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36 * Note: this file was generated by the GROMACS avx_256_single kernel generator.
44 #include "../nb_kernel.h"
45 #include "types/simple.h"
46 #include "gromacs/math/vec.h"
49 #include "gromacs/simd/math_x86_avx_256_single.h"
50 #include "kernelutil_x86_avx_256_single.h"
53 * Gromacs nonbonded kernel: nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_VF_avx_256_single
54 * Electrostatics interaction: CubicSplineTable
55 * VdW interaction: LennardJones
56 * Geometry: Water4-Water4
57 * Calculate force/pot: PotentialAndForce
60 nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_VF_avx_256_single
61 (t_nblist * gmx_restrict nlist,
62 rvec * gmx_restrict xx,
63 rvec * gmx_restrict ff,
64 t_forcerec * gmx_restrict fr,
65 t_mdatoms * gmx_restrict mdatoms,
66 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
67 t_nrnb * gmx_restrict nrnb)
69 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
70 * just 0 for non-waters.
71 * Suffixes A,B,C,D,E,F,G,H refer to j loop unrolling done with AVX, e.g. for the eight different
72 * jnr indices corresponding to data put in the four positions in the SIMD register.
74 int i_shift_offset,i_coord_offset,outeriter,inneriter;
75 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
76 int jnrA,jnrB,jnrC,jnrD;
77 int jnrE,jnrF,jnrG,jnrH;
78 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
79 int jnrlistE,jnrlistF,jnrlistG,jnrlistH;
80 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
81 int j_coord_offsetE,j_coord_offsetF,j_coord_offsetG,j_coord_offsetH;
82 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
84 real *shiftvec,*fshift,*x,*f;
85 real *fjptrA,*fjptrB,*fjptrC,*fjptrD,*fjptrE,*fjptrF,*fjptrG,*fjptrH;
87 __m256 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
88 real * vdwioffsetptr0;
89 __m256 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
90 real * vdwioffsetptr1;
91 __m256 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
92 real * vdwioffsetptr2;
93 __m256 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
94 real * vdwioffsetptr3;
95 __m256 ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
96 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D,vdwjidx0E,vdwjidx0F,vdwjidx0G,vdwjidx0H;
97 __m256 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
98 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D,vdwjidx1E,vdwjidx1F,vdwjidx1G,vdwjidx1H;
99 __m256 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
100 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D,vdwjidx2E,vdwjidx2F,vdwjidx2G,vdwjidx2H;
101 __m256 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
102 int vdwjidx3A,vdwjidx3B,vdwjidx3C,vdwjidx3D,vdwjidx3E,vdwjidx3F,vdwjidx3G,vdwjidx3H;
103 __m256 jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
104 __m256 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
105 __m256 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
106 __m256 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
107 __m256 dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
108 __m256 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
109 __m256 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
110 __m256 dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
111 __m256 dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
112 __m256 dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
113 __m256 dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
114 __m256 velec,felec,velecsum,facel,crf,krf,krf2;
117 __m256 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
120 __m256 one_sixth = _mm256_set1_ps(1.0/6.0);
121 __m256 one_twelfth = _mm256_set1_ps(1.0/12.0);
123 __m128i vfitab_lo,vfitab_hi;
124 __m128i ifour = _mm_set1_epi32(4);
125 __m256 rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
127 __m256 dummy_mask,cutoff_mask;
128 __m256 signbit = _mm256_castsi256_ps( _mm256_set1_epi32(0x80000000) );
129 __m256 one = _mm256_set1_ps(1.0);
130 __m256 two = _mm256_set1_ps(2.0);
136 jindex = nlist->jindex;
138 shiftidx = nlist->shift;
140 shiftvec = fr->shift_vec[0];
141 fshift = fr->fshift[0];
142 facel = _mm256_set1_ps(fr->epsfac);
143 charge = mdatoms->chargeA;
144 nvdwtype = fr->ntype;
146 vdwtype = mdatoms->typeA;
148 vftab = kernel_data->table_elec->data;
149 vftabscale = _mm256_set1_ps(kernel_data->table_elec->scale);
151 /* Setup water-specific parameters */
152 inr = nlist->iinr[0];
153 iq1 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+1]));
154 iq2 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+2]));
155 iq3 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+3]));
156 vdwioffsetptr0 = vdwparam+2*nvdwtype*vdwtype[inr+0];
158 jq1 = _mm256_set1_ps(charge[inr+1]);
159 jq2 = _mm256_set1_ps(charge[inr+2]);
160 jq3 = _mm256_set1_ps(charge[inr+3]);
161 vdwjidx0A = 2*vdwtype[inr+0];
162 c6_00 = _mm256_set1_ps(vdwioffsetptr0[vdwjidx0A]);
163 c12_00 = _mm256_set1_ps(vdwioffsetptr0[vdwjidx0A+1]);
164 qq11 = _mm256_mul_ps(iq1,jq1);
165 qq12 = _mm256_mul_ps(iq1,jq2);
166 qq13 = _mm256_mul_ps(iq1,jq3);
167 qq21 = _mm256_mul_ps(iq2,jq1);
168 qq22 = _mm256_mul_ps(iq2,jq2);
169 qq23 = _mm256_mul_ps(iq2,jq3);
170 qq31 = _mm256_mul_ps(iq3,jq1);
171 qq32 = _mm256_mul_ps(iq3,jq2);
172 qq33 = _mm256_mul_ps(iq3,jq3);
174 /* Avoid stupid compiler warnings */
175 jnrA = jnrB = jnrC = jnrD = jnrE = jnrF = jnrG = jnrH = 0;
188 for(iidx=0;iidx<4*DIM;iidx++)
193 /* Start outer loop over neighborlists */
194 for(iidx=0; iidx<nri; iidx++)
196 /* Load shift vector for this list */
197 i_shift_offset = DIM*shiftidx[iidx];
199 /* Load limits for loop over neighbors */
200 j_index_start = jindex[iidx];
201 j_index_end = jindex[iidx+1];
203 /* Get outer coordinate index */
205 i_coord_offset = DIM*inr;
207 /* Load i particle coords and add shift vector */
208 gmx_mm256_load_shift_and_4rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset,
209 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
211 fix0 = _mm256_setzero_ps();
212 fiy0 = _mm256_setzero_ps();
213 fiz0 = _mm256_setzero_ps();
214 fix1 = _mm256_setzero_ps();
215 fiy1 = _mm256_setzero_ps();
216 fiz1 = _mm256_setzero_ps();
217 fix2 = _mm256_setzero_ps();
218 fiy2 = _mm256_setzero_ps();
219 fiz2 = _mm256_setzero_ps();
220 fix3 = _mm256_setzero_ps();
221 fiy3 = _mm256_setzero_ps();
222 fiz3 = _mm256_setzero_ps();
224 /* Reset potential sums */
225 velecsum = _mm256_setzero_ps();
226 vvdwsum = _mm256_setzero_ps();
228 /* Start inner kernel loop */
229 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+7]>=0; jidx+=8)
232 /* Get j neighbor index, and coordinate index */
241 j_coord_offsetA = DIM*jnrA;
242 j_coord_offsetB = DIM*jnrB;
243 j_coord_offsetC = DIM*jnrC;
244 j_coord_offsetD = DIM*jnrD;
245 j_coord_offsetE = DIM*jnrE;
246 j_coord_offsetF = DIM*jnrF;
247 j_coord_offsetG = DIM*jnrG;
248 j_coord_offsetH = DIM*jnrH;
250 /* load j atom coordinates */
251 gmx_mm256_load_4rvec_8ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
252 x+j_coord_offsetC,x+j_coord_offsetD,
253 x+j_coord_offsetE,x+j_coord_offsetF,
254 x+j_coord_offsetG,x+j_coord_offsetH,
255 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,
256 &jy2,&jz2,&jx3,&jy3,&jz3);
258 /* Calculate displacement vector */
259 dx00 = _mm256_sub_ps(ix0,jx0);
260 dy00 = _mm256_sub_ps(iy0,jy0);
261 dz00 = _mm256_sub_ps(iz0,jz0);
262 dx11 = _mm256_sub_ps(ix1,jx1);
263 dy11 = _mm256_sub_ps(iy1,jy1);
264 dz11 = _mm256_sub_ps(iz1,jz1);
265 dx12 = _mm256_sub_ps(ix1,jx2);
266 dy12 = _mm256_sub_ps(iy1,jy2);
267 dz12 = _mm256_sub_ps(iz1,jz2);
268 dx13 = _mm256_sub_ps(ix1,jx3);
269 dy13 = _mm256_sub_ps(iy1,jy3);
270 dz13 = _mm256_sub_ps(iz1,jz3);
271 dx21 = _mm256_sub_ps(ix2,jx1);
272 dy21 = _mm256_sub_ps(iy2,jy1);
273 dz21 = _mm256_sub_ps(iz2,jz1);
274 dx22 = _mm256_sub_ps(ix2,jx2);
275 dy22 = _mm256_sub_ps(iy2,jy2);
276 dz22 = _mm256_sub_ps(iz2,jz2);
277 dx23 = _mm256_sub_ps(ix2,jx3);
278 dy23 = _mm256_sub_ps(iy2,jy3);
279 dz23 = _mm256_sub_ps(iz2,jz3);
280 dx31 = _mm256_sub_ps(ix3,jx1);
281 dy31 = _mm256_sub_ps(iy3,jy1);
282 dz31 = _mm256_sub_ps(iz3,jz1);
283 dx32 = _mm256_sub_ps(ix3,jx2);
284 dy32 = _mm256_sub_ps(iy3,jy2);
285 dz32 = _mm256_sub_ps(iz3,jz2);
286 dx33 = _mm256_sub_ps(ix3,jx3);
287 dy33 = _mm256_sub_ps(iy3,jy3);
288 dz33 = _mm256_sub_ps(iz3,jz3);
290 /* Calculate squared distance and things based on it */
291 rsq00 = gmx_mm256_calc_rsq_ps(dx00,dy00,dz00);
292 rsq11 = gmx_mm256_calc_rsq_ps(dx11,dy11,dz11);
293 rsq12 = gmx_mm256_calc_rsq_ps(dx12,dy12,dz12);
294 rsq13 = gmx_mm256_calc_rsq_ps(dx13,dy13,dz13);
295 rsq21 = gmx_mm256_calc_rsq_ps(dx21,dy21,dz21);
296 rsq22 = gmx_mm256_calc_rsq_ps(dx22,dy22,dz22);
297 rsq23 = gmx_mm256_calc_rsq_ps(dx23,dy23,dz23);
298 rsq31 = gmx_mm256_calc_rsq_ps(dx31,dy31,dz31);
299 rsq32 = gmx_mm256_calc_rsq_ps(dx32,dy32,dz32);
300 rsq33 = gmx_mm256_calc_rsq_ps(dx33,dy33,dz33);
302 rinv11 = gmx_mm256_invsqrt_ps(rsq11);
303 rinv12 = gmx_mm256_invsqrt_ps(rsq12);
304 rinv13 = gmx_mm256_invsqrt_ps(rsq13);
305 rinv21 = gmx_mm256_invsqrt_ps(rsq21);
306 rinv22 = gmx_mm256_invsqrt_ps(rsq22);
307 rinv23 = gmx_mm256_invsqrt_ps(rsq23);
308 rinv31 = gmx_mm256_invsqrt_ps(rsq31);
309 rinv32 = gmx_mm256_invsqrt_ps(rsq32);
310 rinv33 = gmx_mm256_invsqrt_ps(rsq33);
312 rinvsq00 = gmx_mm256_inv_ps(rsq00);
314 fjx0 = _mm256_setzero_ps();
315 fjy0 = _mm256_setzero_ps();
316 fjz0 = _mm256_setzero_ps();
317 fjx1 = _mm256_setzero_ps();
318 fjy1 = _mm256_setzero_ps();
319 fjz1 = _mm256_setzero_ps();
320 fjx2 = _mm256_setzero_ps();
321 fjy2 = _mm256_setzero_ps();
322 fjz2 = _mm256_setzero_ps();
323 fjx3 = _mm256_setzero_ps();
324 fjy3 = _mm256_setzero_ps();
325 fjz3 = _mm256_setzero_ps();
327 /**************************
328 * CALCULATE INTERACTIONS *
329 **************************/
331 /* LENNARD-JONES DISPERSION/REPULSION */
333 rinvsix = _mm256_mul_ps(_mm256_mul_ps(rinvsq00,rinvsq00),rinvsq00);
334 vvdw6 = _mm256_mul_ps(c6_00,rinvsix);
335 vvdw12 = _mm256_mul_ps(c12_00,_mm256_mul_ps(rinvsix,rinvsix));
336 vvdw = _mm256_sub_ps( _mm256_mul_ps(vvdw12,one_twelfth) , _mm256_mul_ps(vvdw6,one_sixth) );
337 fvdw = _mm256_mul_ps(_mm256_sub_ps(vvdw12,vvdw6),rinvsq00);
339 /* Update potential sum for this i atom from the interaction with this j atom. */
340 vvdwsum = _mm256_add_ps(vvdwsum,vvdw);
344 /* Calculate temporary vectorial force */
345 tx = _mm256_mul_ps(fscal,dx00);
346 ty = _mm256_mul_ps(fscal,dy00);
347 tz = _mm256_mul_ps(fscal,dz00);
349 /* Update vectorial force */
350 fix0 = _mm256_add_ps(fix0,tx);
351 fiy0 = _mm256_add_ps(fiy0,ty);
352 fiz0 = _mm256_add_ps(fiz0,tz);
354 fjx0 = _mm256_add_ps(fjx0,tx);
355 fjy0 = _mm256_add_ps(fjy0,ty);
356 fjz0 = _mm256_add_ps(fjz0,tz);
358 /**************************
359 * CALCULATE INTERACTIONS *
360 **************************/
362 r11 = _mm256_mul_ps(rsq11,rinv11);
364 /* Calculate table index by multiplying r with table scale and truncate to integer */
365 rt = _mm256_mul_ps(r11,vftabscale);
366 vfitab = _mm256_cvttps_epi32(rt);
367 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
368 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
369 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
370 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
371 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
372 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
374 /* CUBIC SPLINE TABLE ELECTROSTATICS */
375 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
376 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
377 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
378 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
379 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
380 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
381 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
382 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
383 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
384 Heps = _mm256_mul_ps(vfeps,H);
385 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
386 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
387 velec = _mm256_mul_ps(qq11,VV);
388 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
389 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq11,FF),_mm256_mul_ps(vftabscale,rinv11)));
391 /* Update potential sum for this i atom from the interaction with this j atom. */
392 velecsum = _mm256_add_ps(velecsum,velec);
396 /* Calculate temporary vectorial force */
397 tx = _mm256_mul_ps(fscal,dx11);
398 ty = _mm256_mul_ps(fscal,dy11);
399 tz = _mm256_mul_ps(fscal,dz11);
401 /* Update vectorial force */
402 fix1 = _mm256_add_ps(fix1,tx);
403 fiy1 = _mm256_add_ps(fiy1,ty);
404 fiz1 = _mm256_add_ps(fiz1,tz);
406 fjx1 = _mm256_add_ps(fjx1,tx);
407 fjy1 = _mm256_add_ps(fjy1,ty);
408 fjz1 = _mm256_add_ps(fjz1,tz);
410 /**************************
411 * CALCULATE INTERACTIONS *
412 **************************/
414 r12 = _mm256_mul_ps(rsq12,rinv12);
416 /* Calculate table index by multiplying r with table scale and truncate to integer */
417 rt = _mm256_mul_ps(r12,vftabscale);
418 vfitab = _mm256_cvttps_epi32(rt);
419 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
420 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
421 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
422 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
423 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
424 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
426 /* CUBIC SPLINE TABLE ELECTROSTATICS */
427 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
428 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
429 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
430 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
431 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
432 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
433 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
434 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
435 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
436 Heps = _mm256_mul_ps(vfeps,H);
437 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
438 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
439 velec = _mm256_mul_ps(qq12,VV);
440 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
441 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq12,FF),_mm256_mul_ps(vftabscale,rinv12)));
443 /* Update potential sum for this i atom from the interaction with this j atom. */
444 velecsum = _mm256_add_ps(velecsum,velec);
448 /* Calculate temporary vectorial force */
449 tx = _mm256_mul_ps(fscal,dx12);
450 ty = _mm256_mul_ps(fscal,dy12);
451 tz = _mm256_mul_ps(fscal,dz12);
453 /* Update vectorial force */
454 fix1 = _mm256_add_ps(fix1,tx);
455 fiy1 = _mm256_add_ps(fiy1,ty);
456 fiz1 = _mm256_add_ps(fiz1,tz);
458 fjx2 = _mm256_add_ps(fjx2,tx);
459 fjy2 = _mm256_add_ps(fjy2,ty);
460 fjz2 = _mm256_add_ps(fjz2,tz);
462 /**************************
463 * CALCULATE INTERACTIONS *
464 **************************/
466 r13 = _mm256_mul_ps(rsq13,rinv13);
468 /* Calculate table index by multiplying r with table scale and truncate to integer */
469 rt = _mm256_mul_ps(r13,vftabscale);
470 vfitab = _mm256_cvttps_epi32(rt);
471 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
472 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
473 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
474 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
475 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
476 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
478 /* CUBIC SPLINE TABLE ELECTROSTATICS */
479 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
480 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
481 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
482 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
483 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
484 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
485 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
486 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
487 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
488 Heps = _mm256_mul_ps(vfeps,H);
489 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
490 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
491 velec = _mm256_mul_ps(qq13,VV);
492 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
493 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq13,FF),_mm256_mul_ps(vftabscale,rinv13)));
495 /* Update potential sum for this i atom from the interaction with this j atom. */
496 velecsum = _mm256_add_ps(velecsum,velec);
500 /* Calculate temporary vectorial force */
501 tx = _mm256_mul_ps(fscal,dx13);
502 ty = _mm256_mul_ps(fscal,dy13);
503 tz = _mm256_mul_ps(fscal,dz13);
505 /* Update vectorial force */
506 fix1 = _mm256_add_ps(fix1,tx);
507 fiy1 = _mm256_add_ps(fiy1,ty);
508 fiz1 = _mm256_add_ps(fiz1,tz);
510 fjx3 = _mm256_add_ps(fjx3,tx);
511 fjy3 = _mm256_add_ps(fjy3,ty);
512 fjz3 = _mm256_add_ps(fjz3,tz);
514 /**************************
515 * CALCULATE INTERACTIONS *
516 **************************/
518 r21 = _mm256_mul_ps(rsq21,rinv21);
520 /* Calculate table index by multiplying r with table scale and truncate to integer */
521 rt = _mm256_mul_ps(r21,vftabscale);
522 vfitab = _mm256_cvttps_epi32(rt);
523 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
524 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
525 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
526 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
527 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
528 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
530 /* CUBIC SPLINE TABLE ELECTROSTATICS */
531 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
532 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
533 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
534 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
535 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
536 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
537 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
538 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
539 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
540 Heps = _mm256_mul_ps(vfeps,H);
541 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
542 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
543 velec = _mm256_mul_ps(qq21,VV);
544 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
545 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq21,FF),_mm256_mul_ps(vftabscale,rinv21)));
547 /* Update potential sum for this i atom from the interaction with this j atom. */
548 velecsum = _mm256_add_ps(velecsum,velec);
552 /* Calculate temporary vectorial force */
553 tx = _mm256_mul_ps(fscal,dx21);
554 ty = _mm256_mul_ps(fscal,dy21);
555 tz = _mm256_mul_ps(fscal,dz21);
557 /* Update vectorial force */
558 fix2 = _mm256_add_ps(fix2,tx);
559 fiy2 = _mm256_add_ps(fiy2,ty);
560 fiz2 = _mm256_add_ps(fiz2,tz);
562 fjx1 = _mm256_add_ps(fjx1,tx);
563 fjy1 = _mm256_add_ps(fjy1,ty);
564 fjz1 = _mm256_add_ps(fjz1,tz);
566 /**************************
567 * CALCULATE INTERACTIONS *
568 **************************/
570 r22 = _mm256_mul_ps(rsq22,rinv22);
572 /* Calculate table index by multiplying r with table scale and truncate to integer */
573 rt = _mm256_mul_ps(r22,vftabscale);
574 vfitab = _mm256_cvttps_epi32(rt);
575 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
576 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
577 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
578 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
579 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
580 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
582 /* CUBIC SPLINE TABLE ELECTROSTATICS */
583 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
584 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
585 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
586 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
587 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
588 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
589 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
590 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
591 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
592 Heps = _mm256_mul_ps(vfeps,H);
593 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
594 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
595 velec = _mm256_mul_ps(qq22,VV);
596 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
597 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq22,FF),_mm256_mul_ps(vftabscale,rinv22)));
599 /* Update potential sum for this i atom from the interaction with this j atom. */
600 velecsum = _mm256_add_ps(velecsum,velec);
604 /* Calculate temporary vectorial force */
605 tx = _mm256_mul_ps(fscal,dx22);
606 ty = _mm256_mul_ps(fscal,dy22);
607 tz = _mm256_mul_ps(fscal,dz22);
609 /* Update vectorial force */
610 fix2 = _mm256_add_ps(fix2,tx);
611 fiy2 = _mm256_add_ps(fiy2,ty);
612 fiz2 = _mm256_add_ps(fiz2,tz);
614 fjx2 = _mm256_add_ps(fjx2,tx);
615 fjy2 = _mm256_add_ps(fjy2,ty);
616 fjz2 = _mm256_add_ps(fjz2,tz);
618 /**************************
619 * CALCULATE INTERACTIONS *
620 **************************/
622 r23 = _mm256_mul_ps(rsq23,rinv23);
624 /* Calculate table index by multiplying r with table scale and truncate to integer */
625 rt = _mm256_mul_ps(r23,vftabscale);
626 vfitab = _mm256_cvttps_epi32(rt);
627 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
628 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
629 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
630 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
631 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
632 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
634 /* CUBIC SPLINE TABLE ELECTROSTATICS */
635 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
636 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
637 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
638 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
639 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
640 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
641 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
642 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
643 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
644 Heps = _mm256_mul_ps(vfeps,H);
645 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
646 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
647 velec = _mm256_mul_ps(qq23,VV);
648 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
649 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq23,FF),_mm256_mul_ps(vftabscale,rinv23)));
651 /* Update potential sum for this i atom from the interaction with this j atom. */
652 velecsum = _mm256_add_ps(velecsum,velec);
656 /* Calculate temporary vectorial force */
657 tx = _mm256_mul_ps(fscal,dx23);
658 ty = _mm256_mul_ps(fscal,dy23);
659 tz = _mm256_mul_ps(fscal,dz23);
661 /* Update vectorial force */
662 fix2 = _mm256_add_ps(fix2,tx);
663 fiy2 = _mm256_add_ps(fiy2,ty);
664 fiz2 = _mm256_add_ps(fiz2,tz);
666 fjx3 = _mm256_add_ps(fjx3,tx);
667 fjy3 = _mm256_add_ps(fjy3,ty);
668 fjz3 = _mm256_add_ps(fjz3,tz);
670 /**************************
671 * CALCULATE INTERACTIONS *
672 **************************/
674 r31 = _mm256_mul_ps(rsq31,rinv31);
676 /* Calculate table index by multiplying r with table scale and truncate to integer */
677 rt = _mm256_mul_ps(r31,vftabscale);
678 vfitab = _mm256_cvttps_epi32(rt);
679 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
680 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
681 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
682 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
683 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
684 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
686 /* CUBIC SPLINE TABLE ELECTROSTATICS */
687 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
688 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
689 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
690 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
691 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
692 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
693 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
694 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
695 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
696 Heps = _mm256_mul_ps(vfeps,H);
697 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
698 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
699 velec = _mm256_mul_ps(qq31,VV);
700 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
701 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq31,FF),_mm256_mul_ps(vftabscale,rinv31)));
703 /* Update potential sum for this i atom from the interaction with this j atom. */
704 velecsum = _mm256_add_ps(velecsum,velec);
708 /* Calculate temporary vectorial force */
709 tx = _mm256_mul_ps(fscal,dx31);
710 ty = _mm256_mul_ps(fscal,dy31);
711 tz = _mm256_mul_ps(fscal,dz31);
713 /* Update vectorial force */
714 fix3 = _mm256_add_ps(fix3,tx);
715 fiy3 = _mm256_add_ps(fiy3,ty);
716 fiz3 = _mm256_add_ps(fiz3,tz);
718 fjx1 = _mm256_add_ps(fjx1,tx);
719 fjy1 = _mm256_add_ps(fjy1,ty);
720 fjz1 = _mm256_add_ps(fjz1,tz);
722 /**************************
723 * CALCULATE INTERACTIONS *
724 **************************/
726 r32 = _mm256_mul_ps(rsq32,rinv32);
728 /* Calculate table index by multiplying r with table scale and truncate to integer */
729 rt = _mm256_mul_ps(r32,vftabscale);
730 vfitab = _mm256_cvttps_epi32(rt);
731 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
732 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
733 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
734 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
735 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
736 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
738 /* CUBIC SPLINE TABLE ELECTROSTATICS */
739 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
740 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
741 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
742 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
743 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
744 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
745 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
746 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
747 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
748 Heps = _mm256_mul_ps(vfeps,H);
749 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
750 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
751 velec = _mm256_mul_ps(qq32,VV);
752 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
753 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq32,FF),_mm256_mul_ps(vftabscale,rinv32)));
755 /* Update potential sum for this i atom from the interaction with this j atom. */
756 velecsum = _mm256_add_ps(velecsum,velec);
760 /* Calculate temporary vectorial force */
761 tx = _mm256_mul_ps(fscal,dx32);
762 ty = _mm256_mul_ps(fscal,dy32);
763 tz = _mm256_mul_ps(fscal,dz32);
765 /* Update vectorial force */
766 fix3 = _mm256_add_ps(fix3,tx);
767 fiy3 = _mm256_add_ps(fiy3,ty);
768 fiz3 = _mm256_add_ps(fiz3,tz);
770 fjx2 = _mm256_add_ps(fjx2,tx);
771 fjy2 = _mm256_add_ps(fjy2,ty);
772 fjz2 = _mm256_add_ps(fjz2,tz);
774 /**************************
775 * CALCULATE INTERACTIONS *
776 **************************/
778 r33 = _mm256_mul_ps(rsq33,rinv33);
780 /* Calculate table index by multiplying r with table scale and truncate to integer */
781 rt = _mm256_mul_ps(r33,vftabscale);
782 vfitab = _mm256_cvttps_epi32(rt);
783 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
784 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
785 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
786 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
787 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
788 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
790 /* CUBIC SPLINE TABLE ELECTROSTATICS */
791 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
792 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
793 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
794 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
795 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
796 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
797 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
798 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
799 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
800 Heps = _mm256_mul_ps(vfeps,H);
801 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
802 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
803 velec = _mm256_mul_ps(qq33,VV);
804 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
805 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq33,FF),_mm256_mul_ps(vftabscale,rinv33)));
807 /* Update potential sum for this i atom from the interaction with this j atom. */
808 velecsum = _mm256_add_ps(velecsum,velec);
812 /* Calculate temporary vectorial force */
813 tx = _mm256_mul_ps(fscal,dx33);
814 ty = _mm256_mul_ps(fscal,dy33);
815 tz = _mm256_mul_ps(fscal,dz33);
817 /* Update vectorial force */
818 fix3 = _mm256_add_ps(fix3,tx);
819 fiy3 = _mm256_add_ps(fiy3,ty);
820 fiz3 = _mm256_add_ps(fiz3,tz);
822 fjx3 = _mm256_add_ps(fjx3,tx);
823 fjy3 = _mm256_add_ps(fjy3,ty);
824 fjz3 = _mm256_add_ps(fjz3,tz);
826 fjptrA = f+j_coord_offsetA;
827 fjptrB = f+j_coord_offsetB;
828 fjptrC = f+j_coord_offsetC;
829 fjptrD = f+j_coord_offsetD;
830 fjptrE = f+j_coord_offsetE;
831 fjptrF = f+j_coord_offsetF;
832 fjptrG = f+j_coord_offsetG;
833 fjptrH = f+j_coord_offsetH;
835 gmx_mm256_decrement_4rvec_8ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,fjptrE,fjptrF,fjptrG,fjptrH,
836 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,
837 fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
839 /* Inner loop uses 422 flops */
845 /* Get j neighbor index, and coordinate index */
846 jnrlistA = jjnr[jidx];
847 jnrlistB = jjnr[jidx+1];
848 jnrlistC = jjnr[jidx+2];
849 jnrlistD = jjnr[jidx+3];
850 jnrlistE = jjnr[jidx+4];
851 jnrlistF = jjnr[jidx+5];
852 jnrlistG = jjnr[jidx+6];
853 jnrlistH = jjnr[jidx+7];
854 /* Sign of each element will be negative for non-real atoms.
855 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
856 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
858 dummy_mask = gmx_mm256_set_m128(gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx+4)),_mm_setzero_si128())),
859 gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128())));
861 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
862 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
863 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
864 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
865 jnrE = (jnrlistE>=0) ? jnrlistE : 0;
866 jnrF = (jnrlistF>=0) ? jnrlistF : 0;
867 jnrG = (jnrlistG>=0) ? jnrlistG : 0;
868 jnrH = (jnrlistH>=0) ? jnrlistH : 0;
869 j_coord_offsetA = DIM*jnrA;
870 j_coord_offsetB = DIM*jnrB;
871 j_coord_offsetC = DIM*jnrC;
872 j_coord_offsetD = DIM*jnrD;
873 j_coord_offsetE = DIM*jnrE;
874 j_coord_offsetF = DIM*jnrF;
875 j_coord_offsetG = DIM*jnrG;
876 j_coord_offsetH = DIM*jnrH;
878 /* load j atom coordinates */
879 gmx_mm256_load_4rvec_8ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
880 x+j_coord_offsetC,x+j_coord_offsetD,
881 x+j_coord_offsetE,x+j_coord_offsetF,
882 x+j_coord_offsetG,x+j_coord_offsetH,
883 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,
884 &jy2,&jz2,&jx3,&jy3,&jz3);
886 /* Calculate displacement vector */
887 dx00 = _mm256_sub_ps(ix0,jx0);
888 dy00 = _mm256_sub_ps(iy0,jy0);
889 dz00 = _mm256_sub_ps(iz0,jz0);
890 dx11 = _mm256_sub_ps(ix1,jx1);
891 dy11 = _mm256_sub_ps(iy1,jy1);
892 dz11 = _mm256_sub_ps(iz1,jz1);
893 dx12 = _mm256_sub_ps(ix1,jx2);
894 dy12 = _mm256_sub_ps(iy1,jy2);
895 dz12 = _mm256_sub_ps(iz1,jz2);
896 dx13 = _mm256_sub_ps(ix1,jx3);
897 dy13 = _mm256_sub_ps(iy1,jy3);
898 dz13 = _mm256_sub_ps(iz1,jz3);
899 dx21 = _mm256_sub_ps(ix2,jx1);
900 dy21 = _mm256_sub_ps(iy2,jy1);
901 dz21 = _mm256_sub_ps(iz2,jz1);
902 dx22 = _mm256_sub_ps(ix2,jx2);
903 dy22 = _mm256_sub_ps(iy2,jy2);
904 dz22 = _mm256_sub_ps(iz2,jz2);
905 dx23 = _mm256_sub_ps(ix2,jx3);
906 dy23 = _mm256_sub_ps(iy2,jy3);
907 dz23 = _mm256_sub_ps(iz2,jz3);
908 dx31 = _mm256_sub_ps(ix3,jx1);
909 dy31 = _mm256_sub_ps(iy3,jy1);
910 dz31 = _mm256_sub_ps(iz3,jz1);
911 dx32 = _mm256_sub_ps(ix3,jx2);
912 dy32 = _mm256_sub_ps(iy3,jy2);
913 dz32 = _mm256_sub_ps(iz3,jz2);
914 dx33 = _mm256_sub_ps(ix3,jx3);
915 dy33 = _mm256_sub_ps(iy3,jy3);
916 dz33 = _mm256_sub_ps(iz3,jz3);
918 /* Calculate squared distance and things based on it */
919 rsq00 = gmx_mm256_calc_rsq_ps(dx00,dy00,dz00);
920 rsq11 = gmx_mm256_calc_rsq_ps(dx11,dy11,dz11);
921 rsq12 = gmx_mm256_calc_rsq_ps(dx12,dy12,dz12);
922 rsq13 = gmx_mm256_calc_rsq_ps(dx13,dy13,dz13);
923 rsq21 = gmx_mm256_calc_rsq_ps(dx21,dy21,dz21);
924 rsq22 = gmx_mm256_calc_rsq_ps(dx22,dy22,dz22);
925 rsq23 = gmx_mm256_calc_rsq_ps(dx23,dy23,dz23);
926 rsq31 = gmx_mm256_calc_rsq_ps(dx31,dy31,dz31);
927 rsq32 = gmx_mm256_calc_rsq_ps(dx32,dy32,dz32);
928 rsq33 = gmx_mm256_calc_rsq_ps(dx33,dy33,dz33);
930 rinv11 = gmx_mm256_invsqrt_ps(rsq11);
931 rinv12 = gmx_mm256_invsqrt_ps(rsq12);
932 rinv13 = gmx_mm256_invsqrt_ps(rsq13);
933 rinv21 = gmx_mm256_invsqrt_ps(rsq21);
934 rinv22 = gmx_mm256_invsqrt_ps(rsq22);
935 rinv23 = gmx_mm256_invsqrt_ps(rsq23);
936 rinv31 = gmx_mm256_invsqrt_ps(rsq31);
937 rinv32 = gmx_mm256_invsqrt_ps(rsq32);
938 rinv33 = gmx_mm256_invsqrt_ps(rsq33);
940 rinvsq00 = gmx_mm256_inv_ps(rsq00);
942 fjx0 = _mm256_setzero_ps();
943 fjy0 = _mm256_setzero_ps();
944 fjz0 = _mm256_setzero_ps();
945 fjx1 = _mm256_setzero_ps();
946 fjy1 = _mm256_setzero_ps();
947 fjz1 = _mm256_setzero_ps();
948 fjx2 = _mm256_setzero_ps();
949 fjy2 = _mm256_setzero_ps();
950 fjz2 = _mm256_setzero_ps();
951 fjx3 = _mm256_setzero_ps();
952 fjy3 = _mm256_setzero_ps();
953 fjz3 = _mm256_setzero_ps();
955 /**************************
956 * CALCULATE INTERACTIONS *
957 **************************/
959 /* LENNARD-JONES DISPERSION/REPULSION */
961 rinvsix = _mm256_mul_ps(_mm256_mul_ps(rinvsq00,rinvsq00),rinvsq00);
962 vvdw6 = _mm256_mul_ps(c6_00,rinvsix);
963 vvdw12 = _mm256_mul_ps(c12_00,_mm256_mul_ps(rinvsix,rinvsix));
964 vvdw = _mm256_sub_ps( _mm256_mul_ps(vvdw12,one_twelfth) , _mm256_mul_ps(vvdw6,one_sixth) );
965 fvdw = _mm256_mul_ps(_mm256_sub_ps(vvdw12,vvdw6),rinvsq00);
967 /* Update potential sum for this i atom from the interaction with this j atom. */
968 vvdw = _mm256_andnot_ps(dummy_mask,vvdw);
969 vvdwsum = _mm256_add_ps(vvdwsum,vvdw);
973 fscal = _mm256_andnot_ps(dummy_mask,fscal);
975 /* Calculate temporary vectorial force */
976 tx = _mm256_mul_ps(fscal,dx00);
977 ty = _mm256_mul_ps(fscal,dy00);
978 tz = _mm256_mul_ps(fscal,dz00);
980 /* Update vectorial force */
981 fix0 = _mm256_add_ps(fix0,tx);
982 fiy0 = _mm256_add_ps(fiy0,ty);
983 fiz0 = _mm256_add_ps(fiz0,tz);
985 fjx0 = _mm256_add_ps(fjx0,tx);
986 fjy0 = _mm256_add_ps(fjy0,ty);
987 fjz0 = _mm256_add_ps(fjz0,tz);
989 /**************************
990 * CALCULATE INTERACTIONS *
991 **************************/
993 r11 = _mm256_mul_ps(rsq11,rinv11);
994 r11 = _mm256_andnot_ps(dummy_mask,r11);
996 /* Calculate table index by multiplying r with table scale and truncate to integer */
997 rt = _mm256_mul_ps(r11,vftabscale);
998 vfitab = _mm256_cvttps_epi32(rt);
999 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1000 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1001 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1002 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1003 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1004 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1006 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1007 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1008 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1009 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1010 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1011 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1012 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1013 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1014 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1015 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1016 Heps = _mm256_mul_ps(vfeps,H);
1017 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1018 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1019 velec = _mm256_mul_ps(qq11,VV);
1020 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1021 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq11,FF),_mm256_mul_ps(vftabscale,rinv11)));
1023 /* Update potential sum for this i atom from the interaction with this j atom. */
1024 velec = _mm256_andnot_ps(dummy_mask,velec);
1025 velecsum = _mm256_add_ps(velecsum,velec);
1029 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1031 /* Calculate temporary vectorial force */
1032 tx = _mm256_mul_ps(fscal,dx11);
1033 ty = _mm256_mul_ps(fscal,dy11);
1034 tz = _mm256_mul_ps(fscal,dz11);
1036 /* Update vectorial force */
1037 fix1 = _mm256_add_ps(fix1,tx);
1038 fiy1 = _mm256_add_ps(fiy1,ty);
1039 fiz1 = _mm256_add_ps(fiz1,tz);
1041 fjx1 = _mm256_add_ps(fjx1,tx);
1042 fjy1 = _mm256_add_ps(fjy1,ty);
1043 fjz1 = _mm256_add_ps(fjz1,tz);
1045 /**************************
1046 * CALCULATE INTERACTIONS *
1047 **************************/
1049 r12 = _mm256_mul_ps(rsq12,rinv12);
1050 r12 = _mm256_andnot_ps(dummy_mask,r12);
1052 /* Calculate table index by multiplying r with table scale and truncate to integer */
1053 rt = _mm256_mul_ps(r12,vftabscale);
1054 vfitab = _mm256_cvttps_epi32(rt);
1055 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1056 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1057 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1058 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1059 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1060 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1062 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1063 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1064 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1065 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1066 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1067 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1068 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1069 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1070 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1071 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1072 Heps = _mm256_mul_ps(vfeps,H);
1073 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1074 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1075 velec = _mm256_mul_ps(qq12,VV);
1076 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1077 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq12,FF),_mm256_mul_ps(vftabscale,rinv12)));
1079 /* Update potential sum for this i atom from the interaction with this j atom. */
1080 velec = _mm256_andnot_ps(dummy_mask,velec);
1081 velecsum = _mm256_add_ps(velecsum,velec);
1085 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1087 /* Calculate temporary vectorial force */
1088 tx = _mm256_mul_ps(fscal,dx12);
1089 ty = _mm256_mul_ps(fscal,dy12);
1090 tz = _mm256_mul_ps(fscal,dz12);
1092 /* Update vectorial force */
1093 fix1 = _mm256_add_ps(fix1,tx);
1094 fiy1 = _mm256_add_ps(fiy1,ty);
1095 fiz1 = _mm256_add_ps(fiz1,tz);
1097 fjx2 = _mm256_add_ps(fjx2,tx);
1098 fjy2 = _mm256_add_ps(fjy2,ty);
1099 fjz2 = _mm256_add_ps(fjz2,tz);
1101 /**************************
1102 * CALCULATE INTERACTIONS *
1103 **************************/
1105 r13 = _mm256_mul_ps(rsq13,rinv13);
1106 r13 = _mm256_andnot_ps(dummy_mask,r13);
1108 /* Calculate table index by multiplying r with table scale and truncate to integer */
1109 rt = _mm256_mul_ps(r13,vftabscale);
1110 vfitab = _mm256_cvttps_epi32(rt);
1111 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1112 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1113 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1114 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1115 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1116 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1118 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1119 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1120 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1121 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1122 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1123 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1124 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1125 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1126 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1127 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1128 Heps = _mm256_mul_ps(vfeps,H);
1129 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1130 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1131 velec = _mm256_mul_ps(qq13,VV);
1132 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1133 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq13,FF),_mm256_mul_ps(vftabscale,rinv13)));
1135 /* Update potential sum for this i atom from the interaction with this j atom. */
1136 velec = _mm256_andnot_ps(dummy_mask,velec);
1137 velecsum = _mm256_add_ps(velecsum,velec);
1141 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1143 /* Calculate temporary vectorial force */
1144 tx = _mm256_mul_ps(fscal,dx13);
1145 ty = _mm256_mul_ps(fscal,dy13);
1146 tz = _mm256_mul_ps(fscal,dz13);
1148 /* Update vectorial force */
1149 fix1 = _mm256_add_ps(fix1,tx);
1150 fiy1 = _mm256_add_ps(fiy1,ty);
1151 fiz1 = _mm256_add_ps(fiz1,tz);
1153 fjx3 = _mm256_add_ps(fjx3,tx);
1154 fjy3 = _mm256_add_ps(fjy3,ty);
1155 fjz3 = _mm256_add_ps(fjz3,tz);
1157 /**************************
1158 * CALCULATE INTERACTIONS *
1159 **************************/
1161 r21 = _mm256_mul_ps(rsq21,rinv21);
1162 r21 = _mm256_andnot_ps(dummy_mask,r21);
1164 /* Calculate table index by multiplying r with table scale and truncate to integer */
1165 rt = _mm256_mul_ps(r21,vftabscale);
1166 vfitab = _mm256_cvttps_epi32(rt);
1167 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1168 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1169 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1170 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1171 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1172 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1174 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1175 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1176 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1177 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1178 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1179 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1180 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1181 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1182 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1183 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1184 Heps = _mm256_mul_ps(vfeps,H);
1185 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1186 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1187 velec = _mm256_mul_ps(qq21,VV);
1188 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1189 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq21,FF),_mm256_mul_ps(vftabscale,rinv21)));
1191 /* Update potential sum for this i atom from the interaction with this j atom. */
1192 velec = _mm256_andnot_ps(dummy_mask,velec);
1193 velecsum = _mm256_add_ps(velecsum,velec);
1197 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1199 /* Calculate temporary vectorial force */
1200 tx = _mm256_mul_ps(fscal,dx21);
1201 ty = _mm256_mul_ps(fscal,dy21);
1202 tz = _mm256_mul_ps(fscal,dz21);
1204 /* Update vectorial force */
1205 fix2 = _mm256_add_ps(fix2,tx);
1206 fiy2 = _mm256_add_ps(fiy2,ty);
1207 fiz2 = _mm256_add_ps(fiz2,tz);
1209 fjx1 = _mm256_add_ps(fjx1,tx);
1210 fjy1 = _mm256_add_ps(fjy1,ty);
1211 fjz1 = _mm256_add_ps(fjz1,tz);
1213 /**************************
1214 * CALCULATE INTERACTIONS *
1215 **************************/
1217 r22 = _mm256_mul_ps(rsq22,rinv22);
1218 r22 = _mm256_andnot_ps(dummy_mask,r22);
1220 /* Calculate table index by multiplying r with table scale and truncate to integer */
1221 rt = _mm256_mul_ps(r22,vftabscale);
1222 vfitab = _mm256_cvttps_epi32(rt);
1223 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1224 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1225 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1226 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1227 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1228 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1230 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1231 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1232 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1233 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1234 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1235 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1236 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1237 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1238 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1239 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1240 Heps = _mm256_mul_ps(vfeps,H);
1241 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1242 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1243 velec = _mm256_mul_ps(qq22,VV);
1244 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1245 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq22,FF),_mm256_mul_ps(vftabscale,rinv22)));
1247 /* Update potential sum for this i atom from the interaction with this j atom. */
1248 velec = _mm256_andnot_ps(dummy_mask,velec);
1249 velecsum = _mm256_add_ps(velecsum,velec);
1253 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1255 /* Calculate temporary vectorial force */
1256 tx = _mm256_mul_ps(fscal,dx22);
1257 ty = _mm256_mul_ps(fscal,dy22);
1258 tz = _mm256_mul_ps(fscal,dz22);
1260 /* Update vectorial force */
1261 fix2 = _mm256_add_ps(fix2,tx);
1262 fiy2 = _mm256_add_ps(fiy2,ty);
1263 fiz2 = _mm256_add_ps(fiz2,tz);
1265 fjx2 = _mm256_add_ps(fjx2,tx);
1266 fjy2 = _mm256_add_ps(fjy2,ty);
1267 fjz2 = _mm256_add_ps(fjz2,tz);
1269 /**************************
1270 * CALCULATE INTERACTIONS *
1271 **************************/
1273 r23 = _mm256_mul_ps(rsq23,rinv23);
1274 r23 = _mm256_andnot_ps(dummy_mask,r23);
1276 /* Calculate table index by multiplying r with table scale and truncate to integer */
1277 rt = _mm256_mul_ps(r23,vftabscale);
1278 vfitab = _mm256_cvttps_epi32(rt);
1279 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1280 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1281 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1282 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1283 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1284 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1286 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1287 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1288 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1289 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1290 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1291 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1292 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1293 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1294 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1295 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1296 Heps = _mm256_mul_ps(vfeps,H);
1297 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1298 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1299 velec = _mm256_mul_ps(qq23,VV);
1300 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1301 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq23,FF),_mm256_mul_ps(vftabscale,rinv23)));
1303 /* Update potential sum for this i atom from the interaction with this j atom. */
1304 velec = _mm256_andnot_ps(dummy_mask,velec);
1305 velecsum = _mm256_add_ps(velecsum,velec);
1309 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1311 /* Calculate temporary vectorial force */
1312 tx = _mm256_mul_ps(fscal,dx23);
1313 ty = _mm256_mul_ps(fscal,dy23);
1314 tz = _mm256_mul_ps(fscal,dz23);
1316 /* Update vectorial force */
1317 fix2 = _mm256_add_ps(fix2,tx);
1318 fiy2 = _mm256_add_ps(fiy2,ty);
1319 fiz2 = _mm256_add_ps(fiz2,tz);
1321 fjx3 = _mm256_add_ps(fjx3,tx);
1322 fjy3 = _mm256_add_ps(fjy3,ty);
1323 fjz3 = _mm256_add_ps(fjz3,tz);
1325 /**************************
1326 * CALCULATE INTERACTIONS *
1327 **************************/
1329 r31 = _mm256_mul_ps(rsq31,rinv31);
1330 r31 = _mm256_andnot_ps(dummy_mask,r31);
1332 /* Calculate table index by multiplying r with table scale and truncate to integer */
1333 rt = _mm256_mul_ps(r31,vftabscale);
1334 vfitab = _mm256_cvttps_epi32(rt);
1335 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1336 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1337 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1338 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1339 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1340 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1342 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1343 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1344 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1345 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1346 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1347 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1348 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1349 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1350 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1351 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1352 Heps = _mm256_mul_ps(vfeps,H);
1353 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1354 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1355 velec = _mm256_mul_ps(qq31,VV);
1356 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1357 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq31,FF),_mm256_mul_ps(vftabscale,rinv31)));
1359 /* Update potential sum for this i atom from the interaction with this j atom. */
1360 velec = _mm256_andnot_ps(dummy_mask,velec);
1361 velecsum = _mm256_add_ps(velecsum,velec);
1365 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1367 /* Calculate temporary vectorial force */
1368 tx = _mm256_mul_ps(fscal,dx31);
1369 ty = _mm256_mul_ps(fscal,dy31);
1370 tz = _mm256_mul_ps(fscal,dz31);
1372 /* Update vectorial force */
1373 fix3 = _mm256_add_ps(fix3,tx);
1374 fiy3 = _mm256_add_ps(fiy3,ty);
1375 fiz3 = _mm256_add_ps(fiz3,tz);
1377 fjx1 = _mm256_add_ps(fjx1,tx);
1378 fjy1 = _mm256_add_ps(fjy1,ty);
1379 fjz1 = _mm256_add_ps(fjz1,tz);
1381 /**************************
1382 * CALCULATE INTERACTIONS *
1383 **************************/
1385 r32 = _mm256_mul_ps(rsq32,rinv32);
1386 r32 = _mm256_andnot_ps(dummy_mask,r32);
1388 /* Calculate table index by multiplying r with table scale and truncate to integer */
1389 rt = _mm256_mul_ps(r32,vftabscale);
1390 vfitab = _mm256_cvttps_epi32(rt);
1391 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1392 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1393 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1394 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1395 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1396 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1398 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1399 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1400 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1401 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1402 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1403 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1404 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1405 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1406 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1407 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1408 Heps = _mm256_mul_ps(vfeps,H);
1409 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1410 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1411 velec = _mm256_mul_ps(qq32,VV);
1412 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1413 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq32,FF),_mm256_mul_ps(vftabscale,rinv32)));
1415 /* Update potential sum for this i atom from the interaction with this j atom. */
1416 velec = _mm256_andnot_ps(dummy_mask,velec);
1417 velecsum = _mm256_add_ps(velecsum,velec);
1421 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1423 /* Calculate temporary vectorial force */
1424 tx = _mm256_mul_ps(fscal,dx32);
1425 ty = _mm256_mul_ps(fscal,dy32);
1426 tz = _mm256_mul_ps(fscal,dz32);
1428 /* Update vectorial force */
1429 fix3 = _mm256_add_ps(fix3,tx);
1430 fiy3 = _mm256_add_ps(fiy3,ty);
1431 fiz3 = _mm256_add_ps(fiz3,tz);
1433 fjx2 = _mm256_add_ps(fjx2,tx);
1434 fjy2 = _mm256_add_ps(fjy2,ty);
1435 fjz2 = _mm256_add_ps(fjz2,tz);
1437 /**************************
1438 * CALCULATE INTERACTIONS *
1439 **************************/
1441 r33 = _mm256_mul_ps(rsq33,rinv33);
1442 r33 = _mm256_andnot_ps(dummy_mask,r33);
1444 /* Calculate table index by multiplying r with table scale and truncate to integer */
1445 rt = _mm256_mul_ps(r33,vftabscale);
1446 vfitab = _mm256_cvttps_epi32(rt);
1447 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1448 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1449 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1450 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1451 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1452 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1454 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1455 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1456 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1457 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1458 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1459 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1460 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1461 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1462 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1463 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1464 Heps = _mm256_mul_ps(vfeps,H);
1465 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1466 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1467 velec = _mm256_mul_ps(qq33,VV);
1468 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1469 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq33,FF),_mm256_mul_ps(vftabscale,rinv33)));
1471 /* Update potential sum for this i atom from the interaction with this j atom. */
1472 velec = _mm256_andnot_ps(dummy_mask,velec);
1473 velecsum = _mm256_add_ps(velecsum,velec);
1477 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1479 /* Calculate temporary vectorial force */
1480 tx = _mm256_mul_ps(fscal,dx33);
1481 ty = _mm256_mul_ps(fscal,dy33);
1482 tz = _mm256_mul_ps(fscal,dz33);
1484 /* Update vectorial force */
1485 fix3 = _mm256_add_ps(fix3,tx);
1486 fiy3 = _mm256_add_ps(fiy3,ty);
1487 fiz3 = _mm256_add_ps(fiz3,tz);
1489 fjx3 = _mm256_add_ps(fjx3,tx);
1490 fjy3 = _mm256_add_ps(fjy3,ty);
1491 fjz3 = _mm256_add_ps(fjz3,tz);
1493 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
1494 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
1495 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
1496 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
1497 fjptrE = (jnrlistE>=0) ? f+j_coord_offsetE : scratch;
1498 fjptrF = (jnrlistF>=0) ? f+j_coord_offsetF : scratch;
1499 fjptrG = (jnrlistG>=0) ? f+j_coord_offsetG : scratch;
1500 fjptrH = (jnrlistH>=0) ? f+j_coord_offsetH : scratch;
1502 gmx_mm256_decrement_4rvec_8ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,fjptrE,fjptrF,fjptrG,fjptrH,
1503 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,
1504 fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
1506 /* Inner loop uses 431 flops */
1509 /* End of innermost loop */
1511 gmx_mm256_update_iforce_4atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
1512 f+i_coord_offset,fshift+i_shift_offset);
1515 /* Update potential energies */
1516 gmx_mm256_update_1pot_ps(velecsum,kernel_data->energygrp_elec+ggid);
1517 gmx_mm256_update_1pot_ps(vvdwsum,kernel_data->energygrp_vdw+ggid);
1519 /* Increment number of inner iterations */
1520 inneriter += j_index_end - j_index_start;
1522 /* Outer loop uses 26 flops */
1525 /* Increment number of outer iterations */
1528 /* Update outer/inner flops */
1530 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W4W4_VF,outeriter*26 + inneriter*431);
1533 * Gromacs nonbonded kernel: nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_F_avx_256_single
1534 * Electrostatics interaction: CubicSplineTable
1535 * VdW interaction: LennardJones
1536 * Geometry: Water4-Water4
1537 * Calculate force/pot: Force
1540 nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_F_avx_256_single
1541 (t_nblist * gmx_restrict nlist,
1542 rvec * gmx_restrict xx,
1543 rvec * gmx_restrict ff,
1544 t_forcerec * gmx_restrict fr,
1545 t_mdatoms * gmx_restrict mdatoms,
1546 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
1547 t_nrnb * gmx_restrict nrnb)
1549 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
1550 * just 0 for non-waters.
1551 * Suffixes A,B,C,D,E,F,G,H refer to j loop unrolling done with AVX, e.g. for the eight different
1552 * jnr indices corresponding to data put in the four positions in the SIMD register.
1554 int i_shift_offset,i_coord_offset,outeriter,inneriter;
1555 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1556 int jnrA,jnrB,jnrC,jnrD;
1557 int jnrE,jnrF,jnrG,jnrH;
1558 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
1559 int jnrlistE,jnrlistF,jnrlistG,jnrlistH;
1560 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
1561 int j_coord_offsetE,j_coord_offsetF,j_coord_offsetG,j_coord_offsetH;
1562 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
1563 real rcutoff_scalar;
1564 real *shiftvec,*fshift,*x,*f;
1565 real *fjptrA,*fjptrB,*fjptrC,*fjptrD,*fjptrE,*fjptrF,*fjptrG,*fjptrH;
1566 real scratch[4*DIM];
1567 __m256 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
1568 real * vdwioffsetptr0;
1569 __m256 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
1570 real * vdwioffsetptr1;
1571 __m256 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1572 real * vdwioffsetptr2;
1573 __m256 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1574 real * vdwioffsetptr3;
1575 __m256 ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
1576 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D,vdwjidx0E,vdwjidx0F,vdwjidx0G,vdwjidx0H;
1577 __m256 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
1578 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D,vdwjidx1E,vdwjidx1F,vdwjidx1G,vdwjidx1H;
1579 __m256 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1580 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D,vdwjidx2E,vdwjidx2F,vdwjidx2G,vdwjidx2H;
1581 __m256 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1582 int vdwjidx3A,vdwjidx3B,vdwjidx3C,vdwjidx3D,vdwjidx3E,vdwjidx3F,vdwjidx3G,vdwjidx3H;
1583 __m256 jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
1584 __m256 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
1585 __m256 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1586 __m256 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1587 __m256 dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
1588 __m256 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1589 __m256 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1590 __m256 dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
1591 __m256 dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
1592 __m256 dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
1593 __m256 dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
1594 __m256 velec,felec,velecsum,facel,crf,krf,krf2;
1597 __m256 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
1600 __m256 one_sixth = _mm256_set1_ps(1.0/6.0);
1601 __m256 one_twelfth = _mm256_set1_ps(1.0/12.0);
1603 __m128i vfitab_lo,vfitab_hi;
1604 __m128i ifour = _mm_set1_epi32(4);
1605 __m256 rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
1607 __m256 dummy_mask,cutoff_mask;
1608 __m256 signbit = _mm256_castsi256_ps( _mm256_set1_epi32(0x80000000) );
1609 __m256 one = _mm256_set1_ps(1.0);
1610 __m256 two = _mm256_set1_ps(2.0);
1616 jindex = nlist->jindex;
1618 shiftidx = nlist->shift;
1620 shiftvec = fr->shift_vec[0];
1621 fshift = fr->fshift[0];
1622 facel = _mm256_set1_ps(fr->epsfac);
1623 charge = mdatoms->chargeA;
1624 nvdwtype = fr->ntype;
1625 vdwparam = fr->nbfp;
1626 vdwtype = mdatoms->typeA;
1628 vftab = kernel_data->table_elec->data;
1629 vftabscale = _mm256_set1_ps(kernel_data->table_elec->scale);
1631 /* Setup water-specific parameters */
1632 inr = nlist->iinr[0];
1633 iq1 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+1]));
1634 iq2 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+2]));
1635 iq3 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+3]));
1636 vdwioffsetptr0 = vdwparam+2*nvdwtype*vdwtype[inr+0];
1638 jq1 = _mm256_set1_ps(charge[inr+1]);
1639 jq2 = _mm256_set1_ps(charge[inr+2]);
1640 jq3 = _mm256_set1_ps(charge[inr+3]);
1641 vdwjidx0A = 2*vdwtype[inr+0];
1642 c6_00 = _mm256_set1_ps(vdwioffsetptr0[vdwjidx0A]);
1643 c12_00 = _mm256_set1_ps(vdwioffsetptr0[vdwjidx0A+1]);
1644 qq11 = _mm256_mul_ps(iq1,jq1);
1645 qq12 = _mm256_mul_ps(iq1,jq2);
1646 qq13 = _mm256_mul_ps(iq1,jq3);
1647 qq21 = _mm256_mul_ps(iq2,jq1);
1648 qq22 = _mm256_mul_ps(iq2,jq2);
1649 qq23 = _mm256_mul_ps(iq2,jq3);
1650 qq31 = _mm256_mul_ps(iq3,jq1);
1651 qq32 = _mm256_mul_ps(iq3,jq2);
1652 qq33 = _mm256_mul_ps(iq3,jq3);
1654 /* Avoid stupid compiler warnings */
1655 jnrA = jnrB = jnrC = jnrD = jnrE = jnrF = jnrG = jnrH = 0;
1656 j_coord_offsetA = 0;
1657 j_coord_offsetB = 0;
1658 j_coord_offsetC = 0;
1659 j_coord_offsetD = 0;
1660 j_coord_offsetE = 0;
1661 j_coord_offsetF = 0;
1662 j_coord_offsetG = 0;
1663 j_coord_offsetH = 0;
1668 for(iidx=0;iidx<4*DIM;iidx++)
1670 scratch[iidx] = 0.0;
1673 /* Start outer loop over neighborlists */
1674 for(iidx=0; iidx<nri; iidx++)
1676 /* Load shift vector for this list */
1677 i_shift_offset = DIM*shiftidx[iidx];
1679 /* Load limits for loop over neighbors */
1680 j_index_start = jindex[iidx];
1681 j_index_end = jindex[iidx+1];
1683 /* Get outer coordinate index */
1685 i_coord_offset = DIM*inr;
1687 /* Load i particle coords and add shift vector */
1688 gmx_mm256_load_shift_and_4rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset,
1689 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
1691 fix0 = _mm256_setzero_ps();
1692 fiy0 = _mm256_setzero_ps();
1693 fiz0 = _mm256_setzero_ps();
1694 fix1 = _mm256_setzero_ps();
1695 fiy1 = _mm256_setzero_ps();
1696 fiz1 = _mm256_setzero_ps();
1697 fix2 = _mm256_setzero_ps();
1698 fiy2 = _mm256_setzero_ps();
1699 fiz2 = _mm256_setzero_ps();
1700 fix3 = _mm256_setzero_ps();
1701 fiy3 = _mm256_setzero_ps();
1702 fiz3 = _mm256_setzero_ps();
1704 /* Start inner kernel loop */
1705 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+7]>=0; jidx+=8)
1708 /* Get j neighbor index, and coordinate index */
1710 jnrB = jjnr[jidx+1];
1711 jnrC = jjnr[jidx+2];
1712 jnrD = jjnr[jidx+3];
1713 jnrE = jjnr[jidx+4];
1714 jnrF = jjnr[jidx+5];
1715 jnrG = jjnr[jidx+6];
1716 jnrH = jjnr[jidx+7];
1717 j_coord_offsetA = DIM*jnrA;
1718 j_coord_offsetB = DIM*jnrB;
1719 j_coord_offsetC = DIM*jnrC;
1720 j_coord_offsetD = DIM*jnrD;
1721 j_coord_offsetE = DIM*jnrE;
1722 j_coord_offsetF = DIM*jnrF;
1723 j_coord_offsetG = DIM*jnrG;
1724 j_coord_offsetH = DIM*jnrH;
1726 /* load j atom coordinates */
1727 gmx_mm256_load_4rvec_8ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1728 x+j_coord_offsetC,x+j_coord_offsetD,
1729 x+j_coord_offsetE,x+j_coord_offsetF,
1730 x+j_coord_offsetG,x+j_coord_offsetH,
1731 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,
1732 &jy2,&jz2,&jx3,&jy3,&jz3);
1734 /* Calculate displacement vector */
1735 dx00 = _mm256_sub_ps(ix0,jx0);
1736 dy00 = _mm256_sub_ps(iy0,jy0);
1737 dz00 = _mm256_sub_ps(iz0,jz0);
1738 dx11 = _mm256_sub_ps(ix1,jx1);
1739 dy11 = _mm256_sub_ps(iy1,jy1);
1740 dz11 = _mm256_sub_ps(iz1,jz1);
1741 dx12 = _mm256_sub_ps(ix1,jx2);
1742 dy12 = _mm256_sub_ps(iy1,jy2);
1743 dz12 = _mm256_sub_ps(iz1,jz2);
1744 dx13 = _mm256_sub_ps(ix1,jx3);
1745 dy13 = _mm256_sub_ps(iy1,jy3);
1746 dz13 = _mm256_sub_ps(iz1,jz3);
1747 dx21 = _mm256_sub_ps(ix2,jx1);
1748 dy21 = _mm256_sub_ps(iy2,jy1);
1749 dz21 = _mm256_sub_ps(iz2,jz1);
1750 dx22 = _mm256_sub_ps(ix2,jx2);
1751 dy22 = _mm256_sub_ps(iy2,jy2);
1752 dz22 = _mm256_sub_ps(iz2,jz2);
1753 dx23 = _mm256_sub_ps(ix2,jx3);
1754 dy23 = _mm256_sub_ps(iy2,jy3);
1755 dz23 = _mm256_sub_ps(iz2,jz3);
1756 dx31 = _mm256_sub_ps(ix3,jx1);
1757 dy31 = _mm256_sub_ps(iy3,jy1);
1758 dz31 = _mm256_sub_ps(iz3,jz1);
1759 dx32 = _mm256_sub_ps(ix3,jx2);
1760 dy32 = _mm256_sub_ps(iy3,jy2);
1761 dz32 = _mm256_sub_ps(iz3,jz2);
1762 dx33 = _mm256_sub_ps(ix3,jx3);
1763 dy33 = _mm256_sub_ps(iy3,jy3);
1764 dz33 = _mm256_sub_ps(iz3,jz3);
1766 /* Calculate squared distance and things based on it */
1767 rsq00 = gmx_mm256_calc_rsq_ps(dx00,dy00,dz00);
1768 rsq11 = gmx_mm256_calc_rsq_ps(dx11,dy11,dz11);
1769 rsq12 = gmx_mm256_calc_rsq_ps(dx12,dy12,dz12);
1770 rsq13 = gmx_mm256_calc_rsq_ps(dx13,dy13,dz13);
1771 rsq21 = gmx_mm256_calc_rsq_ps(dx21,dy21,dz21);
1772 rsq22 = gmx_mm256_calc_rsq_ps(dx22,dy22,dz22);
1773 rsq23 = gmx_mm256_calc_rsq_ps(dx23,dy23,dz23);
1774 rsq31 = gmx_mm256_calc_rsq_ps(dx31,dy31,dz31);
1775 rsq32 = gmx_mm256_calc_rsq_ps(dx32,dy32,dz32);
1776 rsq33 = gmx_mm256_calc_rsq_ps(dx33,dy33,dz33);
1778 rinv11 = gmx_mm256_invsqrt_ps(rsq11);
1779 rinv12 = gmx_mm256_invsqrt_ps(rsq12);
1780 rinv13 = gmx_mm256_invsqrt_ps(rsq13);
1781 rinv21 = gmx_mm256_invsqrt_ps(rsq21);
1782 rinv22 = gmx_mm256_invsqrt_ps(rsq22);
1783 rinv23 = gmx_mm256_invsqrt_ps(rsq23);
1784 rinv31 = gmx_mm256_invsqrt_ps(rsq31);
1785 rinv32 = gmx_mm256_invsqrt_ps(rsq32);
1786 rinv33 = gmx_mm256_invsqrt_ps(rsq33);
1788 rinvsq00 = gmx_mm256_inv_ps(rsq00);
1790 fjx0 = _mm256_setzero_ps();
1791 fjy0 = _mm256_setzero_ps();
1792 fjz0 = _mm256_setzero_ps();
1793 fjx1 = _mm256_setzero_ps();
1794 fjy1 = _mm256_setzero_ps();
1795 fjz1 = _mm256_setzero_ps();
1796 fjx2 = _mm256_setzero_ps();
1797 fjy2 = _mm256_setzero_ps();
1798 fjz2 = _mm256_setzero_ps();
1799 fjx3 = _mm256_setzero_ps();
1800 fjy3 = _mm256_setzero_ps();
1801 fjz3 = _mm256_setzero_ps();
1803 /**************************
1804 * CALCULATE INTERACTIONS *
1805 **************************/
1807 /* LENNARD-JONES DISPERSION/REPULSION */
1809 rinvsix = _mm256_mul_ps(_mm256_mul_ps(rinvsq00,rinvsq00),rinvsq00);
1810 fvdw = _mm256_mul_ps(_mm256_sub_ps(_mm256_mul_ps(c12_00,rinvsix),c6_00),_mm256_mul_ps(rinvsix,rinvsq00));
1814 /* Calculate temporary vectorial force */
1815 tx = _mm256_mul_ps(fscal,dx00);
1816 ty = _mm256_mul_ps(fscal,dy00);
1817 tz = _mm256_mul_ps(fscal,dz00);
1819 /* Update vectorial force */
1820 fix0 = _mm256_add_ps(fix0,tx);
1821 fiy0 = _mm256_add_ps(fiy0,ty);
1822 fiz0 = _mm256_add_ps(fiz0,tz);
1824 fjx0 = _mm256_add_ps(fjx0,tx);
1825 fjy0 = _mm256_add_ps(fjy0,ty);
1826 fjz0 = _mm256_add_ps(fjz0,tz);
1828 /**************************
1829 * CALCULATE INTERACTIONS *
1830 **************************/
1832 r11 = _mm256_mul_ps(rsq11,rinv11);
1834 /* Calculate table index by multiplying r with table scale and truncate to integer */
1835 rt = _mm256_mul_ps(r11,vftabscale);
1836 vfitab = _mm256_cvttps_epi32(rt);
1837 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1838 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1839 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1840 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1841 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1842 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1844 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1845 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1846 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1847 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1848 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1849 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1850 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1851 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1852 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1853 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1854 Heps = _mm256_mul_ps(vfeps,H);
1855 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1856 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1857 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq11,FF),_mm256_mul_ps(vftabscale,rinv11)));
1861 /* Calculate temporary vectorial force */
1862 tx = _mm256_mul_ps(fscal,dx11);
1863 ty = _mm256_mul_ps(fscal,dy11);
1864 tz = _mm256_mul_ps(fscal,dz11);
1866 /* Update vectorial force */
1867 fix1 = _mm256_add_ps(fix1,tx);
1868 fiy1 = _mm256_add_ps(fiy1,ty);
1869 fiz1 = _mm256_add_ps(fiz1,tz);
1871 fjx1 = _mm256_add_ps(fjx1,tx);
1872 fjy1 = _mm256_add_ps(fjy1,ty);
1873 fjz1 = _mm256_add_ps(fjz1,tz);
1875 /**************************
1876 * CALCULATE INTERACTIONS *
1877 **************************/
1879 r12 = _mm256_mul_ps(rsq12,rinv12);
1881 /* Calculate table index by multiplying r with table scale and truncate to integer */
1882 rt = _mm256_mul_ps(r12,vftabscale);
1883 vfitab = _mm256_cvttps_epi32(rt);
1884 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1885 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1886 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1887 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1888 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1889 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1891 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1892 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1893 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1894 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1895 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1896 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1897 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1898 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1899 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1900 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1901 Heps = _mm256_mul_ps(vfeps,H);
1902 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1903 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1904 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq12,FF),_mm256_mul_ps(vftabscale,rinv12)));
1908 /* Calculate temporary vectorial force */
1909 tx = _mm256_mul_ps(fscal,dx12);
1910 ty = _mm256_mul_ps(fscal,dy12);
1911 tz = _mm256_mul_ps(fscal,dz12);
1913 /* Update vectorial force */
1914 fix1 = _mm256_add_ps(fix1,tx);
1915 fiy1 = _mm256_add_ps(fiy1,ty);
1916 fiz1 = _mm256_add_ps(fiz1,tz);
1918 fjx2 = _mm256_add_ps(fjx2,tx);
1919 fjy2 = _mm256_add_ps(fjy2,ty);
1920 fjz2 = _mm256_add_ps(fjz2,tz);
1922 /**************************
1923 * CALCULATE INTERACTIONS *
1924 **************************/
1926 r13 = _mm256_mul_ps(rsq13,rinv13);
1928 /* Calculate table index by multiplying r with table scale and truncate to integer */
1929 rt = _mm256_mul_ps(r13,vftabscale);
1930 vfitab = _mm256_cvttps_epi32(rt);
1931 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1932 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1933 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1934 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1935 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1936 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1938 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1939 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1940 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1941 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1942 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1943 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1944 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1945 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1946 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1947 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1948 Heps = _mm256_mul_ps(vfeps,H);
1949 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1950 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1951 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq13,FF),_mm256_mul_ps(vftabscale,rinv13)));
1955 /* Calculate temporary vectorial force */
1956 tx = _mm256_mul_ps(fscal,dx13);
1957 ty = _mm256_mul_ps(fscal,dy13);
1958 tz = _mm256_mul_ps(fscal,dz13);
1960 /* Update vectorial force */
1961 fix1 = _mm256_add_ps(fix1,tx);
1962 fiy1 = _mm256_add_ps(fiy1,ty);
1963 fiz1 = _mm256_add_ps(fiz1,tz);
1965 fjx3 = _mm256_add_ps(fjx3,tx);
1966 fjy3 = _mm256_add_ps(fjy3,ty);
1967 fjz3 = _mm256_add_ps(fjz3,tz);
1969 /**************************
1970 * CALCULATE INTERACTIONS *
1971 **************************/
1973 r21 = _mm256_mul_ps(rsq21,rinv21);
1975 /* Calculate table index by multiplying r with table scale and truncate to integer */
1976 rt = _mm256_mul_ps(r21,vftabscale);
1977 vfitab = _mm256_cvttps_epi32(rt);
1978 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1979 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1980 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1981 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1982 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1983 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1985 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1986 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1987 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1988 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1989 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1990 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1991 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1992 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1993 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1994 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1995 Heps = _mm256_mul_ps(vfeps,H);
1996 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1997 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1998 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq21,FF),_mm256_mul_ps(vftabscale,rinv21)));
2002 /* Calculate temporary vectorial force */
2003 tx = _mm256_mul_ps(fscal,dx21);
2004 ty = _mm256_mul_ps(fscal,dy21);
2005 tz = _mm256_mul_ps(fscal,dz21);
2007 /* Update vectorial force */
2008 fix2 = _mm256_add_ps(fix2,tx);
2009 fiy2 = _mm256_add_ps(fiy2,ty);
2010 fiz2 = _mm256_add_ps(fiz2,tz);
2012 fjx1 = _mm256_add_ps(fjx1,tx);
2013 fjy1 = _mm256_add_ps(fjy1,ty);
2014 fjz1 = _mm256_add_ps(fjz1,tz);
2016 /**************************
2017 * CALCULATE INTERACTIONS *
2018 **************************/
2020 r22 = _mm256_mul_ps(rsq22,rinv22);
2022 /* Calculate table index by multiplying r with table scale and truncate to integer */
2023 rt = _mm256_mul_ps(r22,vftabscale);
2024 vfitab = _mm256_cvttps_epi32(rt);
2025 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2026 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2027 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2028 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2029 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2030 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2032 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2033 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2034 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2035 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2036 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2037 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2038 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2039 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2040 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2041 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2042 Heps = _mm256_mul_ps(vfeps,H);
2043 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2044 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2045 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq22,FF),_mm256_mul_ps(vftabscale,rinv22)));
2049 /* Calculate temporary vectorial force */
2050 tx = _mm256_mul_ps(fscal,dx22);
2051 ty = _mm256_mul_ps(fscal,dy22);
2052 tz = _mm256_mul_ps(fscal,dz22);
2054 /* Update vectorial force */
2055 fix2 = _mm256_add_ps(fix2,tx);
2056 fiy2 = _mm256_add_ps(fiy2,ty);
2057 fiz2 = _mm256_add_ps(fiz2,tz);
2059 fjx2 = _mm256_add_ps(fjx2,tx);
2060 fjy2 = _mm256_add_ps(fjy2,ty);
2061 fjz2 = _mm256_add_ps(fjz2,tz);
2063 /**************************
2064 * CALCULATE INTERACTIONS *
2065 **************************/
2067 r23 = _mm256_mul_ps(rsq23,rinv23);
2069 /* Calculate table index by multiplying r with table scale and truncate to integer */
2070 rt = _mm256_mul_ps(r23,vftabscale);
2071 vfitab = _mm256_cvttps_epi32(rt);
2072 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2073 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2074 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2075 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2076 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2077 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2079 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2080 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2081 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2082 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2083 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2084 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2085 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2086 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2087 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2088 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2089 Heps = _mm256_mul_ps(vfeps,H);
2090 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2091 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2092 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq23,FF),_mm256_mul_ps(vftabscale,rinv23)));
2096 /* Calculate temporary vectorial force */
2097 tx = _mm256_mul_ps(fscal,dx23);
2098 ty = _mm256_mul_ps(fscal,dy23);
2099 tz = _mm256_mul_ps(fscal,dz23);
2101 /* Update vectorial force */
2102 fix2 = _mm256_add_ps(fix2,tx);
2103 fiy2 = _mm256_add_ps(fiy2,ty);
2104 fiz2 = _mm256_add_ps(fiz2,tz);
2106 fjx3 = _mm256_add_ps(fjx3,tx);
2107 fjy3 = _mm256_add_ps(fjy3,ty);
2108 fjz3 = _mm256_add_ps(fjz3,tz);
2110 /**************************
2111 * CALCULATE INTERACTIONS *
2112 **************************/
2114 r31 = _mm256_mul_ps(rsq31,rinv31);
2116 /* Calculate table index by multiplying r with table scale and truncate to integer */
2117 rt = _mm256_mul_ps(r31,vftabscale);
2118 vfitab = _mm256_cvttps_epi32(rt);
2119 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2120 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2121 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2122 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2123 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2124 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2126 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2127 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2128 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2129 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2130 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2131 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2132 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2133 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2134 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2135 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2136 Heps = _mm256_mul_ps(vfeps,H);
2137 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2138 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2139 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq31,FF),_mm256_mul_ps(vftabscale,rinv31)));
2143 /* Calculate temporary vectorial force */
2144 tx = _mm256_mul_ps(fscal,dx31);
2145 ty = _mm256_mul_ps(fscal,dy31);
2146 tz = _mm256_mul_ps(fscal,dz31);
2148 /* Update vectorial force */
2149 fix3 = _mm256_add_ps(fix3,tx);
2150 fiy3 = _mm256_add_ps(fiy3,ty);
2151 fiz3 = _mm256_add_ps(fiz3,tz);
2153 fjx1 = _mm256_add_ps(fjx1,tx);
2154 fjy1 = _mm256_add_ps(fjy1,ty);
2155 fjz1 = _mm256_add_ps(fjz1,tz);
2157 /**************************
2158 * CALCULATE INTERACTIONS *
2159 **************************/
2161 r32 = _mm256_mul_ps(rsq32,rinv32);
2163 /* Calculate table index by multiplying r with table scale and truncate to integer */
2164 rt = _mm256_mul_ps(r32,vftabscale);
2165 vfitab = _mm256_cvttps_epi32(rt);
2166 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2167 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2168 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2169 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2170 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2171 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2173 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2174 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2175 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2176 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2177 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2178 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2179 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2180 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2181 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2182 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2183 Heps = _mm256_mul_ps(vfeps,H);
2184 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2185 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2186 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq32,FF),_mm256_mul_ps(vftabscale,rinv32)));
2190 /* Calculate temporary vectorial force */
2191 tx = _mm256_mul_ps(fscal,dx32);
2192 ty = _mm256_mul_ps(fscal,dy32);
2193 tz = _mm256_mul_ps(fscal,dz32);
2195 /* Update vectorial force */
2196 fix3 = _mm256_add_ps(fix3,tx);
2197 fiy3 = _mm256_add_ps(fiy3,ty);
2198 fiz3 = _mm256_add_ps(fiz3,tz);
2200 fjx2 = _mm256_add_ps(fjx2,tx);
2201 fjy2 = _mm256_add_ps(fjy2,ty);
2202 fjz2 = _mm256_add_ps(fjz2,tz);
2204 /**************************
2205 * CALCULATE INTERACTIONS *
2206 **************************/
2208 r33 = _mm256_mul_ps(rsq33,rinv33);
2210 /* Calculate table index by multiplying r with table scale and truncate to integer */
2211 rt = _mm256_mul_ps(r33,vftabscale);
2212 vfitab = _mm256_cvttps_epi32(rt);
2213 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2214 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2215 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2216 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2217 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2218 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2220 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2221 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2222 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2223 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2224 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2225 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2226 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2227 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2228 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2229 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2230 Heps = _mm256_mul_ps(vfeps,H);
2231 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2232 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2233 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq33,FF),_mm256_mul_ps(vftabscale,rinv33)));
2237 /* Calculate temporary vectorial force */
2238 tx = _mm256_mul_ps(fscal,dx33);
2239 ty = _mm256_mul_ps(fscal,dy33);
2240 tz = _mm256_mul_ps(fscal,dz33);
2242 /* Update vectorial force */
2243 fix3 = _mm256_add_ps(fix3,tx);
2244 fiy3 = _mm256_add_ps(fiy3,ty);
2245 fiz3 = _mm256_add_ps(fiz3,tz);
2247 fjx3 = _mm256_add_ps(fjx3,tx);
2248 fjy3 = _mm256_add_ps(fjy3,ty);
2249 fjz3 = _mm256_add_ps(fjz3,tz);
2251 fjptrA = f+j_coord_offsetA;
2252 fjptrB = f+j_coord_offsetB;
2253 fjptrC = f+j_coord_offsetC;
2254 fjptrD = f+j_coord_offsetD;
2255 fjptrE = f+j_coord_offsetE;
2256 fjptrF = f+j_coord_offsetF;
2257 fjptrG = f+j_coord_offsetG;
2258 fjptrH = f+j_coord_offsetH;
2260 gmx_mm256_decrement_4rvec_8ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,fjptrE,fjptrF,fjptrG,fjptrH,
2261 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,
2262 fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
2264 /* Inner loop uses 381 flops */
2267 if(jidx<j_index_end)
2270 /* Get j neighbor index, and coordinate index */
2271 jnrlistA = jjnr[jidx];
2272 jnrlistB = jjnr[jidx+1];
2273 jnrlistC = jjnr[jidx+2];
2274 jnrlistD = jjnr[jidx+3];
2275 jnrlistE = jjnr[jidx+4];
2276 jnrlistF = jjnr[jidx+5];
2277 jnrlistG = jjnr[jidx+6];
2278 jnrlistH = jjnr[jidx+7];
2279 /* Sign of each element will be negative for non-real atoms.
2280 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
2281 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
2283 dummy_mask = gmx_mm256_set_m128(gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx+4)),_mm_setzero_si128())),
2284 gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128())));
2286 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
2287 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
2288 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
2289 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
2290 jnrE = (jnrlistE>=0) ? jnrlistE : 0;
2291 jnrF = (jnrlistF>=0) ? jnrlistF : 0;
2292 jnrG = (jnrlistG>=0) ? jnrlistG : 0;
2293 jnrH = (jnrlistH>=0) ? jnrlistH : 0;
2294 j_coord_offsetA = DIM*jnrA;
2295 j_coord_offsetB = DIM*jnrB;
2296 j_coord_offsetC = DIM*jnrC;
2297 j_coord_offsetD = DIM*jnrD;
2298 j_coord_offsetE = DIM*jnrE;
2299 j_coord_offsetF = DIM*jnrF;
2300 j_coord_offsetG = DIM*jnrG;
2301 j_coord_offsetH = DIM*jnrH;
2303 /* load j atom coordinates */
2304 gmx_mm256_load_4rvec_8ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
2305 x+j_coord_offsetC,x+j_coord_offsetD,
2306 x+j_coord_offsetE,x+j_coord_offsetF,
2307 x+j_coord_offsetG,x+j_coord_offsetH,
2308 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,
2309 &jy2,&jz2,&jx3,&jy3,&jz3);
2311 /* Calculate displacement vector */
2312 dx00 = _mm256_sub_ps(ix0,jx0);
2313 dy00 = _mm256_sub_ps(iy0,jy0);
2314 dz00 = _mm256_sub_ps(iz0,jz0);
2315 dx11 = _mm256_sub_ps(ix1,jx1);
2316 dy11 = _mm256_sub_ps(iy1,jy1);
2317 dz11 = _mm256_sub_ps(iz1,jz1);
2318 dx12 = _mm256_sub_ps(ix1,jx2);
2319 dy12 = _mm256_sub_ps(iy1,jy2);
2320 dz12 = _mm256_sub_ps(iz1,jz2);
2321 dx13 = _mm256_sub_ps(ix1,jx3);
2322 dy13 = _mm256_sub_ps(iy1,jy3);
2323 dz13 = _mm256_sub_ps(iz1,jz3);
2324 dx21 = _mm256_sub_ps(ix2,jx1);
2325 dy21 = _mm256_sub_ps(iy2,jy1);
2326 dz21 = _mm256_sub_ps(iz2,jz1);
2327 dx22 = _mm256_sub_ps(ix2,jx2);
2328 dy22 = _mm256_sub_ps(iy2,jy2);
2329 dz22 = _mm256_sub_ps(iz2,jz2);
2330 dx23 = _mm256_sub_ps(ix2,jx3);
2331 dy23 = _mm256_sub_ps(iy2,jy3);
2332 dz23 = _mm256_sub_ps(iz2,jz3);
2333 dx31 = _mm256_sub_ps(ix3,jx1);
2334 dy31 = _mm256_sub_ps(iy3,jy1);
2335 dz31 = _mm256_sub_ps(iz3,jz1);
2336 dx32 = _mm256_sub_ps(ix3,jx2);
2337 dy32 = _mm256_sub_ps(iy3,jy2);
2338 dz32 = _mm256_sub_ps(iz3,jz2);
2339 dx33 = _mm256_sub_ps(ix3,jx3);
2340 dy33 = _mm256_sub_ps(iy3,jy3);
2341 dz33 = _mm256_sub_ps(iz3,jz3);
2343 /* Calculate squared distance and things based on it */
2344 rsq00 = gmx_mm256_calc_rsq_ps(dx00,dy00,dz00);
2345 rsq11 = gmx_mm256_calc_rsq_ps(dx11,dy11,dz11);
2346 rsq12 = gmx_mm256_calc_rsq_ps(dx12,dy12,dz12);
2347 rsq13 = gmx_mm256_calc_rsq_ps(dx13,dy13,dz13);
2348 rsq21 = gmx_mm256_calc_rsq_ps(dx21,dy21,dz21);
2349 rsq22 = gmx_mm256_calc_rsq_ps(dx22,dy22,dz22);
2350 rsq23 = gmx_mm256_calc_rsq_ps(dx23,dy23,dz23);
2351 rsq31 = gmx_mm256_calc_rsq_ps(dx31,dy31,dz31);
2352 rsq32 = gmx_mm256_calc_rsq_ps(dx32,dy32,dz32);
2353 rsq33 = gmx_mm256_calc_rsq_ps(dx33,dy33,dz33);
2355 rinv11 = gmx_mm256_invsqrt_ps(rsq11);
2356 rinv12 = gmx_mm256_invsqrt_ps(rsq12);
2357 rinv13 = gmx_mm256_invsqrt_ps(rsq13);
2358 rinv21 = gmx_mm256_invsqrt_ps(rsq21);
2359 rinv22 = gmx_mm256_invsqrt_ps(rsq22);
2360 rinv23 = gmx_mm256_invsqrt_ps(rsq23);
2361 rinv31 = gmx_mm256_invsqrt_ps(rsq31);
2362 rinv32 = gmx_mm256_invsqrt_ps(rsq32);
2363 rinv33 = gmx_mm256_invsqrt_ps(rsq33);
2365 rinvsq00 = gmx_mm256_inv_ps(rsq00);
2367 fjx0 = _mm256_setzero_ps();
2368 fjy0 = _mm256_setzero_ps();
2369 fjz0 = _mm256_setzero_ps();
2370 fjx1 = _mm256_setzero_ps();
2371 fjy1 = _mm256_setzero_ps();
2372 fjz1 = _mm256_setzero_ps();
2373 fjx2 = _mm256_setzero_ps();
2374 fjy2 = _mm256_setzero_ps();
2375 fjz2 = _mm256_setzero_ps();
2376 fjx3 = _mm256_setzero_ps();
2377 fjy3 = _mm256_setzero_ps();
2378 fjz3 = _mm256_setzero_ps();
2380 /**************************
2381 * CALCULATE INTERACTIONS *
2382 **************************/
2384 /* LENNARD-JONES DISPERSION/REPULSION */
2386 rinvsix = _mm256_mul_ps(_mm256_mul_ps(rinvsq00,rinvsq00),rinvsq00);
2387 fvdw = _mm256_mul_ps(_mm256_sub_ps(_mm256_mul_ps(c12_00,rinvsix),c6_00),_mm256_mul_ps(rinvsix,rinvsq00));
2391 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2393 /* Calculate temporary vectorial force */
2394 tx = _mm256_mul_ps(fscal,dx00);
2395 ty = _mm256_mul_ps(fscal,dy00);
2396 tz = _mm256_mul_ps(fscal,dz00);
2398 /* Update vectorial force */
2399 fix0 = _mm256_add_ps(fix0,tx);
2400 fiy0 = _mm256_add_ps(fiy0,ty);
2401 fiz0 = _mm256_add_ps(fiz0,tz);
2403 fjx0 = _mm256_add_ps(fjx0,tx);
2404 fjy0 = _mm256_add_ps(fjy0,ty);
2405 fjz0 = _mm256_add_ps(fjz0,tz);
2407 /**************************
2408 * CALCULATE INTERACTIONS *
2409 **************************/
2411 r11 = _mm256_mul_ps(rsq11,rinv11);
2412 r11 = _mm256_andnot_ps(dummy_mask,r11);
2414 /* Calculate table index by multiplying r with table scale and truncate to integer */
2415 rt = _mm256_mul_ps(r11,vftabscale);
2416 vfitab = _mm256_cvttps_epi32(rt);
2417 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2418 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2419 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2420 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2421 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2422 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2424 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2425 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2426 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2427 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2428 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2429 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2430 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2431 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2432 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2433 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2434 Heps = _mm256_mul_ps(vfeps,H);
2435 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2436 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2437 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq11,FF),_mm256_mul_ps(vftabscale,rinv11)));
2441 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2443 /* Calculate temporary vectorial force */
2444 tx = _mm256_mul_ps(fscal,dx11);
2445 ty = _mm256_mul_ps(fscal,dy11);
2446 tz = _mm256_mul_ps(fscal,dz11);
2448 /* Update vectorial force */
2449 fix1 = _mm256_add_ps(fix1,tx);
2450 fiy1 = _mm256_add_ps(fiy1,ty);
2451 fiz1 = _mm256_add_ps(fiz1,tz);
2453 fjx1 = _mm256_add_ps(fjx1,tx);
2454 fjy1 = _mm256_add_ps(fjy1,ty);
2455 fjz1 = _mm256_add_ps(fjz1,tz);
2457 /**************************
2458 * CALCULATE INTERACTIONS *
2459 **************************/
2461 r12 = _mm256_mul_ps(rsq12,rinv12);
2462 r12 = _mm256_andnot_ps(dummy_mask,r12);
2464 /* Calculate table index by multiplying r with table scale and truncate to integer */
2465 rt = _mm256_mul_ps(r12,vftabscale);
2466 vfitab = _mm256_cvttps_epi32(rt);
2467 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2468 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2469 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2470 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2471 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2472 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2474 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2475 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2476 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2477 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2478 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2479 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2480 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2481 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2482 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2483 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2484 Heps = _mm256_mul_ps(vfeps,H);
2485 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2486 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2487 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq12,FF),_mm256_mul_ps(vftabscale,rinv12)));
2491 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2493 /* Calculate temporary vectorial force */
2494 tx = _mm256_mul_ps(fscal,dx12);
2495 ty = _mm256_mul_ps(fscal,dy12);
2496 tz = _mm256_mul_ps(fscal,dz12);
2498 /* Update vectorial force */
2499 fix1 = _mm256_add_ps(fix1,tx);
2500 fiy1 = _mm256_add_ps(fiy1,ty);
2501 fiz1 = _mm256_add_ps(fiz1,tz);
2503 fjx2 = _mm256_add_ps(fjx2,tx);
2504 fjy2 = _mm256_add_ps(fjy2,ty);
2505 fjz2 = _mm256_add_ps(fjz2,tz);
2507 /**************************
2508 * CALCULATE INTERACTIONS *
2509 **************************/
2511 r13 = _mm256_mul_ps(rsq13,rinv13);
2512 r13 = _mm256_andnot_ps(dummy_mask,r13);
2514 /* Calculate table index by multiplying r with table scale and truncate to integer */
2515 rt = _mm256_mul_ps(r13,vftabscale);
2516 vfitab = _mm256_cvttps_epi32(rt);
2517 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2518 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2519 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2520 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2521 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2522 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2524 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2525 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2526 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2527 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2528 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2529 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2530 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2531 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2532 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2533 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2534 Heps = _mm256_mul_ps(vfeps,H);
2535 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2536 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2537 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq13,FF),_mm256_mul_ps(vftabscale,rinv13)));
2541 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2543 /* Calculate temporary vectorial force */
2544 tx = _mm256_mul_ps(fscal,dx13);
2545 ty = _mm256_mul_ps(fscal,dy13);
2546 tz = _mm256_mul_ps(fscal,dz13);
2548 /* Update vectorial force */
2549 fix1 = _mm256_add_ps(fix1,tx);
2550 fiy1 = _mm256_add_ps(fiy1,ty);
2551 fiz1 = _mm256_add_ps(fiz1,tz);
2553 fjx3 = _mm256_add_ps(fjx3,tx);
2554 fjy3 = _mm256_add_ps(fjy3,ty);
2555 fjz3 = _mm256_add_ps(fjz3,tz);
2557 /**************************
2558 * CALCULATE INTERACTIONS *
2559 **************************/
2561 r21 = _mm256_mul_ps(rsq21,rinv21);
2562 r21 = _mm256_andnot_ps(dummy_mask,r21);
2564 /* Calculate table index by multiplying r with table scale and truncate to integer */
2565 rt = _mm256_mul_ps(r21,vftabscale);
2566 vfitab = _mm256_cvttps_epi32(rt);
2567 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2568 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2569 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2570 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2571 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2572 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2574 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2575 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2576 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2577 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2578 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2579 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2580 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2581 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2582 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2583 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2584 Heps = _mm256_mul_ps(vfeps,H);
2585 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2586 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2587 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq21,FF),_mm256_mul_ps(vftabscale,rinv21)));
2591 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2593 /* Calculate temporary vectorial force */
2594 tx = _mm256_mul_ps(fscal,dx21);
2595 ty = _mm256_mul_ps(fscal,dy21);
2596 tz = _mm256_mul_ps(fscal,dz21);
2598 /* Update vectorial force */
2599 fix2 = _mm256_add_ps(fix2,tx);
2600 fiy2 = _mm256_add_ps(fiy2,ty);
2601 fiz2 = _mm256_add_ps(fiz2,tz);
2603 fjx1 = _mm256_add_ps(fjx1,tx);
2604 fjy1 = _mm256_add_ps(fjy1,ty);
2605 fjz1 = _mm256_add_ps(fjz1,tz);
2607 /**************************
2608 * CALCULATE INTERACTIONS *
2609 **************************/
2611 r22 = _mm256_mul_ps(rsq22,rinv22);
2612 r22 = _mm256_andnot_ps(dummy_mask,r22);
2614 /* Calculate table index by multiplying r with table scale and truncate to integer */
2615 rt = _mm256_mul_ps(r22,vftabscale);
2616 vfitab = _mm256_cvttps_epi32(rt);
2617 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2618 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2619 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2620 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2621 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2622 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2624 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2625 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2626 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2627 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2628 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2629 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2630 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2631 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2632 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2633 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2634 Heps = _mm256_mul_ps(vfeps,H);
2635 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2636 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2637 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq22,FF),_mm256_mul_ps(vftabscale,rinv22)));
2641 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2643 /* Calculate temporary vectorial force */
2644 tx = _mm256_mul_ps(fscal,dx22);
2645 ty = _mm256_mul_ps(fscal,dy22);
2646 tz = _mm256_mul_ps(fscal,dz22);
2648 /* Update vectorial force */
2649 fix2 = _mm256_add_ps(fix2,tx);
2650 fiy2 = _mm256_add_ps(fiy2,ty);
2651 fiz2 = _mm256_add_ps(fiz2,tz);
2653 fjx2 = _mm256_add_ps(fjx2,tx);
2654 fjy2 = _mm256_add_ps(fjy2,ty);
2655 fjz2 = _mm256_add_ps(fjz2,tz);
2657 /**************************
2658 * CALCULATE INTERACTIONS *
2659 **************************/
2661 r23 = _mm256_mul_ps(rsq23,rinv23);
2662 r23 = _mm256_andnot_ps(dummy_mask,r23);
2664 /* Calculate table index by multiplying r with table scale and truncate to integer */
2665 rt = _mm256_mul_ps(r23,vftabscale);
2666 vfitab = _mm256_cvttps_epi32(rt);
2667 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2668 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2669 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2670 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2671 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2672 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2674 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2675 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2676 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2677 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2678 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2679 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2680 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2681 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2682 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2683 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2684 Heps = _mm256_mul_ps(vfeps,H);
2685 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2686 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2687 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq23,FF),_mm256_mul_ps(vftabscale,rinv23)));
2691 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2693 /* Calculate temporary vectorial force */
2694 tx = _mm256_mul_ps(fscal,dx23);
2695 ty = _mm256_mul_ps(fscal,dy23);
2696 tz = _mm256_mul_ps(fscal,dz23);
2698 /* Update vectorial force */
2699 fix2 = _mm256_add_ps(fix2,tx);
2700 fiy2 = _mm256_add_ps(fiy2,ty);
2701 fiz2 = _mm256_add_ps(fiz2,tz);
2703 fjx3 = _mm256_add_ps(fjx3,tx);
2704 fjy3 = _mm256_add_ps(fjy3,ty);
2705 fjz3 = _mm256_add_ps(fjz3,tz);
2707 /**************************
2708 * CALCULATE INTERACTIONS *
2709 **************************/
2711 r31 = _mm256_mul_ps(rsq31,rinv31);
2712 r31 = _mm256_andnot_ps(dummy_mask,r31);
2714 /* Calculate table index by multiplying r with table scale and truncate to integer */
2715 rt = _mm256_mul_ps(r31,vftabscale);
2716 vfitab = _mm256_cvttps_epi32(rt);
2717 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2718 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2719 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2720 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2721 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2722 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2724 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2725 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2726 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2727 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2728 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2729 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2730 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2731 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2732 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2733 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2734 Heps = _mm256_mul_ps(vfeps,H);
2735 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2736 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2737 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq31,FF),_mm256_mul_ps(vftabscale,rinv31)));
2741 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2743 /* Calculate temporary vectorial force */
2744 tx = _mm256_mul_ps(fscal,dx31);
2745 ty = _mm256_mul_ps(fscal,dy31);
2746 tz = _mm256_mul_ps(fscal,dz31);
2748 /* Update vectorial force */
2749 fix3 = _mm256_add_ps(fix3,tx);
2750 fiy3 = _mm256_add_ps(fiy3,ty);
2751 fiz3 = _mm256_add_ps(fiz3,tz);
2753 fjx1 = _mm256_add_ps(fjx1,tx);
2754 fjy1 = _mm256_add_ps(fjy1,ty);
2755 fjz1 = _mm256_add_ps(fjz1,tz);
2757 /**************************
2758 * CALCULATE INTERACTIONS *
2759 **************************/
2761 r32 = _mm256_mul_ps(rsq32,rinv32);
2762 r32 = _mm256_andnot_ps(dummy_mask,r32);
2764 /* Calculate table index by multiplying r with table scale and truncate to integer */
2765 rt = _mm256_mul_ps(r32,vftabscale);
2766 vfitab = _mm256_cvttps_epi32(rt);
2767 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2768 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2769 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2770 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2771 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2772 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2774 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2775 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2776 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2777 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2778 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2779 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2780 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2781 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2782 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2783 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2784 Heps = _mm256_mul_ps(vfeps,H);
2785 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2786 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2787 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq32,FF),_mm256_mul_ps(vftabscale,rinv32)));
2791 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2793 /* Calculate temporary vectorial force */
2794 tx = _mm256_mul_ps(fscal,dx32);
2795 ty = _mm256_mul_ps(fscal,dy32);
2796 tz = _mm256_mul_ps(fscal,dz32);
2798 /* Update vectorial force */
2799 fix3 = _mm256_add_ps(fix3,tx);
2800 fiy3 = _mm256_add_ps(fiy3,ty);
2801 fiz3 = _mm256_add_ps(fiz3,tz);
2803 fjx2 = _mm256_add_ps(fjx2,tx);
2804 fjy2 = _mm256_add_ps(fjy2,ty);
2805 fjz2 = _mm256_add_ps(fjz2,tz);
2807 /**************************
2808 * CALCULATE INTERACTIONS *
2809 **************************/
2811 r33 = _mm256_mul_ps(rsq33,rinv33);
2812 r33 = _mm256_andnot_ps(dummy_mask,r33);
2814 /* Calculate table index by multiplying r with table scale and truncate to integer */
2815 rt = _mm256_mul_ps(r33,vftabscale);
2816 vfitab = _mm256_cvttps_epi32(rt);
2817 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2818 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2819 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2820 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2821 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2822 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2824 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2825 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2826 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2827 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2828 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2829 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2830 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2831 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2832 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2833 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2834 Heps = _mm256_mul_ps(vfeps,H);
2835 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2836 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2837 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq33,FF),_mm256_mul_ps(vftabscale,rinv33)));
2841 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2843 /* Calculate temporary vectorial force */
2844 tx = _mm256_mul_ps(fscal,dx33);
2845 ty = _mm256_mul_ps(fscal,dy33);
2846 tz = _mm256_mul_ps(fscal,dz33);
2848 /* Update vectorial force */
2849 fix3 = _mm256_add_ps(fix3,tx);
2850 fiy3 = _mm256_add_ps(fiy3,ty);
2851 fiz3 = _mm256_add_ps(fiz3,tz);
2853 fjx3 = _mm256_add_ps(fjx3,tx);
2854 fjy3 = _mm256_add_ps(fjy3,ty);
2855 fjz3 = _mm256_add_ps(fjz3,tz);
2857 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
2858 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
2859 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
2860 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
2861 fjptrE = (jnrlistE>=0) ? f+j_coord_offsetE : scratch;
2862 fjptrF = (jnrlistF>=0) ? f+j_coord_offsetF : scratch;
2863 fjptrG = (jnrlistG>=0) ? f+j_coord_offsetG : scratch;
2864 fjptrH = (jnrlistH>=0) ? f+j_coord_offsetH : scratch;
2866 gmx_mm256_decrement_4rvec_8ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,fjptrE,fjptrF,fjptrG,fjptrH,
2867 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,
2868 fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
2870 /* Inner loop uses 390 flops */
2873 /* End of innermost loop */
2875 gmx_mm256_update_iforce_4atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
2876 f+i_coord_offset,fshift+i_shift_offset);
2878 /* Increment number of inner iterations */
2879 inneriter += j_index_end - j_index_start;
2881 /* Outer loop uses 24 flops */
2884 /* Increment number of outer iterations */
2887 /* Update outer/inner flops */
2889 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W4W4_F,outeriter*24 + inneriter*390);