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36 * Note: this file was generated by the GROMACS avx_256_double kernel generator.
42 #include "../nb_kernel.h"
43 #include "types/simple.h"
44 #include "gromacs/math/vec.h"
47 #include "gromacs/simd/math_x86_avx_256_double.h"
48 #include "kernelutil_x86_avx_256_double.h"
51 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwNone_GeomW4W4_VF_avx_256_double
52 * Electrostatics interaction: Ewald
53 * VdW interaction: None
54 * Geometry: Water4-Water4
55 * Calculate force/pot: PotentialAndForce
58 nb_kernel_ElecEw_VdwNone_GeomW4W4_VF_avx_256_double
59 (t_nblist * gmx_restrict nlist,
60 rvec * gmx_restrict xx,
61 rvec * gmx_restrict ff,
62 t_forcerec * gmx_restrict fr,
63 t_mdatoms * gmx_restrict mdatoms,
64 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
65 t_nrnb * gmx_restrict nrnb)
67 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
68 * just 0 for non-waters.
69 * Suffixes A,B,C,D refer to j loop unrolling done with AVX, e.g. for the four different
70 * jnr indices corresponding to data put in the four positions in the SIMD register.
72 int i_shift_offset,i_coord_offset,outeriter,inneriter;
73 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
74 int jnrA,jnrB,jnrC,jnrD;
75 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
76 int jnrlistE,jnrlistF,jnrlistG,jnrlistH;
77 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
78 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
80 real *shiftvec,*fshift,*x,*f;
81 real *fjptrA,*fjptrB,*fjptrC,*fjptrD;
83 __m256d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
84 real * vdwioffsetptr1;
85 __m256d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
86 real * vdwioffsetptr2;
87 __m256d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
88 real * vdwioffsetptr3;
89 __m256d ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
90 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
91 __m256d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
92 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
93 __m256d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
94 int vdwjidx3A,vdwjidx3B,vdwjidx3C,vdwjidx3D;
95 __m256d jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
96 __m256d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
97 __m256d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
98 __m256d dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
99 __m256d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
100 __m256d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
101 __m256d dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
102 __m256d dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
103 __m256d dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
104 __m256d dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
105 __m256d velec,felec,velecsum,facel,crf,krf,krf2;
108 __m256d ewtabscale,eweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
109 __m256d beta,beta2,beta3,zeta2,pmecorrF,pmecorrV,rinv3;
111 __m256d dummy_mask,cutoff_mask;
112 __m128 tmpmask0,tmpmask1;
113 __m256d signbit = _mm256_castsi256_pd( _mm256_set1_epi32(0x80000000) );
114 __m256d one = _mm256_set1_pd(1.0);
115 __m256d two = _mm256_set1_pd(2.0);
121 jindex = nlist->jindex;
123 shiftidx = nlist->shift;
125 shiftvec = fr->shift_vec[0];
126 fshift = fr->fshift[0];
127 facel = _mm256_set1_pd(fr->epsfac);
128 charge = mdatoms->chargeA;
130 sh_ewald = _mm256_set1_pd(fr->ic->sh_ewald);
131 beta = _mm256_set1_pd(fr->ic->ewaldcoeff_q);
132 beta2 = _mm256_mul_pd(beta,beta);
133 beta3 = _mm256_mul_pd(beta,beta2);
135 ewtab = fr->ic->tabq_coul_FDV0;
136 ewtabscale = _mm256_set1_pd(fr->ic->tabq_scale);
137 ewtabhalfspace = _mm256_set1_pd(0.5/fr->ic->tabq_scale);
139 /* Setup water-specific parameters */
140 inr = nlist->iinr[0];
141 iq1 = _mm256_mul_pd(facel,_mm256_set1_pd(charge[inr+1]));
142 iq2 = _mm256_mul_pd(facel,_mm256_set1_pd(charge[inr+2]));
143 iq3 = _mm256_mul_pd(facel,_mm256_set1_pd(charge[inr+3]));
145 jq1 = _mm256_set1_pd(charge[inr+1]);
146 jq2 = _mm256_set1_pd(charge[inr+2]);
147 jq3 = _mm256_set1_pd(charge[inr+3]);
148 qq11 = _mm256_mul_pd(iq1,jq1);
149 qq12 = _mm256_mul_pd(iq1,jq2);
150 qq13 = _mm256_mul_pd(iq1,jq3);
151 qq21 = _mm256_mul_pd(iq2,jq1);
152 qq22 = _mm256_mul_pd(iq2,jq2);
153 qq23 = _mm256_mul_pd(iq2,jq3);
154 qq31 = _mm256_mul_pd(iq3,jq1);
155 qq32 = _mm256_mul_pd(iq3,jq2);
156 qq33 = _mm256_mul_pd(iq3,jq3);
158 /* Avoid stupid compiler warnings */
159 jnrA = jnrB = jnrC = jnrD = 0;
168 for(iidx=0;iidx<4*DIM;iidx++)
173 /* Start outer loop over neighborlists */
174 for(iidx=0; iidx<nri; iidx++)
176 /* Load shift vector for this list */
177 i_shift_offset = DIM*shiftidx[iidx];
179 /* Load limits for loop over neighbors */
180 j_index_start = jindex[iidx];
181 j_index_end = jindex[iidx+1];
183 /* Get outer coordinate index */
185 i_coord_offset = DIM*inr;
187 /* Load i particle coords and add shift vector */
188 gmx_mm256_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset+DIM,
189 &ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
191 fix1 = _mm256_setzero_pd();
192 fiy1 = _mm256_setzero_pd();
193 fiz1 = _mm256_setzero_pd();
194 fix2 = _mm256_setzero_pd();
195 fiy2 = _mm256_setzero_pd();
196 fiz2 = _mm256_setzero_pd();
197 fix3 = _mm256_setzero_pd();
198 fiy3 = _mm256_setzero_pd();
199 fiz3 = _mm256_setzero_pd();
201 /* Reset potential sums */
202 velecsum = _mm256_setzero_pd();
204 /* Start inner kernel loop */
205 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
208 /* Get j neighbor index, and coordinate index */
213 j_coord_offsetA = DIM*jnrA;
214 j_coord_offsetB = DIM*jnrB;
215 j_coord_offsetC = DIM*jnrC;
216 j_coord_offsetD = DIM*jnrD;
218 /* load j atom coordinates */
219 gmx_mm256_load_3rvec_4ptr_swizzle_pd(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
220 x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
221 &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
223 /* Calculate displacement vector */
224 dx11 = _mm256_sub_pd(ix1,jx1);
225 dy11 = _mm256_sub_pd(iy1,jy1);
226 dz11 = _mm256_sub_pd(iz1,jz1);
227 dx12 = _mm256_sub_pd(ix1,jx2);
228 dy12 = _mm256_sub_pd(iy1,jy2);
229 dz12 = _mm256_sub_pd(iz1,jz2);
230 dx13 = _mm256_sub_pd(ix1,jx3);
231 dy13 = _mm256_sub_pd(iy1,jy3);
232 dz13 = _mm256_sub_pd(iz1,jz3);
233 dx21 = _mm256_sub_pd(ix2,jx1);
234 dy21 = _mm256_sub_pd(iy2,jy1);
235 dz21 = _mm256_sub_pd(iz2,jz1);
236 dx22 = _mm256_sub_pd(ix2,jx2);
237 dy22 = _mm256_sub_pd(iy2,jy2);
238 dz22 = _mm256_sub_pd(iz2,jz2);
239 dx23 = _mm256_sub_pd(ix2,jx3);
240 dy23 = _mm256_sub_pd(iy2,jy3);
241 dz23 = _mm256_sub_pd(iz2,jz3);
242 dx31 = _mm256_sub_pd(ix3,jx1);
243 dy31 = _mm256_sub_pd(iy3,jy1);
244 dz31 = _mm256_sub_pd(iz3,jz1);
245 dx32 = _mm256_sub_pd(ix3,jx2);
246 dy32 = _mm256_sub_pd(iy3,jy2);
247 dz32 = _mm256_sub_pd(iz3,jz2);
248 dx33 = _mm256_sub_pd(ix3,jx3);
249 dy33 = _mm256_sub_pd(iy3,jy3);
250 dz33 = _mm256_sub_pd(iz3,jz3);
252 /* Calculate squared distance and things based on it */
253 rsq11 = gmx_mm256_calc_rsq_pd(dx11,dy11,dz11);
254 rsq12 = gmx_mm256_calc_rsq_pd(dx12,dy12,dz12);
255 rsq13 = gmx_mm256_calc_rsq_pd(dx13,dy13,dz13);
256 rsq21 = gmx_mm256_calc_rsq_pd(dx21,dy21,dz21);
257 rsq22 = gmx_mm256_calc_rsq_pd(dx22,dy22,dz22);
258 rsq23 = gmx_mm256_calc_rsq_pd(dx23,dy23,dz23);
259 rsq31 = gmx_mm256_calc_rsq_pd(dx31,dy31,dz31);
260 rsq32 = gmx_mm256_calc_rsq_pd(dx32,dy32,dz32);
261 rsq33 = gmx_mm256_calc_rsq_pd(dx33,dy33,dz33);
263 rinv11 = gmx_mm256_invsqrt_pd(rsq11);
264 rinv12 = gmx_mm256_invsqrt_pd(rsq12);
265 rinv13 = gmx_mm256_invsqrt_pd(rsq13);
266 rinv21 = gmx_mm256_invsqrt_pd(rsq21);
267 rinv22 = gmx_mm256_invsqrt_pd(rsq22);
268 rinv23 = gmx_mm256_invsqrt_pd(rsq23);
269 rinv31 = gmx_mm256_invsqrt_pd(rsq31);
270 rinv32 = gmx_mm256_invsqrt_pd(rsq32);
271 rinv33 = gmx_mm256_invsqrt_pd(rsq33);
273 rinvsq11 = _mm256_mul_pd(rinv11,rinv11);
274 rinvsq12 = _mm256_mul_pd(rinv12,rinv12);
275 rinvsq13 = _mm256_mul_pd(rinv13,rinv13);
276 rinvsq21 = _mm256_mul_pd(rinv21,rinv21);
277 rinvsq22 = _mm256_mul_pd(rinv22,rinv22);
278 rinvsq23 = _mm256_mul_pd(rinv23,rinv23);
279 rinvsq31 = _mm256_mul_pd(rinv31,rinv31);
280 rinvsq32 = _mm256_mul_pd(rinv32,rinv32);
281 rinvsq33 = _mm256_mul_pd(rinv33,rinv33);
283 fjx1 = _mm256_setzero_pd();
284 fjy1 = _mm256_setzero_pd();
285 fjz1 = _mm256_setzero_pd();
286 fjx2 = _mm256_setzero_pd();
287 fjy2 = _mm256_setzero_pd();
288 fjz2 = _mm256_setzero_pd();
289 fjx3 = _mm256_setzero_pd();
290 fjy3 = _mm256_setzero_pd();
291 fjz3 = _mm256_setzero_pd();
293 /**************************
294 * CALCULATE INTERACTIONS *
295 **************************/
297 r11 = _mm256_mul_pd(rsq11,rinv11);
299 /* EWALD ELECTROSTATICS */
301 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
302 ewrt = _mm256_mul_pd(r11,ewtabscale);
303 ewitab = _mm256_cvttpd_epi32(ewrt);
304 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
305 ewitab = _mm_slli_epi32(ewitab,2);
306 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
307 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
308 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
309 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
310 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
311 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
312 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
313 velec = _mm256_mul_pd(qq11,_mm256_sub_pd(rinv11,velec));
314 felec = _mm256_mul_pd(_mm256_mul_pd(qq11,rinv11),_mm256_sub_pd(rinvsq11,felec));
316 /* Update potential sum for this i atom from the interaction with this j atom. */
317 velecsum = _mm256_add_pd(velecsum,velec);
321 /* Calculate temporary vectorial force */
322 tx = _mm256_mul_pd(fscal,dx11);
323 ty = _mm256_mul_pd(fscal,dy11);
324 tz = _mm256_mul_pd(fscal,dz11);
326 /* Update vectorial force */
327 fix1 = _mm256_add_pd(fix1,tx);
328 fiy1 = _mm256_add_pd(fiy1,ty);
329 fiz1 = _mm256_add_pd(fiz1,tz);
331 fjx1 = _mm256_add_pd(fjx1,tx);
332 fjy1 = _mm256_add_pd(fjy1,ty);
333 fjz1 = _mm256_add_pd(fjz1,tz);
335 /**************************
336 * CALCULATE INTERACTIONS *
337 **************************/
339 r12 = _mm256_mul_pd(rsq12,rinv12);
341 /* EWALD ELECTROSTATICS */
343 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
344 ewrt = _mm256_mul_pd(r12,ewtabscale);
345 ewitab = _mm256_cvttpd_epi32(ewrt);
346 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
347 ewitab = _mm_slli_epi32(ewitab,2);
348 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
349 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
350 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
351 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
352 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
353 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
354 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
355 velec = _mm256_mul_pd(qq12,_mm256_sub_pd(rinv12,velec));
356 felec = _mm256_mul_pd(_mm256_mul_pd(qq12,rinv12),_mm256_sub_pd(rinvsq12,felec));
358 /* Update potential sum for this i atom from the interaction with this j atom. */
359 velecsum = _mm256_add_pd(velecsum,velec);
363 /* Calculate temporary vectorial force */
364 tx = _mm256_mul_pd(fscal,dx12);
365 ty = _mm256_mul_pd(fscal,dy12);
366 tz = _mm256_mul_pd(fscal,dz12);
368 /* Update vectorial force */
369 fix1 = _mm256_add_pd(fix1,tx);
370 fiy1 = _mm256_add_pd(fiy1,ty);
371 fiz1 = _mm256_add_pd(fiz1,tz);
373 fjx2 = _mm256_add_pd(fjx2,tx);
374 fjy2 = _mm256_add_pd(fjy2,ty);
375 fjz2 = _mm256_add_pd(fjz2,tz);
377 /**************************
378 * CALCULATE INTERACTIONS *
379 **************************/
381 r13 = _mm256_mul_pd(rsq13,rinv13);
383 /* EWALD ELECTROSTATICS */
385 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
386 ewrt = _mm256_mul_pd(r13,ewtabscale);
387 ewitab = _mm256_cvttpd_epi32(ewrt);
388 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
389 ewitab = _mm_slli_epi32(ewitab,2);
390 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
391 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
392 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
393 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
394 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
395 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
396 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
397 velec = _mm256_mul_pd(qq13,_mm256_sub_pd(rinv13,velec));
398 felec = _mm256_mul_pd(_mm256_mul_pd(qq13,rinv13),_mm256_sub_pd(rinvsq13,felec));
400 /* Update potential sum for this i atom from the interaction with this j atom. */
401 velecsum = _mm256_add_pd(velecsum,velec);
405 /* Calculate temporary vectorial force */
406 tx = _mm256_mul_pd(fscal,dx13);
407 ty = _mm256_mul_pd(fscal,dy13);
408 tz = _mm256_mul_pd(fscal,dz13);
410 /* Update vectorial force */
411 fix1 = _mm256_add_pd(fix1,tx);
412 fiy1 = _mm256_add_pd(fiy1,ty);
413 fiz1 = _mm256_add_pd(fiz1,tz);
415 fjx3 = _mm256_add_pd(fjx3,tx);
416 fjy3 = _mm256_add_pd(fjy3,ty);
417 fjz3 = _mm256_add_pd(fjz3,tz);
419 /**************************
420 * CALCULATE INTERACTIONS *
421 **************************/
423 r21 = _mm256_mul_pd(rsq21,rinv21);
425 /* EWALD ELECTROSTATICS */
427 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
428 ewrt = _mm256_mul_pd(r21,ewtabscale);
429 ewitab = _mm256_cvttpd_epi32(ewrt);
430 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
431 ewitab = _mm_slli_epi32(ewitab,2);
432 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
433 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
434 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
435 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
436 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
437 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
438 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
439 velec = _mm256_mul_pd(qq21,_mm256_sub_pd(rinv21,velec));
440 felec = _mm256_mul_pd(_mm256_mul_pd(qq21,rinv21),_mm256_sub_pd(rinvsq21,felec));
442 /* Update potential sum for this i atom from the interaction with this j atom. */
443 velecsum = _mm256_add_pd(velecsum,velec);
447 /* Calculate temporary vectorial force */
448 tx = _mm256_mul_pd(fscal,dx21);
449 ty = _mm256_mul_pd(fscal,dy21);
450 tz = _mm256_mul_pd(fscal,dz21);
452 /* Update vectorial force */
453 fix2 = _mm256_add_pd(fix2,tx);
454 fiy2 = _mm256_add_pd(fiy2,ty);
455 fiz2 = _mm256_add_pd(fiz2,tz);
457 fjx1 = _mm256_add_pd(fjx1,tx);
458 fjy1 = _mm256_add_pd(fjy1,ty);
459 fjz1 = _mm256_add_pd(fjz1,tz);
461 /**************************
462 * CALCULATE INTERACTIONS *
463 **************************/
465 r22 = _mm256_mul_pd(rsq22,rinv22);
467 /* EWALD ELECTROSTATICS */
469 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
470 ewrt = _mm256_mul_pd(r22,ewtabscale);
471 ewitab = _mm256_cvttpd_epi32(ewrt);
472 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
473 ewitab = _mm_slli_epi32(ewitab,2);
474 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
475 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
476 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
477 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
478 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
479 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
480 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
481 velec = _mm256_mul_pd(qq22,_mm256_sub_pd(rinv22,velec));
482 felec = _mm256_mul_pd(_mm256_mul_pd(qq22,rinv22),_mm256_sub_pd(rinvsq22,felec));
484 /* Update potential sum for this i atom from the interaction with this j atom. */
485 velecsum = _mm256_add_pd(velecsum,velec);
489 /* Calculate temporary vectorial force */
490 tx = _mm256_mul_pd(fscal,dx22);
491 ty = _mm256_mul_pd(fscal,dy22);
492 tz = _mm256_mul_pd(fscal,dz22);
494 /* Update vectorial force */
495 fix2 = _mm256_add_pd(fix2,tx);
496 fiy2 = _mm256_add_pd(fiy2,ty);
497 fiz2 = _mm256_add_pd(fiz2,tz);
499 fjx2 = _mm256_add_pd(fjx2,tx);
500 fjy2 = _mm256_add_pd(fjy2,ty);
501 fjz2 = _mm256_add_pd(fjz2,tz);
503 /**************************
504 * CALCULATE INTERACTIONS *
505 **************************/
507 r23 = _mm256_mul_pd(rsq23,rinv23);
509 /* EWALD ELECTROSTATICS */
511 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
512 ewrt = _mm256_mul_pd(r23,ewtabscale);
513 ewitab = _mm256_cvttpd_epi32(ewrt);
514 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
515 ewitab = _mm_slli_epi32(ewitab,2);
516 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
517 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
518 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
519 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
520 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
521 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
522 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
523 velec = _mm256_mul_pd(qq23,_mm256_sub_pd(rinv23,velec));
524 felec = _mm256_mul_pd(_mm256_mul_pd(qq23,rinv23),_mm256_sub_pd(rinvsq23,felec));
526 /* Update potential sum for this i atom from the interaction with this j atom. */
527 velecsum = _mm256_add_pd(velecsum,velec);
531 /* Calculate temporary vectorial force */
532 tx = _mm256_mul_pd(fscal,dx23);
533 ty = _mm256_mul_pd(fscal,dy23);
534 tz = _mm256_mul_pd(fscal,dz23);
536 /* Update vectorial force */
537 fix2 = _mm256_add_pd(fix2,tx);
538 fiy2 = _mm256_add_pd(fiy2,ty);
539 fiz2 = _mm256_add_pd(fiz2,tz);
541 fjx3 = _mm256_add_pd(fjx3,tx);
542 fjy3 = _mm256_add_pd(fjy3,ty);
543 fjz3 = _mm256_add_pd(fjz3,tz);
545 /**************************
546 * CALCULATE INTERACTIONS *
547 **************************/
549 r31 = _mm256_mul_pd(rsq31,rinv31);
551 /* EWALD ELECTROSTATICS */
553 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
554 ewrt = _mm256_mul_pd(r31,ewtabscale);
555 ewitab = _mm256_cvttpd_epi32(ewrt);
556 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
557 ewitab = _mm_slli_epi32(ewitab,2);
558 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
559 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
560 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
561 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
562 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
563 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
564 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
565 velec = _mm256_mul_pd(qq31,_mm256_sub_pd(rinv31,velec));
566 felec = _mm256_mul_pd(_mm256_mul_pd(qq31,rinv31),_mm256_sub_pd(rinvsq31,felec));
568 /* Update potential sum for this i atom from the interaction with this j atom. */
569 velecsum = _mm256_add_pd(velecsum,velec);
573 /* Calculate temporary vectorial force */
574 tx = _mm256_mul_pd(fscal,dx31);
575 ty = _mm256_mul_pd(fscal,dy31);
576 tz = _mm256_mul_pd(fscal,dz31);
578 /* Update vectorial force */
579 fix3 = _mm256_add_pd(fix3,tx);
580 fiy3 = _mm256_add_pd(fiy3,ty);
581 fiz3 = _mm256_add_pd(fiz3,tz);
583 fjx1 = _mm256_add_pd(fjx1,tx);
584 fjy1 = _mm256_add_pd(fjy1,ty);
585 fjz1 = _mm256_add_pd(fjz1,tz);
587 /**************************
588 * CALCULATE INTERACTIONS *
589 **************************/
591 r32 = _mm256_mul_pd(rsq32,rinv32);
593 /* EWALD ELECTROSTATICS */
595 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
596 ewrt = _mm256_mul_pd(r32,ewtabscale);
597 ewitab = _mm256_cvttpd_epi32(ewrt);
598 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
599 ewitab = _mm_slli_epi32(ewitab,2);
600 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
601 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
602 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
603 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
604 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
605 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
606 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
607 velec = _mm256_mul_pd(qq32,_mm256_sub_pd(rinv32,velec));
608 felec = _mm256_mul_pd(_mm256_mul_pd(qq32,rinv32),_mm256_sub_pd(rinvsq32,felec));
610 /* Update potential sum for this i atom from the interaction with this j atom. */
611 velecsum = _mm256_add_pd(velecsum,velec);
615 /* Calculate temporary vectorial force */
616 tx = _mm256_mul_pd(fscal,dx32);
617 ty = _mm256_mul_pd(fscal,dy32);
618 tz = _mm256_mul_pd(fscal,dz32);
620 /* Update vectorial force */
621 fix3 = _mm256_add_pd(fix3,tx);
622 fiy3 = _mm256_add_pd(fiy3,ty);
623 fiz3 = _mm256_add_pd(fiz3,tz);
625 fjx2 = _mm256_add_pd(fjx2,tx);
626 fjy2 = _mm256_add_pd(fjy2,ty);
627 fjz2 = _mm256_add_pd(fjz2,tz);
629 /**************************
630 * CALCULATE INTERACTIONS *
631 **************************/
633 r33 = _mm256_mul_pd(rsq33,rinv33);
635 /* EWALD ELECTROSTATICS */
637 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
638 ewrt = _mm256_mul_pd(r33,ewtabscale);
639 ewitab = _mm256_cvttpd_epi32(ewrt);
640 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
641 ewitab = _mm_slli_epi32(ewitab,2);
642 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
643 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
644 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
645 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
646 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
647 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
648 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
649 velec = _mm256_mul_pd(qq33,_mm256_sub_pd(rinv33,velec));
650 felec = _mm256_mul_pd(_mm256_mul_pd(qq33,rinv33),_mm256_sub_pd(rinvsq33,felec));
652 /* Update potential sum for this i atom from the interaction with this j atom. */
653 velecsum = _mm256_add_pd(velecsum,velec);
657 /* Calculate temporary vectorial force */
658 tx = _mm256_mul_pd(fscal,dx33);
659 ty = _mm256_mul_pd(fscal,dy33);
660 tz = _mm256_mul_pd(fscal,dz33);
662 /* Update vectorial force */
663 fix3 = _mm256_add_pd(fix3,tx);
664 fiy3 = _mm256_add_pd(fiy3,ty);
665 fiz3 = _mm256_add_pd(fiz3,tz);
667 fjx3 = _mm256_add_pd(fjx3,tx);
668 fjy3 = _mm256_add_pd(fjy3,ty);
669 fjz3 = _mm256_add_pd(fjz3,tz);
671 fjptrA = f+j_coord_offsetA;
672 fjptrB = f+j_coord_offsetB;
673 fjptrC = f+j_coord_offsetC;
674 fjptrD = f+j_coord_offsetD;
676 gmx_mm256_decrement_3rvec_4ptr_swizzle_pd(fjptrA+DIM,fjptrB+DIM,fjptrC+DIM,fjptrD+DIM,
677 fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
679 /* Inner loop uses 369 flops */
685 /* Get j neighbor index, and coordinate index */
686 jnrlistA = jjnr[jidx];
687 jnrlistB = jjnr[jidx+1];
688 jnrlistC = jjnr[jidx+2];
689 jnrlistD = jjnr[jidx+3];
690 /* Sign of each element will be negative for non-real atoms.
691 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
692 * so use it as val = _mm_andnot_pd(mask,val) to clear dummy entries.
694 tmpmask0 = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
696 tmpmask1 = _mm_permute_ps(tmpmask0,_GMX_MM_PERMUTE(3,3,2,2));
697 tmpmask0 = _mm_permute_ps(tmpmask0,_GMX_MM_PERMUTE(1,1,0,0));
698 dummy_mask = _mm256_castps_pd(gmx_mm256_set_m128(tmpmask1,tmpmask0));
700 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
701 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
702 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
703 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
704 j_coord_offsetA = DIM*jnrA;
705 j_coord_offsetB = DIM*jnrB;
706 j_coord_offsetC = DIM*jnrC;
707 j_coord_offsetD = DIM*jnrD;
709 /* load j atom coordinates */
710 gmx_mm256_load_3rvec_4ptr_swizzle_pd(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
711 x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
712 &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
714 /* Calculate displacement vector */
715 dx11 = _mm256_sub_pd(ix1,jx1);
716 dy11 = _mm256_sub_pd(iy1,jy1);
717 dz11 = _mm256_sub_pd(iz1,jz1);
718 dx12 = _mm256_sub_pd(ix1,jx2);
719 dy12 = _mm256_sub_pd(iy1,jy2);
720 dz12 = _mm256_sub_pd(iz1,jz2);
721 dx13 = _mm256_sub_pd(ix1,jx3);
722 dy13 = _mm256_sub_pd(iy1,jy3);
723 dz13 = _mm256_sub_pd(iz1,jz3);
724 dx21 = _mm256_sub_pd(ix2,jx1);
725 dy21 = _mm256_sub_pd(iy2,jy1);
726 dz21 = _mm256_sub_pd(iz2,jz1);
727 dx22 = _mm256_sub_pd(ix2,jx2);
728 dy22 = _mm256_sub_pd(iy2,jy2);
729 dz22 = _mm256_sub_pd(iz2,jz2);
730 dx23 = _mm256_sub_pd(ix2,jx3);
731 dy23 = _mm256_sub_pd(iy2,jy3);
732 dz23 = _mm256_sub_pd(iz2,jz3);
733 dx31 = _mm256_sub_pd(ix3,jx1);
734 dy31 = _mm256_sub_pd(iy3,jy1);
735 dz31 = _mm256_sub_pd(iz3,jz1);
736 dx32 = _mm256_sub_pd(ix3,jx2);
737 dy32 = _mm256_sub_pd(iy3,jy2);
738 dz32 = _mm256_sub_pd(iz3,jz2);
739 dx33 = _mm256_sub_pd(ix3,jx3);
740 dy33 = _mm256_sub_pd(iy3,jy3);
741 dz33 = _mm256_sub_pd(iz3,jz3);
743 /* Calculate squared distance and things based on it */
744 rsq11 = gmx_mm256_calc_rsq_pd(dx11,dy11,dz11);
745 rsq12 = gmx_mm256_calc_rsq_pd(dx12,dy12,dz12);
746 rsq13 = gmx_mm256_calc_rsq_pd(dx13,dy13,dz13);
747 rsq21 = gmx_mm256_calc_rsq_pd(dx21,dy21,dz21);
748 rsq22 = gmx_mm256_calc_rsq_pd(dx22,dy22,dz22);
749 rsq23 = gmx_mm256_calc_rsq_pd(dx23,dy23,dz23);
750 rsq31 = gmx_mm256_calc_rsq_pd(dx31,dy31,dz31);
751 rsq32 = gmx_mm256_calc_rsq_pd(dx32,dy32,dz32);
752 rsq33 = gmx_mm256_calc_rsq_pd(dx33,dy33,dz33);
754 rinv11 = gmx_mm256_invsqrt_pd(rsq11);
755 rinv12 = gmx_mm256_invsqrt_pd(rsq12);
756 rinv13 = gmx_mm256_invsqrt_pd(rsq13);
757 rinv21 = gmx_mm256_invsqrt_pd(rsq21);
758 rinv22 = gmx_mm256_invsqrt_pd(rsq22);
759 rinv23 = gmx_mm256_invsqrt_pd(rsq23);
760 rinv31 = gmx_mm256_invsqrt_pd(rsq31);
761 rinv32 = gmx_mm256_invsqrt_pd(rsq32);
762 rinv33 = gmx_mm256_invsqrt_pd(rsq33);
764 rinvsq11 = _mm256_mul_pd(rinv11,rinv11);
765 rinvsq12 = _mm256_mul_pd(rinv12,rinv12);
766 rinvsq13 = _mm256_mul_pd(rinv13,rinv13);
767 rinvsq21 = _mm256_mul_pd(rinv21,rinv21);
768 rinvsq22 = _mm256_mul_pd(rinv22,rinv22);
769 rinvsq23 = _mm256_mul_pd(rinv23,rinv23);
770 rinvsq31 = _mm256_mul_pd(rinv31,rinv31);
771 rinvsq32 = _mm256_mul_pd(rinv32,rinv32);
772 rinvsq33 = _mm256_mul_pd(rinv33,rinv33);
774 fjx1 = _mm256_setzero_pd();
775 fjy1 = _mm256_setzero_pd();
776 fjz1 = _mm256_setzero_pd();
777 fjx2 = _mm256_setzero_pd();
778 fjy2 = _mm256_setzero_pd();
779 fjz2 = _mm256_setzero_pd();
780 fjx3 = _mm256_setzero_pd();
781 fjy3 = _mm256_setzero_pd();
782 fjz3 = _mm256_setzero_pd();
784 /**************************
785 * CALCULATE INTERACTIONS *
786 **************************/
788 r11 = _mm256_mul_pd(rsq11,rinv11);
789 r11 = _mm256_andnot_pd(dummy_mask,r11);
791 /* EWALD ELECTROSTATICS */
793 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
794 ewrt = _mm256_mul_pd(r11,ewtabscale);
795 ewitab = _mm256_cvttpd_epi32(ewrt);
796 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
797 ewitab = _mm_slli_epi32(ewitab,2);
798 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
799 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
800 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
801 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
802 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
803 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
804 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
805 velec = _mm256_mul_pd(qq11,_mm256_sub_pd(rinv11,velec));
806 felec = _mm256_mul_pd(_mm256_mul_pd(qq11,rinv11),_mm256_sub_pd(rinvsq11,felec));
808 /* Update potential sum for this i atom from the interaction with this j atom. */
809 velec = _mm256_andnot_pd(dummy_mask,velec);
810 velecsum = _mm256_add_pd(velecsum,velec);
814 fscal = _mm256_andnot_pd(dummy_mask,fscal);
816 /* Calculate temporary vectorial force */
817 tx = _mm256_mul_pd(fscal,dx11);
818 ty = _mm256_mul_pd(fscal,dy11);
819 tz = _mm256_mul_pd(fscal,dz11);
821 /* Update vectorial force */
822 fix1 = _mm256_add_pd(fix1,tx);
823 fiy1 = _mm256_add_pd(fiy1,ty);
824 fiz1 = _mm256_add_pd(fiz1,tz);
826 fjx1 = _mm256_add_pd(fjx1,tx);
827 fjy1 = _mm256_add_pd(fjy1,ty);
828 fjz1 = _mm256_add_pd(fjz1,tz);
830 /**************************
831 * CALCULATE INTERACTIONS *
832 **************************/
834 r12 = _mm256_mul_pd(rsq12,rinv12);
835 r12 = _mm256_andnot_pd(dummy_mask,r12);
837 /* EWALD ELECTROSTATICS */
839 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
840 ewrt = _mm256_mul_pd(r12,ewtabscale);
841 ewitab = _mm256_cvttpd_epi32(ewrt);
842 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
843 ewitab = _mm_slli_epi32(ewitab,2);
844 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
845 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
846 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
847 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
848 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
849 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
850 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
851 velec = _mm256_mul_pd(qq12,_mm256_sub_pd(rinv12,velec));
852 felec = _mm256_mul_pd(_mm256_mul_pd(qq12,rinv12),_mm256_sub_pd(rinvsq12,felec));
854 /* Update potential sum for this i atom from the interaction with this j atom. */
855 velec = _mm256_andnot_pd(dummy_mask,velec);
856 velecsum = _mm256_add_pd(velecsum,velec);
860 fscal = _mm256_andnot_pd(dummy_mask,fscal);
862 /* Calculate temporary vectorial force */
863 tx = _mm256_mul_pd(fscal,dx12);
864 ty = _mm256_mul_pd(fscal,dy12);
865 tz = _mm256_mul_pd(fscal,dz12);
867 /* Update vectorial force */
868 fix1 = _mm256_add_pd(fix1,tx);
869 fiy1 = _mm256_add_pd(fiy1,ty);
870 fiz1 = _mm256_add_pd(fiz1,tz);
872 fjx2 = _mm256_add_pd(fjx2,tx);
873 fjy2 = _mm256_add_pd(fjy2,ty);
874 fjz2 = _mm256_add_pd(fjz2,tz);
876 /**************************
877 * CALCULATE INTERACTIONS *
878 **************************/
880 r13 = _mm256_mul_pd(rsq13,rinv13);
881 r13 = _mm256_andnot_pd(dummy_mask,r13);
883 /* EWALD ELECTROSTATICS */
885 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
886 ewrt = _mm256_mul_pd(r13,ewtabscale);
887 ewitab = _mm256_cvttpd_epi32(ewrt);
888 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
889 ewitab = _mm_slli_epi32(ewitab,2);
890 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
891 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
892 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
893 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
894 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
895 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
896 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
897 velec = _mm256_mul_pd(qq13,_mm256_sub_pd(rinv13,velec));
898 felec = _mm256_mul_pd(_mm256_mul_pd(qq13,rinv13),_mm256_sub_pd(rinvsq13,felec));
900 /* Update potential sum for this i atom from the interaction with this j atom. */
901 velec = _mm256_andnot_pd(dummy_mask,velec);
902 velecsum = _mm256_add_pd(velecsum,velec);
906 fscal = _mm256_andnot_pd(dummy_mask,fscal);
908 /* Calculate temporary vectorial force */
909 tx = _mm256_mul_pd(fscal,dx13);
910 ty = _mm256_mul_pd(fscal,dy13);
911 tz = _mm256_mul_pd(fscal,dz13);
913 /* Update vectorial force */
914 fix1 = _mm256_add_pd(fix1,tx);
915 fiy1 = _mm256_add_pd(fiy1,ty);
916 fiz1 = _mm256_add_pd(fiz1,tz);
918 fjx3 = _mm256_add_pd(fjx3,tx);
919 fjy3 = _mm256_add_pd(fjy3,ty);
920 fjz3 = _mm256_add_pd(fjz3,tz);
922 /**************************
923 * CALCULATE INTERACTIONS *
924 **************************/
926 r21 = _mm256_mul_pd(rsq21,rinv21);
927 r21 = _mm256_andnot_pd(dummy_mask,r21);
929 /* EWALD ELECTROSTATICS */
931 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
932 ewrt = _mm256_mul_pd(r21,ewtabscale);
933 ewitab = _mm256_cvttpd_epi32(ewrt);
934 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
935 ewitab = _mm_slli_epi32(ewitab,2);
936 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
937 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
938 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
939 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
940 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
941 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
942 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
943 velec = _mm256_mul_pd(qq21,_mm256_sub_pd(rinv21,velec));
944 felec = _mm256_mul_pd(_mm256_mul_pd(qq21,rinv21),_mm256_sub_pd(rinvsq21,felec));
946 /* Update potential sum for this i atom from the interaction with this j atom. */
947 velec = _mm256_andnot_pd(dummy_mask,velec);
948 velecsum = _mm256_add_pd(velecsum,velec);
952 fscal = _mm256_andnot_pd(dummy_mask,fscal);
954 /* Calculate temporary vectorial force */
955 tx = _mm256_mul_pd(fscal,dx21);
956 ty = _mm256_mul_pd(fscal,dy21);
957 tz = _mm256_mul_pd(fscal,dz21);
959 /* Update vectorial force */
960 fix2 = _mm256_add_pd(fix2,tx);
961 fiy2 = _mm256_add_pd(fiy2,ty);
962 fiz2 = _mm256_add_pd(fiz2,tz);
964 fjx1 = _mm256_add_pd(fjx1,tx);
965 fjy1 = _mm256_add_pd(fjy1,ty);
966 fjz1 = _mm256_add_pd(fjz1,tz);
968 /**************************
969 * CALCULATE INTERACTIONS *
970 **************************/
972 r22 = _mm256_mul_pd(rsq22,rinv22);
973 r22 = _mm256_andnot_pd(dummy_mask,r22);
975 /* EWALD ELECTROSTATICS */
977 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
978 ewrt = _mm256_mul_pd(r22,ewtabscale);
979 ewitab = _mm256_cvttpd_epi32(ewrt);
980 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
981 ewitab = _mm_slli_epi32(ewitab,2);
982 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
983 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
984 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
985 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
986 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
987 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
988 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
989 velec = _mm256_mul_pd(qq22,_mm256_sub_pd(rinv22,velec));
990 felec = _mm256_mul_pd(_mm256_mul_pd(qq22,rinv22),_mm256_sub_pd(rinvsq22,felec));
992 /* Update potential sum for this i atom from the interaction with this j atom. */
993 velec = _mm256_andnot_pd(dummy_mask,velec);
994 velecsum = _mm256_add_pd(velecsum,velec);
998 fscal = _mm256_andnot_pd(dummy_mask,fscal);
1000 /* Calculate temporary vectorial force */
1001 tx = _mm256_mul_pd(fscal,dx22);
1002 ty = _mm256_mul_pd(fscal,dy22);
1003 tz = _mm256_mul_pd(fscal,dz22);
1005 /* Update vectorial force */
1006 fix2 = _mm256_add_pd(fix2,tx);
1007 fiy2 = _mm256_add_pd(fiy2,ty);
1008 fiz2 = _mm256_add_pd(fiz2,tz);
1010 fjx2 = _mm256_add_pd(fjx2,tx);
1011 fjy2 = _mm256_add_pd(fjy2,ty);
1012 fjz2 = _mm256_add_pd(fjz2,tz);
1014 /**************************
1015 * CALCULATE INTERACTIONS *
1016 **************************/
1018 r23 = _mm256_mul_pd(rsq23,rinv23);
1019 r23 = _mm256_andnot_pd(dummy_mask,r23);
1021 /* EWALD ELECTROSTATICS */
1023 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1024 ewrt = _mm256_mul_pd(r23,ewtabscale);
1025 ewitab = _mm256_cvttpd_epi32(ewrt);
1026 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
1027 ewitab = _mm_slli_epi32(ewitab,2);
1028 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
1029 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
1030 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
1031 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
1032 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
1033 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
1034 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
1035 velec = _mm256_mul_pd(qq23,_mm256_sub_pd(rinv23,velec));
1036 felec = _mm256_mul_pd(_mm256_mul_pd(qq23,rinv23),_mm256_sub_pd(rinvsq23,felec));
1038 /* Update potential sum for this i atom from the interaction with this j atom. */
1039 velec = _mm256_andnot_pd(dummy_mask,velec);
1040 velecsum = _mm256_add_pd(velecsum,velec);
1044 fscal = _mm256_andnot_pd(dummy_mask,fscal);
1046 /* Calculate temporary vectorial force */
1047 tx = _mm256_mul_pd(fscal,dx23);
1048 ty = _mm256_mul_pd(fscal,dy23);
1049 tz = _mm256_mul_pd(fscal,dz23);
1051 /* Update vectorial force */
1052 fix2 = _mm256_add_pd(fix2,tx);
1053 fiy2 = _mm256_add_pd(fiy2,ty);
1054 fiz2 = _mm256_add_pd(fiz2,tz);
1056 fjx3 = _mm256_add_pd(fjx3,tx);
1057 fjy3 = _mm256_add_pd(fjy3,ty);
1058 fjz3 = _mm256_add_pd(fjz3,tz);
1060 /**************************
1061 * CALCULATE INTERACTIONS *
1062 **************************/
1064 r31 = _mm256_mul_pd(rsq31,rinv31);
1065 r31 = _mm256_andnot_pd(dummy_mask,r31);
1067 /* EWALD ELECTROSTATICS */
1069 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1070 ewrt = _mm256_mul_pd(r31,ewtabscale);
1071 ewitab = _mm256_cvttpd_epi32(ewrt);
1072 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
1073 ewitab = _mm_slli_epi32(ewitab,2);
1074 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
1075 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
1076 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
1077 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
1078 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
1079 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
1080 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
1081 velec = _mm256_mul_pd(qq31,_mm256_sub_pd(rinv31,velec));
1082 felec = _mm256_mul_pd(_mm256_mul_pd(qq31,rinv31),_mm256_sub_pd(rinvsq31,felec));
1084 /* Update potential sum for this i atom from the interaction with this j atom. */
1085 velec = _mm256_andnot_pd(dummy_mask,velec);
1086 velecsum = _mm256_add_pd(velecsum,velec);
1090 fscal = _mm256_andnot_pd(dummy_mask,fscal);
1092 /* Calculate temporary vectorial force */
1093 tx = _mm256_mul_pd(fscal,dx31);
1094 ty = _mm256_mul_pd(fscal,dy31);
1095 tz = _mm256_mul_pd(fscal,dz31);
1097 /* Update vectorial force */
1098 fix3 = _mm256_add_pd(fix3,tx);
1099 fiy3 = _mm256_add_pd(fiy3,ty);
1100 fiz3 = _mm256_add_pd(fiz3,tz);
1102 fjx1 = _mm256_add_pd(fjx1,tx);
1103 fjy1 = _mm256_add_pd(fjy1,ty);
1104 fjz1 = _mm256_add_pd(fjz1,tz);
1106 /**************************
1107 * CALCULATE INTERACTIONS *
1108 **************************/
1110 r32 = _mm256_mul_pd(rsq32,rinv32);
1111 r32 = _mm256_andnot_pd(dummy_mask,r32);
1113 /* EWALD ELECTROSTATICS */
1115 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1116 ewrt = _mm256_mul_pd(r32,ewtabscale);
1117 ewitab = _mm256_cvttpd_epi32(ewrt);
1118 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
1119 ewitab = _mm_slli_epi32(ewitab,2);
1120 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
1121 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
1122 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
1123 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
1124 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
1125 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
1126 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
1127 velec = _mm256_mul_pd(qq32,_mm256_sub_pd(rinv32,velec));
1128 felec = _mm256_mul_pd(_mm256_mul_pd(qq32,rinv32),_mm256_sub_pd(rinvsq32,felec));
1130 /* Update potential sum for this i atom from the interaction with this j atom. */
1131 velec = _mm256_andnot_pd(dummy_mask,velec);
1132 velecsum = _mm256_add_pd(velecsum,velec);
1136 fscal = _mm256_andnot_pd(dummy_mask,fscal);
1138 /* Calculate temporary vectorial force */
1139 tx = _mm256_mul_pd(fscal,dx32);
1140 ty = _mm256_mul_pd(fscal,dy32);
1141 tz = _mm256_mul_pd(fscal,dz32);
1143 /* Update vectorial force */
1144 fix3 = _mm256_add_pd(fix3,tx);
1145 fiy3 = _mm256_add_pd(fiy3,ty);
1146 fiz3 = _mm256_add_pd(fiz3,tz);
1148 fjx2 = _mm256_add_pd(fjx2,tx);
1149 fjy2 = _mm256_add_pd(fjy2,ty);
1150 fjz2 = _mm256_add_pd(fjz2,tz);
1152 /**************************
1153 * CALCULATE INTERACTIONS *
1154 **************************/
1156 r33 = _mm256_mul_pd(rsq33,rinv33);
1157 r33 = _mm256_andnot_pd(dummy_mask,r33);
1159 /* EWALD ELECTROSTATICS */
1161 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1162 ewrt = _mm256_mul_pd(r33,ewtabscale);
1163 ewitab = _mm256_cvttpd_epi32(ewrt);
1164 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
1165 ewitab = _mm_slli_epi32(ewitab,2);
1166 ewtabF = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
1167 ewtabD = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
1168 ewtabV = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,2) );
1169 ewtabFn = _mm256_load_pd( ewtab + _mm_extract_epi32(ewitab,3) );
1170 GMX_MM256_FULLTRANSPOSE4_PD(ewtabF,ewtabD,ewtabV,ewtabFn);
1171 felec = _mm256_add_pd(ewtabF,_mm256_mul_pd(eweps,ewtabD));
1172 velec = _mm256_sub_pd(ewtabV,_mm256_mul_pd(_mm256_mul_pd(ewtabhalfspace,eweps),_mm256_add_pd(ewtabF,felec)));
1173 velec = _mm256_mul_pd(qq33,_mm256_sub_pd(rinv33,velec));
1174 felec = _mm256_mul_pd(_mm256_mul_pd(qq33,rinv33),_mm256_sub_pd(rinvsq33,felec));
1176 /* Update potential sum for this i atom from the interaction with this j atom. */
1177 velec = _mm256_andnot_pd(dummy_mask,velec);
1178 velecsum = _mm256_add_pd(velecsum,velec);
1182 fscal = _mm256_andnot_pd(dummy_mask,fscal);
1184 /* Calculate temporary vectorial force */
1185 tx = _mm256_mul_pd(fscal,dx33);
1186 ty = _mm256_mul_pd(fscal,dy33);
1187 tz = _mm256_mul_pd(fscal,dz33);
1189 /* Update vectorial force */
1190 fix3 = _mm256_add_pd(fix3,tx);
1191 fiy3 = _mm256_add_pd(fiy3,ty);
1192 fiz3 = _mm256_add_pd(fiz3,tz);
1194 fjx3 = _mm256_add_pd(fjx3,tx);
1195 fjy3 = _mm256_add_pd(fjy3,ty);
1196 fjz3 = _mm256_add_pd(fjz3,tz);
1198 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
1199 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
1200 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
1201 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
1203 gmx_mm256_decrement_3rvec_4ptr_swizzle_pd(fjptrA+DIM,fjptrB+DIM,fjptrC+DIM,fjptrD+DIM,
1204 fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
1206 /* Inner loop uses 378 flops */
1209 /* End of innermost loop */
1211 gmx_mm256_update_iforce_3atom_swizzle_pd(fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
1212 f+i_coord_offset+DIM,fshift+i_shift_offset);
1215 /* Update potential energies */
1216 gmx_mm256_update_1pot_pd(velecsum,kernel_data->energygrp_elec+ggid);
1218 /* Increment number of inner iterations */
1219 inneriter += j_index_end - j_index_start;
1221 /* Outer loop uses 19 flops */
1224 /* Increment number of outer iterations */
1227 /* Update outer/inner flops */
1229 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W4W4_VF,outeriter*19 + inneriter*378);
1232 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwNone_GeomW4W4_F_avx_256_double
1233 * Electrostatics interaction: Ewald
1234 * VdW interaction: None
1235 * Geometry: Water4-Water4
1236 * Calculate force/pot: Force
1239 nb_kernel_ElecEw_VdwNone_GeomW4W4_F_avx_256_double
1240 (t_nblist * gmx_restrict nlist,
1241 rvec * gmx_restrict xx,
1242 rvec * gmx_restrict ff,
1243 t_forcerec * gmx_restrict fr,
1244 t_mdatoms * gmx_restrict mdatoms,
1245 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
1246 t_nrnb * gmx_restrict nrnb)
1248 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
1249 * just 0 for non-waters.
1250 * Suffixes A,B,C,D refer to j loop unrolling done with AVX, e.g. for the four different
1251 * jnr indices corresponding to data put in the four positions in the SIMD register.
1253 int i_shift_offset,i_coord_offset,outeriter,inneriter;
1254 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1255 int jnrA,jnrB,jnrC,jnrD;
1256 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
1257 int jnrlistE,jnrlistF,jnrlistG,jnrlistH;
1258 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
1259 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
1260 real rcutoff_scalar;
1261 real *shiftvec,*fshift,*x,*f;
1262 real *fjptrA,*fjptrB,*fjptrC,*fjptrD;
1263 real scratch[4*DIM];
1264 __m256d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
1265 real * vdwioffsetptr1;
1266 __m256d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1267 real * vdwioffsetptr2;
1268 __m256d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1269 real * vdwioffsetptr3;
1270 __m256d ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
1271 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
1272 __m256d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1273 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
1274 __m256d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1275 int vdwjidx3A,vdwjidx3B,vdwjidx3C,vdwjidx3D;
1276 __m256d jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
1277 __m256d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1278 __m256d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1279 __m256d dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
1280 __m256d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1281 __m256d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1282 __m256d dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
1283 __m256d dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
1284 __m256d dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
1285 __m256d dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
1286 __m256d velec,felec,velecsum,facel,crf,krf,krf2;
1289 __m256d ewtabscale,eweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
1290 __m256d beta,beta2,beta3,zeta2,pmecorrF,pmecorrV,rinv3;
1292 __m256d dummy_mask,cutoff_mask;
1293 __m128 tmpmask0,tmpmask1;
1294 __m256d signbit = _mm256_castsi256_pd( _mm256_set1_epi32(0x80000000) );
1295 __m256d one = _mm256_set1_pd(1.0);
1296 __m256d two = _mm256_set1_pd(2.0);
1302 jindex = nlist->jindex;
1304 shiftidx = nlist->shift;
1306 shiftvec = fr->shift_vec[0];
1307 fshift = fr->fshift[0];
1308 facel = _mm256_set1_pd(fr->epsfac);
1309 charge = mdatoms->chargeA;
1311 sh_ewald = _mm256_set1_pd(fr->ic->sh_ewald);
1312 beta = _mm256_set1_pd(fr->ic->ewaldcoeff_q);
1313 beta2 = _mm256_mul_pd(beta,beta);
1314 beta3 = _mm256_mul_pd(beta,beta2);
1316 ewtab = fr->ic->tabq_coul_F;
1317 ewtabscale = _mm256_set1_pd(fr->ic->tabq_scale);
1318 ewtabhalfspace = _mm256_set1_pd(0.5/fr->ic->tabq_scale);
1320 /* Setup water-specific parameters */
1321 inr = nlist->iinr[0];
1322 iq1 = _mm256_mul_pd(facel,_mm256_set1_pd(charge[inr+1]));
1323 iq2 = _mm256_mul_pd(facel,_mm256_set1_pd(charge[inr+2]));
1324 iq3 = _mm256_mul_pd(facel,_mm256_set1_pd(charge[inr+3]));
1326 jq1 = _mm256_set1_pd(charge[inr+1]);
1327 jq2 = _mm256_set1_pd(charge[inr+2]);
1328 jq3 = _mm256_set1_pd(charge[inr+3]);
1329 qq11 = _mm256_mul_pd(iq1,jq1);
1330 qq12 = _mm256_mul_pd(iq1,jq2);
1331 qq13 = _mm256_mul_pd(iq1,jq3);
1332 qq21 = _mm256_mul_pd(iq2,jq1);
1333 qq22 = _mm256_mul_pd(iq2,jq2);
1334 qq23 = _mm256_mul_pd(iq2,jq3);
1335 qq31 = _mm256_mul_pd(iq3,jq1);
1336 qq32 = _mm256_mul_pd(iq3,jq2);
1337 qq33 = _mm256_mul_pd(iq3,jq3);
1339 /* Avoid stupid compiler warnings */
1340 jnrA = jnrB = jnrC = jnrD = 0;
1341 j_coord_offsetA = 0;
1342 j_coord_offsetB = 0;
1343 j_coord_offsetC = 0;
1344 j_coord_offsetD = 0;
1349 for(iidx=0;iidx<4*DIM;iidx++)
1351 scratch[iidx] = 0.0;
1354 /* Start outer loop over neighborlists */
1355 for(iidx=0; iidx<nri; iidx++)
1357 /* Load shift vector for this list */
1358 i_shift_offset = DIM*shiftidx[iidx];
1360 /* Load limits for loop over neighbors */
1361 j_index_start = jindex[iidx];
1362 j_index_end = jindex[iidx+1];
1364 /* Get outer coordinate index */
1366 i_coord_offset = DIM*inr;
1368 /* Load i particle coords and add shift vector */
1369 gmx_mm256_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset+DIM,
1370 &ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
1372 fix1 = _mm256_setzero_pd();
1373 fiy1 = _mm256_setzero_pd();
1374 fiz1 = _mm256_setzero_pd();
1375 fix2 = _mm256_setzero_pd();
1376 fiy2 = _mm256_setzero_pd();
1377 fiz2 = _mm256_setzero_pd();
1378 fix3 = _mm256_setzero_pd();
1379 fiy3 = _mm256_setzero_pd();
1380 fiz3 = _mm256_setzero_pd();
1382 /* Start inner kernel loop */
1383 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
1386 /* Get j neighbor index, and coordinate index */
1388 jnrB = jjnr[jidx+1];
1389 jnrC = jjnr[jidx+2];
1390 jnrD = jjnr[jidx+3];
1391 j_coord_offsetA = DIM*jnrA;
1392 j_coord_offsetB = DIM*jnrB;
1393 j_coord_offsetC = DIM*jnrC;
1394 j_coord_offsetD = DIM*jnrD;
1396 /* load j atom coordinates */
1397 gmx_mm256_load_3rvec_4ptr_swizzle_pd(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
1398 x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
1399 &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
1401 /* Calculate displacement vector */
1402 dx11 = _mm256_sub_pd(ix1,jx1);
1403 dy11 = _mm256_sub_pd(iy1,jy1);
1404 dz11 = _mm256_sub_pd(iz1,jz1);
1405 dx12 = _mm256_sub_pd(ix1,jx2);
1406 dy12 = _mm256_sub_pd(iy1,jy2);
1407 dz12 = _mm256_sub_pd(iz1,jz2);
1408 dx13 = _mm256_sub_pd(ix1,jx3);
1409 dy13 = _mm256_sub_pd(iy1,jy3);
1410 dz13 = _mm256_sub_pd(iz1,jz3);
1411 dx21 = _mm256_sub_pd(ix2,jx1);
1412 dy21 = _mm256_sub_pd(iy2,jy1);
1413 dz21 = _mm256_sub_pd(iz2,jz1);
1414 dx22 = _mm256_sub_pd(ix2,jx2);
1415 dy22 = _mm256_sub_pd(iy2,jy2);
1416 dz22 = _mm256_sub_pd(iz2,jz2);
1417 dx23 = _mm256_sub_pd(ix2,jx3);
1418 dy23 = _mm256_sub_pd(iy2,jy3);
1419 dz23 = _mm256_sub_pd(iz2,jz3);
1420 dx31 = _mm256_sub_pd(ix3,jx1);
1421 dy31 = _mm256_sub_pd(iy3,jy1);
1422 dz31 = _mm256_sub_pd(iz3,jz1);
1423 dx32 = _mm256_sub_pd(ix3,jx2);
1424 dy32 = _mm256_sub_pd(iy3,jy2);
1425 dz32 = _mm256_sub_pd(iz3,jz2);
1426 dx33 = _mm256_sub_pd(ix3,jx3);
1427 dy33 = _mm256_sub_pd(iy3,jy3);
1428 dz33 = _mm256_sub_pd(iz3,jz3);
1430 /* Calculate squared distance and things based on it */
1431 rsq11 = gmx_mm256_calc_rsq_pd(dx11,dy11,dz11);
1432 rsq12 = gmx_mm256_calc_rsq_pd(dx12,dy12,dz12);
1433 rsq13 = gmx_mm256_calc_rsq_pd(dx13,dy13,dz13);
1434 rsq21 = gmx_mm256_calc_rsq_pd(dx21,dy21,dz21);
1435 rsq22 = gmx_mm256_calc_rsq_pd(dx22,dy22,dz22);
1436 rsq23 = gmx_mm256_calc_rsq_pd(dx23,dy23,dz23);
1437 rsq31 = gmx_mm256_calc_rsq_pd(dx31,dy31,dz31);
1438 rsq32 = gmx_mm256_calc_rsq_pd(dx32,dy32,dz32);
1439 rsq33 = gmx_mm256_calc_rsq_pd(dx33,dy33,dz33);
1441 rinv11 = gmx_mm256_invsqrt_pd(rsq11);
1442 rinv12 = gmx_mm256_invsqrt_pd(rsq12);
1443 rinv13 = gmx_mm256_invsqrt_pd(rsq13);
1444 rinv21 = gmx_mm256_invsqrt_pd(rsq21);
1445 rinv22 = gmx_mm256_invsqrt_pd(rsq22);
1446 rinv23 = gmx_mm256_invsqrt_pd(rsq23);
1447 rinv31 = gmx_mm256_invsqrt_pd(rsq31);
1448 rinv32 = gmx_mm256_invsqrt_pd(rsq32);
1449 rinv33 = gmx_mm256_invsqrt_pd(rsq33);
1451 rinvsq11 = _mm256_mul_pd(rinv11,rinv11);
1452 rinvsq12 = _mm256_mul_pd(rinv12,rinv12);
1453 rinvsq13 = _mm256_mul_pd(rinv13,rinv13);
1454 rinvsq21 = _mm256_mul_pd(rinv21,rinv21);
1455 rinvsq22 = _mm256_mul_pd(rinv22,rinv22);
1456 rinvsq23 = _mm256_mul_pd(rinv23,rinv23);
1457 rinvsq31 = _mm256_mul_pd(rinv31,rinv31);
1458 rinvsq32 = _mm256_mul_pd(rinv32,rinv32);
1459 rinvsq33 = _mm256_mul_pd(rinv33,rinv33);
1461 fjx1 = _mm256_setzero_pd();
1462 fjy1 = _mm256_setzero_pd();
1463 fjz1 = _mm256_setzero_pd();
1464 fjx2 = _mm256_setzero_pd();
1465 fjy2 = _mm256_setzero_pd();
1466 fjz2 = _mm256_setzero_pd();
1467 fjx3 = _mm256_setzero_pd();
1468 fjy3 = _mm256_setzero_pd();
1469 fjz3 = _mm256_setzero_pd();
1471 /**************************
1472 * CALCULATE INTERACTIONS *
1473 **************************/
1475 r11 = _mm256_mul_pd(rsq11,rinv11);
1477 /* EWALD ELECTROSTATICS */
1479 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1480 ewrt = _mm256_mul_pd(r11,ewtabscale);
1481 ewitab = _mm256_cvttpd_epi32(ewrt);
1482 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
1483 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
1484 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
1486 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
1487 felec = _mm256_mul_pd(_mm256_mul_pd(qq11,rinv11),_mm256_sub_pd(rinvsq11,felec));
1491 /* Calculate temporary vectorial force */
1492 tx = _mm256_mul_pd(fscal,dx11);
1493 ty = _mm256_mul_pd(fscal,dy11);
1494 tz = _mm256_mul_pd(fscal,dz11);
1496 /* Update vectorial force */
1497 fix1 = _mm256_add_pd(fix1,tx);
1498 fiy1 = _mm256_add_pd(fiy1,ty);
1499 fiz1 = _mm256_add_pd(fiz1,tz);
1501 fjx1 = _mm256_add_pd(fjx1,tx);
1502 fjy1 = _mm256_add_pd(fjy1,ty);
1503 fjz1 = _mm256_add_pd(fjz1,tz);
1505 /**************************
1506 * CALCULATE INTERACTIONS *
1507 **************************/
1509 r12 = _mm256_mul_pd(rsq12,rinv12);
1511 /* EWALD ELECTROSTATICS */
1513 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1514 ewrt = _mm256_mul_pd(r12,ewtabscale);
1515 ewitab = _mm256_cvttpd_epi32(ewrt);
1516 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
1517 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
1518 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
1520 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
1521 felec = _mm256_mul_pd(_mm256_mul_pd(qq12,rinv12),_mm256_sub_pd(rinvsq12,felec));
1525 /* Calculate temporary vectorial force */
1526 tx = _mm256_mul_pd(fscal,dx12);
1527 ty = _mm256_mul_pd(fscal,dy12);
1528 tz = _mm256_mul_pd(fscal,dz12);
1530 /* Update vectorial force */
1531 fix1 = _mm256_add_pd(fix1,tx);
1532 fiy1 = _mm256_add_pd(fiy1,ty);
1533 fiz1 = _mm256_add_pd(fiz1,tz);
1535 fjx2 = _mm256_add_pd(fjx2,tx);
1536 fjy2 = _mm256_add_pd(fjy2,ty);
1537 fjz2 = _mm256_add_pd(fjz2,tz);
1539 /**************************
1540 * CALCULATE INTERACTIONS *
1541 **************************/
1543 r13 = _mm256_mul_pd(rsq13,rinv13);
1545 /* EWALD ELECTROSTATICS */
1547 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1548 ewrt = _mm256_mul_pd(r13,ewtabscale);
1549 ewitab = _mm256_cvttpd_epi32(ewrt);
1550 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
1551 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
1552 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
1554 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
1555 felec = _mm256_mul_pd(_mm256_mul_pd(qq13,rinv13),_mm256_sub_pd(rinvsq13,felec));
1559 /* Calculate temporary vectorial force */
1560 tx = _mm256_mul_pd(fscal,dx13);
1561 ty = _mm256_mul_pd(fscal,dy13);
1562 tz = _mm256_mul_pd(fscal,dz13);
1564 /* Update vectorial force */
1565 fix1 = _mm256_add_pd(fix1,tx);
1566 fiy1 = _mm256_add_pd(fiy1,ty);
1567 fiz1 = _mm256_add_pd(fiz1,tz);
1569 fjx3 = _mm256_add_pd(fjx3,tx);
1570 fjy3 = _mm256_add_pd(fjy3,ty);
1571 fjz3 = _mm256_add_pd(fjz3,tz);
1573 /**************************
1574 * CALCULATE INTERACTIONS *
1575 **************************/
1577 r21 = _mm256_mul_pd(rsq21,rinv21);
1579 /* EWALD ELECTROSTATICS */
1581 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1582 ewrt = _mm256_mul_pd(r21,ewtabscale);
1583 ewitab = _mm256_cvttpd_epi32(ewrt);
1584 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
1585 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
1586 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
1588 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
1589 felec = _mm256_mul_pd(_mm256_mul_pd(qq21,rinv21),_mm256_sub_pd(rinvsq21,felec));
1593 /* Calculate temporary vectorial force */
1594 tx = _mm256_mul_pd(fscal,dx21);
1595 ty = _mm256_mul_pd(fscal,dy21);
1596 tz = _mm256_mul_pd(fscal,dz21);
1598 /* Update vectorial force */
1599 fix2 = _mm256_add_pd(fix2,tx);
1600 fiy2 = _mm256_add_pd(fiy2,ty);
1601 fiz2 = _mm256_add_pd(fiz2,tz);
1603 fjx1 = _mm256_add_pd(fjx1,tx);
1604 fjy1 = _mm256_add_pd(fjy1,ty);
1605 fjz1 = _mm256_add_pd(fjz1,tz);
1607 /**************************
1608 * CALCULATE INTERACTIONS *
1609 **************************/
1611 r22 = _mm256_mul_pd(rsq22,rinv22);
1613 /* EWALD ELECTROSTATICS */
1615 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1616 ewrt = _mm256_mul_pd(r22,ewtabscale);
1617 ewitab = _mm256_cvttpd_epi32(ewrt);
1618 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
1619 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
1620 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
1622 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
1623 felec = _mm256_mul_pd(_mm256_mul_pd(qq22,rinv22),_mm256_sub_pd(rinvsq22,felec));
1627 /* Calculate temporary vectorial force */
1628 tx = _mm256_mul_pd(fscal,dx22);
1629 ty = _mm256_mul_pd(fscal,dy22);
1630 tz = _mm256_mul_pd(fscal,dz22);
1632 /* Update vectorial force */
1633 fix2 = _mm256_add_pd(fix2,tx);
1634 fiy2 = _mm256_add_pd(fiy2,ty);
1635 fiz2 = _mm256_add_pd(fiz2,tz);
1637 fjx2 = _mm256_add_pd(fjx2,tx);
1638 fjy2 = _mm256_add_pd(fjy2,ty);
1639 fjz2 = _mm256_add_pd(fjz2,tz);
1641 /**************************
1642 * CALCULATE INTERACTIONS *
1643 **************************/
1645 r23 = _mm256_mul_pd(rsq23,rinv23);
1647 /* EWALD ELECTROSTATICS */
1649 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1650 ewrt = _mm256_mul_pd(r23,ewtabscale);
1651 ewitab = _mm256_cvttpd_epi32(ewrt);
1652 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
1653 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
1654 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
1656 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
1657 felec = _mm256_mul_pd(_mm256_mul_pd(qq23,rinv23),_mm256_sub_pd(rinvsq23,felec));
1661 /* Calculate temporary vectorial force */
1662 tx = _mm256_mul_pd(fscal,dx23);
1663 ty = _mm256_mul_pd(fscal,dy23);
1664 tz = _mm256_mul_pd(fscal,dz23);
1666 /* Update vectorial force */
1667 fix2 = _mm256_add_pd(fix2,tx);
1668 fiy2 = _mm256_add_pd(fiy2,ty);
1669 fiz2 = _mm256_add_pd(fiz2,tz);
1671 fjx3 = _mm256_add_pd(fjx3,tx);
1672 fjy3 = _mm256_add_pd(fjy3,ty);
1673 fjz3 = _mm256_add_pd(fjz3,tz);
1675 /**************************
1676 * CALCULATE INTERACTIONS *
1677 **************************/
1679 r31 = _mm256_mul_pd(rsq31,rinv31);
1681 /* EWALD ELECTROSTATICS */
1683 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1684 ewrt = _mm256_mul_pd(r31,ewtabscale);
1685 ewitab = _mm256_cvttpd_epi32(ewrt);
1686 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
1687 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
1688 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
1690 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
1691 felec = _mm256_mul_pd(_mm256_mul_pd(qq31,rinv31),_mm256_sub_pd(rinvsq31,felec));
1695 /* Calculate temporary vectorial force */
1696 tx = _mm256_mul_pd(fscal,dx31);
1697 ty = _mm256_mul_pd(fscal,dy31);
1698 tz = _mm256_mul_pd(fscal,dz31);
1700 /* Update vectorial force */
1701 fix3 = _mm256_add_pd(fix3,tx);
1702 fiy3 = _mm256_add_pd(fiy3,ty);
1703 fiz3 = _mm256_add_pd(fiz3,tz);
1705 fjx1 = _mm256_add_pd(fjx1,tx);
1706 fjy1 = _mm256_add_pd(fjy1,ty);
1707 fjz1 = _mm256_add_pd(fjz1,tz);
1709 /**************************
1710 * CALCULATE INTERACTIONS *
1711 **************************/
1713 r32 = _mm256_mul_pd(rsq32,rinv32);
1715 /* EWALD ELECTROSTATICS */
1717 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1718 ewrt = _mm256_mul_pd(r32,ewtabscale);
1719 ewitab = _mm256_cvttpd_epi32(ewrt);
1720 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
1721 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
1722 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
1724 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
1725 felec = _mm256_mul_pd(_mm256_mul_pd(qq32,rinv32),_mm256_sub_pd(rinvsq32,felec));
1729 /* Calculate temporary vectorial force */
1730 tx = _mm256_mul_pd(fscal,dx32);
1731 ty = _mm256_mul_pd(fscal,dy32);
1732 tz = _mm256_mul_pd(fscal,dz32);
1734 /* Update vectorial force */
1735 fix3 = _mm256_add_pd(fix3,tx);
1736 fiy3 = _mm256_add_pd(fiy3,ty);
1737 fiz3 = _mm256_add_pd(fiz3,tz);
1739 fjx2 = _mm256_add_pd(fjx2,tx);
1740 fjy2 = _mm256_add_pd(fjy2,ty);
1741 fjz2 = _mm256_add_pd(fjz2,tz);
1743 /**************************
1744 * CALCULATE INTERACTIONS *
1745 **************************/
1747 r33 = _mm256_mul_pd(rsq33,rinv33);
1749 /* EWALD ELECTROSTATICS */
1751 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1752 ewrt = _mm256_mul_pd(r33,ewtabscale);
1753 ewitab = _mm256_cvttpd_epi32(ewrt);
1754 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
1755 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
1756 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
1758 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
1759 felec = _mm256_mul_pd(_mm256_mul_pd(qq33,rinv33),_mm256_sub_pd(rinvsq33,felec));
1763 /* Calculate temporary vectorial force */
1764 tx = _mm256_mul_pd(fscal,dx33);
1765 ty = _mm256_mul_pd(fscal,dy33);
1766 tz = _mm256_mul_pd(fscal,dz33);
1768 /* Update vectorial force */
1769 fix3 = _mm256_add_pd(fix3,tx);
1770 fiy3 = _mm256_add_pd(fiy3,ty);
1771 fiz3 = _mm256_add_pd(fiz3,tz);
1773 fjx3 = _mm256_add_pd(fjx3,tx);
1774 fjy3 = _mm256_add_pd(fjy3,ty);
1775 fjz3 = _mm256_add_pd(fjz3,tz);
1777 fjptrA = f+j_coord_offsetA;
1778 fjptrB = f+j_coord_offsetB;
1779 fjptrC = f+j_coord_offsetC;
1780 fjptrD = f+j_coord_offsetD;
1782 gmx_mm256_decrement_3rvec_4ptr_swizzle_pd(fjptrA+DIM,fjptrB+DIM,fjptrC+DIM,fjptrD+DIM,
1783 fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
1785 /* Inner loop uses 324 flops */
1788 if(jidx<j_index_end)
1791 /* Get j neighbor index, and coordinate index */
1792 jnrlistA = jjnr[jidx];
1793 jnrlistB = jjnr[jidx+1];
1794 jnrlistC = jjnr[jidx+2];
1795 jnrlistD = jjnr[jidx+3];
1796 /* Sign of each element will be negative for non-real atoms.
1797 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
1798 * so use it as val = _mm_andnot_pd(mask,val) to clear dummy entries.
1800 tmpmask0 = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
1802 tmpmask1 = _mm_permute_ps(tmpmask0,_GMX_MM_PERMUTE(3,3,2,2));
1803 tmpmask0 = _mm_permute_ps(tmpmask0,_GMX_MM_PERMUTE(1,1,0,0));
1804 dummy_mask = _mm256_castps_pd(gmx_mm256_set_m128(tmpmask1,tmpmask0));
1806 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
1807 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
1808 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
1809 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
1810 j_coord_offsetA = DIM*jnrA;
1811 j_coord_offsetB = DIM*jnrB;
1812 j_coord_offsetC = DIM*jnrC;
1813 j_coord_offsetD = DIM*jnrD;
1815 /* load j atom coordinates */
1816 gmx_mm256_load_3rvec_4ptr_swizzle_pd(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
1817 x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
1818 &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
1820 /* Calculate displacement vector */
1821 dx11 = _mm256_sub_pd(ix1,jx1);
1822 dy11 = _mm256_sub_pd(iy1,jy1);
1823 dz11 = _mm256_sub_pd(iz1,jz1);
1824 dx12 = _mm256_sub_pd(ix1,jx2);
1825 dy12 = _mm256_sub_pd(iy1,jy2);
1826 dz12 = _mm256_sub_pd(iz1,jz2);
1827 dx13 = _mm256_sub_pd(ix1,jx3);
1828 dy13 = _mm256_sub_pd(iy1,jy3);
1829 dz13 = _mm256_sub_pd(iz1,jz3);
1830 dx21 = _mm256_sub_pd(ix2,jx1);
1831 dy21 = _mm256_sub_pd(iy2,jy1);
1832 dz21 = _mm256_sub_pd(iz2,jz1);
1833 dx22 = _mm256_sub_pd(ix2,jx2);
1834 dy22 = _mm256_sub_pd(iy2,jy2);
1835 dz22 = _mm256_sub_pd(iz2,jz2);
1836 dx23 = _mm256_sub_pd(ix2,jx3);
1837 dy23 = _mm256_sub_pd(iy2,jy3);
1838 dz23 = _mm256_sub_pd(iz2,jz3);
1839 dx31 = _mm256_sub_pd(ix3,jx1);
1840 dy31 = _mm256_sub_pd(iy3,jy1);
1841 dz31 = _mm256_sub_pd(iz3,jz1);
1842 dx32 = _mm256_sub_pd(ix3,jx2);
1843 dy32 = _mm256_sub_pd(iy3,jy2);
1844 dz32 = _mm256_sub_pd(iz3,jz2);
1845 dx33 = _mm256_sub_pd(ix3,jx3);
1846 dy33 = _mm256_sub_pd(iy3,jy3);
1847 dz33 = _mm256_sub_pd(iz3,jz3);
1849 /* Calculate squared distance and things based on it */
1850 rsq11 = gmx_mm256_calc_rsq_pd(dx11,dy11,dz11);
1851 rsq12 = gmx_mm256_calc_rsq_pd(dx12,dy12,dz12);
1852 rsq13 = gmx_mm256_calc_rsq_pd(dx13,dy13,dz13);
1853 rsq21 = gmx_mm256_calc_rsq_pd(dx21,dy21,dz21);
1854 rsq22 = gmx_mm256_calc_rsq_pd(dx22,dy22,dz22);
1855 rsq23 = gmx_mm256_calc_rsq_pd(dx23,dy23,dz23);
1856 rsq31 = gmx_mm256_calc_rsq_pd(dx31,dy31,dz31);
1857 rsq32 = gmx_mm256_calc_rsq_pd(dx32,dy32,dz32);
1858 rsq33 = gmx_mm256_calc_rsq_pd(dx33,dy33,dz33);
1860 rinv11 = gmx_mm256_invsqrt_pd(rsq11);
1861 rinv12 = gmx_mm256_invsqrt_pd(rsq12);
1862 rinv13 = gmx_mm256_invsqrt_pd(rsq13);
1863 rinv21 = gmx_mm256_invsqrt_pd(rsq21);
1864 rinv22 = gmx_mm256_invsqrt_pd(rsq22);
1865 rinv23 = gmx_mm256_invsqrt_pd(rsq23);
1866 rinv31 = gmx_mm256_invsqrt_pd(rsq31);
1867 rinv32 = gmx_mm256_invsqrt_pd(rsq32);
1868 rinv33 = gmx_mm256_invsqrt_pd(rsq33);
1870 rinvsq11 = _mm256_mul_pd(rinv11,rinv11);
1871 rinvsq12 = _mm256_mul_pd(rinv12,rinv12);
1872 rinvsq13 = _mm256_mul_pd(rinv13,rinv13);
1873 rinvsq21 = _mm256_mul_pd(rinv21,rinv21);
1874 rinvsq22 = _mm256_mul_pd(rinv22,rinv22);
1875 rinvsq23 = _mm256_mul_pd(rinv23,rinv23);
1876 rinvsq31 = _mm256_mul_pd(rinv31,rinv31);
1877 rinvsq32 = _mm256_mul_pd(rinv32,rinv32);
1878 rinvsq33 = _mm256_mul_pd(rinv33,rinv33);
1880 fjx1 = _mm256_setzero_pd();
1881 fjy1 = _mm256_setzero_pd();
1882 fjz1 = _mm256_setzero_pd();
1883 fjx2 = _mm256_setzero_pd();
1884 fjy2 = _mm256_setzero_pd();
1885 fjz2 = _mm256_setzero_pd();
1886 fjx3 = _mm256_setzero_pd();
1887 fjy3 = _mm256_setzero_pd();
1888 fjz3 = _mm256_setzero_pd();
1890 /**************************
1891 * CALCULATE INTERACTIONS *
1892 **************************/
1894 r11 = _mm256_mul_pd(rsq11,rinv11);
1895 r11 = _mm256_andnot_pd(dummy_mask,r11);
1897 /* EWALD ELECTROSTATICS */
1899 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1900 ewrt = _mm256_mul_pd(r11,ewtabscale);
1901 ewitab = _mm256_cvttpd_epi32(ewrt);
1902 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
1903 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
1904 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
1906 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
1907 felec = _mm256_mul_pd(_mm256_mul_pd(qq11,rinv11),_mm256_sub_pd(rinvsq11,felec));
1911 fscal = _mm256_andnot_pd(dummy_mask,fscal);
1913 /* Calculate temporary vectorial force */
1914 tx = _mm256_mul_pd(fscal,dx11);
1915 ty = _mm256_mul_pd(fscal,dy11);
1916 tz = _mm256_mul_pd(fscal,dz11);
1918 /* Update vectorial force */
1919 fix1 = _mm256_add_pd(fix1,tx);
1920 fiy1 = _mm256_add_pd(fiy1,ty);
1921 fiz1 = _mm256_add_pd(fiz1,tz);
1923 fjx1 = _mm256_add_pd(fjx1,tx);
1924 fjy1 = _mm256_add_pd(fjy1,ty);
1925 fjz1 = _mm256_add_pd(fjz1,tz);
1927 /**************************
1928 * CALCULATE INTERACTIONS *
1929 **************************/
1931 r12 = _mm256_mul_pd(rsq12,rinv12);
1932 r12 = _mm256_andnot_pd(dummy_mask,r12);
1934 /* EWALD ELECTROSTATICS */
1936 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1937 ewrt = _mm256_mul_pd(r12,ewtabscale);
1938 ewitab = _mm256_cvttpd_epi32(ewrt);
1939 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
1940 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
1941 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
1943 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
1944 felec = _mm256_mul_pd(_mm256_mul_pd(qq12,rinv12),_mm256_sub_pd(rinvsq12,felec));
1948 fscal = _mm256_andnot_pd(dummy_mask,fscal);
1950 /* Calculate temporary vectorial force */
1951 tx = _mm256_mul_pd(fscal,dx12);
1952 ty = _mm256_mul_pd(fscal,dy12);
1953 tz = _mm256_mul_pd(fscal,dz12);
1955 /* Update vectorial force */
1956 fix1 = _mm256_add_pd(fix1,tx);
1957 fiy1 = _mm256_add_pd(fiy1,ty);
1958 fiz1 = _mm256_add_pd(fiz1,tz);
1960 fjx2 = _mm256_add_pd(fjx2,tx);
1961 fjy2 = _mm256_add_pd(fjy2,ty);
1962 fjz2 = _mm256_add_pd(fjz2,tz);
1964 /**************************
1965 * CALCULATE INTERACTIONS *
1966 **************************/
1968 r13 = _mm256_mul_pd(rsq13,rinv13);
1969 r13 = _mm256_andnot_pd(dummy_mask,r13);
1971 /* EWALD ELECTROSTATICS */
1973 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1974 ewrt = _mm256_mul_pd(r13,ewtabscale);
1975 ewitab = _mm256_cvttpd_epi32(ewrt);
1976 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
1977 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
1978 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
1980 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
1981 felec = _mm256_mul_pd(_mm256_mul_pd(qq13,rinv13),_mm256_sub_pd(rinvsq13,felec));
1985 fscal = _mm256_andnot_pd(dummy_mask,fscal);
1987 /* Calculate temporary vectorial force */
1988 tx = _mm256_mul_pd(fscal,dx13);
1989 ty = _mm256_mul_pd(fscal,dy13);
1990 tz = _mm256_mul_pd(fscal,dz13);
1992 /* Update vectorial force */
1993 fix1 = _mm256_add_pd(fix1,tx);
1994 fiy1 = _mm256_add_pd(fiy1,ty);
1995 fiz1 = _mm256_add_pd(fiz1,tz);
1997 fjx3 = _mm256_add_pd(fjx3,tx);
1998 fjy3 = _mm256_add_pd(fjy3,ty);
1999 fjz3 = _mm256_add_pd(fjz3,tz);
2001 /**************************
2002 * CALCULATE INTERACTIONS *
2003 **************************/
2005 r21 = _mm256_mul_pd(rsq21,rinv21);
2006 r21 = _mm256_andnot_pd(dummy_mask,r21);
2008 /* EWALD ELECTROSTATICS */
2010 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2011 ewrt = _mm256_mul_pd(r21,ewtabscale);
2012 ewitab = _mm256_cvttpd_epi32(ewrt);
2013 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
2014 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
2015 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
2017 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
2018 felec = _mm256_mul_pd(_mm256_mul_pd(qq21,rinv21),_mm256_sub_pd(rinvsq21,felec));
2022 fscal = _mm256_andnot_pd(dummy_mask,fscal);
2024 /* Calculate temporary vectorial force */
2025 tx = _mm256_mul_pd(fscal,dx21);
2026 ty = _mm256_mul_pd(fscal,dy21);
2027 tz = _mm256_mul_pd(fscal,dz21);
2029 /* Update vectorial force */
2030 fix2 = _mm256_add_pd(fix2,tx);
2031 fiy2 = _mm256_add_pd(fiy2,ty);
2032 fiz2 = _mm256_add_pd(fiz2,tz);
2034 fjx1 = _mm256_add_pd(fjx1,tx);
2035 fjy1 = _mm256_add_pd(fjy1,ty);
2036 fjz1 = _mm256_add_pd(fjz1,tz);
2038 /**************************
2039 * CALCULATE INTERACTIONS *
2040 **************************/
2042 r22 = _mm256_mul_pd(rsq22,rinv22);
2043 r22 = _mm256_andnot_pd(dummy_mask,r22);
2045 /* EWALD ELECTROSTATICS */
2047 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2048 ewrt = _mm256_mul_pd(r22,ewtabscale);
2049 ewitab = _mm256_cvttpd_epi32(ewrt);
2050 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
2051 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
2052 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
2054 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
2055 felec = _mm256_mul_pd(_mm256_mul_pd(qq22,rinv22),_mm256_sub_pd(rinvsq22,felec));
2059 fscal = _mm256_andnot_pd(dummy_mask,fscal);
2061 /* Calculate temporary vectorial force */
2062 tx = _mm256_mul_pd(fscal,dx22);
2063 ty = _mm256_mul_pd(fscal,dy22);
2064 tz = _mm256_mul_pd(fscal,dz22);
2066 /* Update vectorial force */
2067 fix2 = _mm256_add_pd(fix2,tx);
2068 fiy2 = _mm256_add_pd(fiy2,ty);
2069 fiz2 = _mm256_add_pd(fiz2,tz);
2071 fjx2 = _mm256_add_pd(fjx2,tx);
2072 fjy2 = _mm256_add_pd(fjy2,ty);
2073 fjz2 = _mm256_add_pd(fjz2,tz);
2075 /**************************
2076 * CALCULATE INTERACTIONS *
2077 **************************/
2079 r23 = _mm256_mul_pd(rsq23,rinv23);
2080 r23 = _mm256_andnot_pd(dummy_mask,r23);
2082 /* EWALD ELECTROSTATICS */
2084 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2085 ewrt = _mm256_mul_pd(r23,ewtabscale);
2086 ewitab = _mm256_cvttpd_epi32(ewrt);
2087 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
2088 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
2089 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
2091 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
2092 felec = _mm256_mul_pd(_mm256_mul_pd(qq23,rinv23),_mm256_sub_pd(rinvsq23,felec));
2096 fscal = _mm256_andnot_pd(dummy_mask,fscal);
2098 /* Calculate temporary vectorial force */
2099 tx = _mm256_mul_pd(fscal,dx23);
2100 ty = _mm256_mul_pd(fscal,dy23);
2101 tz = _mm256_mul_pd(fscal,dz23);
2103 /* Update vectorial force */
2104 fix2 = _mm256_add_pd(fix2,tx);
2105 fiy2 = _mm256_add_pd(fiy2,ty);
2106 fiz2 = _mm256_add_pd(fiz2,tz);
2108 fjx3 = _mm256_add_pd(fjx3,tx);
2109 fjy3 = _mm256_add_pd(fjy3,ty);
2110 fjz3 = _mm256_add_pd(fjz3,tz);
2112 /**************************
2113 * CALCULATE INTERACTIONS *
2114 **************************/
2116 r31 = _mm256_mul_pd(rsq31,rinv31);
2117 r31 = _mm256_andnot_pd(dummy_mask,r31);
2119 /* EWALD ELECTROSTATICS */
2121 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2122 ewrt = _mm256_mul_pd(r31,ewtabscale);
2123 ewitab = _mm256_cvttpd_epi32(ewrt);
2124 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
2125 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
2126 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
2128 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
2129 felec = _mm256_mul_pd(_mm256_mul_pd(qq31,rinv31),_mm256_sub_pd(rinvsq31,felec));
2133 fscal = _mm256_andnot_pd(dummy_mask,fscal);
2135 /* Calculate temporary vectorial force */
2136 tx = _mm256_mul_pd(fscal,dx31);
2137 ty = _mm256_mul_pd(fscal,dy31);
2138 tz = _mm256_mul_pd(fscal,dz31);
2140 /* Update vectorial force */
2141 fix3 = _mm256_add_pd(fix3,tx);
2142 fiy3 = _mm256_add_pd(fiy3,ty);
2143 fiz3 = _mm256_add_pd(fiz3,tz);
2145 fjx1 = _mm256_add_pd(fjx1,tx);
2146 fjy1 = _mm256_add_pd(fjy1,ty);
2147 fjz1 = _mm256_add_pd(fjz1,tz);
2149 /**************************
2150 * CALCULATE INTERACTIONS *
2151 **************************/
2153 r32 = _mm256_mul_pd(rsq32,rinv32);
2154 r32 = _mm256_andnot_pd(dummy_mask,r32);
2156 /* EWALD ELECTROSTATICS */
2158 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2159 ewrt = _mm256_mul_pd(r32,ewtabscale);
2160 ewitab = _mm256_cvttpd_epi32(ewrt);
2161 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
2162 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
2163 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
2165 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
2166 felec = _mm256_mul_pd(_mm256_mul_pd(qq32,rinv32),_mm256_sub_pd(rinvsq32,felec));
2170 fscal = _mm256_andnot_pd(dummy_mask,fscal);
2172 /* Calculate temporary vectorial force */
2173 tx = _mm256_mul_pd(fscal,dx32);
2174 ty = _mm256_mul_pd(fscal,dy32);
2175 tz = _mm256_mul_pd(fscal,dz32);
2177 /* Update vectorial force */
2178 fix3 = _mm256_add_pd(fix3,tx);
2179 fiy3 = _mm256_add_pd(fiy3,ty);
2180 fiz3 = _mm256_add_pd(fiz3,tz);
2182 fjx2 = _mm256_add_pd(fjx2,tx);
2183 fjy2 = _mm256_add_pd(fjy2,ty);
2184 fjz2 = _mm256_add_pd(fjz2,tz);
2186 /**************************
2187 * CALCULATE INTERACTIONS *
2188 **************************/
2190 r33 = _mm256_mul_pd(rsq33,rinv33);
2191 r33 = _mm256_andnot_pd(dummy_mask,r33);
2193 /* EWALD ELECTROSTATICS */
2195 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2196 ewrt = _mm256_mul_pd(r33,ewtabscale);
2197 ewitab = _mm256_cvttpd_epi32(ewrt);
2198 eweps = _mm256_sub_pd(ewrt,_mm256_round_pd(ewrt, _MM_FROUND_FLOOR));
2199 gmx_mm256_load_4pair_swizzle_pd(ewtab + _mm_extract_epi32(ewitab,0),ewtab + _mm_extract_epi32(ewitab,1),
2200 ewtab + _mm_extract_epi32(ewitab,2),ewtab + _mm_extract_epi32(ewitab,3),
2202 felec = _mm256_add_pd(_mm256_mul_pd( _mm256_sub_pd(one,eweps),ewtabF),_mm256_mul_pd(eweps,ewtabFn));
2203 felec = _mm256_mul_pd(_mm256_mul_pd(qq33,rinv33),_mm256_sub_pd(rinvsq33,felec));
2207 fscal = _mm256_andnot_pd(dummy_mask,fscal);
2209 /* Calculate temporary vectorial force */
2210 tx = _mm256_mul_pd(fscal,dx33);
2211 ty = _mm256_mul_pd(fscal,dy33);
2212 tz = _mm256_mul_pd(fscal,dz33);
2214 /* Update vectorial force */
2215 fix3 = _mm256_add_pd(fix3,tx);
2216 fiy3 = _mm256_add_pd(fiy3,ty);
2217 fiz3 = _mm256_add_pd(fiz3,tz);
2219 fjx3 = _mm256_add_pd(fjx3,tx);
2220 fjy3 = _mm256_add_pd(fjy3,ty);
2221 fjz3 = _mm256_add_pd(fjz3,tz);
2223 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
2224 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
2225 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
2226 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
2228 gmx_mm256_decrement_3rvec_4ptr_swizzle_pd(fjptrA+DIM,fjptrB+DIM,fjptrC+DIM,fjptrD+DIM,
2229 fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
2231 /* Inner loop uses 333 flops */
2234 /* End of innermost loop */
2236 gmx_mm256_update_iforce_3atom_swizzle_pd(fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
2237 f+i_coord_offset+DIM,fshift+i_shift_offset);
2239 /* Increment number of inner iterations */
2240 inneriter += j_index_end - j_index_start;
2242 /* Outer loop uses 18 flops */
2245 /* Increment number of outer iterations */
2248 /* Update outer/inner flops */
2250 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W4W4_F,outeriter*18 + inneriter*333);