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36 * Note: this file was generated by the GROMACS sparc64_hpc_ace_double kernel generator.
44 #include "../nb_kernel.h"
45 #include "types/simple.h"
49 #include "kernelutil_sparc64_hpc_ace_double.h"
52 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwLJEw_GeomW4P1_VF_sparc64_hpc_ace_double
53 * Electrostatics interaction: Ewald
54 * VdW interaction: LJEwald
55 * Geometry: Water4-Particle
56 * Calculate force/pot: PotentialAndForce
59 nb_kernel_ElecEw_VdwLJEw_GeomW4P1_VF_sparc64_hpc_ace_double
60 (t_nblist * gmx_restrict nlist,
61 rvec * gmx_restrict xx,
62 rvec * gmx_restrict ff,
63 t_forcerec * gmx_restrict fr,
64 t_mdatoms * gmx_restrict mdatoms,
65 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
66 t_nrnb * gmx_restrict nrnb)
68 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
69 * just 0 for non-waters.
70 * Suffixes A,B refer to j loop unrolling done with double precision SIMD, e.g. for the two different
71 * jnr indices corresponding to data put in the four positions in the SIMD register.
73 int i_shift_offset,i_coord_offset,outeriter,inneriter;
74 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
76 int j_coord_offsetA,j_coord_offsetB;
77 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
79 real *shiftvec,*fshift,*x,*f;
80 _fjsp_v2r8 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
82 _fjsp_v2r8 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
84 _fjsp_v2r8 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
86 _fjsp_v2r8 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
88 _fjsp_v2r8 ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
89 int vdwjidx0A,vdwjidx0B;
90 _fjsp_v2r8 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
91 _fjsp_v2r8 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
92 _fjsp_v2r8 dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
93 _fjsp_v2r8 dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
94 _fjsp_v2r8 dx30,dy30,dz30,rsq30,rinv30,rinvsq30,r30,qq30,c6_30,c12_30;
95 _fjsp_v2r8 velec,felec,velecsum,facel,crf,krf,krf2;
98 _fjsp_v2r8 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
101 _fjsp_v2r8 one_sixth = gmx_fjsp_set1_v2r8(1.0/6.0);
102 _fjsp_v2r8 one_twelfth = gmx_fjsp_set1_v2r8(1.0/12.0);
103 _fjsp_v2r8 c6grid_00;
104 _fjsp_v2r8 c6grid_10;
105 _fjsp_v2r8 c6grid_20;
106 _fjsp_v2r8 c6grid_30;
108 _fjsp_v2r8 ewclj,ewclj2,ewclj6,ewcljrsq,poly,exponent,f6A,f6B,sh_lj_ewald;
109 _fjsp_v2r8 one_half = gmx_fjsp_set1_v2r8(0.5);
110 _fjsp_v2r8 minus_one = gmx_fjsp_set1_v2r8(-1.0);
111 _fjsp_v2r8 ewtabscale,eweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
114 _fjsp_v2r8 dummy_mask,cutoff_mask;
115 _fjsp_v2r8 one = gmx_fjsp_set1_v2r8(1.0);
116 _fjsp_v2r8 two = gmx_fjsp_set1_v2r8(2.0);
117 union { _fjsp_v2r8 simd; long long int i[2]; } vfconv,gbconv,ewconv;
124 jindex = nlist->jindex;
126 shiftidx = nlist->shift;
128 shiftvec = fr->shift_vec[0];
129 fshift = fr->fshift[0];
130 facel = gmx_fjsp_set1_v2r8(fr->epsfac);
131 charge = mdatoms->chargeA;
132 nvdwtype = fr->ntype;
134 vdwtype = mdatoms->typeA;
135 vdwgridparam = fr->ljpme_c6grid;
136 sh_lj_ewald = gmx_fjsp_set1_v2r8(fr->ic->sh_lj_ewald);
137 ewclj = gmx_fjsp_set1_v2r8(fr->ewaldcoeff_lj);
138 ewclj2 = _fjsp_mul_v2r8(minus_one,_fjsp_mul_v2r8(ewclj,ewclj));
140 sh_ewald = gmx_fjsp_set1_v2r8(fr->ic->sh_ewald);
141 ewtab = fr->ic->tabq_coul_FDV0;
142 ewtabscale = gmx_fjsp_set1_v2r8(fr->ic->tabq_scale);
143 ewtabhalfspace = gmx_fjsp_set1_v2r8(0.5/fr->ic->tabq_scale);
145 /* Setup water-specific parameters */
146 inr = nlist->iinr[0];
147 iq1 = _fjsp_mul_v2r8(facel,gmx_fjsp_set1_v2r8(charge[inr+1]));
148 iq2 = _fjsp_mul_v2r8(facel,gmx_fjsp_set1_v2r8(charge[inr+2]));
149 iq3 = _fjsp_mul_v2r8(facel,gmx_fjsp_set1_v2r8(charge[inr+3]));
150 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
152 /* Avoid stupid compiler warnings */
160 /* Start outer loop over neighborlists */
161 for(iidx=0; iidx<nri; iidx++)
163 /* Load shift vector for this list */
164 i_shift_offset = DIM*shiftidx[iidx];
166 /* Load limits for loop over neighbors */
167 j_index_start = jindex[iidx];
168 j_index_end = jindex[iidx+1];
170 /* Get outer coordinate index */
172 i_coord_offset = DIM*inr;
174 /* Load i particle coords and add shift vector */
175 gmx_fjsp_load_shift_and_4rvec_broadcast_v2r8(shiftvec+i_shift_offset,x+i_coord_offset,
176 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
178 fix0 = _fjsp_setzero_v2r8();
179 fiy0 = _fjsp_setzero_v2r8();
180 fiz0 = _fjsp_setzero_v2r8();
181 fix1 = _fjsp_setzero_v2r8();
182 fiy1 = _fjsp_setzero_v2r8();
183 fiz1 = _fjsp_setzero_v2r8();
184 fix2 = _fjsp_setzero_v2r8();
185 fiy2 = _fjsp_setzero_v2r8();
186 fiz2 = _fjsp_setzero_v2r8();
187 fix3 = _fjsp_setzero_v2r8();
188 fiy3 = _fjsp_setzero_v2r8();
189 fiz3 = _fjsp_setzero_v2r8();
191 /* Reset potential sums */
192 velecsum = _fjsp_setzero_v2r8();
193 vvdwsum = _fjsp_setzero_v2r8();
195 /* Start inner kernel loop */
196 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
199 /* Get j neighbor index, and coordinate index */
202 j_coord_offsetA = DIM*jnrA;
203 j_coord_offsetB = DIM*jnrB;
205 /* load j atom coordinates */
206 gmx_fjsp_load_1rvec_2ptr_swizzle_v2r8(x+j_coord_offsetA,x+j_coord_offsetB,
209 /* Calculate displacement vector */
210 dx00 = _fjsp_sub_v2r8(ix0,jx0);
211 dy00 = _fjsp_sub_v2r8(iy0,jy0);
212 dz00 = _fjsp_sub_v2r8(iz0,jz0);
213 dx10 = _fjsp_sub_v2r8(ix1,jx0);
214 dy10 = _fjsp_sub_v2r8(iy1,jy0);
215 dz10 = _fjsp_sub_v2r8(iz1,jz0);
216 dx20 = _fjsp_sub_v2r8(ix2,jx0);
217 dy20 = _fjsp_sub_v2r8(iy2,jy0);
218 dz20 = _fjsp_sub_v2r8(iz2,jz0);
219 dx30 = _fjsp_sub_v2r8(ix3,jx0);
220 dy30 = _fjsp_sub_v2r8(iy3,jy0);
221 dz30 = _fjsp_sub_v2r8(iz3,jz0);
223 /* Calculate squared distance and things based on it */
224 rsq00 = gmx_fjsp_calc_rsq_v2r8(dx00,dy00,dz00);
225 rsq10 = gmx_fjsp_calc_rsq_v2r8(dx10,dy10,dz10);
226 rsq20 = gmx_fjsp_calc_rsq_v2r8(dx20,dy20,dz20);
227 rsq30 = gmx_fjsp_calc_rsq_v2r8(dx30,dy30,dz30);
229 rinv00 = gmx_fjsp_invsqrt_v2r8(rsq00);
230 rinv10 = gmx_fjsp_invsqrt_v2r8(rsq10);
231 rinv20 = gmx_fjsp_invsqrt_v2r8(rsq20);
232 rinv30 = gmx_fjsp_invsqrt_v2r8(rsq30);
234 rinvsq00 = _fjsp_mul_v2r8(rinv00,rinv00);
235 rinvsq10 = _fjsp_mul_v2r8(rinv10,rinv10);
236 rinvsq20 = _fjsp_mul_v2r8(rinv20,rinv20);
237 rinvsq30 = _fjsp_mul_v2r8(rinv30,rinv30);
239 /* Load parameters for j particles */
240 jq0 = gmx_fjsp_load_2real_swizzle_v2r8(charge+jnrA+0,charge+jnrB+0);
241 vdwjidx0A = 2*vdwtype[jnrA+0];
242 vdwjidx0B = 2*vdwtype[jnrB+0];
244 fjx0 = _fjsp_setzero_v2r8();
245 fjy0 = _fjsp_setzero_v2r8();
246 fjz0 = _fjsp_setzero_v2r8();
248 /**************************
249 * CALCULATE INTERACTIONS *
250 **************************/
252 r00 = _fjsp_mul_v2r8(rsq00,rinv00);
254 /* Compute parameters for interactions between i and j atoms */
255 gmx_fjsp_load_2pair_swizzle_v2r8(vdwparam+vdwioffset0+vdwjidx0A,
256 vdwparam+vdwioffset0+vdwjidx0B,&c6_00,&c12_00);
258 c6grid_00 = gmx_fjsp_load_2real_swizzle_v2r8(vdwgridparam+vdwioffset0+vdwjidx0A,
259 vdwgridparam+vdwioffset0+vdwjidx0B);
261 /* Analytical LJ-PME */
262 rinvsix = _fjsp_mul_v2r8(_fjsp_mul_v2r8(rinvsq00,rinvsq00),rinvsq00);
263 ewcljrsq = _fjsp_mul_v2r8(ewclj2,rsq00);
264 ewclj6 = _fjsp_mul_v2r8(ewclj2,_fjsp_mul_v2r8(ewclj2,ewclj2));
265 exponent = gmx_simd_exp_d(-ewcljrsq);
266 /* poly = exp(-(beta*r)^2) * (1 + (beta*r)^2 + (beta*r)^4 /2) */
267 poly = _fjsp_mul_v2r8(exponent,_fjsp_madd_v2r8(_fjsp_mul_v2r8(ewcljrsq,ewcljrsq),one_half,_fjsp_sub_v2r8(one,ewcljrsq)));
268 /* vvdw6 = [C6 - C6grid * (1-poly)]/r6 */
269 vvdw6 = _fjsp_mul_v2r8(_fjsp_madd_v2r8(-c6grid_00,_fjsp_sub_v2r8(one,poly),c6_00),rinvsix);
270 vvdw12 = _fjsp_mul_v2r8(c12_00,_fjsp_mul_v2r8(rinvsix,rinvsix));
271 vvdw = _fjsp_msub_v2r8(vvdw12,one_twelfth,_fjsp_mul_v2r8(vvdw6,one_sixth));
272 /* fvdw = vvdw12/r - (vvdw6/r + (C6grid * exponent * beta^6)/r) */
273 fvdw = _fjsp_mul_v2r8(_fjsp_add_v2r8(vvdw12,_fjsp_msub_v2r8(_fjsp_mul_v2r8(c6grid_00,one_sixth),_fjsp_mul_v2r8(exponent,ewclj6),vvdw6)),rinvsq00);
275 /* Update potential sum for this i atom from the interaction with this j atom. */
276 vvdwsum = _fjsp_add_v2r8(vvdwsum,vvdw);
280 /* Update vectorial force */
281 fix0 = _fjsp_madd_v2r8(dx00,fscal,fix0);
282 fiy0 = _fjsp_madd_v2r8(dy00,fscal,fiy0);
283 fiz0 = _fjsp_madd_v2r8(dz00,fscal,fiz0);
285 fjx0 = _fjsp_madd_v2r8(dx00,fscal,fjx0);
286 fjy0 = _fjsp_madd_v2r8(dy00,fscal,fjy0);
287 fjz0 = _fjsp_madd_v2r8(dz00,fscal,fjz0);
289 /**************************
290 * CALCULATE INTERACTIONS *
291 **************************/
293 r10 = _fjsp_mul_v2r8(rsq10,rinv10);
295 /* Compute parameters for interactions between i and j atoms */
296 qq10 = _fjsp_mul_v2r8(iq1,jq0);
298 /* EWALD ELECTROSTATICS */
300 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
301 ewrt = _fjsp_mul_v2r8(r10,ewtabscale);
302 itab_tmp = _fjsp_dtox_v2r8(ewrt);
303 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
304 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
306 ewtabF = _fjsp_load_v2r8( ewtab + 4*ewconv.i[0] );
307 ewtabD = _fjsp_load_v2r8( ewtab + 4*ewconv.i[1] );
308 GMX_FJSP_TRANSPOSE2_V2R8(ewtabF,ewtabD);
309 ewtabV = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[0] +2);
310 ewtabFn = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[1] +2);
311 GMX_FJSP_TRANSPOSE2_V2R8(ewtabV,ewtabFn);
312 felec = _fjsp_madd_v2r8(eweps,ewtabD,ewtabF);
313 velec = _fjsp_nmsub_v2r8(_fjsp_mul_v2r8(ewtabhalfspace,eweps) ,_fjsp_add_v2r8(ewtabF,felec), ewtabV);
314 velec = _fjsp_mul_v2r8(qq10,_fjsp_sub_v2r8(rinv10,velec));
315 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq10,rinv10),_fjsp_sub_v2r8(rinvsq10,felec));
317 /* Update potential sum for this i atom from the interaction with this j atom. */
318 velecsum = _fjsp_add_v2r8(velecsum,velec);
322 /* Update vectorial force */
323 fix1 = _fjsp_madd_v2r8(dx10,fscal,fix1);
324 fiy1 = _fjsp_madd_v2r8(dy10,fscal,fiy1);
325 fiz1 = _fjsp_madd_v2r8(dz10,fscal,fiz1);
327 fjx0 = _fjsp_madd_v2r8(dx10,fscal,fjx0);
328 fjy0 = _fjsp_madd_v2r8(dy10,fscal,fjy0);
329 fjz0 = _fjsp_madd_v2r8(dz10,fscal,fjz0);
331 /**************************
332 * CALCULATE INTERACTIONS *
333 **************************/
335 r20 = _fjsp_mul_v2r8(rsq20,rinv20);
337 /* Compute parameters for interactions between i and j atoms */
338 qq20 = _fjsp_mul_v2r8(iq2,jq0);
340 /* EWALD ELECTROSTATICS */
342 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
343 ewrt = _fjsp_mul_v2r8(r20,ewtabscale);
344 itab_tmp = _fjsp_dtox_v2r8(ewrt);
345 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
346 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
348 ewtabF = _fjsp_load_v2r8( ewtab + 4*ewconv.i[0] );
349 ewtabD = _fjsp_load_v2r8( ewtab + 4*ewconv.i[1] );
350 GMX_FJSP_TRANSPOSE2_V2R8(ewtabF,ewtabD);
351 ewtabV = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[0] +2);
352 ewtabFn = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[1] +2);
353 GMX_FJSP_TRANSPOSE2_V2R8(ewtabV,ewtabFn);
354 felec = _fjsp_madd_v2r8(eweps,ewtabD,ewtabF);
355 velec = _fjsp_nmsub_v2r8(_fjsp_mul_v2r8(ewtabhalfspace,eweps) ,_fjsp_add_v2r8(ewtabF,felec), ewtabV);
356 velec = _fjsp_mul_v2r8(qq20,_fjsp_sub_v2r8(rinv20,velec));
357 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq20,rinv20),_fjsp_sub_v2r8(rinvsq20,felec));
359 /* Update potential sum for this i atom from the interaction with this j atom. */
360 velecsum = _fjsp_add_v2r8(velecsum,velec);
364 /* Update vectorial force */
365 fix2 = _fjsp_madd_v2r8(dx20,fscal,fix2);
366 fiy2 = _fjsp_madd_v2r8(dy20,fscal,fiy2);
367 fiz2 = _fjsp_madd_v2r8(dz20,fscal,fiz2);
369 fjx0 = _fjsp_madd_v2r8(dx20,fscal,fjx0);
370 fjy0 = _fjsp_madd_v2r8(dy20,fscal,fjy0);
371 fjz0 = _fjsp_madd_v2r8(dz20,fscal,fjz0);
373 /**************************
374 * CALCULATE INTERACTIONS *
375 **************************/
377 r30 = _fjsp_mul_v2r8(rsq30,rinv30);
379 /* Compute parameters for interactions between i and j atoms */
380 qq30 = _fjsp_mul_v2r8(iq3,jq0);
382 /* EWALD ELECTROSTATICS */
384 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
385 ewrt = _fjsp_mul_v2r8(r30,ewtabscale);
386 itab_tmp = _fjsp_dtox_v2r8(ewrt);
387 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
388 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
390 ewtabF = _fjsp_load_v2r8( ewtab + 4*ewconv.i[0] );
391 ewtabD = _fjsp_load_v2r8( ewtab + 4*ewconv.i[1] );
392 GMX_FJSP_TRANSPOSE2_V2R8(ewtabF,ewtabD);
393 ewtabV = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[0] +2);
394 ewtabFn = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[1] +2);
395 GMX_FJSP_TRANSPOSE2_V2R8(ewtabV,ewtabFn);
396 felec = _fjsp_madd_v2r8(eweps,ewtabD,ewtabF);
397 velec = _fjsp_nmsub_v2r8(_fjsp_mul_v2r8(ewtabhalfspace,eweps) ,_fjsp_add_v2r8(ewtabF,felec), ewtabV);
398 velec = _fjsp_mul_v2r8(qq30,_fjsp_sub_v2r8(rinv30,velec));
399 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq30,rinv30),_fjsp_sub_v2r8(rinvsq30,felec));
401 /* Update potential sum for this i atom from the interaction with this j atom. */
402 velecsum = _fjsp_add_v2r8(velecsum,velec);
406 /* Update vectorial force */
407 fix3 = _fjsp_madd_v2r8(dx30,fscal,fix3);
408 fiy3 = _fjsp_madd_v2r8(dy30,fscal,fiy3);
409 fiz3 = _fjsp_madd_v2r8(dz30,fscal,fiz3);
411 fjx0 = _fjsp_madd_v2r8(dx30,fscal,fjx0);
412 fjy0 = _fjsp_madd_v2r8(dy30,fscal,fjy0);
413 fjz0 = _fjsp_madd_v2r8(dz30,fscal,fjz0);
415 gmx_fjsp_decrement_1rvec_2ptr_swizzle_v2r8(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0);
417 /* Inner loop uses 185 flops */
424 j_coord_offsetA = DIM*jnrA;
426 /* load j atom coordinates */
427 gmx_fjsp_load_1rvec_1ptr_swizzle_v2r8(x+j_coord_offsetA,
430 /* Calculate displacement vector */
431 dx00 = _fjsp_sub_v2r8(ix0,jx0);
432 dy00 = _fjsp_sub_v2r8(iy0,jy0);
433 dz00 = _fjsp_sub_v2r8(iz0,jz0);
434 dx10 = _fjsp_sub_v2r8(ix1,jx0);
435 dy10 = _fjsp_sub_v2r8(iy1,jy0);
436 dz10 = _fjsp_sub_v2r8(iz1,jz0);
437 dx20 = _fjsp_sub_v2r8(ix2,jx0);
438 dy20 = _fjsp_sub_v2r8(iy2,jy0);
439 dz20 = _fjsp_sub_v2r8(iz2,jz0);
440 dx30 = _fjsp_sub_v2r8(ix3,jx0);
441 dy30 = _fjsp_sub_v2r8(iy3,jy0);
442 dz30 = _fjsp_sub_v2r8(iz3,jz0);
444 /* Calculate squared distance and things based on it */
445 rsq00 = gmx_fjsp_calc_rsq_v2r8(dx00,dy00,dz00);
446 rsq10 = gmx_fjsp_calc_rsq_v2r8(dx10,dy10,dz10);
447 rsq20 = gmx_fjsp_calc_rsq_v2r8(dx20,dy20,dz20);
448 rsq30 = gmx_fjsp_calc_rsq_v2r8(dx30,dy30,dz30);
450 rinv00 = gmx_fjsp_invsqrt_v2r8(rsq00);
451 rinv10 = gmx_fjsp_invsqrt_v2r8(rsq10);
452 rinv20 = gmx_fjsp_invsqrt_v2r8(rsq20);
453 rinv30 = gmx_fjsp_invsqrt_v2r8(rsq30);
455 rinvsq00 = _fjsp_mul_v2r8(rinv00,rinv00);
456 rinvsq10 = _fjsp_mul_v2r8(rinv10,rinv10);
457 rinvsq20 = _fjsp_mul_v2r8(rinv20,rinv20);
458 rinvsq30 = _fjsp_mul_v2r8(rinv30,rinv30);
460 /* Load parameters for j particles */
461 jq0 = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(),charge+jnrA+0);
462 vdwjidx0A = 2*vdwtype[jnrA+0];
464 fjx0 = _fjsp_setzero_v2r8();
465 fjy0 = _fjsp_setzero_v2r8();
466 fjz0 = _fjsp_setzero_v2r8();
468 /**************************
469 * CALCULATE INTERACTIONS *
470 **************************/
472 r00 = _fjsp_mul_v2r8(rsq00,rinv00);
474 /* Compute parameters for interactions between i and j atoms */
475 gmx_fjsp_load_1pair_swizzle_v2r8(vdwparam+vdwioffset0+vdwjidx0A,&c6_00,&c12_00);
477 c6grid_00 = gmx_fjsp_load_1real_swizzle_v2r8(vdwgridparam+vdwioffset0+vdwjidx0A);
479 /* Analytical LJ-PME */
480 rinvsix = _fjsp_mul_v2r8(_fjsp_mul_v2r8(rinvsq00,rinvsq00),rinvsq00);
481 ewcljrsq = _fjsp_mul_v2r8(ewclj2,rsq00);
482 ewclj6 = _fjsp_mul_v2r8(ewclj2,_fjsp_mul_v2r8(ewclj2,ewclj2));
483 exponent = gmx_simd_exp_d(-ewcljrsq);
484 /* poly = exp(-(beta*r)^2) * (1 + (beta*r)^2 + (beta*r)^4 /2) */
485 poly = _fjsp_mul_v2r8(exponent,_fjsp_madd_v2r8(_fjsp_mul_v2r8(ewcljrsq,ewcljrsq),one_half,_fjsp_sub_v2r8(one,ewcljrsq)));
486 /* vvdw6 = [C6 - C6grid * (1-poly)]/r6 */
487 vvdw6 = _fjsp_mul_v2r8(_fjsp_madd_v2r8(-c6grid_00,_fjsp_sub_v2r8(one,poly),c6_00),rinvsix);
488 vvdw12 = _fjsp_mul_v2r8(c12_00,_fjsp_mul_v2r8(rinvsix,rinvsix));
489 vvdw = _fjsp_msub_v2r8(vvdw12,one_twelfth,_fjsp_mul_v2r8(vvdw6,one_sixth));
490 /* fvdw = vvdw12/r - (vvdw6/r + (C6grid * exponent * beta^6)/r) */
491 fvdw = _fjsp_mul_v2r8(_fjsp_add_v2r8(vvdw12,_fjsp_msub_v2r8(_fjsp_mul_v2r8(c6grid_00,one_sixth),_fjsp_mul_v2r8(exponent,ewclj6),vvdw6)),rinvsq00);
493 /* Update potential sum for this i atom from the interaction with this j atom. */
494 vvdw = _fjsp_unpacklo_v2r8(vvdw,_fjsp_setzero_v2r8());
495 vvdwsum = _fjsp_add_v2r8(vvdwsum,vvdw);
499 fscal = _fjsp_unpacklo_v2r8(fscal,_fjsp_setzero_v2r8());
501 /* Update vectorial force */
502 fix0 = _fjsp_madd_v2r8(dx00,fscal,fix0);
503 fiy0 = _fjsp_madd_v2r8(dy00,fscal,fiy0);
504 fiz0 = _fjsp_madd_v2r8(dz00,fscal,fiz0);
506 fjx0 = _fjsp_madd_v2r8(dx00,fscal,fjx0);
507 fjy0 = _fjsp_madd_v2r8(dy00,fscal,fjy0);
508 fjz0 = _fjsp_madd_v2r8(dz00,fscal,fjz0);
510 /**************************
511 * CALCULATE INTERACTIONS *
512 **************************/
514 r10 = _fjsp_mul_v2r8(rsq10,rinv10);
516 /* Compute parameters for interactions between i and j atoms */
517 qq10 = _fjsp_mul_v2r8(iq1,jq0);
519 /* EWALD ELECTROSTATICS */
521 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
522 ewrt = _fjsp_mul_v2r8(r10,ewtabscale);
523 itab_tmp = _fjsp_dtox_v2r8(ewrt);
524 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
525 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
527 ewtabF = _fjsp_load_v2r8( ewtab + 4*ewconv.i[0] );
528 ewtabD = _fjsp_setzero_v2r8();
529 GMX_FJSP_TRANSPOSE2_V2R8(ewtabF,ewtabD);
530 ewtabV = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[0] +2);
531 ewtabFn = _fjsp_setzero_v2r8();
532 GMX_FJSP_TRANSPOSE2_V2R8(ewtabV,ewtabFn);
533 felec = _fjsp_madd_v2r8(eweps,ewtabD,ewtabF);
534 velec = _fjsp_nmsub_v2r8(_fjsp_mul_v2r8(ewtabhalfspace,eweps) ,_fjsp_add_v2r8(ewtabF,felec), ewtabV);
535 velec = _fjsp_mul_v2r8(qq10,_fjsp_sub_v2r8(rinv10,velec));
536 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq10,rinv10),_fjsp_sub_v2r8(rinvsq10,felec));
538 /* Update potential sum for this i atom from the interaction with this j atom. */
539 velec = _fjsp_unpacklo_v2r8(velec,_fjsp_setzero_v2r8());
540 velecsum = _fjsp_add_v2r8(velecsum,velec);
544 fscal = _fjsp_unpacklo_v2r8(fscal,_fjsp_setzero_v2r8());
546 /* Update vectorial force */
547 fix1 = _fjsp_madd_v2r8(dx10,fscal,fix1);
548 fiy1 = _fjsp_madd_v2r8(dy10,fscal,fiy1);
549 fiz1 = _fjsp_madd_v2r8(dz10,fscal,fiz1);
551 fjx0 = _fjsp_madd_v2r8(dx10,fscal,fjx0);
552 fjy0 = _fjsp_madd_v2r8(dy10,fscal,fjy0);
553 fjz0 = _fjsp_madd_v2r8(dz10,fscal,fjz0);
555 /**************************
556 * CALCULATE INTERACTIONS *
557 **************************/
559 r20 = _fjsp_mul_v2r8(rsq20,rinv20);
561 /* Compute parameters for interactions between i and j atoms */
562 qq20 = _fjsp_mul_v2r8(iq2,jq0);
564 /* EWALD ELECTROSTATICS */
566 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
567 ewrt = _fjsp_mul_v2r8(r20,ewtabscale);
568 itab_tmp = _fjsp_dtox_v2r8(ewrt);
569 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
570 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
572 ewtabF = _fjsp_load_v2r8( ewtab + 4*ewconv.i[0] );
573 ewtabD = _fjsp_setzero_v2r8();
574 GMX_FJSP_TRANSPOSE2_V2R8(ewtabF,ewtabD);
575 ewtabV = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[0] +2);
576 ewtabFn = _fjsp_setzero_v2r8();
577 GMX_FJSP_TRANSPOSE2_V2R8(ewtabV,ewtabFn);
578 felec = _fjsp_madd_v2r8(eweps,ewtabD,ewtabF);
579 velec = _fjsp_nmsub_v2r8(_fjsp_mul_v2r8(ewtabhalfspace,eweps) ,_fjsp_add_v2r8(ewtabF,felec), ewtabV);
580 velec = _fjsp_mul_v2r8(qq20,_fjsp_sub_v2r8(rinv20,velec));
581 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq20,rinv20),_fjsp_sub_v2r8(rinvsq20,felec));
583 /* Update potential sum for this i atom from the interaction with this j atom. */
584 velec = _fjsp_unpacklo_v2r8(velec,_fjsp_setzero_v2r8());
585 velecsum = _fjsp_add_v2r8(velecsum,velec);
589 fscal = _fjsp_unpacklo_v2r8(fscal,_fjsp_setzero_v2r8());
591 /* Update vectorial force */
592 fix2 = _fjsp_madd_v2r8(dx20,fscal,fix2);
593 fiy2 = _fjsp_madd_v2r8(dy20,fscal,fiy2);
594 fiz2 = _fjsp_madd_v2r8(dz20,fscal,fiz2);
596 fjx0 = _fjsp_madd_v2r8(dx20,fscal,fjx0);
597 fjy0 = _fjsp_madd_v2r8(dy20,fscal,fjy0);
598 fjz0 = _fjsp_madd_v2r8(dz20,fscal,fjz0);
600 /**************************
601 * CALCULATE INTERACTIONS *
602 **************************/
604 r30 = _fjsp_mul_v2r8(rsq30,rinv30);
606 /* Compute parameters for interactions between i and j atoms */
607 qq30 = _fjsp_mul_v2r8(iq3,jq0);
609 /* EWALD ELECTROSTATICS */
611 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
612 ewrt = _fjsp_mul_v2r8(r30,ewtabscale);
613 itab_tmp = _fjsp_dtox_v2r8(ewrt);
614 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
615 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
617 ewtabF = _fjsp_load_v2r8( ewtab + 4*ewconv.i[0] );
618 ewtabD = _fjsp_setzero_v2r8();
619 GMX_FJSP_TRANSPOSE2_V2R8(ewtabF,ewtabD);
620 ewtabV = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[0] +2);
621 ewtabFn = _fjsp_setzero_v2r8();
622 GMX_FJSP_TRANSPOSE2_V2R8(ewtabV,ewtabFn);
623 felec = _fjsp_madd_v2r8(eweps,ewtabD,ewtabF);
624 velec = _fjsp_nmsub_v2r8(_fjsp_mul_v2r8(ewtabhalfspace,eweps) ,_fjsp_add_v2r8(ewtabF,felec), ewtabV);
625 velec = _fjsp_mul_v2r8(qq30,_fjsp_sub_v2r8(rinv30,velec));
626 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq30,rinv30),_fjsp_sub_v2r8(rinvsq30,felec));
628 /* Update potential sum for this i atom from the interaction with this j atom. */
629 velec = _fjsp_unpacklo_v2r8(velec,_fjsp_setzero_v2r8());
630 velecsum = _fjsp_add_v2r8(velecsum,velec);
634 fscal = _fjsp_unpacklo_v2r8(fscal,_fjsp_setzero_v2r8());
636 /* Update vectorial force */
637 fix3 = _fjsp_madd_v2r8(dx30,fscal,fix3);
638 fiy3 = _fjsp_madd_v2r8(dy30,fscal,fiy3);
639 fiz3 = _fjsp_madd_v2r8(dz30,fscal,fiz3);
641 fjx0 = _fjsp_madd_v2r8(dx30,fscal,fjx0);
642 fjy0 = _fjsp_madd_v2r8(dy30,fscal,fjy0);
643 fjz0 = _fjsp_madd_v2r8(dz30,fscal,fjz0);
645 gmx_fjsp_decrement_1rvec_1ptr_swizzle_v2r8(f+j_coord_offsetA,fjx0,fjy0,fjz0);
647 /* Inner loop uses 185 flops */
650 /* End of innermost loop */
652 gmx_fjsp_update_iforce_4atom_swizzle_v2r8(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
653 f+i_coord_offset,fshift+i_shift_offset);
656 /* Update potential energies */
657 gmx_fjsp_update_1pot_v2r8(velecsum,kernel_data->energygrp_elec+ggid);
658 gmx_fjsp_update_1pot_v2r8(vvdwsum,kernel_data->energygrp_vdw+ggid);
660 /* Increment number of inner iterations */
661 inneriter += j_index_end - j_index_start;
663 /* Outer loop uses 26 flops */
666 /* Increment number of outer iterations */
669 /* Update outer/inner flops */
671 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W4_VF,outeriter*26 + inneriter*185);
674 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwLJEw_GeomW4P1_F_sparc64_hpc_ace_double
675 * Electrostatics interaction: Ewald
676 * VdW interaction: LJEwald
677 * Geometry: Water4-Particle
678 * Calculate force/pot: Force
681 nb_kernel_ElecEw_VdwLJEw_GeomW4P1_F_sparc64_hpc_ace_double
682 (t_nblist * gmx_restrict nlist,
683 rvec * gmx_restrict xx,
684 rvec * gmx_restrict ff,
685 t_forcerec * gmx_restrict fr,
686 t_mdatoms * gmx_restrict mdatoms,
687 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
688 t_nrnb * gmx_restrict nrnb)
690 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
691 * just 0 for non-waters.
692 * Suffixes A,B refer to j loop unrolling done with double precision SIMD, e.g. for the two different
693 * jnr indices corresponding to data put in the four positions in the SIMD register.
695 int i_shift_offset,i_coord_offset,outeriter,inneriter;
696 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
698 int j_coord_offsetA,j_coord_offsetB;
699 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
701 real *shiftvec,*fshift,*x,*f;
702 _fjsp_v2r8 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
704 _fjsp_v2r8 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
706 _fjsp_v2r8 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
708 _fjsp_v2r8 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
710 _fjsp_v2r8 ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
711 int vdwjidx0A,vdwjidx0B;
712 _fjsp_v2r8 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
713 _fjsp_v2r8 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
714 _fjsp_v2r8 dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
715 _fjsp_v2r8 dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
716 _fjsp_v2r8 dx30,dy30,dz30,rsq30,rinv30,rinvsq30,r30,qq30,c6_30,c12_30;
717 _fjsp_v2r8 velec,felec,velecsum,facel,crf,krf,krf2;
720 _fjsp_v2r8 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
723 _fjsp_v2r8 one_sixth = gmx_fjsp_set1_v2r8(1.0/6.0);
724 _fjsp_v2r8 one_twelfth = gmx_fjsp_set1_v2r8(1.0/12.0);
725 _fjsp_v2r8 c6grid_00;
726 _fjsp_v2r8 c6grid_10;
727 _fjsp_v2r8 c6grid_20;
728 _fjsp_v2r8 c6grid_30;
730 _fjsp_v2r8 ewclj,ewclj2,ewclj6,ewcljrsq,poly,exponent,f6A,f6B,sh_lj_ewald;
731 _fjsp_v2r8 one_half = gmx_fjsp_set1_v2r8(0.5);
732 _fjsp_v2r8 minus_one = gmx_fjsp_set1_v2r8(-1.0);
733 _fjsp_v2r8 ewtabscale,eweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
736 _fjsp_v2r8 dummy_mask,cutoff_mask;
737 _fjsp_v2r8 one = gmx_fjsp_set1_v2r8(1.0);
738 _fjsp_v2r8 two = gmx_fjsp_set1_v2r8(2.0);
739 union { _fjsp_v2r8 simd; long long int i[2]; } vfconv,gbconv,ewconv;
746 jindex = nlist->jindex;
748 shiftidx = nlist->shift;
750 shiftvec = fr->shift_vec[0];
751 fshift = fr->fshift[0];
752 facel = gmx_fjsp_set1_v2r8(fr->epsfac);
753 charge = mdatoms->chargeA;
754 nvdwtype = fr->ntype;
756 vdwtype = mdatoms->typeA;
757 vdwgridparam = fr->ljpme_c6grid;
758 sh_lj_ewald = gmx_fjsp_set1_v2r8(fr->ic->sh_lj_ewald);
759 ewclj = gmx_fjsp_set1_v2r8(fr->ewaldcoeff_lj);
760 ewclj2 = _fjsp_mul_v2r8(minus_one,_fjsp_mul_v2r8(ewclj,ewclj));
762 sh_ewald = gmx_fjsp_set1_v2r8(fr->ic->sh_ewald);
763 ewtab = fr->ic->tabq_coul_F;
764 ewtabscale = gmx_fjsp_set1_v2r8(fr->ic->tabq_scale);
765 ewtabhalfspace = gmx_fjsp_set1_v2r8(0.5/fr->ic->tabq_scale);
767 /* Setup water-specific parameters */
768 inr = nlist->iinr[0];
769 iq1 = _fjsp_mul_v2r8(facel,gmx_fjsp_set1_v2r8(charge[inr+1]));
770 iq2 = _fjsp_mul_v2r8(facel,gmx_fjsp_set1_v2r8(charge[inr+2]));
771 iq3 = _fjsp_mul_v2r8(facel,gmx_fjsp_set1_v2r8(charge[inr+3]));
772 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
774 /* Avoid stupid compiler warnings */
782 /* Start outer loop over neighborlists */
783 for(iidx=0; iidx<nri; iidx++)
785 /* Load shift vector for this list */
786 i_shift_offset = DIM*shiftidx[iidx];
788 /* Load limits for loop over neighbors */
789 j_index_start = jindex[iidx];
790 j_index_end = jindex[iidx+1];
792 /* Get outer coordinate index */
794 i_coord_offset = DIM*inr;
796 /* Load i particle coords and add shift vector */
797 gmx_fjsp_load_shift_and_4rvec_broadcast_v2r8(shiftvec+i_shift_offset,x+i_coord_offset,
798 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
800 fix0 = _fjsp_setzero_v2r8();
801 fiy0 = _fjsp_setzero_v2r8();
802 fiz0 = _fjsp_setzero_v2r8();
803 fix1 = _fjsp_setzero_v2r8();
804 fiy1 = _fjsp_setzero_v2r8();
805 fiz1 = _fjsp_setzero_v2r8();
806 fix2 = _fjsp_setzero_v2r8();
807 fiy2 = _fjsp_setzero_v2r8();
808 fiz2 = _fjsp_setzero_v2r8();
809 fix3 = _fjsp_setzero_v2r8();
810 fiy3 = _fjsp_setzero_v2r8();
811 fiz3 = _fjsp_setzero_v2r8();
813 /* Start inner kernel loop */
814 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
817 /* Get j neighbor index, and coordinate index */
820 j_coord_offsetA = DIM*jnrA;
821 j_coord_offsetB = DIM*jnrB;
823 /* load j atom coordinates */
824 gmx_fjsp_load_1rvec_2ptr_swizzle_v2r8(x+j_coord_offsetA,x+j_coord_offsetB,
827 /* Calculate displacement vector */
828 dx00 = _fjsp_sub_v2r8(ix0,jx0);
829 dy00 = _fjsp_sub_v2r8(iy0,jy0);
830 dz00 = _fjsp_sub_v2r8(iz0,jz0);
831 dx10 = _fjsp_sub_v2r8(ix1,jx0);
832 dy10 = _fjsp_sub_v2r8(iy1,jy0);
833 dz10 = _fjsp_sub_v2r8(iz1,jz0);
834 dx20 = _fjsp_sub_v2r8(ix2,jx0);
835 dy20 = _fjsp_sub_v2r8(iy2,jy0);
836 dz20 = _fjsp_sub_v2r8(iz2,jz0);
837 dx30 = _fjsp_sub_v2r8(ix3,jx0);
838 dy30 = _fjsp_sub_v2r8(iy3,jy0);
839 dz30 = _fjsp_sub_v2r8(iz3,jz0);
841 /* Calculate squared distance and things based on it */
842 rsq00 = gmx_fjsp_calc_rsq_v2r8(dx00,dy00,dz00);
843 rsq10 = gmx_fjsp_calc_rsq_v2r8(dx10,dy10,dz10);
844 rsq20 = gmx_fjsp_calc_rsq_v2r8(dx20,dy20,dz20);
845 rsq30 = gmx_fjsp_calc_rsq_v2r8(dx30,dy30,dz30);
847 rinv00 = gmx_fjsp_invsqrt_v2r8(rsq00);
848 rinv10 = gmx_fjsp_invsqrt_v2r8(rsq10);
849 rinv20 = gmx_fjsp_invsqrt_v2r8(rsq20);
850 rinv30 = gmx_fjsp_invsqrt_v2r8(rsq30);
852 rinvsq00 = _fjsp_mul_v2r8(rinv00,rinv00);
853 rinvsq10 = _fjsp_mul_v2r8(rinv10,rinv10);
854 rinvsq20 = _fjsp_mul_v2r8(rinv20,rinv20);
855 rinvsq30 = _fjsp_mul_v2r8(rinv30,rinv30);
857 /* Load parameters for j particles */
858 jq0 = gmx_fjsp_load_2real_swizzle_v2r8(charge+jnrA+0,charge+jnrB+0);
859 vdwjidx0A = 2*vdwtype[jnrA+0];
860 vdwjidx0B = 2*vdwtype[jnrB+0];
862 fjx0 = _fjsp_setzero_v2r8();
863 fjy0 = _fjsp_setzero_v2r8();
864 fjz0 = _fjsp_setzero_v2r8();
866 /**************************
867 * CALCULATE INTERACTIONS *
868 **************************/
870 r00 = _fjsp_mul_v2r8(rsq00,rinv00);
872 /* Compute parameters for interactions between i and j atoms */
873 gmx_fjsp_load_2pair_swizzle_v2r8(vdwparam+vdwioffset0+vdwjidx0A,
874 vdwparam+vdwioffset0+vdwjidx0B,&c6_00,&c12_00);
876 c6grid_00 = gmx_fjsp_load_2real_swizzle_v2r8(vdwgridparam+vdwioffset0+vdwjidx0A,
877 vdwgridparam+vdwioffset0+vdwjidx0B);
879 /* Analytical LJ-PME */
880 rinvsix = _fjsp_mul_v2r8(_fjsp_mul_v2r8(rinvsq00,rinvsq00),rinvsq00);
881 ewcljrsq = _fjsp_mul_v2r8(ewclj2,rsq00);
882 ewclj6 = _fjsp_mul_v2r8(ewclj2,_fjsp_mul_v2r8(ewclj2,ewclj2));
883 exponent = gmx_simd_exp_d(-ewcljrsq);
884 /* poly = exp(-(beta*r)^2) * (1 + (beta*r)^2 + (beta*r)^4 /2) */
885 poly = _fjsp_mul_v2r8(exponent,_fjsp_madd_v2r8(_fjsp_mul_v2r8(ewcljrsq,ewcljrsq),one_half,_fjsp_sub_v2r8(one,ewcljrsq)));
886 /* f6A = 6 * C6grid * (1 - poly) */
887 f6A = _fjsp_mul_v2r8(c6grid_00,_fjsp_msub_v2r8(one,poly));
888 /* f6B = C6grid * exponent * beta^6 */
889 f6B = _fjsp_mul_v2r8(_fjsp_mul_v2r8(c6grid_00,one_sixth),_fjsp_mul_v2r8(exponent,ewclj6));
890 /* fvdw = 12*C12/r13 - ((6*C6 - f6A)/r6 + f6B)/r */
891 fvdw = _fjsp_mul_v2r8(_fjsp_madd_v2r8(_fjsp_msub_v2r8(c12_00,rinvsix,_fjsp_sub_v2r8(c6_00,f6A)),rinvsix,f6B),rinvsq00);
895 /* Update vectorial force */
896 fix0 = _fjsp_madd_v2r8(dx00,fscal,fix0);
897 fiy0 = _fjsp_madd_v2r8(dy00,fscal,fiy0);
898 fiz0 = _fjsp_madd_v2r8(dz00,fscal,fiz0);
900 fjx0 = _fjsp_madd_v2r8(dx00,fscal,fjx0);
901 fjy0 = _fjsp_madd_v2r8(dy00,fscal,fjy0);
902 fjz0 = _fjsp_madd_v2r8(dz00,fscal,fjz0);
904 /**************************
905 * CALCULATE INTERACTIONS *
906 **************************/
908 r10 = _fjsp_mul_v2r8(rsq10,rinv10);
910 /* Compute parameters for interactions between i and j atoms */
911 qq10 = _fjsp_mul_v2r8(iq1,jq0);
913 /* EWALD ELECTROSTATICS */
915 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
916 ewrt = _fjsp_mul_v2r8(r10,ewtabscale);
917 itab_tmp = _fjsp_dtox_v2r8(ewrt);
918 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
919 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
921 gmx_fjsp_load_2pair_swizzle_v2r8(ewtab+ewconv.i[0],ewtab+ewconv.i[1],
923 felec = _fjsp_madd_v2r8(eweps,ewtabFn,_fjsp_nmsub_v2r8(eweps,ewtabF,ewtabF));
924 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq10,rinv10),_fjsp_sub_v2r8(rinvsq10,felec));
928 /* Update vectorial force */
929 fix1 = _fjsp_madd_v2r8(dx10,fscal,fix1);
930 fiy1 = _fjsp_madd_v2r8(dy10,fscal,fiy1);
931 fiz1 = _fjsp_madd_v2r8(dz10,fscal,fiz1);
933 fjx0 = _fjsp_madd_v2r8(dx10,fscal,fjx0);
934 fjy0 = _fjsp_madd_v2r8(dy10,fscal,fjy0);
935 fjz0 = _fjsp_madd_v2r8(dz10,fscal,fjz0);
937 /**************************
938 * CALCULATE INTERACTIONS *
939 **************************/
941 r20 = _fjsp_mul_v2r8(rsq20,rinv20);
943 /* Compute parameters for interactions between i and j atoms */
944 qq20 = _fjsp_mul_v2r8(iq2,jq0);
946 /* EWALD ELECTROSTATICS */
948 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
949 ewrt = _fjsp_mul_v2r8(r20,ewtabscale);
950 itab_tmp = _fjsp_dtox_v2r8(ewrt);
951 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
952 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
954 gmx_fjsp_load_2pair_swizzle_v2r8(ewtab+ewconv.i[0],ewtab+ewconv.i[1],
956 felec = _fjsp_madd_v2r8(eweps,ewtabFn,_fjsp_nmsub_v2r8(eweps,ewtabF,ewtabF));
957 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq20,rinv20),_fjsp_sub_v2r8(rinvsq20,felec));
961 /* Update vectorial force */
962 fix2 = _fjsp_madd_v2r8(dx20,fscal,fix2);
963 fiy2 = _fjsp_madd_v2r8(dy20,fscal,fiy2);
964 fiz2 = _fjsp_madd_v2r8(dz20,fscal,fiz2);
966 fjx0 = _fjsp_madd_v2r8(dx20,fscal,fjx0);
967 fjy0 = _fjsp_madd_v2r8(dy20,fscal,fjy0);
968 fjz0 = _fjsp_madd_v2r8(dz20,fscal,fjz0);
970 /**************************
971 * CALCULATE INTERACTIONS *
972 **************************/
974 r30 = _fjsp_mul_v2r8(rsq30,rinv30);
976 /* Compute parameters for interactions between i and j atoms */
977 qq30 = _fjsp_mul_v2r8(iq3,jq0);
979 /* EWALD ELECTROSTATICS */
981 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
982 ewrt = _fjsp_mul_v2r8(r30,ewtabscale);
983 itab_tmp = _fjsp_dtox_v2r8(ewrt);
984 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
985 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
987 gmx_fjsp_load_2pair_swizzle_v2r8(ewtab+ewconv.i[0],ewtab+ewconv.i[1],
989 felec = _fjsp_madd_v2r8(eweps,ewtabFn,_fjsp_nmsub_v2r8(eweps,ewtabF,ewtabF));
990 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq30,rinv30),_fjsp_sub_v2r8(rinvsq30,felec));
994 /* Update vectorial force */
995 fix3 = _fjsp_madd_v2r8(dx30,fscal,fix3);
996 fiy3 = _fjsp_madd_v2r8(dy30,fscal,fiy3);
997 fiz3 = _fjsp_madd_v2r8(dz30,fscal,fiz3);
999 fjx0 = _fjsp_madd_v2r8(dx30,fscal,fjx0);
1000 fjy0 = _fjsp_madd_v2r8(dy30,fscal,fjy0);
1001 fjz0 = _fjsp_madd_v2r8(dz30,fscal,fjz0);
1003 gmx_fjsp_decrement_1rvec_2ptr_swizzle_v2r8(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0);
1005 /* Inner loop uses 168 flops */
1008 if(jidx<j_index_end)
1012 j_coord_offsetA = DIM*jnrA;
1014 /* load j atom coordinates */
1015 gmx_fjsp_load_1rvec_1ptr_swizzle_v2r8(x+j_coord_offsetA,
1018 /* Calculate displacement vector */
1019 dx00 = _fjsp_sub_v2r8(ix0,jx0);
1020 dy00 = _fjsp_sub_v2r8(iy0,jy0);
1021 dz00 = _fjsp_sub_v2r8(iz0,jz0);
1022 dx10 = _fjsp_sub_v2r8(ix1,jx0);
1023 dy10 = _fjsp_sub_v2r8(iy1,jy0);
1024 dz10 = _fjsp_sub_v2r8(iz1,jz0);
1025 dx20 = _fjsp_sub_v2r8(ix2,jx0);
1026 dy20 = _fjsp_sub_v2r8(iy2,jy0);
1027 dz20 = _fjsp_sub_v2r8(iz2,jz0);
1028 dx30 = _fjsp_sub_v2r8(ix3,jx0);
1029 dy30 = _fjsp_sub_v2r8(iy3,jy0);
1030 dz30 = _fjsp_sub_v2r8(iz3,jz0);
1032 /* Calculate squared distance and things based on it */
1033 rsq00 = gmx_fjsp_calc_rsq_v2r8(dx00,dy00,dz00);
1034 rsq10 = gmx_fjsp_calc_rsq_v2r8(dx10,dy10,dz10);
1035 rsq20 = gmx_fjsp_calc_rsq_v2r8(dx20,dy20,dz20);
1036 rsq30 = gmx_fjsp_calc_rsq_v2r8(dx30,dy30,dz30);
1038 rinv00 = gmx_fjsp_invsqrt_v2r8(rsq00);
1039 rinv10 = gmx_fjsp_invsqrt_v2r8(rsq10);
1040 rinv20 = gmx_fjsp_invsqrt_v2r8(rsq20);
1041 rinv30 = gmx_fjsp_invsqrt_v2r8(rsq30);
1043 rinvsq00 = _fjsp_mul_v2r8(rinv00,rinv00);
1044 rinvsq10 = _fjsp_mul_v2r8(rinv10,rinv10);
1045 rinvsq20 = _fjsp_mul_v2r8(rinv20,rinv20);
1046 rinvsq30 = _fjsp_mul_v2r8(rinv30,rinv30);
1048 /* Load parameters for j particles */
1049 jq0 = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(),charge+jnrA+0);
1050 vdwjidx0A = 2*vdwtype[jnrA+0];
1052 fjx0 = _fjsp_setzero_v2r8();
1053 fjy0 = _fjsp_setzero_v2r8();
1054 fjz0 = _fjsp_setzero_v2r8();
1056 /**************************
1057 * CALCULATE INTERACTIONS *
1058 **************************/
1060 r00 = _fjsp_mul_v2r8(rsq00,rinv00);
1062 /* Compute parameters for interactions between i and j atoms */
1063 gmx_fjsp_load_1pair_swizzle_v2r8(vdwparam+vdwioffset0+vdwjidx0A,&c6_00,&c12_00);
1065 c6grid_00 = gmx_fjsp_load_1real_swizzle_v2r8(vdwgridparam+vdwioffset0+vdwjidx0A);
1067 /* Analytical LJ-PME */
1068 rinvsix = _fjsp_mul_v2r8(_fjsp_mul_v2r8(rinvsq00,rinvsq00),rinvsq00);
1069 ewcljrsq = _fjsp_mul_v2r8(ewclj2,rsq00);
1070 ewclj6 = _fjsp_mul_v2r8(ewclj2,_fjsp_mul_v2r8(ewclj2,ewclj2));
1071 exponent = gmx_simd_exp_d(-ewcljrsq);
1072 /* poly = exp(-(beta*r)^2) * (1 + (beta*r)^2 + (beta*r)^4 /2) */
1073 poly = _fjsp_mul_v2r8(exponent,_fjsp_madd_v2r8(_fjsp_mul_v2r8(ewcljrsq,ewcljrsq),one_half,_fjsp_sub_v2r8(one,ewcljrsq)));
1074 /* f6A = 6 * C6grid * (1 - poly) */
1075 f6A = _fjsp_mul_v2r8(c6grid_00,_fjsp_msub_v2r8(one,poly));
1076 /* f6B = C6grid * exponent * beta^6 */
1077 f6B = _fjsp_mul_v2r8(_fjsp_mul_v2r8(c6grid_00,one_sixth),_fjsp_mul_v2r8(exponent,ewclj6));
1078 /* fvdw = 12*C12/r13 - ((6*C6 - f6A)/r6 + f6B)/r */
1079 fvdw = _fjsp_mul_v2r8(_fjsp_madd_v2r8(_fjsp_msub_v2r8(c12_00,rinvsix,_fjsp_sub_v2r8(c6_00,f6A)),rinvsix,f6B),rinvsq00);
1083 fscal = _fjsp_unpacklo_v2r8(fscal,_fjsp_setzero_v2r8());
1085 /* Update vectorial force */
1086 fix0 = _fjsp_madd_v2r8(dx00,fscal,fix0);
1087 fiy0 = _fjsp_madd_v2r8(dy00,fscal,fiy0);
1088 fiz0 = _fjsp_madd_v2r8(dz00,fscal,fiz0);
1090 fjx0 = _fjsp_madd_v2r8(dx00,fscal,fjx0);
1091 fjy0 = _fjsp_madd_v2r8(dy00,fscal,fjy0);
1092 fjz0 = _fjsp_madd_v2r8(dz00,fscal,fjz0);
1094 /**************************
1095 * CALCULATE INTERACTIONS *
1096 **************************/
1098 r10 = _fjsp_mul_v2r8(rsq10,rinv10);
1100 /* Compute parameters for interactions between i and j atoms */
1101 qq10 = _fjsp_mul_v2r8(iq1,jq0);
1103 /* EWALD ELECTROSTATICS */
1105 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1106 ewrt = _fjsp_mul_v2r8(r10,ewtabscale);
1107 itab_tmp = _fjsp_dtox_v2r8(ewrt);
1108 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
1109 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
1111 gmx_fjsp_load_1pair_swizzle_v2r8(ewtab+ewconv.i[0],&ewtabF,&ewtabFn);
1112 felec = _fjsp_madd_v2r8(eweps,ewtabFn,_fjsp_nmsub_v2r8(eweps,ewtabF,ewtabF));
1113 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq10,rinv10),_fjsp_sub_v2r8(rinvsq10,felec));
1117 fscal = _fjsp_unpacklo_v2r8(fscal,_fjsp_setzero_v2r8());
1119 /* Update vectorial force */
1120 fix1 = _fjsp_madd_v2r8(dx10,fscal,fix1);
1121 fiy1 = _fjsp_madd_v2r8(dy10,fscal,fiy1);
1122 fiz1 = _fjsp_madd_v2r8(dz10,fscal,fiz1);
1124 fjx0 = _fjsp_madd_v2r8(dx10,fscal,fjx0);
1125 fjy0 = _fjsp_madd_v2r8(dy10,fscal,fjy0);
1126 fjz0 = _fjsp_madd_v2r8(dz10,fscal,fjz0);
1128 /**************************
1129 * CALCULATE INTERACTIONS *
1130 **************************/
1132 r20 = _fjsp_mul_v2r8(rsq20,rinv20);
1134 /* Compute parameters for interactions between i and j atoms */
1135 qq20 = _fjsp_mul_v2r8(iq2,jq0);
1137 /* EWALD ELECTROSTATICS */
1139 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1140 ewrt = _fjsp_mul_v2r8(r20,ewtabscale);
1141 itab_tmp = _fjsp_dtox_v2r8(ewrt);
1142 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
1143 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
1145 gmx_fjsp_load_1pair_swizzle_v2r8(ewtab+ewconv.i[0],&ewtabF,&ewtabFn);
1146 felec = _fjsp_madd_v2r8(eweps,ewtabFn,_fjsp_nmsub_v2r8(eweps,ewtabF,ewtabF));
1147 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq20,rinv20),_fjsp_sub_v2r8(rinvsq20,felec));
1151 fscal = _fjsp_unpacklo_v2r8(fscal,_fjsp_setzero_v2r8());
1153 /* Update vectorial force */
1154 fix2 = _fjsp_madd_v2r8(dx20,fscal,fix2);
1155 fiy2 = _fjsp_madd_v2r8(dy20,fscal,fiy2);
1156 fiz2 = _fjsp_madd_v2r8(dz20,fscal,fiz2);
1158 fjx0 = _fjsp_madd_v2r8(dx20,fscal,fjx0);
1159 fjy0 = _fjsp_madd_v2r8(dy20,fscal,fjy0);
1160 fjz0 = _fjsp_madd_v2r8(dz20,fscal,fjz0);
1162 /**************************
1163 * CALCULATE INTERACTIONS *
1164 **************************/
1166 r30 = _fjsp_mul_v2r8(rsq30,rinv30);
1168 /* Compute parameters for interactions between i and j atoms */
1169 qq30 = _fjsp_mul_v2r8(iq3,jq0);
1171 /* EWALD ELECTROSTATICS */
1173 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1174 ewrt = _fjsp_mul_v2r8(r30,ewtabscale);
1175 itab_tmp = _fjsp_dtox_v2r8(ewrt);
1176 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
1177 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
1179 gmx_fjsp_load_1pair_swizzle_v2r8(ewtab+ewconv.i[0],&ewtabF,&ewtabFn);
1180 felec = _fjsp_madd_v2r8(eweps,ewtabFn,_fjsp_nmsub_v2r8(eweps,ewtabF,ewtabF));
1181 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq30,rinv30),_fjsp_sub_v2r8(rinvsq30,felec));
1185 fscal = _fjsp_unpacklo_v2r8(fscal,_fjsp_setzero_v2r8());
1187 /* Update vectorial force */
1188 fix3 = _fjsp_madd_v2r8(dx30,fscal,fix3);
1189 fiy3 = _fjsp_madd_v2r8(dy30,fscal,fiy3);
1190 fiz3 = _fjsp_madd_v2r8(dz30,fscal,fiz3);
1192 fjx0 = _fjsp_madd_v2r8(dx30,fscal,fjx0);
1193 fjy0 = _fjsp_madd_v2r8(dy30,fscal,fjy0);
1194 fjz0 = _fjsp_madd_v2r8(dz30,fscal,fjz0);
1196 gmx_fjsp_decrement_1rvec_1ptr_swizzle_v2r8(f+j_coord_offsetA,fjx0,fjy0,fjz0);
1198 /* Inner loop uses 168 flops */
1201 /* End of innermost loop */
1203 gmx_fjsp_update_iforce_4atom_swizzle_v2r8(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
1204 f+i_coord_offset,fshift+i_shift_offset);
1206 /* Increment number of inner iterations */
1207 inneriter += j_index_end - j_index_start;
1209 /* Outer loop uses 24 flops */
1212 /* Increment number of outer iterations */
1215 /* Update outer/inner flops */
1217 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W4_F,outeriter*24 + inneriter*168);