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36 * Note: this file was generated by the GROMACS sparc64_hpc_ace_double kernel generator.
44 #include "../nb_kernel.h"
45 #include "gromacs/gmxlib/nrnb.h"
47 #include "kernelutil_sparc64_hpc_ace_double.h"
50 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwLJEw_GeomW4P1_VF_sparc64_hpc_ace_double
51 * Electrostatics interaction: Ewald
52 * VdW interaction: LJEwald
53 * Geometry: Water4-Particle
54 * Calculate force/pot: PotentialAndForce
57 nb_kernel_ElecEw_VdwLJEw_GeomW4P1_VF_sparc64_hpc_ace_double
58 (t_nblist * gmx_restrict nlist,
59 rvec * gmx_restrict xx,
60 rvec * gmx_restrict ff,
61 struct t_forcerec * gmx_restrict fr,
62 t_mdatoms * gmx_restrict mdatoms,
63 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
64 t_nrnb * gmx_restrict nrnb)
66 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
67 * just 0 for non-waters.
68 * Suffixes A,B refer to j loop unrolling done with double precision SIMD, e.g. for the two different
69 * jnr indices corresponding to data put in the four positions in the SIMD register.
71 int i_shift_offset,i_coord_offset,outeriter,inneriter;
72 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
74 int j_coord_offsetA,j_coord_offsetB;
75 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
77 real *shiftvec,*fshift,*x,*f;
78 _fjsp_v2r8 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
80 _fjsp_v2r8 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
82 _fjsp_v2r8 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
84 _fjsp_v2r8 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
86 _fjsp_v2r8 ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
87 int vdwjidx0A,vdwjidx0B;
88 _fjsp_v2r8 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
89 _fjsp_v2r8 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
90 _fjsp_v2r8 dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
91 _fjsp_v2r8 dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
92 _fjsp_v2r8 dx30,dy30,dz30,rsq30,rinv30,rinvsq30,r30,qq30,c6_30,c12_30;
93 _fjsp_v2r8 velec,felec,velecsum,facel,crf,krf,krf2;
96 _fjsp_v2r8 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
99 _fjsp_v2r8 one_sixth = gmx_fjsp_set1_v2r8(1.0/6.0);
100 _fjsp_v2r8 one_twelfth = gmx_fjsp_set1_v2r8(1.0/12.0);
101 _fjsp_v2r8 c6grid_00;
102 _fjsp_v2r8 c6grid_10;
103 _fjsp_v2r8 c6grid_20;
104 _fjsp_v2r8 c6grid_30;
106 _fjsp_v2r8 ewclj,ewclj2,ewclj6,ewcljrsq,poly,exponent,f6A,f6B,sh_lj_ewald;
107 _fjsp_v2r8 one_half = gmx_fjsp_set1_v2r8(0.5);
108 _fjsp_v2r8 minus_one = gmx_fjsp_set1_v2r8(-1.0);
109 _fjsp_v2r8 ewtabscale,eweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
112 _fjsp_v2r8 dummy_mask,cutoff_mask;
113 _fjsp_v2r8 one = gmx_fjsp_set1_v2r8(1.0);
114 _fjsp_v2r8 two = gmx_fjsp_set1_v2r8(2.0);
115 union { _fjsp_v2r8 simd; long long int i[2]; } vfconv,gbconv,ewconv;
122 jindex = nlist->jindex;
124 shiftidx = nlist->shift;
126 shiftvec = fr->shift_vec[0];
127 fshift = fr->fshift[0];
128 facel = gmx_fjsp_set1_v2r8(fr->ic->epsfac);
129 charge = mdatoms->chargeA;
130 nvdwtype = fr->ntype;
132 vdwtype = mdatoms->typeA;
133 vdwgridparam = fr->ljpme_c6grid;
134 sh_lj_ewald = gmx_fjsp_set1_v2r8(fr->ic->sh_lj_ewald);
135 ewclj = gmx_fjsp_set1_v2r8(fr->ic->ewaldcoeff_lj);
136 ewclj2 = _fjsp_mul_v2r8(minus_one,_fjsp_mul_v2r8(ewclj,ewclj));
138 sh_ewald = gmx_fjsp_set1_v2r8(fr->ic->sh_ewald);
139 ewtab = fr->ic->tabq_coul_FDV0;
140 ewtabscale = gmx_fjsp_set1_v2r8(fr->ic->tabq_scale);
141 ewtabhalfspace = gmx_fjsp_set1_v2r8(0.5/fr->ic->tabq_scale);
143 /* Setup water-specific parameters */
144 inr = nlist->iinr[0];
145 iq1 = _fjsp_mul_v2r8(facel,gmx_fjsp_set1_v2r8(charge[inr+1]));
146 iq2 = _fjsp_mul_v2r8(facel,gmx_fjsp_set1_v2r8(charge[inr+2]));
147 iq3 = _fjsp_mul_v2r8(facel,gmx_fjsp_set1_v2r8(charge[inr+3]));
148 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
150 /* Avoid stupid compiler warnings */
158 /* Start outer loop over neighborlists */
159 for(iidx=0; iidx<nri; iidx++)
161 /* Load shift vector for this list */
162 i_shift_offset = DIM*shiftidx[iidx];
164 /* Load limits for loop over neighbors */
165 j_index_start = jindex[iidx];
166 j_index_end = jindex[iidx+1];
168 /* Get outer coordinate index */
170 i_coord_offset = DIM*inr;
172 /* Load i particle coords and add shift vector */
173 gmx_fjsp_load_shift_and_4rvec_broadcast_v2r8(shiftvec+i_shift_offset,x+i_coord_offset,
174 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
176 fix0 = _fjsp_setzero_v2r8();
177 fiy0 = _fjsp_setzero_v2r8();
178 fiz0 = _fjsp_setzero_v2r8();
179 fix1 = _fjsp_setzero_v2r8();
180 fiy1 = _fjsp_setzero_v2r8();
181 fiz1 = _fjsp_setzero_v2r8();
182 fix2 = _fjsp_setzero_v2r8();
183 fiy2 = _fjsp_setzero_v2r8();
184 fiz2 = _fjsp_setzero_v2r8();
185 fix3 = _fjsp_setzero_v2r8();
186 fiy3 = _fjsp_setzero_v2r8();
187 fiz3 = _fjsp_setzero_v2r8();
189 /* Reset potential sums */
190 velecsum = _fjsp_setzero_v2r8();
191 vvdwsum = _fjsp_setzero_v2r8();
193 /* Start inner kernel loop */
194 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
197 /* Get j neighbor index, and coordinate index */
200 j_coord_offsetA = DIM*jnrA;
201 j_coord_offsetB = DIM*jnrB;
203 /* load j atom coordinates */
204 gmx_fjsp_load_1rvec_2ptr_swizzle_v2r8(x+j_coord_offsetA,x+j_coord_offsetB,
207 /* Calculate displacement vector */
208 dx00 = _fjsp_sub_v2r8(ix0,jx0);
209 dy00 = _fjsp_sub_v2r8(iy0,jy0);
210 dz00 = _fjsp_sub_v2r8(iz0,jz0);
211 dx10 = _fjsp_sub_v2r8(ix1,jx0);
212 dy10 = _fjsp_sub_v2r8(iy1,jy0);
213 dz10 = _fjsp_sub_v2r8(iz1,jz0);
214 dx20 = _fjsp_sub_v2r8(ix2,jx0);
215 dy20 = _fjsp_sub_v2r8(iy2,jy0);
216 dz20 = _fjsp_sub_v2r8(iz2,jz0);
217 dx30 = _fjsp_sub_v2r8(ix3,jx0);
218 dy30 = _fjsp_sub_v2r8(iy3,jy0);
219 dz30 = _fjsp_sub_v2r8(iz3,jz0);
221 /* Calculate squared distance and things based on it */
222 rsq00 = gmx_fjsp_calc_rsq_v2r8(dx00,dy00,dz00);
223 rsq10 = gmx_fjsp_calc_rsq_v2r8(dx10,dy10,dz10);
224 rsq20 = gmx_fjsp_calc_rsq_v2r8(dx20,dy20,dz20);
225 rsq30 = gmx_fjsp_calc_rsq_v2r8(dx30,dy30,dz30);
227 rinv00 = gmx_fjsp_invsqrt_v2r8(rsq00);
228 rinv10 = gmx_fjsp_invsqrt_v2r8(rsq10);
229 rinv20 = gmx_fjsp_invsqrt_v2r8(rsq20);
230 rinv30 = gmx_fjsp_invsqrt_v2r8(rsq30);
232 rinvsq00 = _fjsp_mul_v2r8(rinv00,rinv00);
233 rinvsq10 = _fjsp_mul_v2r8(rinv10,rinv10);
234 rinvsq20 = _fjsp_mul_v2r8(rinv20,rinv20);
235 rinvsq30 = _fjsp_mul_v2r8(rinv30,rinv30);
237 /* Load parameters for j particles */
238 jq0 = gmx_fjsp_load_2real_swizzle_v2r8(charge+jnrA+0,charge+jnrB+0);
239 vdwjidx0A = 2*vdwtype[jnrA+0];
240 vdwjidx0B = 2*vdwtype[jnrB+0];
242 fjx0 = _fjsp_setzero_v2r8();
243 fjy0 = _fjsp_setzero_v2r8();
244 fjz0 = _fjsp_setzero_v2r8();
246 /**************************
247 * CALCULATE INTERACTIONS *
248 **************************/
250 r00 = _fjsp_mul_v2r8(rsq00,rinv00);
252 /* Compute parameters for interactions between i and j atoms */
253 gmx_fjsp_load_2pair_swizzle_v2r8(vdwparam+vdwioffset0+vdwjidx0A,
254 vdwparam+vdwioffset0+vdwjidx0B,&c6_00,&c12_00);
256 c6grid_00 = gmx_fjsp_load_2real_swizzle_v2r8(vdwgridparam+vdwioffset0+vdwjidx0A,
257 vdwgridparam+vdwioffset0+vdwjidx0B);
259 /* Analytical LJ-PME */
260 rinvsix = _fjsp_mul_v2r8(_fjsp_mul_v2r8(rinvsq00,rinvsq00),rinvsq00);
261 ewcljrsq = _fjsp_mul_v2r8(ewclj2,rsq00);
262 ewclj6 = _fjsp_mul_v2r8(ewclj2,_fjsp_mul_v2r8(ewclj2,ewclj2));
263 exponent = gmx_simd_exp_d(ewcljrsq);
264 /* poly = exp(-(beta*r)^2) * (1 + (beta*r)^2 + (beta*r)^4 /2) */
265 poly = _fjsp_mul_v2r8(exponent,_fjsp_madd_v2r8(_fjsp_mul_v2r8(ewcljrsq,ewcljrsq),one_half,_fjsp_sub_v2r8(one,ewcljrsq)));
266 /* vvdw6 = [C6 - C6grid * (1-poly)]/r6 */
267 vvdw6 = _fjsp_mul_v2r8(_fjsp_madd_v2r8(c6grid_00,_fjsp_sub_v2r8(poly,one),c6_00),rinvsix);
268 vvdw12 = _fjsp_mul_v2r8(c12_00,_fjsp_mul_v2r8(rinvsix,rinvsix));
269 vvdw = _fjsp_msub_v2r8(vvdw12,one_twelfth,_fjsp_mul_v2r8(vvdw6,one_sixth));
270 /* fvdw = vvdw12/r - (vvdw6/r + (C6grid * exponent * beta^6)/r) */
271 fvdw = _fjsp_mul_v2r8(_fjsp_add_v2r8(vvdw12,_fjsp_msub_v2r8(_fjsp_mul_v2r8(c6grid_00,one_sixth),_fjsp_mul_v2r8(exponent,ewclj6),vvdw6)),rinvsq00);
273 /* Update potential sum for this i atom from the interaction with this j atom. */
274 vvdwsum = _fjsp_add_v2r8(vvdwsum,vvdw);
278 /* Update vectorial force */
279 fix0 = _fjsp_madd_v2r8(dx00,fscal,fix0);
280 fiy0 = _fjsp_madd_v2r8(dy00,fscal,fiy0);
281 fiz0 = _fjsp_madd_v2r8(dz00,fscal,fiz0);
283 fjx0 = _fjsp_madd_v2r8(dx00,fscal,fjx0);
284 fjy0 = _fjsp_madd_v2r8(dy00,fscal,fjy0);
285 fjz0 = _fjsp_madd_v2r8(dz00,fscal,fjz0);
287 /**************************
288 * CALCULATE INTERACTIONS *
289 **************************/
291 r10 = _fjsp_mul_v2r8(rsq10,rinv10);
293 /* Compute parameters for interactions between i and j atoms */
294 qq10 = _fjsp_mul_v2r8(iq1,jq0);
296 /* EWALD ELECTROSTATICS */
298 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
299 ewrt = _fjsp_mul_v2r8(r10,ewtabscale);
300 itab_tmp = _fjsp_dtox_v2r8(ewrt);
301 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
302 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
304 ewtabF = _fjsp_load_v2r8( ewtab + 4*ewconv.i[0] );
305 ewtabD = _fjsp_load_v2r8( ewtab + 4*ewconv.i[1] );
306 GMX_FJSP_TRANSPOSE2_V2R8(ewtabF,ewtabD);
307 ewtabV = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[0] +2);
308 ewtabFn = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[1] +2);
309 GMX_FJSP_TRANSPOSE2_V2R8(ewtabV,ewtabFn);
310 felec = _fjsp_madd_v2r8(eweps,ewtabD,ewtabF);
311 velec = _fjsp_nmsub_v2r8(_fjsp_mul_v2r8(ewtabhalfspace,eweps) ,_fjsp_add_v2r8(ewtabF,felec), ewtabV);
312 velec = _fjsp_mul_v2r8(qq10,_fjsp_sub_v2r8(rinv10,velec));
313 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq10,rinv10),_fjsp_sub_v2r8(rinvsq10,felec));
315 /* Update potential sum for this i atom from the interaction with this j atom. */
316 velecsum = _fjsp_add_v2r8(velecsum,velec);
320 /* Update vectorial force */
321 fix1 = _fjsp_madd_v2r8(dx10,fscal,fix1);
322 fiy1 = _fjsp_madd_v2r8(dy10,fscal,fiy1);
323 fiz1 = _fjsp_madd_v2r8(dz10,fscal,fiz1);
325 fjx0 = _fjsp_madd_v2r8(dx10,fscal,fjx0);
326 fjy0 = _fjsp_madd_v2r8(dy10,fscal,fjy0);
327 fjz0 = _fjsp_madd_v2r8(dz10,fscal,fjz0);
329 /**************************
330 * CALCULATE INTERACTIONS *
331 **************************/
333 r20 = _fjsp_mul_v2r8(rsq20,rinv20);
335 /* Compute parameters for interactions between i and j atoms */
336 qq20 = _fjsp_mul_v2r8(iq2,jq0);
338 /* EWALD ELECTROSTATICS */
340 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
341 ewrt = _fjsp_mul_v2r8(r20,ewtabscale);
342 itab_tmp = _fjsp_dtox_v2r8(ewrt);
343 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
344 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
346 ewtabF = _fjsp_load_v2r8( ewtab + 4*ewconv.i[0] );
347 ewtabD = _fjsp_load_v2r8( ewtab + 4*ewconv.i[1] );
348 GMX_FJSP_TRANSPOSE2_V2R8(ewtabF,ewtabD);
349 ewtabV = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[0] +2);
350 ewtabFn = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[1] +2);
351 GMX_FJSP_TRANSPOSE2_V2R8(ewtabV,ewtabFn);
352 felec = _fjsp_madd_v2r8(eweps,ewtabD,ewtabF);
353 velec = _fjsp_nmsub_v2r8(_fjsp_mul_v2r8(ewtabhalfspace,eweps) ,_fjsp_add_v2r8(ewtabF,felec), ewtabV);
354 velec = _fjsp_mul_v2r8(qq20,_fjsp_sub_v2r8(rinv20,velec));
355 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq20,rinv20),_fjsp_sub_v2r8(rinvsq20,felec));
357 /* Update potential sum for this i atom from the interaction with this j atom. */
358 velecsum = _fjsp_add_v2r8(velecsum,velec);
362 /* Update vectorial force */
363 fix2 = _fjsp_madd_v2r8(dx20,fscal,fix2);
364 fiy2 = _fjsp_madd_v2r8(dy20,fscal,fiy2);
365 fiz2 = _fjsp_madd_v2r8(dz20,fscal,fiz2);
367 fjx0 = _fjsp_madd_v2r8(dx20,fscal,fjx0);
368 fjy0 = _fjsp_madd_v2r8(dy20,fscal,fjy0);
369 fjz0 = _fjsp_madd_v2r8(dz20,fscal,fjz0);
371 /**************************
372 * CALCULATE INTERACTIONS *
373 **************************/
375 r30 = _fjsp_mul_v2r8(rsq30,rinv30);
377 /* Compute parameters for interactions between i and j atoms */
378 qq30 = _fjsp_mul_v2r8(iq3,jq0);
380 /* EWALD ELECTROSTATICS */
382 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
383 ewrt = _fjsp_mul_v2r8(r30,ewtabscale);
384 itab_tmp = _fjsp_dtox_v2r8(ewrt);
385 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
386 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
388 ewtabF = _fjsp_load_v2r8( ewtab + 4*ewconv.i[0] );
389 ewtabD = _fjsp_load_v2r8( ewtab + 4*ewconv.i[1] );
390 GMX_FJSP_TRANSPOSE2_V2R8(ewtabF,ewtabD);
391 ewtabV = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[0] +2);
392 ewtabFn = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[1] +2);
393 GMX_FJSP_TRANSPOSE2_V2R8(ewtabV,ewtabFn);
394 felec = _fjsp_madd_v2r8(eweps,ewtabD,ewtabF);
395 velec = _fjsp_nmsub_v2r8(_fjsp_mul_v2r8(ewtabhalfspace,eweps) ,_fjsp_add_v2r8(ewtabF,felec), ewtabV);
396 velec = _fjsp_mul_v2r8(qq30,_fjsp_sub_v2r8(rinv30,velec));
397 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq30,rinv30),_fjsp_sub_v2r8(rinvsq30,felec));
399 /* Update potential sum for this i atom from the interaction with this j atom. */
400 velecsum = _fjsp_add_v2r8(velecsum,velec);
404 /* Update vectorial force */
405 fix3 = _fjsp_madd_v2r8(dx30,fscal,fix3);
406 fiy3 = _fjsp_madd_v2r8(dy30,fscal,fiy3);
407 fiz3 = _fjsp_madd_v2r8(dz30,fscal,fiz3);
409 fjx0 = _fjsp_madd_v2r8(dx30,fscal,fjx0);
410 fjy0 = _fjsp_madd_v2r8(dy30,fscal,fjy0);
411 fjz0 = _fjsp_madd_v2r8(dz30,fscal,fjz0);
413 gmx_fjsp_decrement_1rvec_2ptr_swizzle_v2r8(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0);
415 /* Inner loop uses 185 flops */
422 j_coord_offsetA = DIM*jnrA;
424 /* load j atom coordinates */
425 gmx_fjsp_load_1rvec_1ptr_swizzle_v2r8(x+j_coord_offsetA,
428 /* Calculate displacement vector */
429 dx00 = _fjsp_sub_v2r8(ix0,jx0);
430 dy00 = _fjsp_sub_v2r8(iy0,jy0);
431 dz00 = _fjsp_sub_v2r8(iz0,jz0);
432 dx10 = _fjsp_sub_v2r8(ix1,jx0);
433 dy10 = _fjsp_sub_v2r8(iy1,jy0);
434 dz10 = _fjsp_sub_v2r8(iz1,jz0);
435 dx20 = _fjsp_sub_v2r8(ix2,jx0);
436 dy20 = _fjsp_sub_v2r8(iy2,jy0);
437 dz20 = _fjsp_sub_v2r8(iz2,jz0);
438 dx30 = _fjsp_sub_v2r8(ix3,jx0);
439 dy30 = _fjsp_sub_v2r8(iy3,jy0);
440 dz30 = _fjsp_sub_v2r8(iz3,jz0);
442 /* Calculate squared distance and things based on it */
443 rsq00 = gmx_fjsp_calc_rsq_v2r8(dx00,dy00,dz00);
444 rsq10 = gmx_fjsp_calc_rsq_v2r8(dx10,dy10,dz10);
445 rsq20 = gmx_fjsp_calc_rsq_v2r8(dx20,dy20,dz20);
446 rsq30 = gmx_fjsp_calc_rsq_v2r8(dx30,dy30,dz30);
448 rinv00 = gmx_fjsp_invsqrt_v2r8(rsq00);
449 rinv10 = gmx_fjsp_invsqrt_v2r8(rsq10);
450 rinv20 = gmx_fjsp_invsqrt_v2r8(rsq20);
451 rinv30 = gmx_fjsp_invsqrt_v2r8(rsq30);
453 rinvsq00 = _fjsp_mul_v2r8(rinv00,rinv00);
454 rinvsq10 = _fjsp_mul_v2r8(rinv10,rinv10);
455 rinvsq20 = _fjsp_mul_v2r8(rinv20,rinv20);
456 rinvsq30 = _fjsp_mul_v2r8(rinv30,rinv30);
458 /* Load parameters for j particles */
459 jq0 = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(),charge+jnrA+0);
460 vdwjidx0A = 2*vdwtype[jnrA+0];
462 fjx0 = _fjsp_setzero_v2r8();
463 fjy0 = _fjsp_setzero_v2r8();
464 fjz0 = _fjsp_setzero_v2r8();
466 /**************************
467 * CALCULATE INTERACTIONS *
468 **************************/
470 r00 = _fjsp_mul_v2r8(rsq00,rinv00);
472 /* Compute parameters for interactions between i and j atoms */
473 gmx_fjsp_load_2pair_swizzle_v2r8(vdwparam+vdwioffset0+vdwjidx0A,
474 vdwparam+vdwioffset0+vdwjidx0B,&c6_00,&c12_00);
476 c6grid_00 = gmx_fjsp_load_2real_swizzle_v2r8(vdwgridparam+vdwioffset0+vdwjidx0A,
477 vdwgridparam+vdwioffset0+vdwjidx0B);
479 /* Analytical LJ-PME */
480 rinvsix = _fjsp_mul_v2r8(_fjsp_mul_v2r8(rinvsq00,rinvsq00),rinvsq00);
481 ewcljrsq = _fjsp_mul_v2r8(ewclj2,rsq00);
482 ewclj6 = _fjsp_mul_v2r8(ewclj2,_fjsp_mul_v2r8(ewclj2,ewclj2));
483 exponent = gmx_simd_exp_d(ewcljrsq);
484 /* poly = exp(-(beta*r)^2) * (1 + (beta*r)^2 + (beta*r)^4 /2) */
485 poly = _fjsp_mul_v2r8(exponent,_fjsp_madd_v2r8(_fjsp_mul_v2r8(ewcljrsq,ewcljrsq),one_half,_fjsp_sub_v2r8(one,ewcljrsq)));
486 /* vvdw6 = [C6 - C6grid * (1-poly)]/r6 */
487 vvdw6 = _fjsp_mul_v2r8(_fjsp_madd_v2r8(c6grid_00,_fjsp_sub_v2r8(poly,one),c6_00),rinvsix);
488 vvdw12 = _fjsp_mul_v2r8(c12_00,_fjsp_mul_v2r8(rinvsix,rinvsix));
489 vvdw = _fjsp_msub_v2r8(vvdw12,one_twelfth,_fjsp_mul_v2r8(vvdw6,one_sixth));
490 /* fvdw = vvdw12/r - (vvdw6/r + (C6grid * exponent * beta^6)/r) */
491 fvdw = _fjsp_mul_v2r8(_fjsp_add_v2r8(vvdw12,_fjsp_msub_v2r8(_fjsp_mul_v2r8(c6grid_00,one_sixth),_fjsp_mul_v2r8(exponent,ewclj6),vvdw6)),rinvsq00);
493 /* Update potential sum for this i atom from the interaction with this j atom. */
494 vvdw = _fjsp_unpacklo_v2r8(vvdw,_fjsp_setzero_v2r8());
495 vvdwsum = _fjsp_add_v2r8(vvdwsum,vvdw);
499 fscal = _fjsp_unpacklo_v2r8(fscal,_fjsp_setzero_v2r8());
501 /* Update vectorial force */
502 fix0 = _fjsp_madd_v2r8(dx00,fscal,fix0);
503 fiy0 = _fjsp_madd_v2r8(dy00,fscal,fiy0);
504 fiz0 = _fjsp_madd_v2r8(dz00,fscal,fiz0);
506 fjx0 = _fjsp_madd_v2r8(dx00,fscal,fjx0);
507 fjy0 = _fjsp_madd_v2r8(dy00,fscal,fjy0);
508 fjz0 = _fjsp_madd_v2r8(dz00,fscal,fjz0);
510 /**************************
511 * CALCULATE INTERACTIONS *
512 **************************/
514 r10 = _fjsp_mul_v2r8(rsq10,rinv10);
516 /* Compute parameters for interactions between i and j atoms */
517 qq10 = _fjsp_mul_v2r8(iq1,jq0);
519 /* EWALD ELECTROSTATICS */
521 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
522 ewrt = _fjsp_mul_v2r8(r10,ewtabscale);
523 itab_tmp = _fjsp_dtox_v2r8(ewrt);
524 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
525 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
527 ewtabF = _fjsp_load_v2r8( ewtab + 4*ewconv.i[0] );
528 ewtabD = _fjsp_setzero_v2r8();
529 GMX_FJSP_TRANSPOSE2_V2R8(ewtabF,ewtabD);
530 ewtabV = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[0] +2);
531 ewtabFn = _fjsp_setzero_v2r8();
532 GMX_FJSP_TRANSPOSE2_V2R8(ewtabV,ewtabFn);
533 felec = _fjsp_madd_v2r8(eweps,ewtabD,ewtabF);
534 velec = _fjsp_nmsub_v2r8(_fjsp_mul_v2r8(ewtabhalfspace,eweps) ,_fjsp_add_v2r8(ewtabF,felec), ewtabV);
535 velec = _fjsp_mul_v2r8(qq10,_fjsp_sub_v2r8(rinv10,velec));
536 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq10,rinv10),_fjsp_sub_v2r8(rinvsq10,felec));
538 /* Update potential sum for this i atom from the interaction with this j atom. */
539 velec = _fjsp_unpacklo_v2r8(velec,_fjsp_setzero_v2r8());
540 velecsum = _fjsp_add_v2r8(velecsum,velec);
544 fscal = _fjsp_unpacklo_v2r8(fscal,_fjsp_setzero_v2r8());
546 /* Update vectorial force */
547 fix1 = _fjsp_madd_v2r8(dx10,fscal,fix1);
548 fiy1 = _fjsp_madd_v2r8(dy10,fscal,fiy1);
549 fiz1 = _fjsp_madd_v2r8(dz10,fscal,fiz1);
551 fjx0 = _fjsp_madd_v2r8(dx10,fscal,fjx0);
552 fjy0 = _fjsp_madd_v2r8(dy10,fscal,fjy0);
553 fjz0 = _fjsp_madd_v2r8(dz10,fscal,fjz0);
555 /**************************
556 * CALCULATE INTERACTIONS *
557 **************************/
559 r20 = _fjsp_mul_v2r8(rsq20,rinv20);
561 /* Compute parameters for interactions between i and j atoms */
562 qq20 = _fjsp_mul_v2r8(iq2,jq0);
564 /* EWALD ELECTROSTATICS */
566 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
567 ewrt = _fjsp_mul_v2r8(r20,ewtabscale);
568 itab_tmp = _fjsp_dtox_v2r8(ewrt);
569 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
570 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
572 ewtabF = _fjsp_load_v2r8( ewtab + 4*ewconv.i[0] );
573 ewtabD = _fjsp_setzero_v2r8();
574 GMX_FJSP_TRANSPOSE2_V2R8(ewtabF,ewtabD);
575 ewtabV = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[0] +2);
576 ewtabFn = _fjsp_setzero_v2r8();
577 GMX_FJSP_TRANSPOSE2_V2R8(ewtabV,ewtabFn);
578 felec = _fjsp_madd_v2r8(eweps,ewtabD,ewtabF);
579 velec = _fjsp_nmsub_v2r8(_fjsp_mul_v2r8(ewtabhalfspace,eweps) ,_fjsp_add_v2r8(ewtabF,felec), ewtabV);
580 velec = _fjsp_mul_v2r8(qq20,_fjsp_sub_v2r8(rinv20,velec));
581 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq20,rinv20),_fjsp_sub_v2r8(rinvsq20,felec));
583 /* Update potential sum for this i atom from the interaction with this j atom. */
584 velec = _fjsp_unpacklo_v2r8(velec,_fjsp_setzero_v2r8());
585 velecsum = _fjsp_add_v2r8(velecsum,velec);
589 fscal = _fjsp_unpacklo_v2r8(fscal,_fjsp_setzero_v2r8());
591 /* Update vectorial force */
592 fix2 = _fjsp_madd_v2r8(dx20,fscal,fix2);
593 fiy2 = _fjsp_madd_v2r8(dy20,fscal,fiy2);
594 fiz2 = _fjsp_madd_v2r8(dz20,fscal,fiz2);
596 fjx0 = _fjsp_madd_v2r8(dx20,fscal,fjx0);
597 fjy0 = _fjsp_madd_v2r8(dy20,fscal,fjy0);
598 fjz0 = _fjsp_madd_v2r8(dz20,fscal,fjz0);
600 /**************************
601 * CALCULATE INTERACTIONS *
602 **************************/
604 r30 = _fjsp_mul_v2r8(rsq30,rinv30);
606 /* Compute parameters for interactions between i and j atoms */
607 qq30 = _fjsp_mul_v2r8(iq3,jq0);
609 /* EWALD ELECTROSTATICS */
611 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
612 ewrt = _fjsp_mul_v2r8(r30,ewtabscale);
613 itab_tmp = _fjsp_dtox_v2r8(ewrt);
614 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
615 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
617 ewtabF = _fjsp_load_v2r8( ewtab + 4*ewconv.i[0] );
618 ewtabD = _fjsp_setzero_v2r8();
619 GMX_FJSP_TRANSPOSE2_V2R8(ewtabF,ewtabD);
620 ewtabV = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(), ewtab + 4*ewconv.i[0] +2);
621 ewtabFn = _fjsp_setzero_v2r8();
622 GMX_FJSP_TRANSPOSE2_V2R8(ewtabV,ewtabFn);
623 felec = _fjsp_madd_v2r8(eweps,ewtabD,ewtabF);
624 velec = _fjsp_nmsub_v2r8(_fjsp_mul_v2r8(ewtabhalfspace,eweps) ,_fjsp_add_v2r8(ewtabF,felec), ewtabV);
625 velec = _fjsp_mul_v2r8(qq30,_fjsp_sub_v2r8(rinv30,velec));
626 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq30,rinv30),_fjsp_sub_v2r8(rinvsq30,felec));
628 /* Update potential sum for this i atom from the interaction with this j atom. */
629 velec = _fjsp_unpacklo_v2r8(velec,_fjsp_setzero_v2r8());
630 velecsum = _fjsp_add_v2r8(velecsum,velec);
634 fscal = _fjsp_unpacklo_v2r8(fscal,_fjsp_setzero_v2r8());
636 /* Update vectorial force */
637 fix3 = _fjsp_madd_v2r8(dx30,fscal,fix3);
638 fiy3 = _fjsp_madd_v2r8(dy30,fscal,fiy3);
639 fiz3 = _fjsp_madd_v2r8(dz30,fscal,fiz3);
641 fjx0 = _fjsp_madd_v2r8(dx30,fscal,fjx0);
642 fjy0 = _fjsp_madd_v2r8(dy30,fscal,fjy0);
643 fjz0 = _fjsp_madd_v2r8(dz30,fscal,fjz0);
645 gmx_fjsp_decrement_1rvec_1ptr_swizzle_v2r8(f+j_coord_offsetA,fjx0,fjy0,fjz0);
647 /* Inner loop uses 185 flops */
650 /* End of innermost loop */
652 gmx_fjsp_update_iforce_4atom_swizzle_v2r8(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
653 f+i_coord_offset,fshift+i_shift_offset);
656 /* Update potential energies */
657 gmx_fjsp_update_1pot_v2r8(velecsum,kernel_data->energygrp_elec+ggid);
658 gmx_fjsp_update_1pot_v2r8(vvdwsum,kernel_data->energygrp_vdw+ggid);
660 /* Increment number of inner iterations */
661 inneriter += j_index_end - j_index_start;
663 /* Outer loop uses 26 flops */
666 /* Increment number of outer iterations */
669 /* Update outer/inner flops */
671 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W4_VF,outeriter*26 + inneriter*185);
674 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwLJEw_GeomW4P1_F_sparc64_hpc_ace_double
675 * Electrostatics interaction: Ewald
676 * VdW interaction: LJEwald
677 * Geometry: Water4-Particle
678 * Calculate force/pot: Force
681 nb_kernel_ElecEw_VdwLJEw_GeomW4P1_F_sparc64_hpc_ace_double
682 (t_nblist * gmx_restrict nlist,
683 rvec * gmx_restrict xx,
684 rvec * gmx_restrict ff,
685 struct t_forcerec * gmx_restrict fr,
686 t_mdatoms * gmx_restrict mdatoms,
687 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
688 t_nrnb * gmx_restrict nrnb)
690 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
691 * just 0 for non-waters.
692 * Suffixes A,B refer to j loop unrolling done with double precision SIMD, e.g. for the two different
693 * jnr indices corresponding to data put in the four positions in the SIMD register.
695 int i_shift_offset,i_coord_offset,outeriter,inneriter;
696 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
698 int j_coord_offsetA,j_coord_offsetB;
699 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
701 real *shiftvec,*fshift,*x,*f;
702 _fjsp_v2r8 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
704 _fjsp_v2r8 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
706 _fjsp_v2r8 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
708 _fjsp_v2r8 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
710 _fjsp_v2r8 ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
711 int vdwjidx0A,vdwjidx0B;
712 _fjsp_v2r8 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
713 _fjsp_v2r8 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
714 _fjsp_v2r8 dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
715 _fjsp_v2r8 dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
716 _fjsp_v2r8 dx30,dy30,dz30,rsq30,rinv30,rinvsq30,r30,qq30,c6_30,c12_30;
717 _fjsp_v2r8 velec,felec,velecsum,facel,crf,krf,krf2;
720 _fjsp_v2r8 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
723 _fjsp_v2r8 one_sixth = gmx_fjsp_set1_v2r8(1.0/6.0);
724 _fjsp_v2r8 one_twelfth = gmx_fjsp_set1_v2r8(1.0/12.0);
725 _fjsp_v2r8 c6grid_00;
726 _fjsp_v2r8 c6grid_10;
727 _fjsp_v2r8 c6grid_20;
728 _fjsp_v2r8 c6grid_30;
730 _fjsp_v2r8 ewclj,ewclj2,ewclj6,ewcljrsq,poly,exponent,f6A,f6B,sh_lj_ewald;
731 _fjsp_v2r8 one_half = gmx_fjsp_set1_v2r8(0.5);
732 _fjsp_v2r8 minus_one = gmx_fjsp_set1_v2r8(-1.0);
733 _fjsp_v2r8 ewtabscale,eweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
736 _fjsp_v2r8 dummy_mask,cutoff_mask;
737 _fjsp_v2r8 one = gmx_fjsp_set1_v2r8(1.0);
738 _fjsp_v2r8 two = gmx_fjsp_set1_v2r8(2.0);
739 union { _fjsp_v2r8 simd; long long int i[2]; } vfconv,gbconv,ewconv;
746 jindex = nlist->jindex;
748 shiftidx = nlist->shift;
750 shiftvec = fr->shift_vec[0];
751 fshift = fr->fshift[0];
752 facel = gmx_fjsp_set1_v2r8(fr->ic->epsfac);
753 charge = mdatoms->chargeA;
754 nvdwtype = fr->ntype;
756 vdwtype = mdatoms->typeA;
757 vdwgridparam = fr->ljpme_c6grid;
758 sh_lj_ewald = gmx_fjsp_set1_v2r8(fr->ic->sh_lj_ewald);
759 ewclj = gmx_fjsp_set1_v2r8(fr->ic->ewaldcoeff_lj);
760 ewclj2 = _fjsp_mul_v2r8(minus_one,_fjsp_mul_v2r8(ewclj,ewclj));
762 sh_ewald = gmx_fjsp_set1_v2r8(fr->ic->sh_ewald);
763 ewtab = fr->ic->tabq_coul_F;
764 ewtabscale = gmx_fjsp_set1_v2r8(fr->ic->tabq_scale);
765 ewtabhalfspace = gmx_fjsp_set1_v2r8(0.5/fr->ic->tabq_scale);
767 /* Setup water-specific parameters */
768 inr = nlist->iinr[0];
769 iq1 = _fjsp_mul_v2r8(facel,gmx_fjsp_set1_v2r8(charge[inr+1]));
770 iq2 = _fjsp_mul_v2r8(facel,gmx_fjsp_set1_v2r8(charge[inr+2]));
771 iq3 = _fjsp_mul_v2r8(facel,gmx_fjsp_set1_v2r8(charge[inr+3]));
772 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
774 /* Avoid stupid compiler warnings */
782 /* Start outer loop over neighborlists */
783 for(iidx=0; iidx<nri; iidx++)
785 /* Load shift vector for this list */
786 i_shift_offset = DIM*shiftidx[iidx];
788 /* Load limits for loop over neighbors */
789 j_index_start = jindex[iidx];
790 j_index_end = jindex[iidx+1];
792 /* Get outer coordinate index */
794 i_coord_offset = DIM*inr;
796 /* Load i particle coords and add shift vector */
797 gmx_fjsp_load_shift_and_4rvec_broadcast_v2r8(shiftvec+i_shift_offset,x+i_coord_offset,
798 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
800 fix0 = _fjsp_setzero_v2r8();
801 fiy0 = _fjsp_setzero_v2r8();
802 fiz0 = _fjsp_setzero_v2r8();
803 fix1 = _fjsp_setzero_v2r8();
804 fiy1 = _fjsp_setzero_v2r8();
805 fiz1 = _fjsp_setzero_v2r8();
806 fix2 = _fjsp_setzero_v2r8();
807 fiy2 = _fjsp_setzero_v2r8();
808 fiz2 = _fjsp_setzero_v2r8();
809 fix3 = _fjsp_setzero_v2r8();
810 fiy3 = _fjsp_setzero_v2r8();
811 fiz3 = _fjsp_setzero_v2r8();
813 /* Start inner kernel loop */
814 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
817 /* Get j neighbor index, and coordinate index */
820 j_coord_offsetA = DIM*jnrA;
821 j_coord_offsetB = DIM*jnrB;
823 /* load j atom coordinates */
824 gmx_fjsp_load_1rvec_2ptr_swizzle_v2r8(x+j_coord_offsetA,x+j_coord_offsetB,
827 /* Calculate displacement vector */
828 dx00 = _fjsp_sub_v2r8(ix0,jx0);
829 dy00 = _fjsp_sub_v2r8(iy0,jy0);
830 dz00 = _fjsp_sub_v2r8(iz0,jz0);
831 dx10 = _fjsp_sub_v2r8(ix1,jx0);
832 dy10 = _fjsp_sub_v2r8(iy1,jy0);
833 dz10 = _fjsp_sub_v2r8(iz1,jz0);
834 dx20 = _fjsp_sub_v2r8(ix2,jx0);
835 dy20 = _fjsp_sub_v2r8(iy2,jy0);
836 dz20 = _fjsp_sub_v2r8(iz2,jz0);
837 dx30 = _fjsp_sub_v2r8(ix3,jx0);
838 dy30 = _fjsp_sub_v2r8(iy3,jy0);
839 dz30 = _fjsp_sub_v2r8(iz3,jz0);
841 /* Calculate squared distance and things based on it */
842 rsq00 = gmx_fjsp_calc_rsq_v2r8(dx00,dy00,dz00);
843 rsq10 = gmx_fjsp_calc_rsq_v2r8(dx10,dy10,dz10);
844 rsq20 = gmx_fjsp_calc_rsq_v2r8(dx20,dy20,dz20);
845 rsq30 = gmx_fjsp_calc_rsq_v2r8(dx30,dy30,dz30);
847 rinv00 = gmx_fjsp_invsqrt_v2r8(rsq00);
848 rinv10 = gmx_fjsp_invsqrt_v2r8(rsq10);
849 rinv20 = gmx_fjsp_invsqrt_v2r8(rsq20);
850 rinv30 = gmx_fjsp_invsqrt_v2r8(rsq30);
852 rinvsq00 = _fjsp_mul_v2r8(rinv00,rinv00);
853 rinvsq10 = _fjsp_mul_v2r8(rinv10,rinv10);
854 rinvsq20 = _fjsp_mul_v2r8(rinv20,rinv20);
855 rinvsq30 = _fjsp_mul_v2r8(rinv30,rinv30);
857 /* Load parameters for j particles */
858 jq0 = gmx_fjsp_load_2real_swizzle_v2r8(charge+jnrA+0,charge+jnrB+0);
859 vdwjidx0A = 2*vdwtype[jnrA+0];
860 vdwjidx0B = 2*vdwtype[jnrB+0];
862 fjx0 = _fjsp_setzero_v2r8();
863 fjy0 = _fjsp_setzero_v2r8();
864 fjz0 = _fjsp_setzero_v2r8();
866 /**************************
867 * CALCULATE INTERACTIONS *
868 **************************/
870 r00 = _fjsp_mul_v2r8(rsq00,rinv00);
872 /* Compute parameters for interactions between i and j atoms */
873 gmx_fjsp_load_2pair_swizzle_v2r8(vdwparam+vdwioffset0+vdwjidx0A,
874 vdwparam+vdwioffset0+vdwjidx0B,&c6_00,&c12_00);
876 c6grid_00 = gmx_fjsp_load_2real_swizzle_v2r8(vdwgridparam+vdwioffset0+vdwjidx0A,
877 vdwgridparam+vdwioffset0+vdwjidx0B);
879 /* Analytical LJ-PME */
880 rinvsix = _fjsp_mul_v2r8(_fjsp_mul_v2r8(rinvsq00,rinvsq00),rinvsq00);
881 ewcljrsq = _fjsp_mul_v2r8(ewclj2,rsq00);
882 ewclj6 = _fjsp_mul_v2r8(ewclj2,_fjsp_mul_v2r8(ewclj2,ewclj2));
883 exponent = gmx_simd_exp_d(ewcljrsq);
884 /* poly = exp(-(beta*r)^2) * (1 + (beta*r)^2 + (beta*r)^4 /2) */
885 poly = _fjsp_mul_v2r8(exponent,_fjsp_madd_v2r8(_fjsp_mul_v2r8(ewcljrsq,ewcljrsq),one_half,_fjsp_sub_v2r8(one,ewcljrsq)));
886 /* f6A = 6 * C6grid * (1 - poly) */
887 f6A = _fjsp_mul_v2r8(c6grid_00,_fjsp_sub_v2r8(one,poly));
888 /* f6B = C6grid * exponent * beta^6 */
889 f6B = _fjsp_mul_v2r8(_fjsp_mul_v2r8(c6grid_00,one_sixth),_fjsp_mul_v2r8(exponent,ewclj6));
890 /* fvdw = 12*C12/r13 - ((6*C6 - f6A)/r6 + f6B)/r */
891 fvdw = _fjsp_mul_v2r8(_fjsp_madd_v2r8(_fjsp_msub_v2r8(c12_00,rinvsix,_fjsp_sub_v2r8(c6_00,f6A)),rinvsix,f6B),rinvsq00);
895 /* Update vectorial force */
896 fix0 = _fjsp_madd_v2r8(dx00,fscal,fix0);
897 fiy0 = _fjsp_madd_v2r8(dy00,fscal,fiy0);
898 fiz0 = _fjsp_madd_v2r8(dz00,fscal,fiz0);
900 fjx0 = _fjsp_madd_v2r8(dx00,fscal,fjx0);
901 fjy0 = _fjsp_madd_v2r8(dy00,fscal,fjy0);
902 fjz0 = _fjsp_madd_v2r8(dz00,fscal,fjz0);
904 /**************************
905 * CALCULATE INTERACTIONS *
906 **************************/
908 r10 = _fjsp_mul_v2r8(rsq10,rinv10);
910 /* Compute parameters for interactions between i and j atoms */
911 qq10 = _fjsp_mul_v2r8(iq1,jq0);
913 /* EWALD ELECTROSTATICS */
915 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
916 ewrt = _fjsp_mul_v2r8(r10,ewtabscale);
917 itab_tmp = _fjsp_dtox_v2r8(ewrt);
918 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
919 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
921 gmx_fjsp_load_2pair_swizzle_v2r8(ewtab+ewconv.i[0],ewtab+ewconv.i[1],
923 felec = _fjsp_madd_v2r8(eweps,ewtabFn,_fjsp_nmsub_v2r8(eweps,ewtabF,ewtabF));
924 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq10,rinv10),_fjsp_sub_v2r8(rinvsq10,felec));
928 /* Update vectorial force */
929 fix1 = _fjsp_madd_v2r8(dx10,fscal,fix1);
930 fiy1 = _fjsp_madd_v2r8(dy10,fscal,fiy1);
931 fiz1 = _fjsp_madd_v2r8(dz10,fscal,fiz1);
933 fjx0 = _fjsp_madd_v2r8(dx10,fscal,fjx0);
934 fjy0 = _fjsp_madd_v2r8(dy10,fscal,fjy0);
935 fjz0 = _fjsp_madd_v2r8(dz10,fscal,fjz0);
937 /**************************
938 * CALCULATE INTERACTIONS *
939 **************************/
941 r20 = _fjsp_mul_v2r8(rsq20,rinv20);
943 /* Compute parameters for interactions between i and j atoms */
944 qq20 = _fjsp_mul_v2r8(iq2,jq0);
946 /* EWALD ELECTROSTATICS */
948 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
949 ewrt = _fjsp_mul_v2r8(r20,ewtabscale);
950 itab_tmp = _fjsp_dtox_v2r8(ewrt);
951 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
952 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
954 gmx_fjsp_load_2pair_swizzle_v2r8(ewtab+ewconv.i[0],ewtab+ewconv.i[1],
956 felec = _fjsp_madd_v2r8(eweps,ewtabFn,_fjsp_nmsub_v2r8(eweps,ewtabF,ewtabF));
957 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq20,rinv20),_fjsp_sub_v2r8(rinvsq20,felec));
961 /* Update vectorial force */
962 fix2 = _fjsp_madd_v2r8(dx20,fscal,fix2);
963 fiy2 = _fjsp_madd_v2r8(dy20,fscal,fiy2);
964 fiz2 = _fjsp_madd_v2r8(dz20,fscal,fiz2);
966 fjx0 = _fjsp_madd_v2r8(dx20,fscal,fjx0);
967 fjy0 = _fjsp_madd_v2r8(dy20,fscal,fjy0);
968 fjz0 = _fjsp_madd_v2r8(dz20,fscal,fjz0);
970 /**************************
971 * CALCULATE INTERACTIONS *
972 **************************/
974 r30 = _fjsp_mul_v2r8(rsq30,rinv30);
976 /* Compute parameters for interactions between i and j atoms */
977 qq30 = _fjsp_mul_v2r8(iq3,jq0);
979 /* EWALD ELECTROSTATICS */
981 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
982 ewrt = _fjsp_mul_v2r8(r30,ewtabscale);
983 itab_tmp = _fjsp_dtox_v2r8(ewrt);
984 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
985 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
987 gmx_fjsp_load_2pair_swizzle_v2r8(ewtab+ewconv.i[0],ewtab+ewconv.i[1],
989 felec = _fjsp_madd_v2r8(eweps,ewtabFn,_fjsp_nmsub_v2r8(eweps,ewtabF,ewtabF));
990 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq30,rinv30),_fjsp_sub_v2r8(rinvsq30,felec));
994 /* Update vectorial force */
995 fix3 = _fjsp_madd_v2r8(dx30,fscal,fix3);
996 fiy3 = _fjsp_madd_v2r8(dy30,fscal,fiy3);
997 fiz3 = _fjsp_madd_v2r8(dz30,fscal,fiz3);
999 fjx0 = _fjsp_madd_v2r8(dx30,fscal,fjx0);
1000 fjy0 = _fjsp_madd_v2r8(dy30,fscal,fjy0);
1001 fjz0 = _fjsp_madd_v2r8(dz30,fscal,fjz0);
1003 gmx_fjsp_decrement_1rvec_2ptr_swizzle_v2r8(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0);
1005 /* Inner loop uses 168 flops */
1008 if(jidx<j_index_end)
1012 j_coord_offsetA = DIM*jnrA;
1014 /* load j atom coordinates */
1015 gmx_fjsp_load_1rvec_1ptr_swizzle_v2r8(x+j_coord_offsetA,
1018 /* Calculate displacement vector */
1019 dx00 = _fjsp_sub_v2r8(ix0,jx0);
1020 dy00 = _fjsp_sub_v2r8(iy0,jy0);
1021 dz00 = _fjsp_sub_v2r8(iz0,jz0);
1022 dx10 = _fjsp_sub_v2r8(ix1,jx0);
1023 dy10 = _fjsp_sub_v2r8(iy1,jy0);
1024 dz10 = _fjsp_sub_v2r8(iz1,jz0);
1025 dx20 = _fjsp_sub_v2r8(ix2,jx0);
1026 dy20 = _fjsp_sub_v2r8(iy2,jy0);
1027 dz20 = _fjsp_sub_v2r8(iz2,jz0);
1028 dx30 = _fjsp_sub_v2r8(ix3,jx0);
1029 dy30 = _fjsp_sub_v2r8(iy3,jy0);
1030 dz30 = _fjsp_sub_v2r8(iz3,jz0);
1032 /* Calculate squared distance and things based on it */
1033 rsq00 = gmx_fjsp_calc_rsq_v2r8(dx00,dy00,dz00);
1034 rsq10 = gmx_fjsp_calc_rsq_v2r8(dx10,dy10,dz10);
1035 rsq20 = gmx_fjsp_calc_rsq_v2r8(dx20,dy20,dz20);
1036 rsq30 = gmx_fjsp_calc_rsq_v2r8(dx30,dy30,dz30);
1038 rinv00 = gmx_fjsp_invsqrt_v2r8(rsq00);
1039 rinv10 = gmx_fjsp_invsqrt_v2r8(rsq10);
1040 rinv20 = gmx_fjsp_invsqrt_v2r8(rsq20);
1041 rinv30 = gmx_fjsp_invsqrt_v2r8(rsq30);
1043 rinvsq00 = _fjsp_mul_v2r8(rinv00,rinv00);
1044 rinvsq10 = _fjsp_mul_v2r8(rinv10,rinv10);
1045 rinvsq20 = _fjsp_mul_v2r8(rinv20,rinv20);
1046 rinvsq30 = _fjsp_mul_v2r8(rinv30,rinv30);
1048 /* Load parameters for j particles */
1049 jq0 = _fjsp_loadl_v2r8(_fjsp_setzero_v2r8(),charge+jnrA+0);
1050 vdwjidx0A = 2*vdwtype[jnrA+0];
1052 fjx0 = _fjsp_setzero_v2r8();
1053 fjy0 = _fjsp_setzero_v2r8();
1054 fjz0 = _fjsp_setzero_v2r8();
1056 /**************************
1057 * CALCULATE INTERACTIONS *
1058 **************************/
1060 r00 = _fjsp_mul_v2r8(rsq00,rinv00);
1062 /* Compute parameters for interactions between i and j atoms */
1063 gmx_fjsp_load_2pair_swizzle_v2r8(vdwparam+vdwioffset0+vdwjidx0A,
1064 vdwparam+vdwioffset0+vdwjidx0B,&c6_00,&c12_00);
1066 c6grid_00 = gmx_fjsp_load_2real_swizzle_v2r8(vdwgridparam+vdwioffset0+vdwjidx0A,
1067 vdwgridparam+vdwioffset0+vdwjidx0B);
1069 /* Analytical LJ-PME */
1070 rinvsix = _fjsp_mul_v2r8(_fjsp_mul_v2r8(rinvsq00,rinvsq00),rinvsq00);
1071 ewcljrsq = _fjsp_mul_v2r8(ewclj2,rsq00);
1072 ewclj6 = _fjsp_mul_v2r8(ewclj2,_fjsp_mul_v2r8(ewclj2,ewclj2));
1073 exponent = gmx_simd_exp_d(ewcljrsq);
1074 /* poly = exp(-(beta*r)^2) * (1 + (beta*r)^2 + (beta*r)^4 /2) */
1075 poly = _fjsp_mul_v2r8(exponent,_fjsp_madd_v2r8(_fjsp_mul_v2r8(ewcljrsq,ewcljrsq),one_half,_fjsp_sub_v2r8(one,ewcljrsq)));
1076 /* f6A = 6 * C6grid * (1 - poly) */
1077 f6A = _fjsp_mul_v2r8(c6grid_00,_fjsp_sub_v2r8(one,poly));
1078 /* f6B = C6grid * exponent * beta^6 */
1079 f6B = _fjsp_mul_v2r8(_fjsp_mul_v2r8(c6grid_00,one_sixth),_fjsp_mul_v2r8(exponent,ewclj6));
1080 /* fvdw = 12*C12/r13 - ((6*C6 - f6A)/r6 + f6B)/r */
1081 fvdw = _fjsp_mul_v2r8(_fjsp_madd_v2r8(_fjsp_msub_v2r8(c12_00,rinvsix,_fjsp_sub_v2r8(c6_00,f6A)),rinvsix,f6B),rinvsq00);
1085 fscal = _fjsp_unpacklo_v2r8(fscal,_fjsp_setzero_v2r8());
1087 /* Update vectorial force */
1088 fix0 = _fjsp_madd_v2r8(dx00,fscal,fix0);
1089 fiy0 = _fjsp_madd_v2r8(dy00,fscal,fiy0);
1090 fiz0 = _fjsp_madd_v2r8(dz00,fscal,fiz0);
1092 fjx0 = _fjsp_madd_v2r8(dx00,fscal,fjx0);
1093 fjy0 = _fjsp_madd_v2r8(dy00,fscal,fjy0);
1094 fjz0 = _fjsp_madd_v2r8(dz00,fscal,fjz0);
1096 /**************************
1097 * CALCULATE INTERACTIONS *
1098 **************************/
1100 r10 = _fjsp_mul_v2r8(rsq10,rinv10);
1102 /* Compute parameters for interactions between i and j atoms */
1103 qq10 = _fjsp_mul_v2r8(iq1,jq0);
1105 /* EWALD ELECTROSTATICS */
1107 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1108 ewrt = _fjsp_mul_v2r8(r10,ewtabscale);
1109 itab_tmp = _fjsp_dtox_v2r8(ewrt);
1110 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
1111 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
1113 gmx_fjsp_load_1pair_swizzle_v2r8(ewtab+ewconv.i[0],&ewtabF,&ewtabFn);
1114 felec = _fjsp_madd_v2r8(eweps,ewtabFn,_fjsp_nmsub_v2r8(eweps,ewtabF,ewtabF));
1115 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq10,rinv10),_fjsp_sub_v2r8(rinvsq10,felec));
1119 fscal = _fjsp_unpacklo_v2r8(fscal,_fjsp_setzero_v2r8());
1121 /* Update vectorial force */
1122 fix1 = _fjsp_madd_v2r8(dx10,fscal,fix1);
1123 fiy1 = _fjsp_madd_v2r8(dy10,fscal,fiy1);
1124 fiz1 = _fjsp_madd_v2r8(dz10,fscal,fiz1);
1126 fjx0 = _fjsp_madd_v2r8(dx10,fscal,fjx0);
1127 fjy0 = _fjsp_madd_v2r8(dy10,fscal,fjy0);
1128 fjz0 = _fjsp_madd_v2r8(dz10,fscal,fjz0);
1130 /**************************
1131 * CALCULATE INTERACTIONS *
1132 **************************/
1134 r20 = _fjsp_mul_v2r8(rsq20,rinv20);
1136 /* Compute parameters for interactions between i and j atoms */
1137 qq20 = _fjsp_mul_v2r8(iq2,jq0);
1139 /* EWALD ELECTROSTATICS */
1141 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1142 ewrt = _fjsp_mul_v2r8(r20,ewtabscale);
1143 itab_tmp = _fjsp_dtox_v2r8(ewrt);
1144 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
1145 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
1147 gmx_fjsp_load_1pair_swizzle_v2r8(ewtab+ewconv.i[0],&ewtabF,&ewtabFn);
1148 felec = _fjsp_madd_v2r8(eweps,ewtabFn,_fjsp_nmsub_v2r8(eweps,ewtabF,ewtabF));
1149 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq20,rinv20),_fjsp_sub_v2r8(rinvsq20,felec));
1153 fscal = _fjsp_unpacklo_v2r8(fscal,_fjsp_setzero_v2r8());
1155 /* Update vectorial force */
1156 fix2 = _fjsp_madd_v2r8(dx20,fscal,fix2);
1157 fiy2 = _fjsp_madd_v2r8(dy20,fscal,fiy2);
1158 fiz2 = _fjsp_madd_v2r8(dz20,fscal,fiz2);
1160 fjx0 = _fjsp_madd_v2r8(dx20,fscal,fjx0);
1161 fjy0 = _fjsp_madd_v2r8(dy20,fscal,fjy0);
1162 fjz0 = _fjsp_madd_v2r8(dz20,fscal,fjz0);
1164 /**************************
1165 * CALCULATE INTERACTIONS *
1166 **************************/
1168 r30 = _fjsp_mul_v2r8(rsq30,rinv30);
1170 /* Compute parameters for interactions between i and j atoms */
1171 qq30 = _fjsp_mul_v2r8(iq3,jq0);
1173 /* EWALD ELECTROSTATICS */
1175 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1176 ewrt = _fjsp_mul_v2r8(r30,ewtabscale);
1177 itab_tmp = _fjsp_dtox_v2r8(ewrt);
1178 eweps = _fjsp_sub_v2r8(ewrt,_fjsp_xtod_v2r8(itab_tmp));
1179 _fjsp_store_v2r8(&ewconv.simd,itab_tmp);
1181 gmx_fjsp_load_1pair_swizzle_v2r8(ewtab+ewconv.i[0],&ewtabF,&ewtabFn);
1182 felec = _fjsp_madd_v2r8(eweps,ewtabFn,_fjsp_nmsub_v2r8(eweps,ewtabF,ewtabF));
1183 felec = _fjsp_mul_v2r8(_fjsp_mul_v2r8(qq30,rinv30),_fjsp_sub_v2r8(rinvsq30,felec));
1187 fscal = _fjsp_unpacklo_v2r8(fscal,_fjsp_setzero_v2r8());
1189 /* Update vectorial force */
1190 fix3 = _fjsp_madd_v2r8(dx30,fscal,fix3);
1191 fiy3 = _fjsp_madd_v2r8(dy30,fscal,fiy3);
1192 fiz3 = _fjsp_madd_v2r8(dz30,fscal,fiz3);
1194 fjx0 = _fjsp_madd_v2r8(dx30,fscal,fjx0);
1195 fjy0 = _fjsp_madd_v2r8(dy30,fscal,fjy0);
1196 fjz0 = _fjsp_madd_v2r8(dz30,fscal,fjz0);
1198 gmx_fjsp_decrement_1rvec_1ptr_swizzle_v2r8(f+j_coord_offsetA,fjx0,fjy0,fjz0);
1200 /* Inner loop uses 168 flops */
1203 /* End of innermost loop */
1205 gmx_fjsp_update_iforce_4atom_swizzle_v2r8(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
1206 f+i_coord_offset,fshift+i_shift_offset);
1208 /* Increment number of inner iterations */
1209 inneriter += j_index_end - j_index_start;
1211 /* Outer loop uses 24 flops */
1214 /* Increment number of outer iterations */
1217 /* Update outer/inner flops */
1219 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W4_F,outeriter*24 + inneriter*168);