps(fjz2,tz);
937 /**************************
938 * CALCULATE INTERACTIONS *
939 **************************/
941 r10 = _mm_mul_ps(rsq10,rinv10);
942 r10 = _mm_andnot_ps(dummy_mask,r10);
944 /* Calculate table index by multiplying r with table scale and truncate to integer */
945 rt = _mm_mul_ps(r10,vftabscale);
946 vfitab = _mm_cvttps_epi32(rt);
947 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
948 vfitab = _mm_slli_epi32(vfitab,2);
950 /* CUBIC SPLINE TABLE ELECTROSTATICS */
951 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
952 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
953 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
954 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
955 _MM_TRANSPOSE4_PS(Y,F,G,H);
956 Heps = _mm_mul_ps(vfeps,H);
957 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
958 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
959 velec = _mm_mul_ps(qq10,VV);
960 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
961 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq10,FF),_mm_mul_ps(vftabscale,rinv10)));
963 /* Update potential sum for this i atom from the interaction with this j atom. */
964 velec = _mm_andnot_ps(dummy_mask,velec);
965 velecsum = _mm_add_ps(velecsum,velec);
969 fscal = _mm_andnot_ps(dummy_mask,fscal);
971 /* Calculate temporary vectorial force */
972 tx = _mm_mul_ps(fscal,dx10);
973 ty = _mm_mul_ps(fscal,dy10);
974 tz = _mm_mul_ps(fscal,dz10);
976 /* Update vectorial force */
977 fix1 = _mm_add_ps(fix1,tx);
978 fiy1 = _mm_add_ps(fiy1,ty);
979 fiz1 = _mm_add_ps(fiz1,tz);
981 fjx0 = _mm_add_ps(fjx0,tx);
982 fjy0 = _mm_add_ps(fjy0,ty);
983 fjz0 = _mm_add_ps(fjz0,tz);
985 /**************************
986 * CALCULATE INTERACTIONS *
987 **************************/
989 r11 = _mm_mul_ps(rsq11,rinv11);
990 r11 = _mm_andnot_ps(dummy_mask,r11);
992 /* Calculate table index by multiplying r with table scale and truncate to integer */
993 rt = _mm_mul_ps(r11,vftabscale);
994 vfitab = _mm_cvttps_epi32(rt);
995 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
996 vfitab = _mm_slli_epi32(vfitab,2);
998 /* CUBIC SPLINE TABLE ELECTROSTATICS */
999 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1000 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1001 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1002 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1003 _MM_TRANSPOSE4_PS(Y,F,G,H);
1004 Heps = _mm_mul_ps(vfeps,H);
1005 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1006 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
1007 velec = _mm_mul_ps(qq11,VV);
1008 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1009 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq11,FF),_mm_mul_ps(vftabscale,rinv11)));
1011 /* Update potential sum for this i atom from the interaction with this j atom. */
1012 velec = _mm_andnot_ps(dummy_mask,velec);
1013 velecsum = _mm_add_ps(velecsum,velec);
1017 fscal = _mm_andnot_ps(dummy_mask,fscal);
1019 /* Calculate temporary vectorial force */
1020 tx = _mm_mul_ps(fscal,dx11);
1021 ty = _mm_mul_ps(fscal,dy11);
1022 tz = _mm_mul_ps(fscal,dz11);
1024 /* Update vectorial force */
1025 fix1 = _mm_add_ps(fix1,tx);
1026 fiy1 = _mm_add_ps(fiy1,ty);
1027 fiz1 = _mm_add_ps(fiz1,tz);
1029 fjx1 = _mm_add_ps(fjx1,tx);
1030 fjy1 = _mm_add_ps(fjy1,ty);
1031 fjz1 = _mm_add_ps(fjz1,tz);
1033 /**************************
1034 * CALCULATE INTERACTIONS *
1035 **************************/
1037 r12 = _mm_mul_ps(rsq12,rinv12);
1038 r12 = _mm_andnot_ps(dummy_mask,r12);
1040 /* Calculate table index by multiplying r with table scale and truncate to integer */
1041 rt = _mm_mul_ps(r12,vftabscale);
1042 vfitab = _mm_cvttps_epi32(rt);
1043 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
1044 vfitab = _mm_slli_epi32(vfitab,2);
1046 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1047 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1048 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1049 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1050 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1051 _MM_TRANSPOSE4_PS(Y,F,G,H);
1052 Heps = _mm_mul_ps(vfeps,H);
1053 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1054 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
1055 velec = _mm_mul_ps(qq12,VV);
1056 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1057 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq12,FF),_mm_mul_ps(vftabscale,rinv12)));
1059 /* Update potential sum for this i atom from the interaction with this j atom. */
1060 velec = _mm_andnot_ps(dummy_mask,velec);
1061 velecsum = _mm_add_ps(velecsum,velec);
1065 fscal = _mm_andnot_ps(dummy_mask,fscal);
1067 /* Calculate temporary vectorial force */
1068 tx = _mm_mul_ps(fscal,dx12);
1069 ty = _mm_mul_ps(fscal,dy12);
1070 tz = _mm_mul_ps(fscal,dz12);
1072 /* Update vectorial force */
1073 fix1 = _mm_add_ps(fix1,tx);
1074 fiy1 = _mm_add_ps(fiy1,ty);
1075 fiz1 = _mm_add_ps(fiz1,tz);
1077 fjx2 = _mm_add_ps(fjx2,tx);
1078 fjy2 = _mm_add_ps(fjy2,ty);
1079 fjz2 = _mm_add_ps(fjz2,tz);
1081 /**************************
1082 * CALCULATE INTERACTIONS *
1083 **************************/
1085 r20 = _mm_mul_ps(rsq20,rinv20);
1086 r20 = _mm_andnot_ps(dummy_mask,r20);
1088 /* Calculate table index by multiplying r with table scale and truncate to integer */
1089 rt = _mm_mul_ps(r20,vftabscale);
1090 vfitab = _mm_cvttps_epi32(rt);
1091 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
1092 vfitab = _mm_slli_epi32(vfitab,2);
1094 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1095 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1096 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1097 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1098 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1099 _MM_TRANSPOSE4_PS(Y,F,G,H);
1100 Heps = _mm_mul_ps(vfeps,H);
1101 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1102 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
1103 velec = _mm_mul_ps(qq20,VV);
1104 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1105 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq20,FF),_mm_mul_ps(vftabscale,rinv20)));
1107 /* Update potential sum for this i atom from the interaction with this j atom. */
1108 velec = _mm_andnot_ps(dummy_mask,velec);
1109 velecsum = _mm_add_ps(velecsum,velec);
1113 fscal = _mm_andnot_ps(dummy_mask,fscal);
1115 /* Calculate temporary vectorial force */
1116 tx = _mm_mul_ps(fscal,dx20);
1117 ty = _mm_mul_ps(fscal,dy20);
1118 tz = _mm_mul_ps(fscal,dz20);
1120 /* Update vectorial force */
1121 fix2 = _mm_add_ps(fix2,tx);
1122 fiy2 = _mm_add_ps(fiy2,ty);
1123 fiz2 = _mm_add_ps(fiz2,tz);
1125 fjx0 = _mm_add_ps(fjx0,tx);
1126 fjy0 = _mm_add_ps(fjy0,ty);
1127 fjz0 = _mm_add_ps(fjz0,tz);
1129 /**************************
1130 * CALCULATE INTERACTIONS *
1131 **************************/
1133 r21 = _mm_mul_ps(rsq21,rinv21);
1134 r21 = _mm_andnot_ps(dummy_mask,r21);
1136 /* Calculate table index by multiplying r with table scale and truncate to integer */
1137 rt = _mm_mul_ps(r21,vftabscale);
1138 vfitab = _mm_cvttps_epi32(rt);
1139 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
1140 vfitab = _mm_slli_epi32(vfitab,2);
1142 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1143 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1144 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1145 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1146 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1147 _MM_TRANSPOSE4_PS(Y,F,G,H);
1148 Heps = _mm_mul_ps(vfeps,H);
1149 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1150 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
1151 velec = _mm_mul_ps(qq21,VV);
1152 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1153 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq21,FF),_mm_mul_ps(vftabscale,rinv21)));
1155 /* Update potential sum for this i atom from the interaction with this j atom. */
1156 velec = _mm_andnot_ps(dummy_mask,velec);
1157 velecsum = _mm_add_ps(velecsum,velec);
1161 fscal = _mm_andnot_ps(dummy_mask,fscal);
1163 /* Calculate temporary vectorial force */
1164 tx = _mm_mul_ps(fscal,dx21);
1165 ty = _mm_mul_ps(fscal,dy21);
1166 tz = _mm_mul_ps(fscal,dz21);
1168 /* Update vectorial force */
1169 fix2 = _mm_add_ps(fix2,tx);
1170 fiy2 = _mm_add_ps(fiy2,ty);
1171 fiz2 = _mm_add_ps(fiz2,tz);
1173 fjx1 = _mm_add_ps(fjx1,tx);
1174 fjy1 = _mm_add_ps(fjy1,ty);
1175 fjz1 = _mm_add_ps(fjz1,tz);
1177 /**************************
1178 * CALCULATE INTERACTIONS *
1179 **************************/
1181 r22 = _mm_mul_ps(rsq22,rinv22);
1182 r22 = _mm_andnot_ps(dummy_mask,r22);
1184 /* Calculate table index by multiplying r with table scale and truncate to integer */
1185 rt = _mm_mul_ps(r22,vftabscale);
1186 vfitab = _mm_cvttps_epi32(rt);
1187 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
1188 vfitab = _mm_slli_epi32(vfitab,2);
1190 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1191 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1192 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1193 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1194 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1195 _MM_TRANSPOSE4_PS(Y,F,G,H);
1196 Heps = _mm_mul_ps(vfeps,H);
1197 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1198 VV = _mm_add_ps(Y,_mm_mul_ps(vfeps,Fp));
1199 velec = _mm_mul_ps(qq22,VV);
1200 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1201 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq22,FF),_mm_mul_ps(vftabscale,rinv22)));
1203 /* Update potential sum for this i atom from the interaction with this j atom. */
1204 velec = _mm_andnot_ps(dummy_mask,velec);
1205 velecsum = _mm_add_ps(velecsum,velec);
1209 fscal = _mm_andnot_ps(dummy_mask,fscal);
1211 /* Calculate temporary vectorial force */
1212 tx = _mm_mul_ps(fscal,dx22);
1213 ty = _mm_mul_ps(fscal,dy22);
1214 tz = _mm_mul_ps(fscal,dz22);
1216 /* Update vectorial force */
1217 fix2 = _mm_add_ps(fix2,tx);
1218 fiy2 = _mm_add_ps(fiy2,ty);
1219 fiz2 = _mm_add_ps(fiz2,tz);
1221 fjx2 = _mm_add_ps(fjx2,tx);
1222 fjy2 = _mm_add_ps(fjy2,ty);
1223 fjz2 = _mm_add_ps(fjz2,tz);
1225 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
1226 f+j_coord_offsetC,f+j_coord_offsetD,
1227 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1229 /* Inner loop uses 409 flops */
1232 /* End of innermost loop */
1234 gmx_mm_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1235 f+i_coord_offset,fshift+i_shift_offset);
1238 /* Update potential energies */
1239 gmx_mm_update_1pot_ps(velecsum,kernel_data->energygrp_elec+ggid);
1240 gmx_mm_update_1pot_ps(vvdwsum,kernel_data->energygrp_vdw+ggid);
1242 /* Increment number of inner iterations */
1243 inneriter += j_index_end - j_index_start;
1245 /* Outer loop uses 29 flops */
1248 /* Increment number of outer iterations */
1251 /* Update outer/inner flops */
1253 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_VF,outeriter*29 + inneriter*409);
1256 * Gromacs nonbonded kernel: nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_F_sse2_single
1257 * Electrostatics interaction: CubicSplineTable
1258 * VdW interaction: LennardJones
1259 * Geometry: Water3-Water3
1260 * Calculate force/pot: Force
1263 nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_F_sse2_single
1264 (t_nblist * gmx_restrict nlist,
1265 rvec * gmx_restrict xx,
1266 rvec * gmx_restrict ff,
1267 t_forcerec * gmx_restrict fr,
1268 t_mdatoms * gmx_restrict mdatoms,
1269 nb_kernel_data_t * gmx_restrict kernel_data,
1270 t_nrnb * gmx_restrict nrnb)
1272 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
1273 * just 0 for non-waters.
1274 * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
1275 * jnr indices corresponding to data put in the four positions in the SIMD register.
1277 int i_shift_offset,i_coord_offset,outeriter,inneriter;
1278 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1279 int jnrA,jnrB,jnrC,jnrD;
1280 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
1281 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
1282 real shX,shY,shZ,rcutoff_scalar;
1283 real *shiftvec,*fshift,*x,*f;
1284 __m128 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
1286 __m128 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
1288 __m128 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1290 __m128 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1291 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
1292 __m128 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
1293 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
1294 __m128 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1295 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
1296 __m128 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1297 __m128 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
1298 __m128 dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
1299 __m128 dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
1300 __m128 dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
1301 __m128 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1302 __m128 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1303 __m128 dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
1304 __m128 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1305 __m128 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1306 __m128 velec,felec,velecsum,facel,crf,krf,krf2;
1309 __m128 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
1312 __m128 one_sixth = _mm_set1_ps(1.0/6.0);
1313 __m128 one_twelfth = _mm_set1_ps(1.0/12.0);
1315 __m128i ifour = _mm_set1_epi32(4);
1316 __m128 rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
1318 __m128 dummy_mask,cutoff_mask;
1319 __m128 signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
1320 __m128 one = _mm_set1_ps(1.0);
1321 __m128 two = _mm_set1_ps(2.0);
1327 jindex = nlist->jindex;
1329 shiftidx = nlist->shift;
1331 shiftvec = fr->shift_vec[0];
1332 fshift = fr->fshift[0];
1333 facel = _mm_set1_ps(fr->epsfac);
1334 charge = mdatoms->chargeA;
1335 nvdwtype = fr->ntype;
1336 vdwparam = fr->nbfp;
1337 vdwtype = mdatoms->typeA;
1339 vftab = kernel_data->table_elec->data;
1340 vftabscale = _mm_set1_ps(kernel_data->table_elec->scale);
1342 /* Setup water-specific parameters */
1343 inr = nlist->iinr[0];
1344 iq0 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+0]));
1345 iq1 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
1346 iq2 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
1347 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
1349 jq0 = _mm_set1_ps(charge[inr+0]);
1350 jq1 = _mm_set1_ps(charge[inr+1]);
1351 jq2 = _mm_set1_ps(charge[inr+2]);
1352 vdwjidx0A = 2*vdwtype[inr+0];
1353 qq00 = _mm_mul_ps(iq0,jq0);
1354 c6_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A]);
1355 c12_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A+1]);
1356 qq01 = _mm_mul_ps(iq0,jq1);
1357 qq02 = _mm_mul_ps(iq0,jq2);
1358 qq10 = _mm_mul_ps(iq1,jq0);
1359 qq11 = _mm_mul_ps(iq1,jq1);
1360 qq12 = _mm_mul_ps(iq1,jq2);
1361 qq20 = _mm_mul_ps(iq2,jq0);
1362 qq21 = _mm_mul_ps(iq2,jq1);
1363 qq22 = _mm_mul_ps(iq2,jq2);
1365 /* Avoid stupid compiler warnings */
1366 jnrA = jnrB = jnrC = jnrD = 0;
1367 j_coord_offsetA = 0;
1368 j_coord_offsetB = 0;
1369 j_coord_offsetC = 0;
1370 j_coord_offsetD = 0;
1375 /* Start outer loop over neighborlists */
1376 for(iidx=0; iidx<nri; iidx++)
1378 /* Load shift vector for this list */
1379 i_shift_offset = DIM*shiftidx[iidx];
1380 shX = shiftvec[i_shift_offset+XX];
1381 shY = shiftvec[i_shift_offset+YY];
1382 shZ = shiftvec[i_shift_offset+ZZ];
1384 /* Load limits for loop over neighbors */
1385 j_index_start = jindex[iidx];
1386 j_index_end = jindex[iidx+1];
1388 /* Get outer coordinate index */
1390 i_coord_offset = DIM*inr;
1392 /* Load i particle coords and add shift vector */
1393 ix0 = _mm_set1_ps(shX + x[i_coord_offset+DIM*0+XX]);
1394 iy0 = _mm_set1_ps(shY + x[i_coord_offset+DIM*0+YY]);
1395 iz0 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*0+ZZ]);
1396 ix1 = _mm_set1_ps(shX + x[i_coord_offset+DIM*1+XX]);
1397 iy1 = _mm_set1_ps(shY + x[i_coord_offset+DIM*1+YY]);
1398 iz1 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*1+ZZ]);
1399 ix2 = _mm_set1_ps(shX + x[i_coord_offset+DIM*2+XX]);
1400 iy2 = _mm_set1_ps(shY + x[i_coord_offset+DIM*2+YY]);
1401 iz2 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*2+ZZ]);
1403 fix0 = _mm_setzero_ps();
1404 fiy0 = _mm_setzero_ps();
1405 fiz0 = _mm_setzero_ps();
1406 fix1 = _mm_setzero_ps();
1407 fiy1 = _mm_setzero_ps();
1408 fiz1 = _mm_setzero_ps();
1409 fix2 = _mm_setzero_ps();
1410 fiy2 = _mm_setzero_ps();
1411 fiz2 = _mm_setzero_ps();
1413 /* Start inner kernel loop */
1414 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
1417 /* Get j neighbor index, and coordinate index */
1419 jnrB = jjnr[jidx+1];
1420 jnrC = jjnr[jidx+2];
1421 jnrD = jjnr[jidx+3];
1423 j_coord_offsetA = DIM*jnrA;
1424 j_coord_offsetB = DIM*jnrB;
1425 j_coord_offsetC = DIM*jnrC;
1426 j_coord_offsetD = DIM*jnrD;
1428 /* load j atom coordinates */
1429 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1430 x+j_coord_offsetC,x+j_coord_offsetD,
1431 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1433 /* Calculate displacement vector */
1434 dx00 = _mm_sub_ps(ix0,jx0);
1435 dy00 = _mm_sub_ps(iy0,jy0);
1436 dz00 = _mm_sub_ps(iz0,jz0);
1437 dx01 = _mm_sub_ps(ix0,jx1);
1438 dy01 = _mm_sub_ps(iy0,jy1);
1439 dz01 = _mm_sub_ps(iz0,jz1);
1440 dx02 = _mm_sub_ps(ix0,jx2);
1441 dy02 = _mm_sub_ps(iy0,jy2);
1442 dz02 = _mm_sub_ps(iz0,jz2);
1443 dx10 = _mm_sub_ps(ix1,jx0);
1444 dy10 = _mm_sub_ps(iy1,jy0);
1445 dz10 = _mm_sub_ps(iz1,jz0);
1446 dx11 = _mm_sub_ps(ix1,jx1);
1447 dy11 = _mm_sub_ps(iy1,jy1);
1448 dz11 = _mm_sub_ps(iz1,jz1);
1449 dx12 = _mm_sub_ps(ix1,jx2);
1450 dy12 = _mm_sub_ps(iy1,jy2);
1451 dz12 = _mm_sub_ps(iz1,jz2);
1452 dx20 = _mm_sub_ps(ix2,jx0);
1453 dy20 = _mm_sub_ps(iy2,jy0);
1454 dz20 = _mm_sub_ps(iz2,jz0);
1455 dx21 = _mm_sub_ps(ix2,jx1);
1456 dy21 = _mm_sub_ps(iy2,jy1);
1457 dz21 = _mm_sub_ps(iz2,jz1);
1458 dx22 = _mm_sub_ps(ix2,jx2);
1459 dy22 = _mm_sub_ps(iy2,jy2);
1460 dz22 = _mm_sub_ps(iz2,jz2);
1462 /* Calculate squared distance and things based on it */
1463 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
1464 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
1465 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
1466 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
1467 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1468 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1469 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
1470 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1471 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1473 rinv00 = gmx_mm_invsqrt_ps(rsq00);
1474 rinv01 = gmx_mm_invsqrt_ps(rsq01);
1475 rinv02 = gmx_mm_invsqrt_ps(rsq02);
1476 rinv10 = gmx_mm_invsqrt_ps(rsq10);
1477 rinv11 = gmx_mm_invsqrt_ps(rsq11);
1478 rinv12 = gmx_mm_invsqrt_ps(rsq12);
1479 rinv20 = gmx_mm_invsqrt_ps(rsq20);
1480 rinv21 = gmx_mm_invsqrt_ps(rsq21);
1481 rinv22 = gmx_mm_invsqrt_ps(rsq22);
1483 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
1485 fjx0 = _mm_setzero_ps();
1486 fjy0 = _mm_setzero_ps();
1487 fjz0 = _mm_setzero_ps();
1488 fjx1 = _mm_setzero_ps();
1489 fjy1 = _mm_setzero_ps();
1490 fjz1 = _mm_setzero_ps();
1491 fjx2 = _mm_setzero_ps();
1492 fjy2 = _mm_setzero_ps();
1493 fjz2 = _mm_setzero_ps();
1495 /**************************
1496 * CALCULATE INTERACTIONS *
1497 **************************/
1499 r00 = _mm_mul_ps(rsq00,rinv00);
1501 /* Calculate table index by multiplying r with table scale and truncate to integer */
1502 rt = _mm_mul_ps(r00,vftabscale);
1503 vfitab = _mm_cvttps_epi32(rt);
1504 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
1505 vfitab = _mm_slli_epi32(vfitab,2);
1507 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1508 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1509 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1510 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1511 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1512 _MM_TRANSPOSE4_PS(Y,F,G,H);
1513 Heps = _mm_mul_ps(vfeps,H);
1514 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1515 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1516 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq00,FF),_mm_mul_ps(vftabscale,rinv00)));
1518 /* LENNARD-JONES DISPERSION/REPULSION */
1520 rinvsix = _mm_mul_ps(_mm_mul_ps(rinvsq00,rinvsq00),rinvsq00);
1521 fvdw = _mm_mul_ps(_mm_sub_ps(_mm_mul_ps(c12_00,rinvsix),c6_00),_mm_mul_ps(rinvsix,rinvsq00));
1523 fscal = _mm_add_ps(felec,fvdw);
1525 /* Calculate temporary vectorial force */
1526 tx = _mm_mul_ps(fscal,dx00);
1527 ty = _mm_mul_ps(fscal,dy00);
1528 tz = _mm_mul_ps(fscal,dz00);
1530 /* Update vectorial force */
1531 fix0 = _mm_add_ps(fix0,tx);
1532 fiy0 = _mm_add_ps(fiy0,ty);
1533 fiz0 = _mm_add_ps(fiz0,tz);
1535 fjx0 = _mm_add_ps(fjx0,tx);
1536 fjy0 = _mm_add_ps(fjy0,ty);
1537 fjz0 = _mm_add_ps(fjz0,tz);
1539 /**************************
1540 * CALCULATE INTERACTIONS *
1541 **************************/
1543 r01 = _mm_mul_ps(rsq01,rinv01);
1545 /* Calculate table index by multiplying r with table scale and truncate to integer */
1546 rt = _mm_mul_ps(r01,vftabscale);
1547 vfitab = _mm_cvttps_epi32(rt);
1548 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
1549 vfitab = _mm_slli_epi32(vfitab,2);
1551 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1552 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1553 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1554 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1555 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1556 _MM_TRANSPOSE4_PS(Y,F,G,H);
1557 Heps = _mm_mul_ps(vfeps,H);
1558 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1559 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1560 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq01,FF),_mm_mul_ps(vftabscale,rinv01)));
1564 /* Calculate temporary vectorial force */
1565 tx = _mm_mul_ps(fscal,dx01);
1566 ty = _mm_mul_ps(fscal,dy01);
1567 tz = _mm_mul_ps(fscal,dz01);
1569 /* Update vectorial force */
1570 fix0 = _mm_add_ps(fix0,tx);
1571 fiy0 = _mm_add_ps(fiy0,ty);
1572 fiz0 = _mm_add_ps(fiz0,tz);
1574 fjx1 = _mm_add_ps(fjx1,tx);
1575 fjy1 = _mm_add_ps(fjy1,ty);
1576 fjz1 = _mm_add_ps(fjz1,tz);
1578 /**************************
1579 * CALCULATE INTERACTIONS *
1580 **************************/
1582 r02 = _mm_mul_ps(rsq02,rinv02);
1584 /* Calculate table index by multiplying r with table scale and truncate to integer */
1585 rt = _mm_mul_ps(r02,vftabscale);
1586 vfitab = _mm_cvttps_epi32(rt);
1587 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
1588 vfitab = _mm_slli_epi32(vfitab,2);
1590 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1591 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1592 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1593 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1594 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1595 _MM_TRANSPOSE4_PS(Y,F,G,H);
1596 Heps = _mm_mul_ps(vfeps,H);
1597 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1598 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1599 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq02,FF),_mm_mul_ps(vftabscale,rinv02)));
1603 /* Calculate temporary vectorial force */
1604 tx = _mm_mul_ps(fscal,dx02);
1605 ty = _mm_mul_ps(fscal,dy02);
1606 tz = _mm_mul_ps(fscal,dz02);
1608 /* Update vectorial force */
1609 fix0 = _mm_add_ps(fix0,tx);
1610 fiy0 = _mm_add_ps(fiy0,ty);
1611 fiz0 = _mm_add_ps(fiz0,tz);
1613 fjx2 = _mm_add_ps(fjx2,tx);
1614 fjy2 = _mm_add_ps(fjy2,ty);
1615 fjz2 = _mm_add_ps(fjz2,tz);
1617 /**************************
1618 * CALCULATE INTERACTIONS *
1619 **************************/
1621 r10 = _mm_mul_ps(rsq10,rinv10);
1623 /* Calculate table index by multiplying r with table scale and truncate to integer */
1624 rt = _mm_mul_ps(r10,vftabscale);
1625 vfitab = _mm_cvttps_epi32(rt);
1626 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
1627 vfitab = _mm_slli_epi32(vfitab,2);
1629 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1630 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1631 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1632 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1633 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1634 _MM_TRANSPOSE4_PS(Y,F,G,H);
1635 Heps = _mm_mul_ps(vfeps,H);
1636 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1637 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1638 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq10,FF),_mm_mul_ps(vftabscale,rinv10)));
1642 /* Calculate temporary vectorial force */
1643 tx = _mm_mul_ps(fscal,dx10);
1644 ty = _mm_mul_ps(fscal,dy10);
1645 tz = _mm_mul_ps(fscal,dz10);
1647 /* Update vectorial force */
1648 fix1 = _mm_add_ps(fix1,tx);
1649 fiy1 = _mm_add_ps(fiy1,ty);
1650 fiz1 = _mm_add_ps(fiz1,tz);
1652 fjx0 = _mm_add_ps(fjx0,tx);
1653 fjy0 = _mm_add_ps(fjy0,ty);
1654 fjz0 = _mm_add_ps(fjz0,tz);
1656 /**************************
1657 * CALCULATE INTERACTIONS *
1658 **************************/
1660 r11 = _mm_mul_ps(rsq11,rinv11);
1662 /* Calculate table index by multiplying r with table scale and truncate to integer */
1663 rt = _mm_mul_ps(r11,vftabscale);
1664 vfitab = _mm_cvttps_epi32(rt);
1665 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
1666 vfitab = _mm_slli_epi32(vfitab,2);
1668 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1669 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1670 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1671 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1672 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1673 _MM_TRANSPOSE4_PS(Y,F,G,H);
1674 Heps = _mm_mul_ps(vfeps,H);
1675 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1676 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1677 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq11,FF),_mm_mul_ps(vftabscale,rinv11)));
1681 /* Calculate temporary vectorial force */
1682 tx = _mm_mul_ps(fscal,dx11);
1683 ty = _mm_mul_ps(fscal,dy11);
1684 tz = _mm_mul_ps(fscal,dz11);
1686 /* Update vectorial force */
1687 fix1 = _mm_add_ps(fix1,tx);
1688 fiy1 = _mm_add_ps(fiy1,ty);
1689 fiz1 = _mm_add_ps(fiz1,tz);
1691 fjx1 = _mm_add_ps(fjx1,tx);
1692 fjy1 = _mm_add_ps(fjy1,ty);
1693 fjz1 = _mm_add_ps(fjz1,tz);
1695 /**************************
1696 * CALCULATE INTERACTIONS *
1697 **************************/
1699 r12 = _mm_mul_ps(rsq12,rinv12);
1701 /* Calculate table index by multiplying r with table scale and truncate to integer */
1702 rt = _mm_mul_ps(r12,vftabscale);
1703 vfitab = _mm_cvttps_epi32(rt);
1704 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
1705 vfitab = _mm_slli_epi32(vfitab,2);
1707 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1708 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1709 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1710 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1711 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1712 _MM_TRANSPOSE4_PS(Y,F,G,H);
1713 Heps = _mm_mul_ps(vfeps,H);
1714 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1715 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1716 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq12,FF),_mm_mul_ps(vftabscale,rinv12)));
1720 /* Calculate temporary vectorial force */
1721 tx = _mm_mul_ps(fscal,dx12);
1722 ty = _mm_mul_ps(fscal,dy12);
1723 tz = _mm_mul_ps(fscal,dz12);
1725 /* Update vectorial force */
1726 fix1 = _mm_add_ps(fix1,tx);
1727 fiy1 = _mm_add_ps(fiy1,ty);
1728 fiz1 = _mm_add_ps(fiz1,tz);
1730 fjx2 = _mm_add_ps(fjx2,tx);
1731 fjy2 = _mm_add_ps(fjy2,ty);
1732 fjz2 = _mm_add_ps(fjz2,tz);
1734 /**************************
1735 * CALCULATE INTERACTIONS *
1736 **************************/
1738 r20 = _mm_mul_ps(rsq20,rinv20);
1740 /* Calculate table index by multiplying r with table scale and truncate to integer */
1741 rt = _mm_mul_ps(r20,vftabscale);
1742 vfitab = _mm_cvttps_epi32(rt);
1743 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
1744 vfitab = _mm_slli_epi32(vfitab,2);
1746 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1747 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1748 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1749 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1750 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1751 _MM_TRANSPOSE4_PS(Y,F,G,H);
1752 Heps = _mm_mul_ps(vfeps,H);
1753 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1754 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1755 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq20,FF),_mm_mul_ps(vftabscale,rinv20)));
1759 /* Calculate temporary vectorial force */
1760 tx = _mm_mul_ps(fscal,dx20);
1761 ty = _mm_mul_ps(fscal,dy20);
1762 tz = _mm_mul_ps(fscal,dz20);
1764 /* Update vectorial force */
1765 fix2 = _mm_add_ps(fix2,tx);
1766 fiy2 = _mm_add_ps(fiy2,ty);
1767 fiz2 = _mm_add_ps(fiz2,tz);
1769 fjx0 = _mm_add_ps(fjx0,tx);
1770 fjy0 = _mm_add_ps(fjy0,ty);
1771 fjz0 = _mm_add_ps(fjz0,tz);
1773 /**************************
1774 * CALCULATE INTERACTIONS *
1775 **************************/
1777 r21 = _mm_mul_ps(rsq21,rinv21);
1779 /* Calculate table index by multiplying r with table scale and truncate to integer */
1780 rt = _mm_mul_ps(r21,vftabscale);
1781 vfitab = _mm_cvttps_epi32(rt);
1782 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
1783 vfitab = _mm_slli_epi32(vfitab,2);
1785 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1786 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1787 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1788 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1789 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1790 _MM_TRANSPOSE4_PS(Y,F,G,H);
1791 Heps = _mm_mul_ps(vfeps,H);
1792 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1793 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1794 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq21,FF),_mm_mul_ps(vftabscale,rinv21)));
1798 /* Calculate temporary vectorial force */
1799 tx = _mm_mul_ps(fscal,dx21);
1800 ty = _mm_mul_ps(fscal,dy21);
1801 tz = _mm_mul_ps(fscal,dz21);
1803 /* Update vectorial force */
1804 fix2 = _mm_add_ps(fix2,tx);
1805 fiy2 = _mm_add_ps(fiy2,ty);
1806 fiz2 = _mm_add_ps(fiz2,tz);
1808 fjx1 = _mm_add_ps(fjx1,tx);
1809 fjy1 = _mm_add_ps(fjy1,ty);
1810 fjz1 = _mm_add_ps(fjz1,tz);
1812 /**************************
1813 * CALCULATE INTERACTIONS *
1814 **************************/
1816 r22 = _mm_mul_ps(rsq22,rinv22);
1818 /* Calculate table index by multiplying r with table scale and truncate to integer */
1819 rt = _mm_mul_ps(r22,vftabscale);
1820 vfitab = _mm_cvttps_epi32(rt);
1821 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
1822 vfitab = _mm_slli_epi32(vfitab,2);
1824 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1825 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1826 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1827 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1828 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1829 _MM_TRANSPOSE4_PS(Y,F,G,H);
1830 Heps = _mm_mul_ps(vfeps,H);
1831 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1832 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1833 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq22,FF),_mm_mul_ps(vftabscale,rinv22)));
1837 /* Calculate temporary vectorial force */
1838 tx = _mm_mul_ps(fscal,dx22);
1839 ty = _mm_mul_ps(fscal,dy22);
1840 tz = _mm_mul_ps(fscal,dz22);
1842 /* Update vectorial force */
1843 fix2 = _mm_add_ps(fix2,tx);
1844 fiy2 = _mm_add_ps(fiy2,ty);
1845 fiz2 = _mm_add_ps(fiz2,tz);
1847 fjx2 = _mm_add_ps(fjx2,tx);
1848 fjy2 = _mm_add_ps(fjy2,ty);
1849 fjz2 = _mm_add_ps(fjz2,tz);
1851 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
1852 f+j_coord_offsetC,f+j_coord_offsetD,
1853 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1855 /* Inner loop uses 359 flops */
1858 if(jidx<j_index_end)
1861 /* Get j neighbor index, and coordinate index */
1863 jnrB = jjnr[jidx+1];
1864 jnrC = jjnr[jidx+2];
1865 jnrD = jjnr[jidx+3];
1867 /* Sign of each element will be negative for non-real atoms.
1868 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
1869 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
1871 dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
1872 jnrA = (jnrA>=0) ? jnrA : 0;
1873 jnrB = (jnrB>=0) ? jnrB : 0;
1874 jnrC = (jnrC>=0) ? jnrC : 0;
1875 jnrD = (jnrD>=0) ? jnrD : 0;
1877 j_coord_offsetA = DIM*jnrA;
1878 j_coord_offsetB = DIM*jnrB;
1879 j_coord_offsetC = DIM*jnrC;
1880 j_coord_offsetD = DIM*jnrD;
1882 /* load j atom coordinates */
1883 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1884 x+j_coord_offsetC,x+j_coord_offsetD,
1885 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1887 /* Calculate displacement vector */
1888 dx00 = _mm_sub_ps(ix0,jx0);
1889 dy00 = _mm_sub_ps(iy0,jy0);
1890 dz00 = _mm_sub_ps(iz0,jz0);
1891 dx01 = _mm_sub_ps(ix0,jx1);
1892 dy01 = _mm_sub_ps(iy0,jy1);
1893 dz01 = _mm_sub_ps(iz0,jz1);
1894 dx02 = _mm_sub_ps(ix0,jx2);
1895 dy02 = _mm_sub_ps(iy0,jy2);
1896 dz02 = _mm_sub_ps(iz0,jz2);
1897 dx10 = _mm_sub_ps(ix1,jx0);
1898 dy10 = _mm_sub_ps(iy1,jy0);
1899 dz10 = _mm_sub_ps(iz1,jz0);
1900 dx11 = _mm_sub_ps(ix1,jx1);
1901 dy11 = _mm_sub_ps(iy1,jy1);
1902 dz11 = _mm_sub_ps(iz1,jz1);
1903 dx12 = _mm_sub_ps(ix1,jx2);
1904 dy12 = _mm_sub_ps(iy1,jy2);
1905 dz12 = _mm_sub_ps(iz1,jz2);
1906 dx20 = _mm_sub_ps(ix2,jx0);
1907 dy20 = _mm_sub_ps(iy2,jy0);
1908 dz20 = _mm_sub_ps(iz2,jz0);
1909 dx21 = _mm_sub_ps(ix2,jx1);
1910 dy21 = _mm_sub_ps(iy2,jy1);
1911 dz21 = _mm_sub_ps(iz2,jz1);
1912 dx22 = _mm_sub_ps(ix2,jx2);
1913 dy22 = _mm_sub_ps(iy2,jy2);
1914 dz22 = _mm_sub_ps(iz2,jz2);
1916 /* Calculate squared distance and things based on it */
1917 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
1918 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
1919 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
1920 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
1921 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1922 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1923 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
1924 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1925 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1927 rinv00 = gmx_mm_invsqrt_ps(rsq00);
1928 rinv01 = gmx_mm_invsqrt_ps(rsq01);
1929 rinv02 = gmx_mm_invsqrt_ps(rsq02);
1930 rinv10 = gmx_mm_invsqrt_ps(rsq10);
1931 rinv11 = gmx_mm_invsqrt_ps(rsq11);
1932 rinv12 = gmx_mm_invsqrt_ps(rsq12);
1933 rinv20 = gmx_mm_invsqrt_ps(rsq20);
1934 rinv21 = gmx_mm_invsqrt_ps(rsq21);
1935 rinv22 = gmx_mm_invsqrt_ps(rsq22);
1937 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
1939 fjx0 = _mm_setzero_ps();
1940 fjy0 = _mm_setzero_ps();
1941 fjz0 = _mm_setzero_ps();
1942 fjx1 = _mm_setzero_ps();
1943 fjy1 = _mm_setzero_ps();
1944 fjz1 = _mm_setzero_ps();
1945 fjx2 = _mm_setzero_ps();
1946 fjy2 = _mm_setzero_ps();
1947 fjz2 = _mm_setzero_ps();
1949 /**************************
1950 * CALCULATE INTERACTIONS *
1951 **************************/
1953 r00 = _mm_mul_ps(rsq00,rinv00);
1954 r00 = _mm_andnot_ps(dummy_mask,r00);
1956 /* Calculate table index by multiplying r with table scale and truncate to integer */
1957 rt = _mm_mul_ps(r00,vftabscale);
1958 vfitab = _mm_cvttps_epi32(rt);
1959 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
1960 vfitab = _mm_slli_epi32(vfitab,2);
1962 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1963 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
1964 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
1965 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
1966 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
1967 _MM_TRANSPOSE4_PS(Y,F,G,H);
1968 Heps = _mm_mul_ps(vfeps,H);
1969 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
1970 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
1971 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq00,FF),_mm_mul_ps(vftabscale,rinv00)));
1973 /* LENNARD-JONES DISPERSION/REPULSION */
1975 rinvsix = _mm_mul_ps(_mm_mul_ps(rinvsq00,rinvsq00),rinvsq00);
1976 fvdw = _mm_mul_ps(_mm_sub_ps(_mm_mul_ps(c12_00,rinvsix),c6_00),_mm_mul_ps(rinvsix,rinvsq00));
1978 fscal = _mm_add_ps(felec,fvdw);
1980 fscal = _mm_andnot_ps(dummy_mask,fscal);
1982 /* Calculate temporary vectorial force */
1983 tx = _mm_mul_ps(fscal,dx00);
1984 ty = _mm_mul_ps(fscal,dy00);
1985 tz = _mm_mul_ps(fscal,dz00);
1987 /* Update vectorial force */
1988 fix0 = _mm_add_ps(fix0,tx);
1989 fiy0 = _mm_add_ps(fiy0,ty);
1990 fiz0 = _mm_add_ps(fiz0,tz);
1992 fjx0 = _mm_add_ps(fjx0,tx);
1993 fjy0 = _mm_add_ps(fjy0,ty);
1994 fjz0 = _mm_add_ps(fjz0,tz);
1996 /**************************
1997 * CALCULATE INTERACTIONS *
1998 **************************/
2000 r01 = _mm_mul_ps(rsq01,rinv01);
2001 r01 = _mm_andnot_ps(dummy_mask,r01);
2003 /* Calculate table index by multiplying r with table scale and truncate to integer */
2004 rt = _mm_mul_ps(r01,vftabscale);
2005 vfitab = _mm_cvttps_epi32(rt);
2006 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
2007 vfitab = _mm_slli_epi32(vfitab,2);
2009 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2010 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
2011 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
2012 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
2013 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
2014 _MM_TRANSPOSE4_PS(Y,F,G,H);
2015 Heps = _mm_mul_ps(vfeps,H);
2016 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
2017 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
2018 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq01,FF),_mm_mul_ps(vftabscale,rinv01)));
2022 fscal = _mm_andnot_ps(dummy_mask,fscal);
2024 /* Calculate temporary vectorial force */
2025 tx = _mm_mul_ps(fscal,dx01);
2026 ty = _mm_mul_ps(fscal,dy01);
2027 tz = _mm_mul_ps(fscal,dz01);
2029 /* Update vectorial force */
2030 fix0 = _mm_add_ps(fix0,tx);
2031 fiy0 = _mm_add_ps(fiy0,ty);
2032 fiz0 = _mm_add_ps(fiz0,tz);
2034 fjx1 = _mm_add_ps(fjx1,tx);
2035 fjy1 = _mm_add_ps(fjy1,ty);
2036 fjz1 = _mm_add_ps(fjz1,tz);
2038 /**************************
2039 * CALCULATE INTERACTIONS *
2040 **************************/
2042 r02 = _mm_mul_ps(rsq02,rinv02);
2043 r02 = _mm_andnot_ps(dummy_mask,r02);
2045 /* Calculate table index by multiplying r with table scale and truncate to integer */
2046 rt = _mm_mul_ps(r02,vftabscale);
2047 vfitab = _mm_cvttps_epi32(rt);
2048 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
2049 vfitab = _mm_slli_epi32(vfitab,2);
2051 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2052 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
2053 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
2054 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
2055 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
2056 _MM_TRANSPOSE4_PS(Y,F,G,H);
2057 Heps = _mm_mul_ps(vfeps,H);
2058 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
2059 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
2060 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq02,FF),_mm_mul_ps(vftabscale,rinv02)));
2064 fscal = _mm_andnot_ps(dummy_mask,fscal);
2066 /* Calculate temporary vectorial force */
2067 tx = _mm_mul_ps(fscal,dx02);
2068 ty = _mm_mul_ps(fscal,dy02);
2069 tz = _mm_mul_ps(fscal,dz02);
2071 /* Update vectorial force */
2072 fix0 = _mm_add_ps(fix0,tx);
2073 fiy0 = _mm_add_ps(fiy0,ty);
2074 fiz0 = _mm_add_ps(fiz0,tz);
2076 fjx2 = _mm_add_ps(fjx2,tx);
2077 fjy2 = _mm_add_ps(fjy2,ty);
2078 fjz2 = _mm_add_ps(fjz2,tz);
2080 /**************************
2081 * CALCULATE INTERACTIONS *
2082 **************************/
2084 r10 = _mm_mul_ps(rsq10,rinv10);
2085 r10 = _mm_andnot_ps(dummy_mask,r10);
2087 /* Calculate table index by multiplying r with table scale and truncate to integer */
2088 rt = _mm_mul_ps(r10,vftabscale);
2089 vfitab = _mm_cvttps_epi32(rt);
2090 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
2091 vfitab = _mm_slli_epi32(vfitab,2);
2093 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2094 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
2095 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
2096 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
2097 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
2098 _MM_TRANSPOSE4_PS(Y,F,G,H);
2099 Heps = _mm_mul_ps(vfeps,H);
2100 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
2101 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
2102 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq10,FF),_mm_mul_ps(vftabscale,rinv10)));
2106 fscal = _mm_andnot_ps(dummy_mask,fscal);
2108 /* Calculate temporary vectorial force */
2109 tx = _mm_mul_ps(fscal,dx10);
2110 ty = _mm_mul_ps(fscal,dy10);
2111 tz = _mm_mul_ps(fscal,dz10);
2113 /* Update vectorial force */
2114 fix1 = _mm_add_ps(fix1,tx);
2115 fiy1 = _mm_add_ps(fiy1,ty);
2116 fiz1 = _mm_add_ps(fiz1,tz);
2118 fjx0 = _mm_add_ps(fjx0,tx);
2119 fjy0 = _mm_add_ps(fjy0,ty);
2120 fjz0 = _mm_add_ps(fjz0,tz);
2122 /**************************
2123 * CALCULATE INTERACTIONS *
2124 **************************/
2126 r11 = _mm_mul_ps(rsq11,rinv11);
2127 r11 = _mm_andnot_ps(dummy_mask,r11);
2129 /* Calculate table index by multiplying r with table scale and truncate to integer */
2130 rt = _mm_mul_ps(r11,vftabscale);
2131 vfitab = _mm_cvttps_epi32(rt);
2132 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
2133 vfitab = _mm_slli_epi32(vfitab,2);
2135 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2136 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
2137 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
2138 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
2139 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
2140 _MM_TRANSPOSE4_PS(Y,F,G,H);
2141 Heps = _mm_mul_ps(vfeps,H);
2142 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
2143 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
2144 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq11,FF),_mm_mul_ps(vftabscale,rinv11)));
2148 fscal = _mm_andnot_ps(dummy_mask,fscal);
2150 /* Calculate temporary vectorial force */
2151 tx = _mm_mul_ps(fscal,dx11);
2152 ty = _mm_mul_ps(fscal,dy11);
2153 tz = _mm_mul_ps(fscal,dz11);
2155 /* Update vectorial force */
2156 fix1 = _mm_add_ps(fix1,tx);
2157 fiy1 = _mm_add_ps(fiy1,ty);
2158 fiz1 = _mm_add_ps(fiz1,tz);
2160 fjx1 = _mm_add_ps(fjx1,tx);
2161 fjy1 = _mm_add_ps(fjy1,ty);
2162 fjz1 = _mm_add_ps(fjz1,tz);
2164 /**************************
2165 * CALCULATE INTERACTIONS *
2166 **************************/
2168 r12 = _mm_mul_ps(rsq12,rinv12);
2169 r12 = _mm_andnot_ps(dummy_mask,r12);
2171 /* Calculate table index by multiplying r with table scale and truncate to integer */
2172 rt = _mm_mul_ps(r12,vftabscale);
2173 vfitab = _mm_cvttps_epi32(rt);
2174 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
2175 vfitab = _mm_slli_epi32(vfitab,2);
2177 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2178 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
2179 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
2180 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
2181 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
2182 _MM_TRANSPOSE4_PS(Y,F,G,H);
2183 Heps = _mm_mul_ps(vfeps,H);
2184 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
2185 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
2186 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq12,FF),_mm_mul_ps(vftabscale,rinv12)));
2190 fscal = _mm_andnot_ps(dummy_mask,fscal);
2192 /* Calculate temporary vectorial force */
2193 tx = _mm_mul_ps(fscal,dx12);
2194 ty = _mm_mul_ps(fscal,dy12);
2195 tz = _mm_mul_ps(fscal,dz12);
2197 /* Update vectorial force */
2198 fix1 = _mm_add_ps(fix1,tx);
2199 fiy1 = _mm_add_ps(fiy1,ty);
2200 fiz1 = _mm_add_ps(fiz1,tz);
2202 fjx2 = _mm_add_ps(fjx2,tx);
2203 fjy2 = _mm_add_ps(fjy2,ty);
2204 fjz2 = _mm_add_ps(fjz2,tz);
2206 /**************************
2207 * CALCULATE INTERACTIONS *
2208 **************************/
2210 r20 = _mm_mul_ps(rsq20,rinv20);
2211 r20 = _mm_andnot_ps(dummy_mask,r20);
2213 /* Calculate table index by multiplying r with table scale and truncate to integer */
2214 rt = _mm_mul_ps(r20,vftabscale);
2215 vfitab = _mm_cvttps_epi32(rt);
2216 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
2217 vfitab = _mm_slli_epi32(vfitab,2);
2219 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2220 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
2221 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
2222 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
2223 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
2224 _MM_TRANSPOSE4_PS(Y,F,G,H);
2225 Heps = _mm_mul_ps(vfeps,H);
2226 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
2227 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
2228 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq20,FF),_mm_mul_ps(vftabscale,rinv20)));
2232 fscal = _mm_andnot_ps(dummy_mask,fscal);
2234 /* Calculate temporary vectorial force */
2235 tx = _mm_mul_ps(fscal,dx20);
2236 ty = _mm_mul_ps(fscal,dy20);
2237 tz = _mm_mul_ps(fscal,dz20);
2239 /* Update vectorial force */
2240 fix2 = _mm_add_ps(fix2,tx);
2241 fiy2 = _mm_add_ps(fiy2,ty);
2242 fiz2 = _mm_add_ps(fiz2,tz);
2244 fjx0 = _mm_add_ps(fjx0,tx);
2245 fjy0 = _mm_add_ps(fjy0,ty);
2246 fjz0 = _mm_add_ps(fjz0,tz);
2248 /**************************
2249 * CALCULATE INTERACTIONS *
2250 **************************/
2252 r21 = _mm_mul_ps(rsq21,rinv21);
2253 r21 = _mm_andnot_ps(dummy_mask,r21);
2255 /* Calculate table index by multiplying r with table scale and truncate to integer */
2256 rt = _mm_mul_ps(r21,vftabscale);
2257 vfitab = _mm_cvttps_epi32(rt);
2258 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
2259 vfitab = _mm_slli_epi32(vfitab,2);
2261 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2262 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
2263 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
2264 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
2265 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
2266 _MM_TRANSPOSE4_PS(Y,F,G,H);
2267 Heps = _mm_mul_ps(vfeps,H);
2268 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
2269 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
2270 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq21,FF),_mm_mul_ps(vftabscale,rinv21)));
2274 fscal = _mm_andnot_ps(dummy_mask,fscal);
2276 /* Calculate temporary vectorial force */
2277 tx = _mm_mul_ps(fscal,dx21);
2278 ty = _mm_mul_ps(fscal,dy21);
2279 tz = _mm_mul_ps(fscal,dz21);
2281 /* Update vectorial force */
2282 fix2 = _mm_add_ps(fix2,tx);
2283 fiy2 = _mm_add_ps(fiy2,ty);
2284 fiz2 = _mm_add_ps(fiz2,tz);
2286 fjx1 = _mm_add_ps(fjx1,tx);
2287 fjy1 = _mm_add_ps(fjy1,ty);
2288 fjz1 = _mm_add_ps(fjz1,tz);
2290 /**************************
2291 * CALCULATE INTERACTIONS *
2292 **************************/
2294 r22 = _mm_mul_ps(rsq22,rinv22);
2295 r22 = _mm_andnot_ps(dummy_mask,r22);
2297 /* Calculate table index by multiplying r with table scale and truncate to integer */
2298 rt = _mm_mul_ps(r22,vftabscale);
2299 vfitab = _mm_cvttps_epi32(rt);
2300 vfeps = _mm_sub_ps(rt,_mm_cvtepi32_ps(vfitab));
2301 vfitab = _mm_slli_epi32(vfitab,2);
2303 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2304 Y = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,0) );
2305 F = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,1) );
2306 G = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,2) );
2307 H = _mm_load_ps( vftab + gmx_mm_extract_epi32(vfitab,3) );
2308 _MM_TRANSPOSE4_PS(Y,F,G,H);
2309 Heps = _mm_mul_ps(vfeps,H);
2310 Fp = _mm_add_ps(F,_mm_mul_ps(vfeps,_mm_add_ps(G,Heps)));
2311 FF = _mm_add_ps(Fp,_mm_mul_ps(vfeps,_mm_add_ps(G,_mm_add_ps(Heps,Heps))));
2312 felec = _mm_xor_ps(signbit,_mm_mul_ps(_mm_mul_ps(qq22,FF),_mm_mul_ps(vftabscale,rinv22)));
2316 fscal = _mm_andnot_ps(dummy_mask,fscal);
2318 /* Calculate temporary vectorial force */
2319 tx = _mm_mul_ps(fscal,dx22);
2320 ty = _mm_mul_ps(fscal,dy22);
2321 tz = _mm_mul_ps(fscal,dz22);
2323 /* Update vectorial force */
2324 fix2 = _mm_add_ps(fix2,tx);
2325 fiy2 = _mm_add_ps(fiy2,ty);
2326 fiz2 = _mm_add_ps(fiz2,tz);
2328 fjx2 = _mm_add_ps(fjx2,tx);
2329 fjy2 = _mm_add_ps(fjy2,ty);
2330 fjz2 = _mm_add_ps(fjz2,tz);
2332 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
2333 f+j_coord_offsetC,f+j_coord_offsetD,
2334 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
2336 /* Inner loop uses 368 flops */
2339 /* End of innermost loop */
2341 gmx_mm_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
2342 f+i_coord_offset,fshift+i_shift_offset);
2344 /* Increment number of inner iterations */
2345 inneriter += j_index_end - j_index_start;
2347 /* Outer loop uses 27 flops */
2350 /* Increment number of outer iterations */
2353 /* Update outer/inner flops */
2355 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_F,outeriter*27 + inneriter*368);