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36 * Note: this file was generated by the GROMACS avx_256_single kernel generator.
44 #include "../nb_kernel.h"
45 #include "gromacs/gmxlib/nrnb.h"
47 #include "kernelutil_x86_avx_256_single.h"
50 * Gromacs nonbonded kernel: nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_VF_avx_256_single
51 * Electrostatics interaction: CubicSplineTable
52 * VdW interaction: LennardJones
53 * Geometry: Water3-Water3
54 * Calculate force/pot: PotentialAndForce
57 nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_VF_avx_256_single
58 (t_nblist * gmx_restrict nlist,
59 rvec * gmx_restrict xx,
60 rvec * gmx_restrict ff,
61 struct t_forcerec * gmx_restrict fr,
62 t_mdatoms * gmx_restrict mdatoms,
63 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
64 t_nrnb * gmx_restrict nrnb)
66 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
67 * just 0 for non-waters.
68 * Suffixes A,B,C,D,E,F,G,H refer to j loop unrolling done with AVX, e.g. for the eight different
69 * jnr indices corresponding to data put in the four positions in the SIMD register.
71 int i_shift_offset,i_coord_offset,outeriter,inneriter;
72 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
73 int jnrA,jnrB,jnrC,jnrD;
74 int jnrE,jnrF,jnrG,jnrH;
75 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
76 int jnrlistE,jnrlistF,jnrlistG,jnrlistH;
77 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
78 int j_coord_offsetE,j_coord_offsetF,j_coord_offsetG,j_coord_offsetH;
79 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
81 real *shiftvec,*fshift,*x,*f;
82 real *fjptrA,*fjptrB,*fjptrC,*fjptrD,*fjptrE,*fjptrF,*fjptrG,*fjptrH;
84 __m256 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
85 real * vdwioffsetptr0;
86 __m256 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
87 real * vdwioffsetptr1;
88 __m256 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
89 real * vdwioffsetptr2;
90 __m256 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
91 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D,vdwjidx0E,vdwjidx0F,vdwjidx0G,vdwjidx0H;
92 __m256 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
93 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D,vdwjidx1E,vdwjidx1F,vdwjidx1G,vdwjidx1H;
94 __m256 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
95 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D,vdwjidx2E,vdwjidx2F,vdwjidx2G,vdwjidx2H;
96 __m256 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
97 __m256 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
98 __m256 dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
99 __m256 dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
100 __m256 dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
101 __m256 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
102 __m256 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
103 __m256 dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
104 __m256 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
105 __m256 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
106 __m256 velec,felec,velecsum,facel,crf,krf,krf2;
109 __m256 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
112 __m256 one_sixth = _mm256_set1_ps(1.0/6.0);
113 __m256 one_twelfth = _mm256_set1_ps(1.0/12.0);
115 __m128i vfitab_lo,vfitab_hi;
116 __m128i ifour = _mm_set1_epi32(4);
117 __m256 rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
119 __m256 dummy_mask,cutoff_mask;
120 __m256 signbit = _mm256_castsi256_ps( _mm256_set1_epi32(0x80000000) );
121 __m256 one = _mm256_set1_ps(1.0);
122 __m256 two = _mm256_set1_ps(2.0);
128 jindex = nlist->jindex;
130 shiftidx = nlist->shift;
132 shiftvec = fr->shift_vec[0];
133 fshift = fr->fshift[0];
134 facel = _mm256_set1_ps(fr->ic->epsfac);
135 charge = mdatoms->chargeA;
136 nvdwtype = fr->ntype;
138 vdwtype = mdatoms->typeA;
140 vftab = kernel_data->table_elec->data;
141 vftabscale = _mm256_set1_ps(kernel_data->table_elec->scale);
143 /* Setup water-specific parameters */
144 inr = nlist->iinr[0];
145 iq0 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+0]));
146 iq1 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+1]));
147 iq2 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+2]));
148 vdwioffsetptr0 = vdwparam+2*nvdwtype*vdwtype[inr+0];
150 jq0 = _mm256_set1_ps(charge[inr+0]);
151 jq1 = _mm256_set1_ps(charge[inr+1]);
152 jq2 = _mm256_set1_ps(charge[inr+2]);
153 vdwjidx0A = 2*vdwtype[inr+0];
154 qq00 = _mm256_mul_ps(iq0,jq0);
155 c6_00 = _mm256_set1_ps(vdwioffsetptr0[vdwjidx0A]);
156 c12_00 = _mm256_set1_ps(vdwioffsetptr0[vdwjidx0A+1]);
157 qq01 = _mm256_mul_ps(iq0,jq1);
158 qq02 = _mm256_mul_ps(iq0,jq2);
159 qq10 = _mm256_mul_ps(iq1,jq0);
160 qq11 = _mm256_mul_ps(iq1,jq1);
161 qq12 = _mm256_mul_ps(iq1,jq2);
162 qq20 = _mm256_mul_ps(iq2,jq0);
163 qq21 = _mm256_mul_ps(iq2,jq1);
164 qq22 = _mm256_mul_ps(iq2,jq2);
166 /* Avoid stupid compiler warnings */
167 jnrA = jnrB = jnrC = jnrD = jnrE = jnrF = jnrG = jnrH = 0;
180 for(iidx=0;iidx<4*DIM;iidx++)
185 /* Start outer loop over neighborlists */
186 for(iidx=0; iidx<nri; iidx++)
188 /* Load shift vector for this list */
189 i_shift_offset = DIM*shiftidx[iidx];
191 /* Load limits for loop over neighbors */
192 j_index_start = jindex[iidx];
193 j_index_end = jindex[iidx+1];
195 /* Get outer coordinate index */
197 i_coord_offset = DIM*inr;
199 /* Load i particle coords and add shift vector */
200 gmx_mm256_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset,
201 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
203 fix0 = _mm256_setzero_ps();
204 fiy0 = _mm256_setzero_ps();
205 fiz0 = _mm256_setzero_ps();
206 fix1 = _mm256_setzero_ps();
207 fiy1 = _mm256_setzero_ps();
208 fiz1 = _mm256_setzero_ps();
209 fix2 = _mm256_setzero_ps();
210 fiy2 = _mm256_setzero_ps();
211 fiz2 = _mm256_setzero_ps();
213 /* Reset potential sums */
214 velecsum = _mm256_setzero_ps();
215 vvdwsum = _mm256_setzero_ps();
217 /* Start inner kernel loop */
218 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+7]>=0; jidx+=8)
221 /* Get j neighbor index, and coordinate index */
230 j_coord_offsetA = DIM*jnrA;
231 j_coord_offsetB = DIM*jnrB;
232 j_coord_offsetC = DIM*jnrC;
233 j_coord_offsetD = DIM*jnrD;
234 j_coord_offsetE = DIM*jnrE;
235 j_coord_offsetF = DIM*jnrF;
236 j_coord_offsetG = DIM*jnrG;
237 j_coord_offsetH = DIM*jnrH;
239 /* load j atom coordinates */
240 gmx_mm256_load_3rvec_8ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
241 x+j_coord_offsetC,x+j_coord_offsetD,
242 x+j_coord_offsetE,x+j_coord_offsetF,
243 x+j_coord_offsetG,x+j_coord_offsetH,
244 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
246 /* Calculate displacement vector */
247 dx00 = _mm256_sub_ps(ix0,jx0);
248 dy00 = _mm256_sub_ps(iy0,jy0);
249 dz00 = _mm256_sub_ps(iz0,jz0);
250 dx01 = _mm256_sub_ps(ix0,jx1);
251 dy01 = _mm256_sub_ps(iy0,jy1);
252 dz01 = _mm256_sub_ps(iz0,jz1);
253 dx02 = _mm256_sub_ps(ix0,jx2);
254 dy02 = _mm256_sub_ps(iy0,jy2);
255 dz02 = _mm256_sub_ps(iz0,jz2);
256 dx10 = _mm256_sub_ps(ix1,jx0);
257 dy10 = _mm256_sub_ps(iy1,jy0);
258 dz10 = _mm256_sub_ps(iz1,jz0);
259 dx11 = _mm256_sub_ps(ix1,jx1);
260 dy11 = _mm256_sub_ps(iy1,jy1);
261 dz11 = _mm256_sub_ps(iz1,jz1);
262 dx12 = _mm256_sub_ps(ix1,jx2);
263 dy12 = _mm256_sub_ps(iy1,jy2);
264 dz12 = _mm256_sub_ps(iz1,jz2);
265 dx20 = _mm256_sub_ps(ix2,jx0);
266 dy20 = _mm256_sub_ps(iy2,jy0);
267 dz20 = _mm256_sub_ps(iz2,jz0);
268 dx21 = _mm256_sub_ps(ix2,jx1);
269 dy21 = _mm256_sub_ps(iy2,jy1);
270 dz21 = _mm256_sub_ps(iz2,jz1);
271 dx22 = _mm256_sub_ps(ix2,jx2);
272 dy22 = _mm256_sub_ps(iy2,jy2);
273 dz22 = _mm256_sub_ps(iz2,jz2);
275 /* Calculate squared distance and things based on it */
276 rsq00 = gmx_mm256_calc_rsq_ps(dx00,dy00,dz00);
277 rsq01 = gmx_mm256_calc_rsq_ps(dx01,dy01,dz01);
278 rsq02 = gmx_mm256_calc_rsq_ps(dx02,dy02,dz02);
279 rsq10 = gmx_mm256_calc_rsq_ps(dx10,dy10,dz10);
280 rsq11 = gmx_mm256_calc_rsq_ps(dx11,dy11,dz11);
281 rsq12 = gmx_mm256_calc_rsq_ps(dx12,dy12,dz12);
282 rsq20 = gmx_mm256_calc_rsq_ps(dx20,dy20,dz20);
283 rsq21 = gmx_mm256_calc_rsq_ps(dx21,dy21,dz21);
284 rsq22 = gmx_mm256_calc_rsq_ps(dx22,dy22,dz22);
286 rinv00 = avx256_invsqrt_f(rsq00);
287 rinv01 = avx256_invsqrt_f(rsq01);
288 rinv02 = avx256_invsqrt_f(rsq02);
289 rinv10 = avx256_invsqrt_f(rsq10);
290 rinv11 = avx256_invsqrt_f(rsq11);
291 rinv12 = avx256_invsqrt_f(rsq12);
292 rinv20 = avx256_invsqrt_f(rsq20);
293 rinv21 = avx256_invsqrt_f(rsq21);
294 rinv22 = avx256_invsqrt_f(rsq22);
296 rinvsq00 = _mm256_mul_ps(rinv00,rinv00);
298 fjx0 = _mm256_setzero_ps();
299 fjy0 = _mm256_setzero_ps();
300 fjz0 = _mm256_setzero_ps();
301 fjx1 = _mm256_setzero_ps();
302 fjy1 = _mm256_setzero_ps();
303 fjz1 = _mm256_setzero_ps();
304 fjx2 = _mm256_setzero_ps();
305 fjy2 = _mm256_setzero_ps();
306 fjz2 = _mm256_setzero_ps();
308 /**************************
309 * CALCULATE INTERACTIONS *
310 **************************/
312 r00 = _mm256_mul_ps(rsq00,rinv00);
314 /* Calculate table index by multiplying r with table scale and truncate to integer */
315 rt = _mm256_mul_ps(r00,vftabscale);
316 vfitab = _mm256_cvttps_epi32(rt);
317 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
318 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
319 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
320 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
321 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
322 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
324 /* CUBIC SPLINE TABLE ELECTROSTATICS */
325 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
326 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
327 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
328 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
329 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
330 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
331 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
332 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
333 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
334 Heps = _mm256_mul_ps(vfeps,H);
335 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
336 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
337 velec = _mm256_mul_ps(qq00,VV);
338 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
339 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq00,FF),_mm256_mul_ps(vftabscale,rinv00)));
341 /* LENNARD-JONES DISPERSION/REPULSION */
343 rinvsix = _mm256_mul_ps(_mm256_mul_ps(rinvsq00,rinvsq00),rinvsq00);
344 vvdw6 = _mm256_mul_ps(c6_00,rinvsix);
345 vvdw12 = _mm256_mul_ps(c12_00,_mm256_mul_ps(rinvsix,rinvsix));
346 vvdw = _mm256_sub_ps( _mm256_mul_ps(vvdw12,one_twelfth) , _mm256_mul_ps(vvdw6,one_sixth) );
347 fvdw = _mm256_mul_ps(_mm256_sub_ps(vvdw12,vvdw6),rinvsq00);
349 /* Update potential sum for this i atom from the interaction with this j atom. */
350 velecsum = _mm256_add_ps(velecsum,velec);
351 vvdwsum = _mm256_add_ps(vvdwsum,vvdw);
353 fscal = _mm256_add_ps(felec,fvdw);
355 /* Calculate temporary vectorial force */
356 tx = _mm256_mul_ps(fscal,dx00);
357 ty = _mm256_mul_ps(fscal,dy00);
358 tz = _mm256_mul_ps(fscal,dz00);
360 /* Update vectorial force */
361 fix0 = _mm256_add_ps(fix0,tx);
362 fiy0 = _mm256_add_ps(fiy0,ty);
363 fiz0 = _mm256_add_ps(fiz0,tz);
365 fjx0 = _mm256_add_ps(fjx0,tx);
366 fjy0 = _mm256_add_ps(fjy0,ty);
367 fjz0 = _mm256_add_ps(fjz0,tz);
369 /**************************
370 * CALCULATE INTERACTIONS *
371 **************************/
373 r01 = _mm256_mul_ps(rsq01,rinv01);
375 /* Calculate table index by multiplying r with table scale and truncate to integer */
376 rt = _mm256_mul_ps(r01,vftabscale);
377 vfitab = _mm256_cvttps_epi32(rt);
378 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
379 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
380 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
381 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
382 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
383 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
385 /* CUBIC SPLINE TABLE ELECTROSTATICS */
386 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
387 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
388 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
389 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
390 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
391 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
392 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
393 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
394 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
395 Heps = _mm256_mul_ps(vfeps,H);
396 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
397 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
398 velec = _mm256_mul_ps(qq01,VV);
399 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
400 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq01,FF),_mm256_mul_ps(vftabscale,rinv01)));
402 /* Update potential sum for this i atom from the interaction with this j atom. */
403 velecsum = _mm256_add_ps(velecsum,velec);
407 /* Calculate temporary vectorial force */
408 tx = _mm256_mul_ps(fscal,dx01);
409 ty = _mm256_mul_ps(fscal,dy01);
410 tz = _mm256_mul_ps(fscal,dz01);
412 /* Update vectorial force */
413 fix0 = _mm256_add_ps(fix0,tx);
414 fiy0 = _mm256_add_ps(fiy0,ty);
415 fiz0 = _mm256_add_ps(fiz0,tz);
417 fjx1 = _mm256_add_ps(fjx1,tx);
418 fjy1 = _mm256_add_ps(fjy1,ty);
419 fjz1 = _mm256_add_ps(fjz1,tz);
421 /**************************
422 * CALCULATE INTERACTIONS *
423 **************************/
425 r02 = _mm256_mul_ps(rsq02,rinv02);
427 /* Calculate table index by multiplying r with table scale and truncate to integer */
428 rt = _mm256_mul_ps(r02,vftabscale);
429 vfitab = _mm256_cvttps_epi32(rt);
430 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
431 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
432 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
433 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
434 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
435 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
437 /* CUBIC SPLINE TABLE ELECTROSTATICS */
438 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
439 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
440 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
441 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
442 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
443 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
444 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
445 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
446 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
447 Heps = _mm256_mul_ps(vfeps,H);
448 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
449 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
450 velec = _mm256_mul_ps(qq02,VV);
451 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
452 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq02,FF),_mm256_mul_ps(vftabscale,rinv02)));
454 /* Update potential sum for this i atom from the interaction with this j atom. */
455 velecsum = _mm256_add_ps(velecsum,velec);
459 /* Calculate temporary vectorial force */
460 tx = _mm256_mul_ps(fscal,dx02);
461 ty = _mm256_mul_ps(fscal,dy02);
462 tz = _mm256_mul_ps(fscal,dz02);
464 /* Update vectorial force */
465 fix0 = _mm256_add_ps(fix0,tx);
466 fiy0 = _mm256_add_ps(fiy0,ty);
467 fiz0 = _mm256_add_ps(fiz0,tz);
469 fjx2 = _mm256_add_ps(fjx2,tx);
470 fjy2 = _mm256_add_ps(fjy2,ty);
471 fjz2 = _mm256_add_ps(fjz2,tz);
473 /**************************
474 * CALCULATE INTERACTIONS *
475 **************************/
477 r10 = _mm256_mul_ps(rsq10,rinv10);
479 /* Calculate table index by multiplying r with table scale and truncate to integer */
480 rt = _mm256_mul_ps(r10,vftabscale);
481 vfitab = _mm256_cvttps_epi32(rt);
482 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
483 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
484 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
485 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
486 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
487 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
489 /* CUBIC SPLINE TABLE ELECTROSTATICS */
490 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
491 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
492 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
493 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
494 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
495 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
496 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
497 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
498 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
499 Heps = _mm256_mul_ps(vfeps,H);
500 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
501 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
502 velec = _mm256_mul_ps(qq10,VV);
503 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
504 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq10,FF),_mm256_mul_ps(vftabscale,rinv10)));
506 /* Update potential sum for this i atom from the interaction with this j atom. */
507 velecsum = _mm256_add_ps(velecsum,velec);
511 /* Calculate temporary vectorial force */
512 tx = _mm256_mul_ps(fscal,dx10);
513 ty = _mm256_mul_ps(fscal,dy10);
514 tz = _mm256_mul_ps(fscal,dz10);
516 /* Update vectorial force */
517 fix1 = _mm256_add_ps(fix1,tx);
518 fiy1 = _mm256_add_ps(fiy1,ty);
519 fiz1 = _mm256_add_ps(fiz1,tz);
521 fjx0 = _mm256_add_ps(fjx0,tx);
522 fjy0 = _mm256_add_ps(fjy0,ty);
523 fjz0 = _mm256_add_ps(fjz0,tz);
525 /**************************
526 * CALCULATE INTERACTIONS *
527 **************************/
529 r11 = _mm256_mul_ps(rsq11,rinv11);
531 /* Calculate table index by multiplying r with table scale and truncate to integer */
532 rt = _mm256_mul_ps(r11,vftabscale);
533 vfitab = _mm256_cvttps_epi32(rt);
534 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
535 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
536 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
537 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
538 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
539 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
541 /* CUBIC SPLINE TABLE ELECTROSTATICS */
542 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
543 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
544 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
545 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
546 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
547 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
548 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
549 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
550 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
551 Heps = _mm256_mul_ps(vfeps,H);
552 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
553 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
554 velec = _mm256_mul_ps(qq11,VV);
555 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
556 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq11,FF),_mm256_mul_ps(vftabscale,rinv11)));
558 /* Update potential sum for this i atom from the interaction with this j atom. */
559 velecsum = _mm256_add_ps(velecsum,velec);
563 /* Calculate temporary vectorial force */
564 tx = _mm256_mul_ps(fscal,dx11);
565 ty = _mm256_mul_ps(fscal,dy11);
566 tz = _mm256_mul_ps(fscal,dz11);
568 /* Update vectorial force */
569 fix1 = _mm256_add_ps(fix1,tx);
570 fiy1 = _mm256_add_ps(fiy1,ty);
571 fiz1 = _mm256_add_ps(fiz1,tz);
573 fjx1 = _mm256_add_ps(fjx1,tx);
574 fjy1 = _mm256_add_ps(fjy1,ty);
575 fjz1 = _mm256_add_ps(fjz1,tz);
577 /**************************
578 * CALCULATE INTERACTIONS *
579 **************************/
581 r12 = _mm256_mul_ps(rsq12,rinv12);
583 /* Calculate table index by multiplying r with table scale and truncate to integer */
584 rt = _mm256_mul_ps(r12,vftabscale);
585 vfitab = _mm256_cvttps_epi32(rt);
586 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
587 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
588 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
589 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
590 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
591 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
593 /* CUBIC SPLINE TABLE ELECTROSTATICS */
594 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
595 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
596 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
597 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
598 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
599 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
600 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
601 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
602 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
603 Heps = _mm256_mul_ps(vfeps,H);
604 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
605 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
606 velec = _mm256_mul_ps(qq12,VV);
607 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
608 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq12,FF),_mm256_mul_ps(vftabscale,rinv12)));
610 /* Update potential sum for this i atom from the interaction with this j atom. */
611 velecsum = _mm256_add_ps(velecsum,velec);
615 /* Calculate temporary vectorial force */
616 tx = _mm256_mul_ps(fscal,dx12);
617 ty = _mm256_mul_ps(fscal,dy12);
618 tz = _mm256_mul_ps(fscal,dz12);
620 /* Update vectorial force */
621 fix1 = _mm256_add_ps(fix1,tx);
622 fiy1 = _mm256_add_ps(fiy1,ty);
623 fiz1 = _mm256_add_ps(fiz1,tz);
625 fjx2 = _mm256_add_ps(fjx2,tx);
626 fjy2 = _mm256_add_ps(fjy2,ty);
627 fjz2 = _mm256_add_ps(fjz2,tz);
629 /**************************
630 * CALCULATE INTERACTIONS *
631 **************************/
633 r20 = _mm256_mul_ps(rsq20,rinv20);
635 /* Calculate table index by multiplying r with table scale and truncate to integer */
636 rt = _mm256_mul_ps(r20,vftabscale);
637 vfitab = _mm256_cvttps_epi32(rt);
638 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
639 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
640 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
641 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
642 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
643 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
645 /* CUBIC SPLINE TABLE ELECTROSTATICS */
646 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
647 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
648 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
649 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
650 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
651 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
652 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
653 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
654 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
655 Heps = _mm256_mul_ps(vfeps,H);
656 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
657 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
658 velec = _mm256_mul_ps(qq20,VV);
659 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
660 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq20,FF),_mm256_mul_ps(vftabscale,rinv20)));
662 /* Update potential sum for this i atom from the interaction with this j atom. */
663 velecsum = _mm256_add_ps(velecsum,velec);
667 /* Calculate temporary vectorial force */
668 tx = _mm256_mul_ps(fscal,dx20);
669 ty = _mm256_mul_ps(fscal,dy20);
670 tz = _mm256_mul_ps(fscal,dz20);
672 /* Update vectorial force */
673 fix2 = _mm256_add_ps(fix2,tx);
674 fiy2 = _mm256_add_ps(fiy2,ty);
675 fiz2 = _mm256_add_ps(fiz2,tz);
677 fjx0 = _mm256_add_ps(fjx0,tx);
678 fjy0 = _mm256_add_ps(fjy0,ty);
679 fjz0 = _mm256_add_ps(fjz0,tz);
681 /**************************
682 * CALCULATE INTERACTIONS *
683 **************************/
685 r21 = _mm256_mul_ps(rsq21,rinv21);
687 /* Calculate table index by multiplying r with table scale and truncate to integer */
688 rt = _mm256_mul_ps(r21,vftabscale);
689 vfitab = _mm256_cvttps_epi32(rt);
690 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
691 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
692 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
693 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
694 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
695 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
697 /* CUBIC SPLINE TABLE ELECTROSTATICS */
698 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
699 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
700 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
701 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
702 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
703 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
704 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
705 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
706 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
707 Heps = _mm256_mul_ps(vfeps,H);
708 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
709 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
710 velec = _mm256_mul_ps(qq21,VV);
711 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
712 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq21,FF),_mm256_mul_ps(vftabscale,rinv21)));
714 /* Update potential sum for this i atom from the interaction with this j atom. */
715 velecsum = _mm256_add_ps(velecsum,velec);
719 /* Calculate temporary vectorial force */
720 tx = _mm256_mul_ps(fscal,dx21);
721 ty = _mm256_mul_ps(fscal,dy21);
722 tz = _mm256_mul_ps(fscal,dz21);
724 /* Update vectorial force */
725 fix2 = _mm256_add_ps(fix2,tx);
726 fiy2 = _mm256_add_ps(fiy2,ty);
727 fiz2 = _mm256_add_ps(fiz2,tz);
729 fjx1 = _mm256_add_ps(fjx1,tx);
730 fjy1 = _mm256_add_ps(fjy1,ty);
731 fjz1 = _mm256_add_ps(fjz1,tz);
733 /**************************
734 * CALCULATE INTERACTIONS *
735 **************************/
737 r22 = _mm256_mul_ps(rsq22,rinv22);
739 /* Calculate table index by multiplying r with table scale and truncate to integer */
740 rt = _mm256_mul_ps(r22,vftabscale);
741 vfitab = _mm256_cvttps_epi32(rt);
742 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
743 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
744 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
745 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
746 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
747 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
749 /* CUBIC SPLINE TABLE ELECTROSTATICS */
750 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
751 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
752 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
753 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
754 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
755 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
756 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
757 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
758 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
759 Heps = _mm256_mul_ps(vfeps,H);
760 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
761 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
762 velec = _mm256_mul_ps(qq22,VV);
763 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
764 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq22,FF),_mm256_mul_ps(vftabscale,rinv22)));
766 /* Update potential sum for this i atom from the interaction with this j atom. */
767 velecsum = _mm256_add_ps(velecsum,velec);
771 /* Calculate temporary vectorial force */
772 tx = _mm256_mul_ps(fscal,dx22);
773 ty = _mm256_mul_ps(fscal,dy22);
774 tz = _mm256_mul_ps(fscal,dz22);
776 /* Update vectorial force */
777 fix2 = _mm256_add_ps(fix2,tx);
778 fiy2 = _mm256_add_ps(fiy2,ty);
779 fiz2 = _mm256_add_ps(fiz2,tz);
781 fjx2 = _mm256_add_ps(fjx2,tx);
782 fjy2 = _mm256_add_ps(fjy2,ty);
783 fjz2 = _mm256_add_ps(fjz2,tz);
785 fjptrA = f+j_coord_offsetA;
786 fjptrB = f+j_coord_offsetB;
787 fjptrC = f+j_coord_offsetC;
788 fjptrD = f+j_coord_offsetD;
789 fjptrE = f+j_coord_offsetE;
790 fjptrF = f+j_coord_offsetF;
791 fjptrG = f+j_coord_offsetG;
792 fjptrH = f+j_coord_offsetH;
794 gmx_mm256_decrement_3rvec_8ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,fjptrE,fjptrF,fjptrG,fjptrH,
795 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
797 /* Inner loop uses 400 flops */
803 /* Get j neighbor index, and coordinate index */
804 jnrlistA = jjnr[jidx];
805 jnrlistB = jjnr[jidx+1];
806 jnrlistC = jjnr[jidx+2];
807 jnrlistD = jjnr[jidx+3];
808 jnrlistE = jjnr[jidx+4];
809 jnrlistF = jjnr[jidx+5];
810 jnrlistG = jjnr[jidx+6];
811 jnrlistH = jjnr[jidx+7];
812 /* Sign of each element will be negative for non-real atoms.
813 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
814 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
816 dummy_mask = gmx_mm256_set_m128(gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx+4)),_mm_setzero_si128())),
817 gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128())));
819 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
820 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
821 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
822 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
823 jnrE = (jnrlistE>=0) ? jnrlistE : 0;
824 jnrF = (jnrlistF>=0) ? jnrlistF : 0;
825 jnrG = (jnrlistG>=0) ? jnrlistG : 0;
826 jnrH = (jnrlistH>=0) ? jnrlistH : 0;
827 j_coord_offsetA = DIM*jnrA;
828 j_coord_offsetB = DIM*jnrB;
829 j_coord_offsetC = DIM*jnrC;
830 j_coord_offsetD = DIM*jnrD;
831 j_coord_offsetE = DIM*jnrE;
832 j_coord_offsetF = DIM*jnrF;
833 j_coord_offsetG = DIM*jnrG;
834 j_coord_offsetH = DIM*jnrH;
836 /* load j atom coordinates */
837 gmx_mm256_load_3rvec_8ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
838 x+j_coord_offsetC,x+j_coord_offsetD,
839 x+j_coord_offsetE,x+j_coord_offsetF,
840 x+j_coord_offsetG,x+j_coord_offsetH,
841 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
843 /* Calculate displacement vector */
844 dx00 = _mm256_sub_ps(ix0,jx0);
845 dy00 = _mm256_sub_ps(iy0,jy0);
846 dz00 = _mm256_sub_ps(iz0,jz0);
847 dx01 = _mm256_sub_ps(ix0,jx1);
848 dy01 = _mm256_sub_ps(iy0,jy1);
849 dz01 = _mm256_sub_ps(iz0,jz1);
850 dx02 = _mm256_sub_ps(ix0,jx2);
851 dy02 = _mm256_sub_ps(iy0,jy2);
852 dz02 = _mm256_sub_ps(iz0,jz2);
853 dx10 = _mm256_sub_ps(ix1,jx0);
854 dy10 = _mm256_sub_ps(iy1,jy0);
855 dz10 = _mm256_sub_ps(iz1,jz0);
856 dx11 = _mm256_sub_ps(ix1,jx1);
857 dy11 = _mm256_sub_ps(iy1,jy1);
858 dz11 = _mm256_sub_ps(iz1,jz1);
859 dx12 = _mm256_sub_ps(ix1,jx2);
860 dy12 = _mm256_sub_ps(iy1,jy2);
861 dz12 = _mm256_sub_ps(iz1,jz2);
862 dx20 = _mm256_sub_ps(ix2,jx0);
863 dy20 = _mm256_sub_ps(iy2,jy0);
864 dz20 = _mm256_sub_ps(iz2,jz0);
865 dx21 = _mm256_sub_ps(ix2,jx1);
866 dy21 = _mm256_sub_ps(iy2,jy1);
867 dz21 = _mm256_sub_ps(iz2,jz1);
868 dx22 = _mm256_sub_ps(ix2,jx2);
869 dy22 = _mm256_sub_ps(iy2,jy2);
870 dz22 = _mm256_sub_ps(iz2,jz2);
872 /* Calculate squared distance and things based on it */
873 rsq00 = gmx_mm256_calc_rsq_ps(dx00,dy00,dz00);
874 rsq01 = gmx_mm256_calc_rsq_ps(dx01,dy01,dz01);
875 rsq02 = gmx_mm256_calc_rsq_ps(dx02,dy02,dz02);
876 rsq10 = gmx_mm256_calc_rsq_ps(dx10,dy10,dz10);
877 rsq11 = gmx_mm256_calc_rsq_ps(dx11,dy11,dz11);
878 rsq12 = gmx_mm256_calc_rsq_ps(dx12,dy12,dz12);
879 rsq20 = gmx_mm256_calc_rsq_ps(dx20,dy20,dz20);
880 rsq21 = gmx_mm256_calc_rsq_ps(dx21,dy21,dz21);
881 rsq22 = gmx_mm256_calc_rsq_ps(dx22,dy22,dz22);
883 rinv00 = avx256_invsqrt_f(rsq00);
884 rinv01 = avx256_invsqrt_f(rsq01);
885 rinv02 = avx256_invsqrt_f(rsq02);
886 rinv10 = avx256_invsqrt_f(rsq10);
887 rinv11 = avx256_invsqrt_f(rsq11);
888 rinv12 = avx256_invsqrt_f(rsq12);
889 rinv20 = avx256_invsqrt_f(rsq20);
890 rinv21 = avx256_invsqrt_f(rsq21);
891 rinv22 = avx256_invsqrt_f(rsq22);
893 rinvsq00 = _mm256_mul_ps(rinv00,rinv00);
895 fjx0 = _mm256_setzero_ps();
896 fjy0 = _mm256_setzero_ps();
897 fjz0 = _mm256_setzero_ps();
898 fjx1 = _mm256_setzero_ps();
899 fjy1 = _mm256_setzero_ps();
900 fjz1 = _mm256_setzero_ps();
901 fjx2 = _mm256_setzero_ps();
902 fjy2 = _mm256_setzero_ps();
903 fjz2 = _mm256_setzero_ps();
905 /**************************
906 * CALCULATE INTERACTIONS *
907 **************************/
909 r00 = _mm256_mul_ps(rsq00,rinv00);
910 r00 = _mm256_andnot_ps(dummy_mask,r00);
912 /* Calculate table index by multiplying r with table scale and truncate to integer */
913 rt = _mm256_mul_ps(r00,vftabscale);
914 vfitab = _mm256_cvttps_epi32(rt);
915 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
916 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
917 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
918 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
919 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
920 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
922 /* CUBIC SPLINE TABLE ELECTROSTATICS */
923 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
924 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
925 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
926 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
927 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
928 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
929 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
930 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
931 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
932 Heps = _mm256_mul_ps(vfeps,H);
933 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
934 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
935 velec = _mm256_mul_ps(qq00,VV);
936 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
937 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq00,FF),_mm256_mul_ps(vftabscale,rinv00)));
939 /* LENNARD-JONES DISPERSION/REPULSION */
941 rinvsix = _mm256_mul_ps(_mm256_mul_ps(rinvsq00,rinvsq00),rinvsq00);
942 vvdw6 = _mm256_mul_ps(c6_00,rinvsix);
943 vvdw12 = _mm256_mul_ps(c12_00,_mm256_mul_ps(rinvsix,rinvsix));
944 vvdw = _mm256_sub_ps( _mm256_mul_ps(vvdw12,one_twelfth) , _mm256_mul_ps(vvdw6,one_sixth) );
945 fvdw = _mm256_mul_ps(_mm256_sub_ps(vvdw12,vvdw6),rinvsq00);
947 /* Update potential sum for this i atom from the interaction with this j atom. */
948 velec = _mm256_andnot_ps(dummy_mask,velec);
949 velecsum = _mm256_add_ps(velecsum,velec);
950 vvdw = _mm256_andnot_ps(dummy_mask,vvdw);
951 vvdwsum = _mm256_add_ps(vvdwsum,vvdw);
953 fscal = _mm256_add_ps(felec,fvdw);
955 fscal = _mm256_andnot_ps(dummy_mask,fscal);
957 /* Calculate temporary vectorial force */
958 tx = _mm256_mul_ps(fscal,dx00);
959 ty = _mm256_mul_ps(fscal,dy00);
960 tz = _mm256_mul_ps(fscal,dz00);
962 /* Update vectorial force */
963 fix0 = _mm256_add_ps(fix0,tx);
964 fiy0 = _mm256_add_ps(fiy0,ty);
965 fiz0 = _mm256_add_ps(fiz0,tz);
967 fjx0 = _mm256_add_ps(fjx0,tx);
968 fjy0 = _mm256_add_ps(fjy0,ty);
969 fjz0 = _mm256_add_ps(fjz0,tz);
971 /**************************
972 * CALCULATE INTERACTIONS *
973 **************************/
975 r01 = _mm256_mul_ps(rsq01,rinv01);
976 r01 = _mm256_andnot_ps(dummy_mask,r01);
978 /* Calculate table index by multiplying r with table scale and truncate to integer */
979 rt = _mm256_mul_ps(r01,vftabscale);
980 vfitab = _mm256_cvttps_epi32(rt);
981 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
982 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
983 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
984 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
985 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
986 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
988 /* CUBIC SPLINE TABLE ELECTROSTATICS */
989 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
990 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
991 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
992 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
993 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
994 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
995 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
996 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
997 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
998 Heps = _mm256_mul_ps(vfeps,H);
999 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1000 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1001 velec = _mm256_mul_ps(qq01,VV);
1002 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1003 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq01,FF),_mm256_mul_ps(vftabscale,rinv01)));
1005 /* Update potential sum for this i atom from the interaction with this j atom. */
1006 velec = _mm256_andnot_ps(dummy_mask,velec);
1007 velecsum = _mm256_add_ps(velecsum,velec);
1011 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1013 /* Calculate temporary vectorial force */
1014 tx = _mm256_mul_ps(fscal,dx01);
1015 ty = _mm256_mul_ps(fscal,dy01);
1016 tz = _mm256_mul_ps(fscal,dz01);
1018 /* Update vectorial force */
1019 fix0 = _mm256_add_ps(fix0,tx);
1020 fiy0 = _mm256_add_ps(fiy0,ty);
1021 fiz0 = _mm256_add_ps(fiz0,tz);
1023 fjx1 = _mm256_add_ps(fjx1,tx);
1024 fjy1 = _mm256_add_ps(fjy1,ty);
1025 fjz1 = _mm256_add_ps(fjz1,tz);
1027 /**************************
1028 * CALCULATE INTERACTIONS *
1029 **************************/
1031 r02 = _mm256_mul_ps(rsq02,rinv02);
1032 r02 = _mm256_andnot_ps(dummy_mask,r02);
1034 /* Calculate table index by multiplying r with table scale and truncate to integer */
1035 rt = _mm256_mul_ps(r02,vftabscale);
1036 vfitab = _mm256_cvttps_epi32(rt);
1037 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1038 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1039 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1040 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1041 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1042 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1044 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1045 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1046 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1047 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1048 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1049 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1050 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1051 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1052 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1053 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1054 Heps = _mm256_mul_ps(vfeps,H);
1055 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1056 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1057 velec = _mm256_mul_ps(qq02,VV);
1058 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1059 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq02,FF),_mm256_mul_ps(vftabscale,rinv02)));
1061 /* Update potential sum for this i atom from the interaction with this j atom. */
1062 velec = _mm256_andnot_ps(dummy_mask,velec);
1063 velecsum = _mm256_add_ps(velecsum,velec);
1067 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1069 /* Calculate temporary vectorial force */
1070 tx = _mm256_mul_ps(fscal,dx02);
1071 ty = _mm256_mul_ps(fscal,dy02);
1072 tz = _mm256_mul_ps(fscal,dz02);
1074 /* Update vectorial force */
1075 fix0 = _mm256_add_ps(fix0,tx);
1076 fiy0 = _mm256_add_ps(fiy0,ty);
1077 fiz0 = _mm256_add_ps(fiz0,tz);
1079 fjx2 = _mm256_add_ps(fjx2,tx);
1080 fjy2 = _mm256_add_ps(fjy2,ty);
1081 fjz2 = _mm256_add_ps(fjz2,tz);
1083 /**************************
1084 * CALCULATE INTERACTIONS *
1085 **************************/
1087 r10 = _mm256_mul_ps(rsq10,rinv10);
1088 r10 = _mm256_andnot_ps(dummy_mask,r10);
1090 /* Calculate table index by multiplying r with table scale and truncate to integer */
1091 rt = _mm256_mul_ps(r10,vftabscale);
1092 vfitab = _mm256_cvttps_epi32(rt);
1093 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1094 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1095 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1096 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1097 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1098 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1100 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1101 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1102 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1103 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1104 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1105 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1106 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1107 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1108 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1109 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1110 Heps = _mm256_mul_ps(vfeps,H);
1111 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1112 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1113 velec = _mm256_mul_ps(qq10,VV);
1114 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1115 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq10,FF),_mm256_mul_ps(vftabscale,rinv10)));
1117 /* Update potential sum for this i atom from the interaction with this j atom. */
1118 velec = _mm256_andnot_ps(dummy_mask,velec);
1119 velecsum = _mm256_add_ps(velecsum,velec);
1123 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1125 /* Calculate temporary vectorial force */
1126 tx = _mm256_mul_ps(fscal,dx10);
1127 ty = _mm256_mul_ps(fscal,dy10);
1128 tz = _mm256_mul_ps(fscal,dz10);
1130 /* Update vectorial force */
1131 fix1 = _mm256_add_ps(fix1,tx);
1132 fiy1 = _mm256_add_ps(fiy1,ty);
1133 fiz1 = _mm256_add_ps(fiz1,tz);
1135 fjx0 = _mm256_add_ps(fjx0,tx);
1136 fjy0 = _mm256_add_ps(fjy0,ty);
1137 fjz0 = _mm256_add_ps(fjz0,tz);
1139 /**************************
1140 * CALCULATE INTERACTIONS *
1141 **************************/
1143 r11 = _mm256_mul_ps(rsq11,rinv11);
1144 r11 = _mm256_andnot_ps(dummy_mask,r11);
1146 /* Calculate table index by multiplying r with table scale and truncate to integer */
1147 rt = _mm256_mul_ps(r11,vftabscale);
1148 vfitab = _mm256_cvttps_epi32(rt);
1149 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1150 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1151 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1152 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1153 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1154 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1156 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1157 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1158 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1159 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1160 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1161 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1162 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1163 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1164 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1165 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1166 Heps = _mm256_mul_ps(vfeps,H);
1167 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1168 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1169 velec = _mm256_mul_ps(qq11,VV);
1170 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1171 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq11,FF),_mm256_mul_ps(vftabscale,rinv11)));
1173 /* Update potential sum for this i atom from the interaction with this j atom. */
1174 velec = _mm256_andnot_ps(dummy_mask,velec);
1175 velecsum = _mm256_add_ps(velecsum,velec);
1179 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1181 /* Calculate temporary vectorial force */
1182 tx = _mm256_mul_ps(fscal,dx11);
1183 ty = _mm256_mul_ps(fscal,dy11);
1184 tz = _mm256_mul_ps(fscal,dz11);
1186 /* Update vectorial force */
1187 fix1 = _mm256_add_ps(fix1,tx);
1188 fiy1 = _mm256_add_ps(fiy1,ty);
1189 fiz1 = _mm256_add_ps(fiz1,tz);
1191 fjx1 = _mm256_add_ps(fjx1,tx);
1192 fjy1 = _mm256_add_ps(fjy1,ty);
1193 fjz1 = _mm256_add_ps(fjz1,tz);
1195 /**************************
1196 * CALCULATE INTERACTIONS *
1197 **************************/
1199 r12 = _mm256_mul_ps(rsq12,rinv12);
1200 r12 = _mm256_andnot_ps(dummy_mask,r12);
1202 /* Calculate table index by multiplying r with table scale and truncate to integer */
1203 rt = _mm256_mul_ps(r12,vftabscale);
1204 vfitab = _mm256_cvttps_epi32(rt);
1205 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1206 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1207 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1208 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1209 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1210 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1212 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1213 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1214 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1215 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1216 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1217 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1218 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1219 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1220 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1221 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1222 Heps = _mm256_mul_ps(vfeps,H);
1223 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1224 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1225 velec = _mm256_mul_ps(qq12,VV);
1226 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1227 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq12,FF),_mm256_mul_ps(vftabscale,rinv12)));
1229 /* Update potential sum for this i atom from the interaction with this j atom. */
1230 velec = _mm256_andnot_ps(dummy_mask,velec);
1231 velecsum = _mm256_add_ps(velecsum,velec);
1235 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1237 /* Calculate temporary vectorial force */
1238 tx = _mm256_mul_ps(fscal,dx12);
1239 ty = _mm256_mul_ps(fscal,dy12);
1240 tz = _mm256_mul_ps(fscal,dz12);
1242 /* Update vectorial force */
1243 fix1 = _mm256_add_ps(fix1,tx);
1244 fiy1 = _mm256_add_ps(fiy1,ty);
1245 fiz1 = _mm256_add_ps(fiz1,tz);
1247 fjx2 = _mm256_add_ps(fjx2,tx);
1248 fjy2 = _mm256_add_ps(fjy2,ty);
1249 fjz2 = _mm256_add_ps(fjz2,tz);
1251 /**************************
1252 * CALCULATE INTERACTIONS *
1253 **************************/
1255 r20 = _mm256_mul_ps(rsq20,rinv20);
1256 r20 = _mm256_andnot_ps(dummy_mask,r20);
1258 /* Calculate table index by multiplying r with table scale and truncate to integer */
1259 rt = _mm256_mul_ps(r20,vftabscale);
1260 vfitab = _mm256_cvttps_epi32(rt);
1261 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1262 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1263 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1264 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1265 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1266 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1268 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1269 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1270 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1271 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1272 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1273 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1274 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1275 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1276 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1277 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1278 Heps = _mm256_mul_ps(vfeps,H);
1279 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1280 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1281 velec = _mm256_mul_ps(qq20,VV);
1282 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1283 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq20,FF),_mm256_mul_ps(vftabscale,rinv20)));
1285 /* Update potential sum for this i atom from the interaction with this j atom. */
1286 velec = _mm256_andnot_ps(dummy_mask,velec);
1287 velecsum = _mm256_add_ps(velecsum,velec);
1291 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1293 /* Calculate temporary vectorial force */
1294 tx = _mm256_mul_ps(fscal,dx20);
1295 ty = _mm256_mul_ps(fscal,dy20);
1296 tz = _mm256_mul_ps(fscal,dz20);
1298 /* Update vectorial force */
1299 fix2 = _mm256_add_ps(fix2,tx);
1300 fiy2 = _mm256_add_ps(fiy2,ty);
1301 fiz2 = _mm256_add_ps(fiz2,tz);
1303 fjx0 = _mm256_add_ps(fjx0,tx);
1304 fjy0 = _mm256_add_ps(fjy0,ty);
1305 fjz0 = _mm256_add_ps(fjz0,tz);
1307 /**************************
1308 * CALCULATE INTERACTIONS *
1309 **************************/
1311 r21 = _mm256_mul_ps(rsq21,rinv21);
1312 r21 = _mm256_andnot_ps(dummy_mask,r21);
1314 /* Calculate table index by multiplying r with table scale and truncate to integer */
1315 rt = _mm256_mul_ps(r21,vftabscale);
1316 vfitab = _mm256_cvttps_epi32(rt);
1317 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1318 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1319 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1320 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1321 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1322 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1324 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1325 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1326 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1327 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1328 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1329 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1330 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1331 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1332 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1333 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1334 Heps = _mm256_mul_ps(vfeps,H);
1335 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1336 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1337 velec = _mm256_mul_ps(qq21,VV);
1338 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1339 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq21,FF),_mm256_mul_ps(vftabscale,rinv21)));
1341 /* Update potential sum for this i atom from the interaction with this j atom. */
1342 velec = _mm256_andnot_ps(dummy_mask,velec);
1343 velecsum = _mm256_add_ps(velecsum,velec);
1347 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1349 /* Calculate temporary vectorial force */
1350 tx = _mm256_mul_ps(fscal,dx21);
1351 ty = _mm256_mul_ps(fscal,dy21);
1352 tz = _mm256_mul_ps(fscal,dz21);
1354 /* Update vectorial force */
1355 fix2 = _mm256_add_ps(fix2,tx);
1356 fiy2 = _mm256_add_ps(fiy2,ty);
1357 fiz2 = _mm256_add_ps(fiz2,tz);
1359 fjx1 = _mm256_add_ps(fjx1,tx);
1360 fjy1 = _mm256_add_ps(fjy1,ty);
1361 fjz1 = _mm256_add_ps(fjz1,tz);
1363 /**************************
1364 * CALCULATE INTERACTIONS *
1365 **************************/
1367 r22 = _mm256_mul_ps(rsq22,rinv22);
1368 r22 = _mm256_andnot_ps(dummy_mask,r22);
1370 /* Calculate table index by multiplying r with table scale and truncate to integer */
1371 rt = _mm256_mul_ps(r22,vftabscale);
1372 vfitab = _mm256_cvttps_epi32(rt);
1373 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1374 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1375 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1376 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1377 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1378 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1380 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1381 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1382 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1383 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1384 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1385 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1386 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1387 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1388 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1389 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1390 Heps = _mm256_mul_ps(vfeps,H);
1391 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1392 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1393 velec = _mm256_mul_ps(qq22,VV);
1394 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1395 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq22,FF),_mm256_mul_ps(vftabscale,rinv22)));
1397 /* Update potential sum for this i atom from the interaction with this j atom. */
1398 velec = _mm256_andnot_ps(dummy_mask,velec);
1399 velecsum = _mm256_add_ps(velecsum,velec);
1403 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1405 /* Calculate temporary vectorial force */
1406 tx = _mm256_mul_ps(fscal,dx22);
1407 ty = _mm256_mul_ps(fscal,dy22);
1408 tz = _mm256_mul_ps(fscal,dz22);
1410 /* Update vectorial force */
1411 fix2 = _mm256_add_ps(fix2,tx);
1412 fiy2 = _mm256_add_ps(fiy2,ty);
1413 fiz2 = _mm256_add_ps(fiz2,tz);
1415 fjx2 = _mm256_add_ps(fjx2,tx);
1416 fjy2 = _mm256_add_ps(fjy2,ty);
1417 fjz2 = _mm256_add_ps(fjz2,tz);
1419 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
1420 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
1421 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
1422 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
1423 fjptrE = (jnrlistE>=0) ? f+j_coord_offsetE : scratch;
1424 fjptrF = (jnrlistF>=0) ? f+j_coord_offsetF : scratch;
1425 fjptrG = (jnrlistG>=0) ? f+j_coord_offsetG : scratch;
1426 fjptrH = (jnrlistH>=0) ? f+j_coord_offsetH : scratch;
1428 gmx_mm256_decrement_3rvec_8ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,fjptrE,fjptrF,fjptrG,fjptrH,
1429 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1431 /* Inner loop uses 409 flops */
1434 /* End of innermost loop */
1436 gmx_mm256_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1437 f+i_coord_offset,fshift+i_shift_offset);
1440 /* Update potential energies */
1441 gmx_mm256_update_1pot_ps(velecsum,kernel_data->energygrp_elec+ggid);
1442 gmx_mm256_update_1pot_ps(vvdwsum,kernel_data->energygrp_vdw+ggid);
1444 /* Increment number of inner iterations */
1445 inneriter += j_index_end - j_index_start;
1447 /* Outer loop uses 20 flops */
1450 /* Increment number of outer iterations */
1453 /* Update outer/inner flops */
1455 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_VF,outeriter*20 + inneriter*409);
1458 * Gromacs nonbonded kernel: nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_F_avx_256_single
1459 * Electrostatics interaction: CubicSplineTable
1460 * VdW interaction: LennardJones
1461 * Geometry: Water3-Water3
1462 * Calculate force/pot: Force
1465 nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_F_avx_256_single
1466 (t_nblist * gmx_restrict nlist,
1467 rvec * gmx_restrict xx,
1468 rvec * gmx_restrict ff,
1469 struct t_forcerec * gmx_restrict fr,
1470 t_mdatoms * gmx_restrict mdatoms,
1471 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
1472 t_nrnb * gmx_restrict nrnb)
1474 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
1475 * just 0 for non-waters.
1476 * Suffixes A,B,C,D,E,F,G,H refer to j loop unrolling done with AVX, e.g. for the eight different
1477 * jnr indices corresponding to data put in the four positions in the SIMD register.
1479 int i_shift_offset,i_coord_offset,outeriter,inneriter;
1480 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1481 int jnrA,jnrB,jnrC,jnrD;
1482 int jnrE,jnrF,jnrG,jnrH;
1483 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
1484 int jnrlistE,jnrlistF,jnrlistG,jnrlistH;
1485 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
1486 int j_coord_offsetE,j_coord_offsetF,j_coord_offsetG,j_coord_offsetH;
1487 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
1488 real rcutoff_scalar;
1489 real *shiftvec,*fshift,*x,*f;
1490 real *fjptrA,*fjptrB,*fjptrC,*fjptrD,*fjptrE,*fjptrF,*fjptrG,*fjptrH;
1491 real scratch[4*DIM];
1492 __m256 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
1493 real * vdwioffsetptr0;
1494 __m256 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
1495 real * vdwioffsetptr1;
1496 __m256 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1497 real * vdwioffsetptr2;
1498 __m256 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1499 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D,vdwjidx0E,vdwjidx0F,vdwjidx0G,vdwjidx0H;
1500 __m256 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
1501 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D,vdwjidx1E,vdwjidx1F,vdwjidx1G,vdwjidx1H;
1502 __m256 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1503 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D,vdwjidx2E,vdwjidx2F,vdwjidx2G,vdwjidx2H;
1504 __m256 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1505 __m256 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
1506 __m256 dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
1507 __m256 dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
1508 __m256 dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
1509 __m256 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1510 __m256 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1511 __m256 dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
1512 __m256 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1513 __m256 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1514 __m256 velec,felec,velecsum,facel,crf,krf,krf2;
1517 __m256 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
1520 __m256 one_sixth = _mm256_set1_ps(1.0/6.0);
1521 __m256 one_twelfth = _mm256_set1_ps(1.0/12.0);
1523 __m128i vfitab_lo,vfitab_hi;
1524 __m128i ifour = _mm_set1_epi32(4);
1525 __m256 rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
1527 __m256 dummy_mask,cutoff_mask;
1528 __m256 signbit = _mm256_castsi256_ps( _mm256_set1_epi32(0x80000000) );
1529 __m256 one = _mm256_set1_ps(1.0);
1530 __m256 two = _mm256_set1_ps(2.0);
1536 jindex = nlist->jindex;
1538 shiftidx = nlist->shift;
1540 shiftvec = fr->shift_vec[0];
1541 fshift = fr->fshift[0];
1542 facel = _mm256_set1_ps(fr->ic->epsfac);
1543 charge = mdatoms->chargeA;
1544 nvdwtype = fr->ntype;
1545 vdwparam = fr->nbfp;
1546 vdwtype = mdatoms->typeA;
1548 vftab = kernel_data->table_elec->data;
1549 vftabscale = _mm256_set1_ps(kernel_data->table_elec->scale);
1551 /* Setup water-specific parameters */
1552 inr = nlist->iinr[0];
1553 iq0 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+0]));
1554 iq1 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+1]));
1555 iq2 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+2]));
1556 vdwioffsetptr0 = vdwparam+2*nvdwtype*vdwtype[inr+0];
1558 jq0 = _mm256_set1_ps(charge[inr+0]);
1559 jq1 = _mm256_set1_ps(charge[inr+1]);
1560 jq2 = _mm256_set1_ps(charge[inr+2]);
1561 vdwjidx0A = 2*vdwtype[inr+0];
1562 qq00 = _mm256_mul_ps(iq0,jq0);
1563 c6_00 = _mm256_set1_ps(vdwioffsetptr0[vdwjidx0A]);
1564 c12_00 = _mm256_set1_ps(vdwioffsetptr0[vdwjidx0A+1]);
1565 qq01 = _mm256_mul_ps(iq0,jq1);
1566 qq02 = _mm256_mul_ps(iq0,jq2);
1567 qq10 = _mm256_mul_ps(iq1,jq0);
1568 qq11 = _mm256_mul_ps(iq1,jq1);
1569 qq12 = _mm256_mul_ps(iq1,jq2);
1570 qq20 = _mm256_mul_ps(iq2,jq0);
1571 qq21 = _mm256_mul_ps(iq2,jq1);
1572 qq22 = _mm256_mul_ps(iq2,jq2);
1574 /* Avoid stupid compiler warnings */
1575 jnrA = jnrB = jnrC = jnrD = jnrE = jnrF = jnrG = jnrH = 0;
1576 j_coord_offsetA = 0;
1577 j_coord_offsetB = 0;
1578 j_coord_offsetC = 0;
1579 j_coord_offsetD = 0;
1580 j_coord_offsetE = 0;
1581 j_coord_offsetF = 0;
1582 j_coord_offsetG = 0;
1583 j_coord_offsetH = 0;
1588 for(iidx=0;iidx<4*DIM;iidx++)
1590 scratch[iidx] = 0.0;
1593 /* Start outer loop over neighborlists */
1594 for(iidx=0; iidx<nri; iidx++)
1596 /* Load shift vector for this list */
1597 i_shift_offset = DIM*shiftidx[iidx];
1599 /* Load limits for loop over neighbors */
1600 j_index_start = jindex[iidx];
1601 j_index_end = jindex[iidx+1];
1603 /* Get outer coordinate index */
1605 i_coord_offset = DIM*inr;
1607 /* Load i particle coords and add shift vector */
1608 gmx_mm256_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset,
1609 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
1611 fix0 = _mm256_setzero_ps();
1612 fiy0 = _mm256_setzero_ps();
1613 fiz0 = _mm256_setzero_ps();
1614 fix1 = _mm256_setzero_ps();
1615 fiy1 = _mm256_setzero_ps();
1616 fiz1 = _mm256_setzero_ps();
1617 fix2 = _mm256_setzero_ps();
1618 fiy2 = _mm256_setzero_ps();
1619 fiz2 = _mm256_setzero_ps();
1621 /* Start inner kernel loop */
1622 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+7]>=0; jidx+=8)
1625 /* Get j neighbor index, and coordinate index */
1627 jnrB = jjnr[jidx+1];
1628 jnrC = jjnr[jidx+2];
1629 jnrD = jjnr[jidx+3];
1630 jnrE = jjnr[jidx+4];
1631 jnrF = jjnr[jidx+5];
1632 jnrG = jjnr[jidx+6];
1633 jnrH = jjnr[jidx+7];
1634 j_coord_offsetA = DIM*jnrA;
1635 j_coord_offsetB = DIM*jnrB;
1636 j_coord_offsetC = DIM*jnrC;
1637 j_coord_offsetD = DIM*jnrD;
1638 j_coord_offsetE = DIM*jnrE;
1639 j_coord_offsetF = DIM*jnrF;
1640 j_coord_offsetG = DIM*jnrG;
1641 j_coord_offsetH = DIM*jnrH;
1643 /* load j atom coordinates */
1644 gmx_mm256_load_3rvec_8ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1645 x+j_coord_offsetC,x+j_coord_offsetD,
1646 x+j_coord_offsetE,x+j_coord_offsetF,
1647 x+j_coord_offsetG,x+j_coord_offsetH,
1648 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1650 /* Calculate displacement vector */
1651 dx00 = _mm256_sub_ps(ix0,jx0);
1652 dy00 = _mm256_sub_ps(iy0,jy0);
1653 dz00 = _mm256_sub_ps(iz0,jz0);
1654 dx01 = _mm256_sub_ps(ix0,jx1);
1655 dy01 = _mm256_sub_ps(iy0,jy1);
1656 dz01 = _mm256_sub_ps(iz0,jz1);
1657 dx02 = _mm256_sub_ps(ix0,jx2);
1658 dy02 = _mm256_sub_ps(iy0,jy2);
1659 dz02 = _mm256_sub_ps(iz0,jz2);
1660 dx10 = _mm256_sub_ps(ix1,jx0);
1661 dy10 = _mm256_sub_ps(iy1,jy0);
1662 dz10 = _mm256_sub_ps(iz1,jz0);
1663 dx11 = _mm256_sub_ps(ix1,jx1);
1664 dy11 = _mm256_sub_ps(iy1,jy1);
1665 dz11 = _mm256_sub_ps(iz1,jz1);
1666 dx12 = _mm256_sub_ps(ix1,jx2);
1667 dy12 = _mm256_sub_ps(iy1,jy2);
1668 dz12 = _mm256_sub_ps(iz1,jz2);
1669 dx20 = _mm256_sub_ps(ix2,jx0);
1670 dy20 = _mm256_sub_ps(iy2,jy0);
1671 dz20 = _mm256_sub_ps(iz2,jz0);
1672 dx21 = _mm256_sub_ps(ix2,jx1);
1673 dy21 = _mm256_sub_ps(iy2,jy1);
1674 dz21 = _mm256_sub_ps(iz2,jz1);
1675 dx22 = _mm256_sub_ps(ix2,jx2);
1676 dy22 = _mm256_sub_ps(iy2,jy2);
1677 dz22 = _mm256_sub_ps(iz2,jz2);
1679 /* Calculate squared distance and things based on it */
1680 rsq00 = gmx_mm256_calc_rsq_ps(dx00,dy00,dz00);
1681 rsq01 = gmx_mm256_calc_rsq_ps(dx01,dy01,dz01);
1682 rsq02 = gmx_mm256_calc_rsq_ps(dx02,dy02,dz02);
1683 rsq10 = gmx_mm256_calc_rsq_ps(dx10,dy10,dz10);
1684 rsq11 = gmx_mm256_calc_rsq_ps(dx11,dy11,dz11);
1685 rsq12 = gmx_mm256_calc_rsq_ps(dx12,dy12,dz12);
1686 rsq20 = gmx_mm256_calc_rsq_ps(dx20,dy20,dz20);
1687 rsq21 = gmx_mm256_calc_rsq_ps(dx21,dy21,dz21);
1688 rsq22 = gmx_mm256_calc_rsq_ps(dx22,dy22,dz22);
1690 rinv00 = avx256_invsqrt_f(rsq00);
1691 rinv01 = avx256_invsqrt_f(rsq01);
1692 rinv02 = avx256_invsqrt_f(rsq02);
1693 rinv10 = avx256_invsqrt_f(rsq10);
1694 rinv11 = avx256_invsqrt_f(rsq11);
1695 rinv12 = avx256_invsqrt_f(rsq12);
1696 rinv20 = avx256_invsqrt_f(rsq20);
1697 rinv21 = avx256_invsqrt_f(rsq21);
1698 rinv22 = avx256_invsqrt_f(rsq22);
1700 rinvsq00 = _mm256_mul_ps(rinv00,rinv00);
1702 fjx0 = _mm256_setzero_ps();
1703 fjy0 = _mm256_setzero_ps();
1704 fjz0 = _mm256_setzero_ps();
1705 fjx1 = _mm256_setzero_ps();
1706 fjy1 = _mm256_setzero_ps();
1707 fjz1 = _mm256_setzero_ps();
1708 fjx2 = _mm256_setzero_ps();
1709 fjy2 = _mm256_setzero_ps();
1710 fjz2 = _mm256_setzero_ps();
1712 /**************************
1713 * CALCULATE INTERACTIONS *
1714 **************************/
1716 r00 = _mm256_mul_ps(rsq00,rinv00);
1718 /* Calculate table index by multiplying r with table scale and truncate to integer */
1719 rt = _mm256_mul_ps(r00,vftabscale);
1720 vfitab = _mm256_cvttps_epi32(rt);
1721 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1722 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1723 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1724 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1725 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1726 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1728 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1729 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1730 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1731 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1732 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1733 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1734 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1735 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1736 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1737 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1738 Heps = _mm256_mul_ps(vfeps,H);
1739 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1740 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1741 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq00,FF),_mm256_mul_ps(vftabscale,rinv00)));
1743 /* LENNARD-JONES DISPERSION/REPULSION */
1745 rinvsix = _mm256_mul_ps(_mm256_mul_ps(rinvsq00,rinvsq00),rinvsq00);
1746 fvdw = _mm256_mul_ps(_mm256_sub_ps(_mm256_mul_ps(c12_00,rinvsix),c6_00),_mm256_mul_ps(rinvsix,rinvsq00));
1748 fscal = _mm256_add_ps(felec,fvdw);
1750 /* Calculate temporary vectorial force */
1751 tx = _mm256_mul_ps(fscal,dx00);
1752 ty = _mm256_mul_ps(fscal,dy00);
1753 tz = _mm256_mul_ps(fscal,dz00);
1755 /* Update vectorial force */
1756 fix0 = _mm256_add_ps(fix0,tx);
1757 fiy0 = _mm256_add_ps(fiy0,ty);
1758 fiz0 = _mm256_add_ps(fiz0,tz);
1760 fjx0 = _mm256_add_ps(fjx0,tx);
1761 fjy0 = _mm256_add_ps(fjy0,ty);
1762 fjz0 = _mm256_add_ps(fjz0,tz);
1764 /**************************
1765 * CALCULATE INTERACTIONS *
1766 **************************/
1768 r01 = _mm256_mul_ps(rsq01,rinv01);
1770 /* Calculate table index by multiplying r with table scale and truncate to integer */
1771 rt = _mm256_mul_ps(r01,vftabscale);
1772 vfitab = _mm256_cvttps_epi32(rt);
1773 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1774 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1775 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1776 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1777 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1778 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1780 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1781 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1782 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1783 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1784 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1785 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1786 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1787 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1788 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1789 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1790 Heps = _mm256_mul_ps(vfeps,H);
1791 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1792 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1793 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq01,FF),_mm256_mul_ps(vftabscale,rinv01)));
1797 /* Calculate temporary vectorial force */
1798 tx = _mm256_mul_ps(fscal,dx01);
1799 ty = _mm256_mul_ps(fscal,dy01);
1800 tz = _mm256_mul_ps(fscal,dz01);
1802 /* Update vectorial force */
1803 fix0 = _mm256_add_ps(fix0,tx);
1804 fiy0 = _mm256_add_ps(fiy0,ty);
1805 fiz0 = _mm256_add_ps(fiz0,tz);
1807 fjx1 = _mm256_add_ps(fjx1,tx);
1808 fjy1 = _mm256_add_ps(fjy1,ty);
1809 fjz1 = _mm256_add_ps(fjz1,tz);
1811 /**************************
1812 * CALCULATE INTERACTIONS *
1813 **************************/
1815 r02 = _mm256_mul_ps(rsq02,rinv02);
1817 /* Calculate table index by multiplying r with table scale and truncate to integer */
1818 rt = _mm256_mul_ps(r02,vftabscale);
1819 vfitab = _mm256_cvttps_epi32(rt);
1820 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1821 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1822 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1823 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1824 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1825 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1827 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1828 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1829 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1830 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1831 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1832 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1833 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1834 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1835 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1836 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1837 Heps = _mm256_mul_ps(vfeps,H);
1838 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1839 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1840 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq02,FF),_mm256_mul_ps(vftabscale,rinv02)));
1844 /* Calculate temporary vectorial force */
1845 tx = _mm256_mul_ps(fscal,dx02);
1846 ty = _mm256_mul_ps(fscal,dy02);
1847 tz = _mm256_mul_ps(fscal,dz02);
1849 /* Update vectorial force */
1850 fix0 = _mm256_add_ps(fix0,tx);
1851 fiy0 = _mm256_add_ps(fiy0,ty);
1852 fiz0 = _mm256_add_ps(fiz0,tz);
1854 fjx2 = _mm256_add_ps(fjx2,tx);
1855 fjy2 = _mm256_add_ps(fjy2,ty);
1856 fjz2 = _mm256_add_ps(fjz2,tz);
1858 /**************************
1859 * CALCULATE INTERACTIONS *
1860 **************************/
1862 r10 = _mm256_mul_ps(rsq10,rinv10);
1864 /* Calculate table index by multiplying r with table scale and truncate to integer */
1865 rt = _mm256_mul_ps(r10,vftabscale);
1866 vfitab = _mm256_cvttps_epi32(rt);
1867 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1868 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1869 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1870 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1871 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1872 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1874 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1875 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1876 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1877 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1878 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1879 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1880 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1881 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1882 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1883 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1884 Heps = _mm256_mul_ps(vfeps,H);
1885 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1886 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1887 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq10,FF),_mm256_mul_ps(vftabscale,rinv10)));
1891 /* Calculate temporary vectorial force */
1892 tx = _mm256_mul_ps(fscal,dx10);
1893 ty = _mm256_mul_ps(fscal,dy10);
1894 tz = _mm256_mul_ps(fscal,dz10);
1896 /* Update vectorial force */
1897 fix1 = _mm256_add_ps(fix1,tx);
1898 fiy1 = _mm256_add_ps(fiy1,ty);
1899 fiz1 = _mm256_add_ps(fiz1,tz);
1901 fjx0 = _mm256_add_ps(fjx0,tx);
1902 fjy0 = _mm256_add_ps(fjy0,ty);
1903 fjz0 = _mm256_add_ps(fjz0,tz);
1905 /**************************
1906 * CALCULATE INTERACTIONS *
1907 **************************/
1909 r11 = _mm256_mul_ps(rsq11,rinv11);
1911 /* Calculate table index by multiplying r with table scale and truncate to integer */
1912 rt = _mm256_mul_ps(r11,vftabscale);
1913 vfitab = _mm256_cvttps_epi32(rt);
1914 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1915 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1916 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1917 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1918 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1919 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1921 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1922 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1923 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1924 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1925 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1926 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1927 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1928 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1929 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1930 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1931 Heps = _mm256_mul_ps(vfeps,H);
1932 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1933 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1934 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq11,FF),_mm256_mul_ps(vftabscale,rinv11)));
1938 /* Calculate temporary vectorial force */
1939 tx = _mm256_mul_ps(fscal,dx11);
1940 ty = _mm256_mul_ps(fscal,dy11);
1941 tz = _mm256_mul_ps(fscal,dz11);
1943 /* Update vectorial force */
1944 fix1 = _mm256_add_ps(fix1,tx);
1945 fiy1 = _mm256_add_ps(fiy1,ty);
1946 fiz1 = _mm256_add_ps(fiz1,tz);
1948 fjx1 = _mm256_add_ps(fjx1,tx);
1949 fjy1 = _mm256_add_ps(fjy1,ty);
1950 fjz1 = _mm256_add_ps(fjz1,tz);
1952 /**************************
1953 * CALCULATE INTERACTIONS *
1954 **************************/
1956 r12 = _mm256_mul_ps(rsq12,rinv12);
1958 /* Calculate table index by multiplying r with table scale and truncate to integer */
1959 rt = _mm256_mul_ps(r12,vftabscale);
1960 vfitab = _mm256_cvttps_epi32(rt);
1961 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1962 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1963 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1964 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1965 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1966 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1968 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1969 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1970 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1971 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1972 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1973 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1974 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1975 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1976 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1977 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1978 Heps = _mm256_mul_ps(vfeps,H);
1979 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1980 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1981 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq12,FF),_mm256_mul_ps(vftabscale,rinv12)));
1985 /* Calculate temporary vectorial force */
1986 tx = _mm256_mul_ps(fscal,dx12);
1987 ty = _mm256_mul_ps(fscal,dy12);
1988 tz = _mm256_mul_ps(fscal,dz12);
1990 /* Update vectorial force */
1991 fix1 = _mm256_add_ps(fix1,tx);
1992 fiy1 = _mm256_add_ps(fiy1,ty);
1993 fiz1 = _mm256_add_ps(fiz1,tz);
1995 fjx2 = _mm256_add_ps(fjx2,tx);
1996 fjy2 = _mm256_add_ps(fjy2,ty);
1997 fjz2 = _mm256_add_ps(fjz2,tz);
1999 /**************************
2000 * CALCULATE INTERACTIONS *
2001 **************************/
2003 r20 = _mm256_mul_ps(rsq20,rinv20);
2005 /* Calculate table index by multiplying r with table scale and truncate to integer */
2006 rt = _mm256_mul_ps(r20,vftabscale);
2007 vfitab = _mm256_cvttps_epi32(rt);
2008 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2009 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2010 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2011 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2012 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2013 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2015 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2016 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2017 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2018 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2019 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2020 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2021 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2022 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2023 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2024 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2025 Heps = _mm256_mul_ps(vfeps,H);
2026 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2027 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2028 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq20,FF),_mm256_mul_ps(vftabscale,rinv20)));
2032 /* Calculate temporary vectorial force */
2033 tx = _mm256_mul_ps(fscal,dx20);
2034 ty = _mm256_mul_ps(fscal,dy20);
2035 tz = _mm256_mul_ps(fscal,dz20);
2037 /* Update vectorial force */
2038 fix2 = _mm256_add_ps(fix2,tx);
2039 fiy2 = _mm256_add_ps(fiy2,ty);
2040 fiz2 = _mm256_add_ps(fiz2,tz);
2042 fjx0 = _mm256_add_ps(fjx0,tx);
2043 fjy0 = _mm256_add_ps(fjy0,ty);
2044 fjz0 = _mm256_add_ps(fjz0,tz);
2046 /**************************
2047 * CALCULATE INTERACTIONS *
2048 **************************/
2050 r21 = _mm256_mul_ps(rsq21,rinv21);
2052 /* Calculate table index by multiplying r with table scale and truncate to integer */
2053 rt = _mm256_mul_ps(r21,vftabscale);
2054 vfitab = _mm256_cvttps_epi32(rt);
2055 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2056 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2057 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2058 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2059 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2060 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2062 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2063 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2064 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2065 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2066 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2067 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2068 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2069 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2070 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2071 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2072 Heps = _mm256_mul_ps(vfeps,H);
2073 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2074 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2075 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq21,FF),_mm256_mul_ps(vftabscale,rinv21)));
2079 /* Calculate temporary vectorial force */
2080 tx = _mm256_mul_ps(fscal,dx21);
2081 ty = _mm256_mul_ps(fscal,dy21);
2082 tz = _mm256_mul_ps(fscal,dz21);
2084 /* Update vectorial force */
2085 fix2 = _mm256_add_ps(fix2,tx);
2086 fiy2 = _mm256_add_ps(fiy2,ty);
2087 fiz2 = _mm256_add_ps(fiz2,tz);
2089 fjx1 = _mm256_add_ps(fjx1,tx);
2090 fjy1 = _mm256_add_ps(fjy1,ty);
2091 fjz1 = _mm256_add_ps(fjz1,tz);
2093 /**************************
2094 * CALCULATE INTERACTIONS *
2095 **************************/
2097 r22 = _mm256_mul_ps(rsq22,rinv22);
2099 /* Calculate table index by multiplying r with table scale and truncate to integer */
2100 rt = _mm256_mul_ps(r22,vftabscale);
2101 vfitab = _mm256_cvttps_epi32(rt);
2102 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2103 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2104 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2105 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2106 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2107 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2109 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2110 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2111 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2112 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2113 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2114 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2115 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2116 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2117 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2118 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2119 Heps = _mm256_mul_ps(vfeps,H);
2120 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2121 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2122 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq22,FF),_mm256_mul_ps(vftabscale,rinv22)));
2126 /* Calculate temporary vectorial force */
2127 tx = _mm256_mul_ps(fscal,dx22);
2128 ty = _mm256_mul_ps(fscal,dy22);
2129 tz = _mm256_mul_ps(fscal,dz22);
2131 /* Update vectorial force */
2132 fix2 = _mm256_add_ps(fix2,tx);
2133 fiy2 = _mm256_add_ps(fiy2,ty);
2134 fiz2 = _mm256_add_ps(fiz2,tz);
2136 fjx2 = _mm256_add_ps(fjx2,tx);
2137 fjy2 = _mm256_add_ps(fjy2,ty);
2138 fjz2 = _mm256_add_ps(fjz2,tz);
2140 fjptrA = f+j_coord_offsetA;
2141 fjptrB = f+j_coord_offsetB;
2142 fjptrC = f+j_coord_offsetC;
2143 fjptrD = f+j_coord_offsetD;
2144 fjptrE = f+j_coord_offsetE;
2145 fjptrF = f+j_coord_offsetF;
2146 fjptrG = f+j_coord_offsetG;
2147 fjptrH = f+j_coord_offsetH;
2149 gmx_mm256_decrement_3rvec_8ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,fjptrE,fjptrF,fjptrG,fjptrH,
2150 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
2152 /* Inner loop uses 359 flops */
2155 if(jidx<j_index_end)
2158 /* Get j neighbor index, and coordinate index */
2159 jnrlistA = jjnr[jidx];
2160 jnrlistB = jjnr[jidx+1];
2161 jnrlistC = jjnr[jidx+2];
2162 jnrlistD = jjnr[jidx+3];
2163 jnrlistE = jjnr[jidx+4];
2164 jnrlistF = jjnr[jidx+5];
2165 jnrlistG = jjnr[jidx+6];
2166 jnrlistH = jjnr[jidx+7];
2167 /* Sign of each element will be negative for non-real atoms.
2168 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
2169 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
2171 dummy_mask = gmx_mm256_set_m128(gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx+4)),_mm_setzero_si128())),
2172 gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128())));
2174 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
2175 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
2176 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
2177 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
2178 jnrE = (jnrlistE>=0) ? jnrlistE : 0;
2179 jnrF = (jnrlistF>=0) ? jnrlistF : 0;
2180 jnrG = (jnrlistG>=0) ? jnrlistG : 0;
2181 jnrH = (jnrlistH>=0) ? jnrlistH : 0;
2182 j_coord_offsetA = DIM*jnrA;
2183 j_coord_offsetB = DIM*jnrB;
2184 j_coord_offsetC = DIM*jnrC;
2185 j_coord_offsetD = DIM*jnrD;
2186 j_coord_offsetE = DIM*jnrE;
2187 j_coord_offsetF = DIM*jnrF;
2188 j_coord_offsetG = DIM*jnrG;
2189 j_coord_offsetH = DIM*jnrH;
2191 /* load j atom coordinates */
2192 gmx_mm256_load_3rvec_8ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
2193 x+j_coord_offsetC,x+j_coord_offsetD,
2194 x+j_coord_offsetE,x+j_coord_offsetF,
2195 x+j_coord_offsetG,x+j_coord_offsetH,
2196 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
2198 /* Calculate displacement vector */
2199 dx00 = _mm256_sub_ps(ix0,jx0);
2200 dy00 = _mm256_sub_ps(iy0,jy0);
2201 dz00 = _mm256_sub_ps(iz0,jz0);
2202 dx01 = _mm256_sub_ps(ix0,jx1);
2203 dy01 = _mm256_sub_ps(iy0,jy1);
2204 dz01 = _mm256_sub_ps(iz0,jz1);
2205 dx02 = _mm256_sub_ps(ix0,jx2);
2206 dy02 = _mm256_sub_ps(iy0,jy2);
2207 dz02 = _mm256_sub_ps(iz0,jz2);
2208 dx10 = _mm256_sub_ps(ix1,jx0);
2209 dy10 = _mm256_sub_ps(iy1,jy0);
2210 dz10 = _mm256_sub_ps(iz1,jz0);
2211 dx11 = _mm256_sub_ps(ix1,jx1);
2212 dy11 = _mm256_sub_ps(iy1,jy1);
2213 dz11 = _mm256_sub_ps(iz1,jz1);
2214 dx12 = _mm256_sub_ps(ix1,jx2);
2215 dy12 = _mm256_sub_ps(iy1,jy2);
2216 dz12 = _mm256_sub_ps(iz1,jz2);
2217 dx20 = _mm256_sub_ps(ix2,jx0);
2218 dy20 = _mm256_sub_ps(iy2,jy0);
2219 dz20 = _mm256_sub_ps(iz2,jz0);
2220 dx21 = _mm256_sub_ps(ix2,jx1);
2221 dy21 = _mm256_sub_ps(iy2,jy1);
2222 dz21 = _mm256_sub_ps(iz2,jz1);
2223 dx22 = _mm256_sub_ps(ix2,jx2);
2224 dy22 = _mm256_sub_ps(iy2,jy2);
2225 dz22 = _mm256_sub_ps(iz2,jz2);
2227 /* Calculate squared distance and things based on it */
2228 rsq00 = gmx_mm256_calc_rsq_ps(dx00,dy00,dz00);
2229 rsq01 = gmx_mm256_calc_rsq_ps(dx01,dy01,dz01);
2230 rsq02 = gmx_mm256_calc_rsq_ps(dx02,dy02,dz02);
2231 rsq10 = gmx_mm256_calc_rsq_ps(dx10,dy10,dz10);
2232 rsq11 = gmx_mm256_calc_rsq_ps(dx11,dy11,dz11);
2233 rsq12 = gmx_mm256_calc_rsq_ps(dx12,dy12,dz12);
2234 rsq20 = gmx_mm256_calc_rsq_ps(dx20,dy20,dz20);
2235 rsq21 = gmx_mm256_calc_rsq_ps(dx21,dy21,dz21);
2236 rsq22 = gmx_mm256_calc_rsq_ps(dx22,dy22,dz22);
2238 rinv00 = avx256_invsqrt_f(rsq00);
2239 rinv01 = avx256_invsqrt_f(rsq01);
2240 rinv02 = avx256_invsqrt_f(rsq02);
2241 rinv10 = avx256_invsqrt_f(rsq10);
2242 rinv11 = avx256_invsqrt_f(rsq11);
2243 rinv12 = avx256_invsqrt_f(rsq12);
2244 rinv20 = avx256_invsqrt_f(rsq20);
2245 rinv21 = avx256_invsqrt_f(rsq21);
2246 rinv22 = avx256_invsqrt_f(rsq22);
2248 rinvsq00 = _mm256_mul_ps(rinv00,rinv00);
2250 fjx0 = _mm256_setzero_ps();
2251 fjy0 = _mm256_setzero_ps();
2252 fjz0 = _mm256_setzero_ps();
2253 fjx1 = _mm256_setzero_ps();
2254 fjy1 = _mm256_setzero_ps();
2255 fjz1 = _mm256_setzero_ps();
2256 fjx2 = _mm256_setzero_ps();
2257 fjy2 = _mm256_setzero_ps();
2258 fjz2 = _mm256_setzero_ps();
2260 /**************************
2261 * CALCULATE INTERACTIONS *
2262 **************************/
2264 r00 = _mm256_mul_ps(rsq00,rinv00);
2265 r00 = _mm256_andnot_ps(dummy_mask,r00);
2267 /* Calculate table index by multiplying r with table scale and truncate to integer */
2268 rt = _mm256_mul_ps(r00,vftabscale);
2269 vfitab = _mm256_cvttps_epi32(rt);
2270 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2271 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2272 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2273 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2274 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2275 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2277 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2278 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2279 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2280 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2281 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2282 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2283 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2284 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2285 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2286 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2287 Heps = _mm256_mul_ps(vfeps,H);
2288 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2289 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2290 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq00,FF),_mm256_mul_ps(vftabscale,rinv00)));
2292 /* LENNARD-JONES DISPERSION/REPULSION */
2294 rinvsix = _mm256_mul_ps(_mm256_mul_ps(rinvsq00,rinvsq00),rinvsq00);
2295 fvdw = _mm256_mul_ps(_mm256_sub_ps(_mm256_mul_ps(c12_00,rinvsix),c6_00),_mm256_mul_ps(rinvsix,rinvsq00));
2297 fscal = _mm256_add_ps(felec,fvdw);
2299 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2301 /* Calculate temporary vectorial force */
2302 tx = _mm256_mul_ps(fscal,dx00);
2303 ty = _mm256_mul_ps(fscal,dy00);
2304 tz = _mm256_mul_ps(fscal,dz00);
2306 /* Update vectorial force */
2307 fix0 = _mm256_add_ps(fix0,tx);
2308 fiy0 = _mm256_add_ps(fiy0,ty);
2309 fiz0 = _mm256_add_ps(fiz0,tz);
2311 fjx0 = _mm256_add_ps(fjx0,tx);
2312 fjy0 = _mm256_add_ps(fjy0,ty);
2313 fjz0 = _mm256_add_ps(fjz0,tz);
2315 /**************************
2316 * CALCULATE INTERACTIONS *
2317 **************************/
2319 r01 = _mm256_mul_ps(rsq01,rinv01);
2320 r01 = _mm256_andnot_ps(dummy_mask,r01);
2322 /* Calculate table index by multiplying r with table scale and truncate to integer */
2323 rt = _mm256_mul_ps(r01,vftabscale);
2324 vfitab = _mm256_cvttps_epi32(rt);
2325 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2326 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2327 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2328 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2329 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2330 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2332 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2333 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2334 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2335 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2336 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2337 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2338 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2339 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2340 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2341 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2342 Heps = _mm256_mul_ps(vfeps,H);
2343 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2344 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2345 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq01,FF),_mm256_mul_ps(vftabscale,rinv01)));
2349 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2351 /* Calculate temporary vectorial force */
2352 tx = _mm256_mul_ps(fscal,dx01);
2353 ty = _mm256_mul_ps(fscal,dy01);
2354 tz = _mm256_mul_ps(fscal,dz01);
2356 /* Update vectorial force */
2357 fix0 = _mm256_add_ps(fix0,tx);
2358 fiy0 = _mm256_add_ps(fiy0,ty);
2359 fiz0 = _mm256_add_ps(fiz0,tz);
2361 fjx1 = _mm256_add_ps(fjx1,tx);
2362 fjy1 = _mm256_add_ps(fjy1,ty);
2363 fjz1 = _mm256_add_ps(fjz1,tz);
2365 /**************************
2366 * CALCULATE INTERACTIONS *
2367 **************************/
2369 r02 = _mm256_mul_ps(rsq02,rinv02);
2370 r02 = _mm256_andnot_ps(dummy_mask,r02);
2372 /* Calculate table index by multiplying r with table scale and truncate to integer */
2373 rt = _mm256_mul_ps(r02,vftabscale);
2374 vfitab = _mm256_cvttps_epi32(rt);
2375 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2376 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2377 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2378 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2379 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2380 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2382 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2383 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2384 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2385 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2386 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2387 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2388 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2389 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2390 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2391 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2392 Heps = _mm256_mul_ps(vfeps,H);
2393 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2394 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2395 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq02,FF),_mm256_mul_ps(vftabscale,rinv02)));
2399 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2401 /* Calculate temporary vectorial force */
2402 tx = _mm256_mul_ps(fscal,dx02);
2403 ty = _mm256_mul_ps(fscal,dy02);
2404 tz = _mm256_mul_ps(fscal,dz02);
2406 /* Update vectorial force */
2407 fix0 = _mm256_add_ps(fix0,tx);
2408 fiy0 = _mm256_add_ps(fiy0,ty);
2409 fiz0 = _mm256_add_ps(fiz0,tz);
2411 fjx2 = _mm256_add_ps(fjx2,tx);
2412 fjy2 = _mm256_add_ps(fjy2,ty);
2413 fjz2 = _mm256_add_ps(fjz2,tz);
2415 /**************************
2416 * CALCULATE INTERACTIONS *
2417 **************************/
2419 r10 = _mm256_mul_ps(rsq10,rinv10);
2420 r10 = _mm256_andnot_ps(dummy_mask,r10);
2422 /* Calculate table index by multiplying r with table scale and truncate to integer */
2423 rt = _mm256_mul_ps(r10,vftabscale);
2424 vfitab = _mm256_cvttps_epi32(rt);
2425 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2426 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2427 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2428 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2429 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2430 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2432 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2433 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2434 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2435 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2436 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2437 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2438 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2439 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2440 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2441 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2442 Heps = _mm256_mul_ps(vfeps,H);
2443 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2444 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2445 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq10,FF),_mm256_mul_ps(vftabscale,rinv10)));
2449 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2451 /* Calculate temporary vectorial force */
2452 tx = _mm256_mul_ps(fscal,dx10);
2453 ty = _mm256_mul_ps(fscal,dy10);
2454 tz = _mm256_mul_ps(fscal,dz10);
2456 /* Update vectorial force */
2457 fix1 = _mm256_add_ps(fix1,tx);
2458 fiy1 = _mm256_add_ps(fiy1,ty);
2459 fiz1 = _mm256_add_ps(fiz1,tz);
2461 fjx0 = _mm256_add_ps(fjx0,tx);
2462 fjy0 = _mm256_add_ps(fjy0,ty);
2463 fjz0 = _mm256_add_ps(fjz0,tz);
2465 /**************************
2466 * CALCULATE INTERACTIONS *
2467 **************************/
2469 r11 = _mm256_mul_ps(rsq11,rinv11);
2470 r11 = _mm256_andnot_ps(dummy_mask,r11);
2472 /* Calculate table index by multiplying r with table scale and truncate to integer */
2473 rt = _mm256_mul_ps(r11,vftabscale);
2474 vfitab = _mm256_cvttps_epi32(rt);
2475 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2476 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2477 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2478 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2479 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2480 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2482 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2483 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2484 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2485 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2486 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2487 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2488 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2489 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2490 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2491 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2492 Heps = _mm256_mul_ps(vfeps,H);
2493 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2494 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2495 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq11,FF),_mm256_mul_ps(vftabscale,rinv11)));
2499 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2501 /* Calculate temporary vectorial force */
2502 tx = _mm256_mul_ps(fscal,dx11);
2503 ty = _mm256_mul_ps(fscal,dy11);
2504 tz = _mm256_mul_ps(fscal,dz11);
2506 /* Update vectorial force */
2507 fix1 = _mm256_add_ps(fix1,tx);
2508 fiy1 = _mm256_add_ps(fiy1,ty);
2509 fiz1 = _mm256_add_ps(fiz1,tz);
2511 fjx1 = _mm256_add_ps(fjx1,tx);
2512 fjy1 = _mm256_add_ps(fjy1,ty);
2513 fjz1 = _mm256_add_ps(fjz1,tz);
2515 /**************************
2516 * CALCULATE INTERACTIONS *
2517 **************************/
2519 r12 = _mm256_mul_ps(rsq12,rinv12);
2520 r12 = _mm256_andnot_ps(dummy_mask,r12);
2522 /* Calculate table index by multiplying r with table scale and truncate to integer */
2523 rt = _mm256_mul_ps(r12,vftabscale);
2524 vfitab = _mm256_cvttps_epi32(rt);
2525 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2526 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2527 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2528 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2529 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2530 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2532 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2533 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2534 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2535 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2536 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2537 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2538 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2539 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2540 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2541 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2542 Heps = _mm256_mul_ps(vfeps,H);
2543 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2544 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2545 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq12,FF),_mm256_mul_ps(vftabscale,rinv12)));
2549 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2551 /* Calculate temporary vectorial force */
2552 tx = _mm256_mul_ps(fscal,dx12);
2553 ty = _mm256_mul_ps(fscal,dy12);
2554 tz = _mm256_mul_ps(fscal,dz12);
2556 /* Update vectorial force */
2557 fix1 = _mm256_add_ps(fix1,tx);
2558 fiy1 = _mm256_add_ps(fiy1,ty);
2559 fiz1 = _mm256_add_ps(fiz1,tz);
2561 fjx2 = _mm256_add_ps(fjx2,tx);
2562 fjy2 = _mm256_add_ps(fjy2,ty);
2563 fjz2 = _mm256_add_ps(fjz2,tz);
2565 /**************************
2566 * CALCULATE INTERACTIONS *
2567 **************************/
2569 r20 = _mm256_mul_ps(rsq20,rinv20);
2570 r20 = _mm256_andnot_ps(dummy_mask,r20);
2572 /* Calculate table index by multiplying r with table scale and truncate to integer */
2573 rt = _mm256_mul_ps(r20,vftabscale);
2574 vfitab = _mm256_cvttps_epi32(rt);
2575 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2576 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2577 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2578 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2579 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2580 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2582 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2583 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2584 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2585 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2586 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2587 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2588 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2589 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2590 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2591 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2592 Heps = _mm256_mul_ps(vfeps,H);
2593 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2594 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2595 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq20,FF),_mm256_mul_ps(vftabscale,rinv20)));
2599 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2601 /* Calculate temporary vectorial force */
2602 tx = _mm256_mul_ps(fscal,dx20);
2603 ty = _mm256_mul_ps(fscal,dy20);
2604 tz = _mm256_mul_ps(fscal,dz20);
2606 /* Update vectorial force */
2607 fix2 = _mm256_add_ps(fix2,tx);
2608 fiy2 = _mm256_add_ps(fiy2,ty);
2609 fiz2 = _mm256_add_ps(fiz2,tz);
2611 fjx0 = _mm256_add_ps(fjx0,tx);
2612 fjy0 = _mm256_add_ps(fjy0,ty);
2613 fjz0 = _mm256_add_ps(fjz0,tz);
2615 /**************************
2616 * CALCULATE INTERACTIONS *
2617 **************************/
2619 r21 = _mm256_mul_ps(rsq21,rinv21);
2620 r21 = _mm256_andnot_ps(dummy_mask,r21);
2622 /* Calculate table index by multiplying r with table scale and truncate to integer */
2623 rt = _mm256_mul_ps(r21,vftabscale);
2624 vfitab = _mm256_cvttps_epi32(rt);
2625 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2626 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2627 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2628 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2629 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2630 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2632 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2633 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2634 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2635 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2636 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2637 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2638 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2639 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2640 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2641 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2642 Heps = _mm256_mul_ps(vfeps,H);
2643 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2644 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2645 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq21,FF),_mm256_mul_ps(vftabscale,rinv21)));
2649 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2651 /* Calculate temporary vectorial force */
2652 tx = _mm256_mul_ps(fscal,dx21);
2653 ty = _mm256_mul_ps(fscal,dy21);
2654 tz = _mm256_mul_ps(fscal,dz21);
2656 /* Update vectorial force */
2657 fix2 = _mm256_add_ps(fix2,tx);
2658 fiy2 = _mm256_add_ps(fiy2,ty);
2659 fiz2 = _mm256_add_ps(fiz2,tz);
2661 fjx1 = _mm256_add_ps(fjx1,tx);
2662 fjy1 = _mm256_add_ps(fjy1,ty);
2663 fjz1 = _mm256_add_ps(fjz1,tz);
2665 /**************************
2666 * CALCULATE INTERACTIONS *
2667 **************************/
2669 r22 = _mm256_mul_ps(rsq22,rinv22);
2670 r22 = _mm256_andnot_ps(dummy_mask,r22);
2672 /* Calculate table index by multiplying r with table scale and truncate to integer */
2673 rt = _mm256_mul_ps(r22,vftabscale);
2674 vfitab = _mm256_cvttps_epi32(rt);
2675 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2676 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2677 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2678 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2679 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2680 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2682 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2683 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2684 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2685 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2686 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2687 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2688 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2689 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2690 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2691 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2692 Heps = _mm256_mul_ps(vfeps,H);
2693 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2694 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2695 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq22,FF),_mm256_mul_ps(vftabscale,rinv22)));
2699 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2701 /* Calculate temporary vectorial force */
2702 tx = _mm256_mul_ps(fscal,dx22);
2703 ty = _mm256_mul_ps(fscal,dy22);
2704 tz = _mm256_mul_ps(fscal,dz22);
2706 /* Update vectorial force */
2707 fix2 = _mm256_add_ps(fix2,tx);
2708 fiy2 = _mm256_add_ps(fiy2,ty);
2709 fiz2 = _mm256_add_ps(fiz2,tz);
2711 fjx2 = _mm256_add_ps(fjx2,tx);
2712 fjy2 = _mm256_add_ps(fjy2,ty);
2713 fjz2 = _mm256_add_ps(fjz2,tz);
2715 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
2716 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
2717 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
2718 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
2719 fjptrE = (jnrlistE>=0) ? f+j_coord_offsetE : scratch;
2720 fjptrF = (jnrlistF>=0) ? f+j_coord_offsetF : scratch;
2721 fjptrG = (jnrlistG>=0) ? f+j_coord_offsetG : scratch;
2722 fjptrH = (jnrlistH>=0) ? f+j_coord_offsetH : scratch;
2724 gmx_mm256_decrement_3rvec_8ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,fjptrE,fjptrF,fjptrG,fjptrH,
2725 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
2727 /* Inner loop uses 368 flops */
2730 /* End of innermost loop */
2732 gmx_mm256_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
2733 f+i_coord_offset,fshift+i_shift_offset);
2735 /* Increment number of inner iterations */
2736 inneriter += j_index_end - j_index_start;
2738 /* Outer loop uses 18 flops */
2741 /* Increment number of outer iterations */
2744 /* Update outer/inner flops */
2746 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_F,outeriter*18 + inneriter*368);