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36 * Note: this file was generated by the GROMACS avx_256_double kernel generator.
42 #include "../nb_kernel.h"
43 #include "types/simple.h"
44 #include "gromacs/math/vec.h"
47 #include "gromacs/simd/math_x86_avx_256_double.h"
48 #include "kernelutil_x86_avx_256_double.h"
51 * Gromacs nonbonded kernel: nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_VF_avx_256_double
52 * Electrostatics interaction: CubicSplineTable
53 * VdW interaction: LennardJones
54 * Geometry: Water4-Water4
55 * Calculate force/pot: PotentialAndForce
58 nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_VF_avx_256_double
59 (t_nblist * gmx_restrict nlist,
60 rvec * gmx_restrict xx,
61 rvec * gmx_restrict ff,
62 t_forcerec * gmx_restrict fr,
63 t_mdatoms * gmx_restrict mdatoms,
64 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
65 t_nrnb * gmx_restrict nrnb)
67 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
68 * just 0 for non-waters.
69 * Suffixes A,B,C,D refer to j loop unrolling done with AVX, e.g. for the four different
70 * jnr indices corresponding to data put in the four positions in the SIMD register.
72 int i_shift_offset,i_coord_offset,outeriter,inneriter;
73 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
74 int jnrA,jnrB,jnrC,jnrD;
75 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
76 int jnrlistE,jnrlistF,jnrlistG,jnrlistH;
77 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
78 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
80 real *shiftvec,*fshift,*x,*f;
81 real *fjptrA,*fjptrB,*fjptrC,*fjptrD;
83 __m256d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
84 real * vdwioffsetptr0;
85 __m256d ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
86 real * vdwioffsetptr1;
87 __m256d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
88 real * vdwioffsetptr2;
89 __m256d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
90 real * vdwioffsetptr3;
91 __m256d ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
92 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
93 __m256d jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
94 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
95 __m256d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
96 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
97 __m256d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
98 int vdwjidx3A,vdwjidx3B,vdwjidx3C,vdwjidx3D;
99 __m256d jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
100 __m256d dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
101 __m256d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
102 __m256d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
103 __m256d dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
104 __m256d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
105 __m256d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
106 __m256d dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
107 __m256d dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
108 __m256d dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
109 __m256d dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
110 __m256d velec,felec,velecsum,facel,crf,krf,krf2;
113 __m256d rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
116 __m256d one_sixth = _mm256_set1_pd(1.0/6.0);
117 __m256d one_twelfth = _mm256_set1_pd(1.0/12.0);
119 __m128i ifour = _mm_set1_epi32(4);
120 __m256d rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
122 __m256d dummy_mask,cutoff_mask;
123 __m128 tmpmask0,tmpmask1;
124 __m256d signbit = _mm256_castsi256_pd( _mm256_set1_epi32(0x80000000) );
125 __m256d one = _mm256_set1_pd(1.0);
126 __m256d two = _mm256_set1_pd(2.0);
132 jindex = nlist->jindex;
134 shiftidx = nlist->shift;
136 shiftvec = fr->shift_vec[0];
137 fshift = fr->fshift[0];
138 facel = _mm256_set1_pd(fr->epsfac);
139 charge = mdatoms->chargeA;
140 nvdwtype = fr->ntype;
142 vdwtype = mdatoms->typeA;
144 vftab = kernel_data->table_elec->data;
145 vftabscale = _mm256_set1_pd(kernel_data->table_elec->scale);
147 /* Setup water-specific parameters */
148 inr = nlist->iinr[0];
149 iq1 = _mm256_mul_pd(facel,_mm256_set1_pd(charge[inr+1]));
150 iq2 = _mm256_mul_pd(facel,_mm256_set1_pd(charge[inr+2]));
151 iq3 = _mm256_mul_pd(facel,_mm256_set1_pd(charge[inr+3]));
152 vdwioffsetptr0 = vdwparam+2*nvdwtype*vdwtype[inr+0];
154 jq1 = _mm256_set1_pd(charge[inr+1]);
155 jq2 = _mm256_set1_pd(charge[inr+2]);
156 jq3 = _mm256_set1_pd(charge[inr+3]);
157 vdwjidx0A = 2*vdwtype[inr+0];
158 c6_00 = _mm256_set1_pd(vdwioffsetptr0[vdwjidx0A]);
159 c12_00 = _mm256_set1_pd(vdwioffsetptr0[vdwjidx0A+1]);
160 qq11 = _mm256_mul_pd(iq1,jq1);
161 qq12 = _mm256_mul_pd(iq1,jq2);
162 qq13 = _mm256_mul_pd(iq1,jq3);
163 qq21 = _mm256_mul_pd(iq2,jq1);
164 qq22 = _mm256_mul_pd(iq2,jq2);
165 qq23 = _mm256_mul_pd(iq2,jq3);
166 qq31 = _mm256_mul_pd(iq3,jq1);
167 qq32 = _mm256_mul_pd(iq3,jq2);
168 qq33 = _mm256_mul_pd(iq3,jq3);
170 /* Avoid stupid compiler warnings */
171 jnrA = jnrB = jnrC = jnrD = 0;
180 for(iidx=0;iidx<4*DIM;iidx++)
185 /* Start outer loop over neighborlists */
186 for(iidx=0; iidx<nri; iidx++)
188 /* Load shift vector for this list */
189 i_shift_offset = DIM*shiftidx[iidx];
191 /* Load limits for loop over neighbors */
192 j_index_start = jindex[iidx];
193 j_index_end = jindex[iidx+1];
195 /* Get outer coordinate index */
197 i_coord_offset = DIM*inr;
199 /* Load i particle coords and add shift vector */
200 gmx_mm256_load_shift_and_4rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset,
201 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
203 fix0 = _mm256_setzero_pd();
204 fiy0 = _mm256_setzero_pd();
205 fiz0 = _mm256_setzero_pd();
206 fix1 = _mm256_setzero_pd();
207 fiy1 = _mm256_setzero_pd();
208 fiz1 = _mm256_setzero_pd();
209 fix2 = _mm256_setzero_pd();
210 fiy2 = _mm256_setzero_pd();
211 fiz2 = _mm256_setzero_pd();
212 fix3 = _mm256_setzero_pd();
213 fiy3 = _mm256_setzero_pd();
214 fiz3 = _mm256_setzero_pd();
216 /* Reset potential sums */
217 velecsum = _mm256_setzero_pd();
218 vvdwsum = _mm256_setzero_pd();
220 /* Start inner kernel loop */
221 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
224 /* Get j neighbor index, and coordinate index */
229 j_coord_offsetA = DIM*jnrA;
230 j_coord_offsetB = DIM*jnrB;
231 j_coord_offsetC = DIM*jnrC;
232 j_coord_offsetD = DIM*jnrD;
234 /* load j atom coordinates */
235 gmx_mm256_load_4rvec_4ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
236 x+j_coord_offsetC,x+j_coord_offsetD,
237 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,
238 &jy2,&jz2,&jx3,&jy3,&jz3);
240 /* Calculate displacement vector */
241 dx00 = _mm256_sub_pd(ix0,jx0);
242 dy00 = _mm256_sub_pd(iy0,jy0);
243 dz00 = _mm256_sub_pd(iz0,jz0);
244 dx11 = _mm256_sub_pd(ix1,jx1);
245 dy11 = _mm256_sub_pd(iy1,jy1);
246 dz11 = _mm256_sub_pd(iz1,jz1);
247 dx12 = _mm256_sub_pd(ix1,jx2);
248 dy12 = _mm256_sub_pd(iy1,jy2);
249 dz12 = _mm256_sub_pd(iz1,jz2);
250 dx13 = _mm256_sub_pd(ix1,jx3);
251 dy13 = _mm256_sub_pd(iy1,jy3);
252 dz13 = _mm256_sub_pd(iz1,jz3);
253 dx21 = _mm256_sub_pd(ix2,jx1);
254 dy21 = _mm256_sub_pd(iy2,jy1);
255 dz21 = _mm256_sub_pd(iz2,jz1);
256 dx22 = _mm256_sub_pd(ix2,jx2);
257 dy22 = _mm256_sub_pd(iy2,jy2);
258 dz22 = _mm256_sub_pd(iz2,jz2);
259 dx23 = _mm256_sub_pd(ix2,jx3);
260 dy23 = _mm256_sub_pd(iy2,jy3);
261 dz23 = _mm256_sub_pd(iz2,jz3);
262 dx31 = _mm256_sub_pd(ix3,jx1);
263 dy31 = _mm256_sub_pd(iy3,jy1);
264 dz31 = _mm256_sub_pd(iz3,jz1);
265 dx32 = _mm256_sub_pd(ix3,jx2);
266 dy32 = _mm256_sub_pd(iy3,jy2);
267 dz32 = _mm256_sub_pd(iz3,jz2);
268 dx33 = _mm256_sub_pd(ix3,jx3);
269 dy33 = _mm256_sub_pd(iy3,jy3);
270 dz33 = _mm256_sub_pd(iz3,jz3);
272 /* Calculate squared distance and things based on it */
273 rsq00 = gmx_mm256_calc_rsq_pd(dx00,dy00,dz00);
274 rsq11 = gmx_mm256_calc_rsq_pd(dx11,dy11,dz11);
275 rsq12 = gmx_mm256_calc_rsq_pd(dx12,dy12,dz12);
276 rsq13 = gmx_mm256_calc_rsq_pd(dx13,dy13,dz13);
277 rsq21 = gmx_mm256_calc_rsq_pd(dx21,dy21,dz21);
278 rsq22 = gmx_mm256_calc_rsq_pd(dx22,dy22,dz22);
279 rsq23 = gmx_mm256_calc_rsq_pd(dx23,dy23,dz23);
280 rsq31 = gmx_mm256_calc_rsq_pd(dx31,dy31,dz31);
281 rsq32 = gmx_mm256_calc_rsq_pd(dx32,dy32,dz32);
282 rsq33 = gmx_mm256_calc_rsq_pd(dx33,dy33,dz33);
284 rinv11 = gmx_mm256_invsqrt_pd(rsq11);
285 rinv12 = gmx_mm256_invsqrt_pd(rsq12);
286 rinv13 = gmx_mm256_invsqrt_pd(rsq13);
287 rinv21 = gmx_mm256_invsqrt_pd(rsq21);
288 rinv22 = gmx_mm256_invsqrt_pd(rsq22);
289 rinv23 = gmx_mm256_invsqrt_pd(rsq23);
290 rinv31 = gmx_mm256_invsqrt_pd(rsq31);
291 rinv32 = gmx_mm256_invsqrt_pd(rsq32);
292 rinv33 = gmx_mm256_invsqrt_pd(rsq33);
294 rinvsq00 = gmx_mm256_inv_pd(rsq00);
296 fjx0 = _mm256_setzero_pd();
297 fjy0 = _mm256_setzero_pd();
298 fjz0 = _mm256_setzero_pd();
299 fjx1 = _mm256_setzero_pd();
300 fjy1 = _mm256_setzero_pd();
301 fjz1 = _mm256_setzero_pd();
302 fjx2 = _mm256_setzero_pd();
303 fjy2 = _mm256_setzero_pd();
304 fjz2 = _mm256_setzero_pd();
305 fjx3 = _mm256_setzero_pd();
306 fjy3 = _mm256_setzero_pd();
307 fjz3 = _mm256_setzero_pd();
309 /**************************
310 * CALCULATE INTERACTIONS *
311 **************************/
313 /* LENNARD-JONES DISPERSION/REPULSION */
315 rinvsix = _mm256_mul_pd(_mm256_mul_pd(rinvsq00,rinvsq00),rinvsq00);
316 vvdw6 = _mm256_mul_pd(c6_00,rinvsix);
317 vvdw12 = _mm256_mul_pd(c12_00,_mm256_mul_pd(rinvsix,rinvsix));
318 vvdw = _mm256_sub_pd( _mm256_mul_pd(vvdw12,one_twelfth) , _mm256_mul_pd(vvdw6,one_sixth) );
319 fvdw = _mm256_mul_pd(_mm256_sub_pd(vvdw12,vvdw6),rinvsq00);
321 /* Update potential sum for this i atom from the interaction with this j atom. */
322 vvdwsum = _mm256_add_pd(vvdwsum,vvdw);
326 /* Calculate temporary vectorial force */
327 tx = _mm256_mul_pd(fscal,dx00);
328 ty = _mm256_mul_pd(fscal,dy00);
329 tz = _mm256_mul_pd(fscal,dz00);
331 /* Update vectorial force */
332 fix0 = _mm256_add_pd(fix0,tx);
333 fiy0 = _mm256_add_pd(fiy0,ty);
334 fiz0 = _mm256_add_pd(fiz0,tz);
336 fjx0 = _mm256_add_pd(fjx0,tx);
337 fjy0 = _mm256_add_pd(fjy0,ty);
338 fjz0 = _mm256_add_pd(fjz0,tz);
340 /**************************
341 * CALCULATE INTERACTIONS *
342 **************************/
344 r11 = _mm256_mul_pd(rsq11,rinv11);
346 /* Calculate table index by multiplying r with table scale and truncate to integer */
347 rt = _mm256_mul_pd(r11,vftabscale);
348 vfitab = _mm256_cvttpd_epi32(rt);
349 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
350 vfitab = _mm_slli_epi32(vfitab,2);
352 /* CUBIC SPLINE TABLE ELECTROSTATICS */
353 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
354 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
355 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
356 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
357 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
358 Heps = _mm256_mul_pd(vfeps,H);
359 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
360 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
361 velec = _mm256_mul_pd(qq11,VV);
362 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
363 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq11,FF),_mm256_mul_pd(vftabscale,rinv11)));
365 /* Update potential sum for this i atom from the interaction with this j atom. */
366 velecsum = _mm256_add_pd(velecsum,velec);
370 /* Calculate temporary vectorial force */
371 tx = _mm256_mul_pd(fscal,dx11);
372 ty = _mm256_mul_pd(fscal,dy11);
373 tz = _mm256_mul_pd(fscal,dz11);
375 /* Update vectorial force */
376 fix1 = _mm256_add_pd(fix1,tx);
377 fiy1 = _mm256_add_pd(fiy1,ty);
378 fiz1 = _mm256_add_pd(fiz1,tz);
380 fjx1 = _mm256_add_pd(fjx1,tx);
381 fjy1 = _mm256_add_pd(fjy1,ty);
382 fjz1 = _mm256_add_pd(fjz1,tz);
384 /**************************
385 * CALCULATE INTERACTIONS *
386 **************************/
388 r12 = _mm256_mul_pd(rsq12,rinv12);
390 /* Calculate table index by multiplying r with table scale and truncate to integer */
391 rt = _mm256_mul_pd(r12,vftabscale);
392 vfitab = _mm256_cvttpd_epi32(rt);
393 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
394 vfitab = _mm_slli_epi32(vfitab,2);
396 /* CUBIC SPLINE TABLE ELECTROSTATICS */
397 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
398 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
399 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
400 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
401 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
402 Heps = _mm256_mul_pd(vfeps,H);
403 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
404 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
405 velec = _mm256_mul_pd(qq12,VV);
406 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
407 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq12,FF),_mm256_mul_pd(vftabscale,rinv12)));
409 /* Update potential sum for this i atom from the interaction with this j atom. */
410 velecsum = _mm256_add_pd(velecsum,velec);
414 /* Calculate temporary vectorial force */
415 tx = _mm256_mul_pd(fscal,dx12);
416 ty = _mm256_mul_pd(fscal,dy12);
417 tz = _mm256_mul_pd(fscal,dz12);
419 /* Update vectorial force */
420 fix1 = _mm256_add_pd(fix1,tx);
421 fiy1 = _mm256_add_pd(fiy1,ty);
422 fiz1 = _mm256_add_pd(fiz1,tz);
424 fjx2 = _mm256_add_pd(fjx2,tx);
425 fjy2 = _mm256_add_pd(fjy2,ty);
426 fjz2 = _mm256_add_pd(fjz2,tz);
428 /**************************
429 * CALCULATE INTERACTIONS *
430 **************************/
432 r13 = _mm256_mul_pd(rsq13,rinv13);
434 /* Calculate table index by multiplying r with table scale and truncate to integer */
435 rt = _mm256_mul_pd(r13,vftabscale);
436 vfitab = _mm256_cvttpd_epi32(rt);
437 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
438 vfitab = _mm_slli_epi32(vfitab,2);
440 /* CUBIC SPLINE TABLE ELECTROSTATICS */
441 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
442 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
443 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
444 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
445 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
446 Heps = _mm256_mul_pd(vfeps,H);
447 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
448 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
449 velec = _mm256_mul_pd(qq13,VV);
450 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
451 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq13,FF),_mm256_mul_pd(vftabscale,rinv13)));
453 /* Update potential sum for this i atom from the interaction with this j atom. */
454 velecsum = _mm256_add_pd(velecsum,velec);
458 /* Calculate temporary vectorial force */
459 tx = _mm256_mul_pd(fscal,dx13);
460 ty = _mm256_mul_pd(fscal,dy13);
461 tz = _mm256_mul_pd(fscal,dz13);
463 /* Update vectorial force */
464 fix1 = _mm256_add_pd(fix1,tx);
465 fiy1 = _mm256_add_pd(fiy1,ty);
466 fiz1 = _mm256_add_pd(fiz1,tz);
468 fjx3 = _mm256_add_pd(fjx3,tx);
469 fjy3 = _mm256_add_pd(fjy3,ty);
470 fjz3 = _mm256_add_pd(fjz3,tz);
472 /**************************
473 * CALCULATE INTERACTIONS *
474 **************************/
476 r21 = _mm256_mul_pd(rsq21,rinv21);
478 /* Calculate table index by multiplying r with table scale and truncate to integer */
479 rt = _mm256_mul_pd(r21,vftabscale);
480 vfitab = _mm256_cvttpd_epi32(rt);
481 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
482 vfitab = _mm_slli_epi32(vfitab,2);
484 /* CUBIC SPLINE TABLE ELECTROSTATICS */
485 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
486 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
487 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
488 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
489 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
490 Heps = _mm256_mul_pd(vfeps,H);
491 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
492 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
493 velec = _mm256_mul_pd(qq21,VV);
494 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
495 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq21,FF),_mm256_mul_pd(vftabscale,rinv21)));
497 /* Update potential sum for this i atom from the interaction with this j atom. */
498 velecsum = _mm256_add_pd(velecsum,velec);
502 /* Calculate temporary vectorial force */
503 tx = _mm256_mul_pd(fscal,dx21);
504 ty = _mm256_mul_pd(fscal,dy21);
505 tz = _mm256_mul_pd(fscal,dz21);
507 /* Update vectorial force */
508 fix2 = _mm256_add_pd(fix2,tx);
509 fiy2 = _mm256_add_pd(fiy2,ty);
510 fiz2 = _mm256_add_pd(fiz2,tz);
512 fjx1 = _mm256_add_pd(fjx1,tx);
513 fjy1 = _mm256_add_pd(fjy1,ty);
514 fjz1 = _mm256_add_pd(fjz1,tz);
516 /**************************
517 * CALCULATE INTERACTIONS *
518 **************************/
520 r22 = _mm256_mul_pd(rsq22,rinv22);
522 /* Calculate table index by multiplying r with table scale and truncate to integer */
523 rt = _mm256_mul_pd(r22,vftabscale);
524 vfitab = _mm256_cvttpd_epi32(rt);
525 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
526 vfitab = _mm_slli_epi32(vfitab,2);
528 /* CUBIC SPLINE TABLE ELECTROSTATICS */
529 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
530 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
531 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
532 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
533 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
534 Heps = _mm256_mul_pd(vfeps,H);
535 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
536 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
537 velec = _mm256_mul_pd(qq22,VV);
538 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
539 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq22,FF),_mm256_mul_pd(vftabscale,rinv22)));
541 /* Update potential sum for this i atom from the interaction with this j atom. */
542 velecsum = _mm256_add_pd(velecsum,velec);
546 /* Calculate temporary vectorial force */
547 tx = _mm256_mul_pd(fscal,dx22);
548 ty = _mm256_mul_pd(fscal,dy22);
549 tz = _mm256_mul_pd(fscal,dz22);
551 /* Update vectorial force */
552 fix2 = _mm256_add_pd(fix2,tx);
553 fiy2 = _mm256_add_pd(fiy2,ty);
554 fiz2 = _mm256_add_pd(fiz2,tz);
556 fjx2 = _mm256_add_pd(fjx2,tx);
557 fjy2 = _mm256_add_pd(fjy2,ty);
558 fjz2 = _mm256_add_pd(fjz2,tz);
560 /**************************
561 * CALCULATE INTERACTIONS *
562 **************************/
564 r23 = _mm256_mul_pd(rsq23,rinv23);
566 /* Calculate table index by multiplying r with table scale and truncate to integer */
567 rt = _mm256_mul_pd(r23,vftabscale);
568 vfitab = _mm256_cvttpd_epi32(rt);
569 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
570 vfitab = _mm_slli_epi32(vfitab,2);
572 /* CUBIC SPLINE TABLE ELECTROSTATICS */
573 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
574 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
575 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
576 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
577 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
578 Heps = _mm256_mul_pd(vfeps,H);
579 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
580 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
581 velec = _mm256_mul_pd(qq23,VV);
582 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
583 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq23,FF),_mm256_mul_pd(vftabscale,rinv23)));
585 /* Update potential sum for this i atom from the interaction with this j atom. */
586 velecsum = _mm256_add_pd(velecsum,velec);
590 /* Calculate temporary vectorial force */
591 tx = _mm256_mul_pd(fscal,dx23);
592 ty = _mm256_mul_pd(fscal,dy23);
593 tz = _mm256_mul_pd(fscal,dz23);
595 /* Update vectorial force */
596 fix2 = _mm256_add_pd(fix2,tx);
597 fiy2 = _mm256_add_pd(fiy2,ty);
598 fiz2 = _mm256_add_pd(fiz2,tz);
600 fjx3 = _mm256_add_pd(fjx3,tx);
601 fjy3 = _mm256_add_pd(fjy3,ty);
602 fjz3 = _mm256_add_pd(fjz3,tz);
604 /**************************
605 * CALCULATE INTERACTIONS *
606 **************************/
608 r31 = _mm256_mul_pd(rsq31,rinv31);
610 /* Calculate table index by multiplying r with table scale and truncate to integer */
611 rt = _mm256_mul_pd(r31,vftabscale);
612 vfitab = _mm256_cvttpd_epi32(rt);
613 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
614 vfitab = _mm_slli_epi32(vfitab,2);
616 /* CUBIC SPLINE TABLE ELECTROSTATICS */
617 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
618 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
619 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
620 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
621 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
622 Heps = _mm256_mul_pd(vfeps,H);
623 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
624 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
625 velec = _mm256_mul_pd(qq31,VV);
626 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
627 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq31,FF),_mm256_mul_pd(vftabscale,rinv31)));
629 /* Update potential sum for this i atom from the interaction with this j atom. */
630 velecsum = _mm256_add_pd(velecsum,velec);
634 /* Calculate temporary vectorial force */
635 tx = _mm256_mul_pd(fscal,dx31);
636 ty = _mm256_mul_pd(fscal,dy31);
637 tz = _mm256_mul_pd(fscal,dz31);
639 /* Update vectorial force */
640 fix3 = _mm256_add_pd(fix3,tx);
641 fiy3 = _mm256_add_pd(fiy3,ty);
642 fiz3 = _mm256_add_pd(fiz3,tz);
644 fjx1 = _mm256_add_pd(fjx1,tx);
645 fjy1 = _mm256_add_pd(fjy1,ty);
646 fjz1 = _mm256_add_pd(fjz1,tz);
648 /**************************
649 * CALCULATE INTERACTIONS *
650 **************************/
652 r32 = _mm256_mul_pd(rsq32,rinv32);
654 /* Calculate table index by multiplying r with table scale and truncate to integer */
655 rt = _mm256_mul_pd(r32,vftabscale);
656 vfitab = _mm256_cvttpd_epi32(rt);
657 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
658 vfitab = _mm_slli_epi32(vfitab,2);
660 /* CUBIC SPLINE TABLE ELECTROSTATICS */
661 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
662 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
663 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
664 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
665 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
666 Heps = _mm256_mul_pd(vfeps,H);
667 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
668 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
669 velec = _mm256_mul_pd(qq32,VV);
670 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
671 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq32,FF),_mm256_mul_pd(vftabscale,rinv32)));
673 /* Update potential sum for this i atom from the interaction with this j atom. */
674 velecsum = _mm256_add_pd(velecsum,velec);
678 /* Calculate temporary vectorial force */
679 tx = _mm256_mul_pd(fscal,dx32);
680 ty = _mm256_mul_pd(fscal,dy32);
681 tz = _mm256_mul_pd(fscal,dz32);
683 /* Update vectorial force */
684 fix3 = _mm256_add_pd(fix3,tx);
685 fiy3 = _mm256_add_pd(fiy3,ty);
686 fiz3 = _mm256_add_pd(fiz3,tz);
688 fjx2 = _mm256_add_pd(fjx2,tx);
689 fjy2 = _mm256_add_pd(fjy2,ty);
690 fjz2 = _mm256_add_pd(fjz2,tz);
692 /**************************
693 * CALCULATE INTERACTIONS *
694 **************************/
696 r33 = _mm256_mul_pd(rsq33,rinv33);
698 /* Calculate table index by multiplying r with table scale and truncate to integer */
699 rt = _mm256_mul_pd(r33,vftabscale);
700 vfitab = _mm256_cvttpd_epi32(rt);
701 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
702 vfitab = _mm_slli_epi32(vfitab,2);
704 /* CUBIC SPLINE TABLE ELECTROSTATICS */
705 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
706 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
707 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
708 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
709 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
710 Heps = _mm256_mul_pd(vfeps,H);
711 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
712 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
713 velec = _mm256_mul_pd(qq33,VV);
714 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
715 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq33,FF),_mm256_mul_pd(vftabscale,rinv33)));
717 /* Update potential sum for this i atom from the interaction with this j atom. */
718 velecsum = _mm256_add_pd(velecsum,velec);
722 /* Calculate temporary vectorial force */
723 tx = _mm256_mul_pd(fscal,dx33);
724 ty = _mm256_mul_pd(fscal,dy33);
725 tz = _mm256_mul_pd(fscal,dz33);
727 /* Update vectorial force */
728 fix3 = _mm256_add_pd(fix3,tx);
729 fiy3 = _mm256_add_pd(fiy3,ty);
730 fiz3 = _mm256_add_pd(fiz3,tz);
732 fjx3 = _mm256_add_pd(fjx3,tx);
733 fjy3 = _mm256_add_pd(fjy3,ty);
734 fjz3 = _mm256_add_pd(fjz3,tz);
736 fjptrA = f+j_coord_offsetA;
737 fjptrB = f+j_coord_offsetB;
738 fjptrC = f+j_coord_offsetC;
739 fjptrD = f+j_coord_offsetD;
741 gmx_mm256_decrement_4rvec_4ptr_swizzle_pd(fjptrA,fjptrB,fjptrC,fjptrD,
742 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,
743 fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
745 /* Inner loop uses 422 flops */
751 /* Get j neighbor index, and coordinate index */
752 jnrlistA = jjnr[jidx];
753 jnrlistB = jjnr[jidx+1];
754 jnrlistC = jjnr[jidx+2];
755 jnrlistD = jjnr[jidx+3];
756 /* Sign of each element will be negative for non-real atoms.
757 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
758 * so use it as val = _mm_andnot_pd(mask,val) to clear dummy entries.
760 tmpmask0 = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
762 tmpmask1 = _mm_permute_ps(tmpmask0,_GMX_MM_PERMUTE(3,3,2,2));
763 tmpmask0 = _mm_permute_ps(tmpmask0,_GMX_MM_PERMUTE(1,1,0,0));
764 dummy_mask = _mm256_castps_pd(gmx_mm256_set_m128(tmpmask1,tmpmask0));
766 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
767 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
768 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
769 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
770 j_coord_offsetA = DIM*jnrA;
771 j_coord_offsetB = DIM*jnrB;
772 j_coord_offsetC = DIM*jnrC;
773 j_coord_offsetD = DIM*jnrD;
775 /* load j atom coordinates */
776 gmx_mm256_load_4rvec_4ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
777 x+j_coord_offsetC,x+j_coord_offsetD,
778 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,
779 &jy2,&jz2,&jx3,&jy3,&jz3);
781 /* Calculate displacement vector */
782 dx00 = _mm256_sub_pd(ix0,jx0);
783 dy00 = _mm256_sub_pd(iy0,jy0);
784 dz00 = _mm256_sub_pd(iz0,jz0);
785 dx11 = _mm256_sub_pd(ix1,jx1);
786 dy11 = _mm256_sub_pd(iy1,jy1);
787 dz11 = _mm256_sub_pd(iz1,jz1);
788 dx12 = _mm256_sub_pd(ix1,jx2);
789 dy12 = _mm256_sub_pd(iy1,jy2);
790 dz12 = _mm256_sub_pd(iz1,jz2);
791 dx13 = _mm256_sub_pd(ix1,jx3);
792 dy13 = _mm256_sub_pd(iy1,jy3);
793 dz13 = _mm256_sub_pd(iz1,jz3);
794 dx21 = _mm256_sub_pd(ix2,jx1);
795 dy21 = _mm256_sub_pd(iy2,jy1);
796 dz21 = _mm256_sub_pd(iz2,jz1);
797 dx22 = _mm256_sub_pd(ix2,jx2);
798 dy22 = _mm256_sub_pd(iy2,jy2);
799 dz22 = _mm256_sub_pd(iz2,jz2);
800 dx23 = _mm256_sub_pd(ix2,jx3);
801 dy23 = _mm256_sub_pd(iy2,jy3);
802 dz23 = _mm256_sub_pd(iz2,jz3);
803 dx31 = _mm256_sub_pd(ix3,jx1);
804 dy31 = _mm256_sub_pd(iy3,jy1);
805 dz31 = _mm256_sub_pd(iz3,jz1);
806 dx32 = _mm256_sub_pd(ix3,jx2);
807 dy32 = _mm256_sub_pd(iy3,jy2);
808 dz32 = _mm256_sub_pd(iz3,jz2);
809 dx33 = _mm256_sub_pd(ix3,jx3);
810 dy33 = _mm256_sub_pd(iy3,jy3);
811 dz33 = _mm256_sub_pd(iz3,jz3);
813 /* Calculate squared distance and things based on it */
814 rsq00 = gmx_mm256_calc_rsq_pd(dx00,dy00,dz00);
815 rsq11 = gmx_mm256_calc_rsq_pd(dx11,dy11,dz11);
816 rsq12 = gmx_mm256_calc_rsq_pd(dx12,dy12,dz12);
817 rsq13 = gmx_mm256_calc_rsq_pd(dx13,dy13,dz13);
818 rsq21 = gmx_mm256_calc_rsq_pd(dx21,dy21,dz21);
819 rsq22 = gmx_mm256_calc_rsq_pd(dx22,dy22,dz22);
820 rsq23 = gmx_mm256_calc_rsq_pd(dx23,dy23,dz23);
821 rsq31 = gmx_mm256_calc_rsq_pd(dx31,dy31,dz31);
822 rsq32 = gmx_mm256_calc_rsq_pd(dx32,dy32,dz32);
823 rsq33 = gmx_mm256_calc_rsq_pd(dx33,dy33,dz33);
825 rinv11 = gmx_mm256_invsqrt_pd(rsq11);
826 rinv12 = gmx_mm256_invsqrt_pd(rsq12);
827 rinv13 = gmx_mm256_invsqrt_pd(rsq13);
828 rinv21 = gmx_mm256_invsqrt_pd(rsq21);
829 rinv22 = gmx_mm256_invsqrt_pd(rsq22);
830 rinv23 = gmx_mm256_invsqrt_pd(rsq23);
831 rinv31 = gmx_mm256_invsqrt_pd(rsq31);
832 rinv32 = gmx_mm256_invsqrt_pd(rsq32);
833 rinv33 = gmx_mm256_invsqrt_pd(rsq33);
835 rinvsq00 = gmx_mm256_inv_pd(rsq00);
837 fjx0 = _mm256_setzero_pd();
838 fjy0 = _mm256_setzero_pd();
839 fjz0 = _mm256_setzero_pd();
840 fjx1 = _mm256_setzero_pd();
841 fjy1 = _mm256_setzero_pd();
842 fjz1 = _mm256_setzero_pd();
843 fjx2 = _mm256_setzero_pd();
844 fjy2 = _mm256_setzero_pd();
845 fjz2 = _mm256_setzero_pd();
846 fjx3 = _mm256_setzero_pd();
847 fjy3 = _mm256_setzero_pd();
848 fjz3 = _mm256_setzero_pd();
850 /**************************
851 * CALCULATE INTERACTIONS *
852 **************************/
854 /* LENNARD-JONES DISPERSION/REPULSION */
856 rinvsix = _mm256_mul_pd(_mm256_mul_pd(rinvsq00,rinvsq00),rinvsq00);
857 vvdw6 = _mm256_mul_pd(c6_00,rinvsix);
858 vvdw12 = _mm256_mul_pd(c12_00,_mm256_mul_pd(rinvsix,rinvsix));
859 vvdw = _mm256_sub_pd( _mm256_mul_pd(vvdw12,one_twelfth) , _mm256_mul_pd(vvdw6,one_sixth) );
860 fvdw = _mm256_mul_pd(_mm256_sub_pd(vvdw12,vvdw6),rinvsq00);
862 /* Update potential sum for this i atom from the interaction with this j atom. */
863 vvdw = _mm256_andnot_pd(dummy_mask,vvdw);
864 vvdwsum = _mm256_add_pd(vvdwsum,vvdw);
868 fscal = _mm256_andnot_pd(dummy_mask,fscal);
870 /* Calculate temporary vectorial force */
871 tx = _mm256_mul_pd(fscal,dx00);
872 ty = _mm256_mul_pd(fscal,dy00);
873 tz = _mm256_mul_pd(fscal,dz00);
875 /* Update vectorial force */
876 fix0 = _mm256_add_pd(fix0,tx);
877 fiy0 = _mm256_add_pd(fiy0,ty);
878 fiz0 = _mm256_add_pd(fiz0,tz);
880 fjx0 = _mm256_add_pd(fjx0,tx);
881 fjy0 = _mm256_add_pd(fjy0,ty);
882 fjz0 = _mm256_add_pd(fjz0,tz);
884 /**************************
885 * CALCULATE INTERACTIONS *
886 **************************/
888 r11 = _mm256_mul_pd(rsq11,rinv11);
889 r11 = _mm256_andnot_pd(dummy_mask,r11);
891 /* Calculate table index by multiplying r with table scale and truncate to integer */
892 rt = _mm256_mul_pd(r11,vftabscale);
893 vfitab = _mm256_cvttpd_epi32(rt);
894 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
895 vfitab = _mm_slli_epi32(vfitab,2);
897 /* CUBIC SPLINE TABLE ELECTROSTATICS */
898 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
899 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
900 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
901 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
902 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
903 Heps = _mm256_mul_pd(vfeps,H);
904 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
905 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
906 velec = _mm256_mul_pd(qq11,VV);
907 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
908 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq11,FF),_mm256_mul_pd(vftabscale,rinv11)));
910 /* Update potential sum for this i atom from the interaction with this j atom. */
911 velec = _mm256_andnot_pd(dummy_mask,velec);
912 velecsum = _mm256_add_pd(velecsum,velec);
916 fscal = _mm256_andnot_pd(dummy_mask,fscal);
918 /* Calculate temporary vectorial force */
919 tx = _mm256_mul_pd(fscal,dx11);
920 ty = _mm256_mul_pd(fscal,dy11);
921 tz = _mm256_mul_pd(fscal,dz11);
923 /* Update vectorial force */
924 fix1 = _mm256_add_pd(fix1,tx);
925 fiy1 = _mm256_add_pd(fiy1,ty);
926 fiz1 = _mm256_add_pd(fiz1,tz);
928 fjx1 = _mm256_add_pd(fjx1,tx);
929 fjy1 = _mm256_add_pd(fjy1,ty);
930 fjz1 = _mm256_add_pd(fjz1,tz);
932 /**************************
933 * CALCULATE INTERACTIONS *
934 **************************/
936 r12 = _mm256_mul_pd(rsq12,rinv12);
937 r12 = _mm256_andnot_pd(dummy_mask,r12);
939 /* Calculate table index by multiplying r with table scale and truncate to integer */
940 rt = _mm256_mul_pd(r12,vftabscale);
941 vfitab = _mm256_cvttpd_epi32(rt);
942 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
943 vfitab = _mm_slli_epi32(vfitab,2);
945 /* CUBIC SPLINE TABLE ELECTROSTATICS */
946 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
947 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
948 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
949 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
950 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
951 Heps = _mm256_mul_pd(vfeps,H);
952 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
953 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
954 velec = _mm256_mul_pd(qq12,VV);
955 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
956 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq12,FF),_mm256_mul_pd(vftabscale,rinv12)));
958 /* Update potential sum for this i atom from the interaction with this j atom. */
959 velec = _mm256_andnot_pd(dummy_mask,velec);
960 velecsum = _mm256_add_pd(velecsum,velec);
964 fscal = _mm256_andnot_pd(dummy_mask,fscal);
966 /* Calculate temporary vectorial force */
967 tx = _mm256_mul_pd(fscal,dx12);
968 ty = _mm256_mul_pd(fscal,dy12);
969 tz = _mm256_mul_pd(fscal,dz12);
971 /* Update vectorial force */
972 fix1 = _mm256_add_pd(fix1,tx);
973 fiy1 = _mm256_add_pd(fiy1,ty);
974 fiz1 = _mm256_add_pd(fiz1,tz);
976 fjx2 = _mm256_add_pd(fjx2,tx);
977 fjy2 = _mm256_add_pd(fjy2,ty);
978 fjz2 = _mm256_add_pd(fjz2,tz);
980 /**************************
981 * CALCULATE INTERACTIONS *
982 **************************/
984 r13 = _mm256_mul_pd(rsq13,rinv13);
985 r13 = _mm256_andnot_pd(dummy_mask,r13);
987 /* Calculate table index by multiplying r with table scale and truncate to integer */
988 rt = _mm256_mul_pd(r13,vftabscale);
989 vfitab = _mm256_cvttpd_epi32(rt);
990 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
991 vfitab = _mm_slli_epi32(vfitab,2);
993 /* CUBIC SPLINE TABLE ELECTROSTATICS */
994 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
995 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
996 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
997 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
998 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
999 Heps = _mm256_mul_pd(vfeps,H);
1000 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
1001 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
1002 velec = _mm256_mul_pd(qq13,VV);
1003 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
1004 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq13,FF),_mm256_mul_pd(vftabscale,rinv13)));
1006 /* Update potential sum for this i atom from the interaction with this j atom. */
1007 velec = _mm256_andnot_pd(dummy_mask,velec);
1008 velecsum = _mm256_add_pd(velecsum,velec);
1012 fscal = _mm256_andnot_pd(dummy_mask,fscal);
1014 /* Calculate temporary vectorial force */
1015 tx = _mm256_mul_pd(fscal,dx13);
1016 ty = _mm256_mul_pd(fscal,dy13);
1017 tz = _mm256_mul_pd(fscal,dz13);
1019 /* Update vectorial force */
1020 fix1 = _mm256_add_pd(fix1,tx);
1021 fiy1 = _mm256_add_pd(fiy1,ty);
1022 fiz1 = _mm256_add_pd(fiz1,tz);
1024 fjx3 = _mm256_add_pd(fjx3,tx);
1025 fjy3 = _mm256_add_pd(fjy3,ty);
1026 fjz3 = _mm256_add_pd(fjz3,tz);
1028 /**************************
1029 * CALCULATE INTERACTIONS *
1030 **************************/
1032 r21 = _mm256_mul_pd(rsq21,rinv21);
1033 r21 = _mm256_andnot_pd(dummy_mask,r21);
1035 /* Calculate table index by multiplying r with table scale and truncate to integer */
1036 rt = _mm256_mul_pd(r21,vftabscale);
1037 vfitab = _mm256_cvttpd_epi32(rt);
1038 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
1039 vfitab = _mm_slli_epi32(vfitab,2);
1041 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1042 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
1043 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
1044 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
1045 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
1046 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
1047 Heps = _mm256_mul_pd(vfeps,H);
1048 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
1049 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
1050 velec = _mm256_mul_pd(qq21,VV);
1051 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
1052 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq21,FF),_mm256_mul_pd(vftabscale,rinv21)));
1054 /* Update potential sum for this i atom from the interaction with this j atom. */
1055 velec = _mm256_andnot_pd(dummy_mask,velec);
1056 velecsum = _mm256_add_pd(velecsum,velec);
1060 fscal = _mm256_andnot_pd(dummy_mask,fscal);
1062 /* Calculate temporary vectorial force */
1063 tx = _mm256_mul_pd(fscal,dx21);
1064 ty = _mm256_mul_pd(fscal,dy21);
1065 tz = _mm256_mul_pd(fscal,dz21);
1067 /* Update vectorial force */
1068 fix2 = _mm256_add_pd(fix2,tx);
1069 fiy2 = _mm256_add_pd(fiy2,ty);
1070 fiz2 = _mm256_add_pd(fiz2,tz);
1072 fjx1 = _mm256_add_pd(fjx1,tx);
1073 fjy1 = _mm256_add_pd(fjy1,ty);
1074 fjz1 = _mm256_add_pd(fjz1,tz);
1076 /**************************
1077 * CALCULATE INTERACTIONS *
1078 **************************/
1080 r22 = _mm256_mul_pd(rsq22,rinv22);
1081 r22 = _mm256_andnot_pd(dummy_mask,r22);
1083 /* Calculate table index by multiplying r with table scale and truncate to integer */
1084 rt = _mm256_mul_pd(r22,vftabscale);
1085 vfitab = _mm256_cvttpd_epi32(rt);
1086 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
1087 vfitab = _mm_slli_epi32(vfitab,2);
1089 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1090 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
1091 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
1092 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
1093 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
1094 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
1095 Heps = _mm256_mul_pd(vfeps,H);
1096 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
1097 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
1098 velec = _mm256_mul_pd(qq22,VV);
1099 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
1100 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq22,FF),_mm256_mul_pd(vftabscale,rinv22)));
1102 /* Update potential sum for this i atom from the interaction with this j atom. */
1103 velec = _mm256_andnot_pd(dummy_mask,velec);
1104 velecsum = _mm256_add_pd(velecsum,velec);
1108 fscal = _mm256_andnot_pd(dummy_mask,fscal);
1110 /* Calculate temporary vectorial force */
1111 tx = _mm256_mul_pd(fscal,dx22);
1112 ty = _mm256_mul_pd(fscal,dy22);
1113 tz = _mm256_mul_pd(fscal,dz22);
1115 /* Update vectorial force */
1116 fix2 = _mm256_add_pd(fix2,tx);
1117 fiy2 = _mm256_add_pd(fiy2,ty);
1118 fiz2 = _mm256_add_pd(fiz2,tz);
1120 fjx2 = _mm256_add_pd(fjx2,tx);
1121 fjy2 = _mm256_add_pd(fjy2,ty);
1122 fjz2 = _mm256_add_pd(fjz2,tz);
1124 /**************************
1125 * CALCULATE INTERACTIONS *
1126 **************************/
1128 r23 = _mm256_mul_pd(rsq23,rinv23);
1129 r23 = _mm256_andnot_pd(dummy_mask,r23);
1131 /* Calculate table index by multiplying r with table scale and truncate to integer */
1132 rt = _mm256_mul_pd(r23,vftabscale);
1133 vfitab = _mm256_cvttpd_epi32(rt);
1134 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
1135 vfitab = _mm_slli_epi32(vfitab,2);
1137 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1138 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
1139 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
1140 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
1141 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
1142 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
1143 Heps = _mm256_mul_pd(vfeps,H);
1144 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
1145 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
1146 velec = _mm256_mul_pd(qq23,VV);
1147 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
1148 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq23,FF),_mm256_mul_pd(vftabscale,rinv23)));
1150 /* Update potential sum for this i atom from the interaction with this j atom. */
1151 velec = _mm256_andnot_pd(dummy_mask,velec);
1152 velecsum = _mm256_add_pd(velecsum,velec);
1156 fscal = _mm256_andnot_pd(dummy_mask,fscal);
1158 /* Calculate temporary vectorial force */
1159 tx = _mm256_mul_pd(fscal,dx23);
1160 ty = _mm256_mul_pd(fscal,dy23);
1161 tz = _mm256_mul_pd(fscal,dz23);
1163 /* Update vectorial force */
1164 fix2 = _mm256_add_pd(fix2,tx);
1165 fiy2 = _mm256_add_pd(fiy2,ty);
1166 fiz2 = _mm256_add_pd(fiz2,tz);
1168 fjx3 = _mm256_add_pd(fjx3,tx);
1169 fjy3 = _mm256_add_pd(fjy3,ty);
1170 fjz3 = _mm256_add_pd(fjz3,tz);
1172 /**************************
1173 * CALCULATE INTERACTIONS *
1174 **************************/
1176 r31 = _mm256_mul_pd(rsq31,rinv31);
1177 r31 = _mm256_andnot_pd(dummy_mask,r31);
1179 /* Calculate table index by multiplying r with table scale and truncate to integer */
1180 rt = _mm256_mul_pd(r31,vftabscale);
1181 vfitab = _mm256_cvttpd_epi32(rt);
1182 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
1183 vfitab = _mm_slli_epi32(vfitab,2);
1185 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1186 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
1187 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
1188 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
1189 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
1190 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
1191 Heps = _mm256_mul_pd(vfeps,H);
1192 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
1193 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
1194 velec = _mm256_mul_pd(qq31,VV);
1195 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
1196 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq31,FF),_mm256_mul_pd(vftabscale,rinv31)));
1198 /* Update potential sum for this i atom from the interaction with this j atom. */
1199 velec = _mm256_andnot_pd(dummy_mask,velec);
1200 velecsum = _mm256_add_pd(velecsum,velec);
1204 fscal = _mm256_andnot_pd(dummy_mask,fscal);
1206 /* Calculate temporary vectorial force */
1207 tx = _mm256_mul_pd(fscal,dx31);
1208 ty = _mm256_mul_pd(fscal,dy31);
1209 tz = _mm256_mul_pd(fscal,dz31);
1211 /* Update vectorial force */
1212 fix3 = _mm256_add_pd(fix3,tx);
1213 fiy3 = _mm256_add_pd(fiy3,ty);
1214 fiz3 = _mm256_add_pd(fiz3,tz);
1216 fjx1 = _mm256_add_pd(fjx1,tx);
1217 fjy1 = _mm256_add_pd(fjy1,ty);
1218 fjz1 = _mm256_add_pd(fjz1,tz);
1220 /**************************
1221 * CALCULATE INTERACTIONS *
1222 **************************/
1224 r32 = _mm256_mul_pd(rsq32,rinv32);
1225 r32 = _mm256_andnot_pd(dummy_mask,r32);
1227 /* Calculate table index by multiplying r with table scale and truncate to integer */
1228 rt = _mm256_mul_pd(r32,vftabscale);
1229 vfitab = _mm256_cvttpd_epi32(rt);
1230 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
1231 vfitab = _mm_slli_epi32(vfitab,2);
1233 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1234 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
1235 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
1236 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
1237 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
1238 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
1239 Heps = _mm256_mul_pd(vfeps,H);
1240 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
1241 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
1242 velec = _mm256_mul_pd(qq32,VV);
1243 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
1244 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq32,FF),_mm256_mul_pd(vftabscale,rinv32)));
1246 /* Update potential sum for this i atom from the interaction with this j atom. */
1247 velec = _mm256_andnot_pd(dummy_mask,velec);
1248 velecsum = _mm256_add_pd(velecsum,velec);
1252 fscal = _mm256_andnot_pd(dummy_mask,fscal);
1254 /* Calculate temporary vectorial force */
1255 tx = _mm256_mul_pd(fscal,dx32);
1256 ty = _mm256_mul_pd(fscal,dy32);
1257 tz = _mm256_mul_pd(fscal,dz32);
1259 /* Update vectorial force */
1260 fix3 = _mm256_add_pd(fix3,tx);
1261 fiy3 = _mm256_add_pd(fiy3,ty);
1262 fiz3 = _mm256_add_pd(fiz3,tz);
1264 fjx2 = _mm256_add_pd(fjx2,tx);
1265 fjy2 = _mm256_add_pd(fjy2,ty);
1266 fjz2 = _mm256_add_pd(fjz2,tz);
1268 /**************************
1269 * CALCULATE INTERACTIONS *
1270 **************************/
1272 r33 = _mm256_mul_pd(rsq33,rinv33);
1273 r33 = _mm256_andnot_pd(dummy_mask,r33);
1275 /* Calculate table index by multiplying r with table scale and truncate to integer */
1276 rt = _mm256_mul_pd(r33,vftabscale);
1277 vfitab = _mm256_cvttpd_epi32(rt);
1278 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
1279 vfitab = _mm_slli_epi32(vfitab,2);
1281 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1282 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
1283 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
1284 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
1285 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
1286 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
1287 Heps = _mm256_mul_pd(vfeps,H);
1288 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
1289 VV = _mm256_add_pd(Y,_mm256_mul_pd(vfeps,Fp));
1290 velec = _mm256_mul_pd(qq33,VV);
1291 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
1292 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq33,FF),_mm256_mul_pd(vftabscale,rinv33)));
1294 /* Update potential sum for this i atom from the interaction with this j atom. */
1295 velec = _mm256_andnot_pd(dummy_mask,velec);
1296 velecsum = _mm256_add_pd(velecsum,velec);
1300 fscal = _mm256_andnot_pd(dummy_mask,fscal);
1302 /* Calculate temporary vectorial force */
1303 tx = _mm256_mul_pd(fscal,dx33);
1304 ty = _mm256_mul_pd(fscal,dy33);
1305 tz = _mm256_mul_pd(fscal,dz33);
1307 /* Update vectorial force */
1308 fix3 = _mm256_add_pd(fix3,tx);
1309 fiy3 = _mm256_add_pd(fiy3,ty);
1310 fiz3 = _mm256_add_pd(fiz3,tz);
1312 fjx3 = _mm256_add_pd(fjx3,tx);
1313 fjy3 = _mm256_add_pd(fjy3,ty);
1314 fjz3 = _mm256_add_pd(fjz3,tz);
1316 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
1317 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
1318 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
1319 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
1321 gmx_mm256_decrement_4rvec_4ptr_swizzle_pd(fjptrA,fjptrB,fjptrC,fjptrD,
1322 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,
1323 fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
1325 /* Inner loop uses 431 flops */
1328 /* End of innermost loop */
1330 gmx_mm256_update_iforce_4atom_swizzle_pd(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
1331 f+i_coord_offset,fshift+i_shift_offset);
1334 /* Update potential energies */
1335 gmx_mm256_update_1pot_pd(velecsum,kernel_data->energygrp_elec+ggid);
1336 gmx_mm256_update_1pot_pd(vvdwsum,kernel_data->energygrp_vdw+ggid);
1338 /* Increment number of inner iterations */
1339 inneriter += j_index_end - j_index_start;
1341 /* Outer loop uses 26 flops */
1344 /* Increment number of outer iterations */
1347 /* Update outer/inner flops */
1349 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W4W4_VF,outeriter*26 + inneriter*431);
1352 * Gromacs nonbonded kernel: nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_F_avx_256_double
1353 * Electrostatics interaction: CubicSplineTable
1354 * VdW interaction: LennardJones
1355 * Geometry: Water4-Water4
1356 * Calculate force/pot: Force
1359 nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_F_avx_256_double
1360 (t_nblist * gmx_restrict nlist,
1361 rvec * gmx_restrict xx,
1362 rvec * gmx_restrict ff,
1363 t_forcerec * gmx_restrict fr,
1364 t_mdatoms * gmx_restrict mdatoms,
1365 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
1366 t_nrnb * gmx_restrict nrnb)
1368 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
1369 * just 0 for non-waters.
1370 * Suffixes A,B,C,D refer to j loop unrolling done with AVX, e.g. for the four different
1371 * jnr indices corresponding to data put in the four positions in the SIMD register.
1373 int i_shift_offset,i_coord_offset,outeriter,inneriter;
1374 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1375 int jnrA,jnrB,jnrC,jnrD;
1376 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
1377 int jnrlistE,jnrlistF,jnrlistG,jnrlistH;
1378 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
1379 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
1380 real rcutoff_scalar;
1381 real *shiftvec,*fshift,*x,*f;
1382 real *fjptrA,*fjptrB,*fjptrC,*fjptrD;
1383 real scratch[4*DIM];
1384 __m256d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
1385 real * vdwioffsetptr0;
1386 __m256d ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
1387 real * vdwioffsetptr1;
1388 __m256d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1389 real * vdwioffsetptr2;
1390 __m256d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1391 real * vdwioffsetptr3;
1392 __m256d ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
1393 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
1394 __m256d jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
1395 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
1396 __m256d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1397 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
1398 __m256d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1399 int vdwjidx3A,vdwjidx3B,vdwjidx3C,vdwjidx3D;
1400 __m256d jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
1401 __m256d dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
1402 __m256d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1403 __m256d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1404 __m256d dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
1405 __m256d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1406 __m256d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1407 __m256d dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
1408 __m256d dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
1409 __m256d dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
1410 __m256d dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
1411 __m256d velec,felec,velecsum,facel,crf,krf,krf2;
1414 __m256d rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
1417 __m256d one_sixth = _mm256_set1_pd(1.0/6.0);
1418 __m256d one_twelfth = _mm256_set1_pd(1.0/12.0);
1420 __m128i ifour = _mm_set1_epi32(4);
1421 __m256d rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
1423 __m256d dummy_mask,cutoff_mask;
1424 __m128 tmpmask0,tmpmask1;
1425 __m256d signbit = _mm256_castsi256_pd( _mm256_set1_epi32(0x80000000) );
1426 __m256d one = _mm256_set1_pd(1.0);
1427 __m256d two = _mm256_set1_pd(2.0);
1433 jindex = nlist->jindex;
1435 shiftidx = nlist->shift;
1437 shiftvec = fr->shift_vec[0];
1438 fshift = fr->fshift[0];
1439 facel = _mm256_set1_pd(fr->epsfac);
1440 charge = mdatoms->chargeA;
1441 nvdwtype = fr->ntype;
1442 vdwparam = fr->nbfp;
1443 vdwtype = mdatoms->typeA;
1445 vftab = kernel_data->table_elec->data;
1446 vftabscale = _mm256_set1_pd(kernel_data->table_elec->scale);
1448 /* Setup water-specific parameters */
1449 inr = nlist->iinr[0];
1450 iq1 = _mm256_mul_pd(facel,_mm256_set1_pd(charge[inr+1]));
1451 iq2 = _mm256_mul_pd(facel,_mm256_set1_pd(charge[inr+2]));
1452 iq3 = _mm256_mul_pd(facel,_mm256_set1_pd(charge[inr+3]));
1453 vdwioffsetptr0 = vdwparam+2*nvdwtype*vdwtype[inr+0];
1455 jq1 = _mm256_set1_pd(charge[inr+1]);
1456 jq2 = _mm256_set1_pd(charge[inr+2]);
1457 jq3 = _mm256_set1_pd(charge[inr+3]);
1458 vdwjidx0A = 2*vdwtype[inr+0];
1459 c6_00 = _mm256_set1_pd(vdwioffsetptr0[vdwjidx0A]);
1460 c12_00 = _mm256_set1_pd(vdwioffsetptr0[vdwjidx0A+1]);
1461 qq11 = _mm256_mul_pd(iq1,jq1);
1462 qq12 = _mm256_mul_pd(iq1,jq2);
1463 qq13 = _mm256_mul_pd(iq1,jq3);
1464 qq21 = _mm256_mul_pd(iq2,jq1);
1465 qq22 = _mm256_mul_pd(iq2,jq2);
1466 qq23 = _mm256_mul_pd(iq2,jq3);
1467 qq31 = _mm256_mul_pd(iq3,jq1);
1468 qq32 = _mm256_mul_pd(iq3,jq2);
1469 qq33 = _mm256_mul_pd(iq3,jq3);
1471 /* Avoid stupid compiler warnings */
1472 jnrA = jnrB = jnrC = jnrD = 0;
1473 j_coord_offsetA = 0;
1474 j_coord_offsetB = 0;
1475 j_coord_offsetC = 0;
1476 j_coord_offsetD = 0;
1481 for(iidx=0;iidx<4*DIM;iidx++)
1483 scratch[iidx] = 0.0;
1486 /* Start outer loop over neighborlists */
1487 for(iidx=0; iidx<nri; iidx++)
1489 /* Load shift vector for this list */
1490 i_shift_offset = DIM*shiftidx[iidx];
1492 /* Load limits for loop over neighbors */
1493 j_index_start = jindex[iidx];
1494 j_index_end = jindex[iidx+1];
1496 /* Get outer coordinate index */
1498 i_coord_offset = DIM*inr;
1500 /* Load i particle coords and add shift vector */
1501 gmx_mm256_load_shift_and_4rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset,
1502 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
1504 fix0 = _mm256_setzero_pd();
1505 fiy0 = _mm256_setzero_pd();
1506 fiz0 = _mm256_setzero_pd();
1507 fix1 = _mm256_setzero_pd();
1508 fiy1 = _mm256_setzero_pd();
1509 fiz1 = _mm256_setzero_pd();
1510 fix2 = _mm256_setzero_pd();
1511 fiy2 = _mm256_setzero_pd();
1512 fiz2 = _mm256_setzero_pd();
1513 fix3 = _mm256_setzero_pd();
1514 fiy3 = _mm256_setzero_pd();
1515 fiz3 = _mm256_setzero_pd();
1517 /* Start inner kernel loop */
1518 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
1521 /* Get j neighbor index, and coordinate index */
1523 jnrB = jjnr[jidx+1];
1524 jnrC = jjnr[jidx+2];
1525 jnrD = jjnr[jidx+3];
1526 j_coord_offsetA = DIM*jnrA;
1527 j_coord_offsetB = DIM*jnrB;
1528 j_coord_offsetC = DIM*jnrC;
1529 j_coord_offsetD = DIM*jnrD;
1531 /* load j atom coordinates */
1532 gmx_mm256_load_4rvec_4ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
1533 x+j_coord_offsetC,x+j_coord_offsetD,
1534 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,
1535 &jy2,&jz2,&jx3,&jy3,&jz3);
1537 /* Calculate displacement vector */
1538 dx00 = _mm256_sub_pd(ix0,jx0);
1539 dy00 = _mm256_sub_pd(iy0,jy0);
1540 dz00 = _mm256_sub_pd(iz0,jz0);
1541 dx11 = _mm256_sub_pd(ix1,jx1);
1542 dy11 = _mm256_sub_pd(iy1,jy1);
1543 dz11 = _mm256_sub_pd(iz1,jz1);
1544 dx12 = _mm256_sub_pd(ix1,jx2);
1545 dy12 = _mm256_sub_pd(iy1,jy2);
1546 dz12 = _mm256_sub_pd(iz1,jz2);
1547 dx13 = _mm256_sub_pd(ix1,jx3);
1548 dy13 = _mm256_sub_pd(iy1,jy3);
1549 dz13 = _mm256_sub_pd(iz1,jz3);
1550 dx21 = _mm256_sub_pd(ix2,jx1);
1551 dy21 = _mm256_sub_pd(iy2,jy1);
1552 dz21 = _mm256_sub_pd(iz2,jz1);
1553 dx22 = _mm256_sub_pd(ix2,jx2);
1554 dy22 = _mm256_sub_pd(iy2,jy2);
1555 dz22 = _mm256_sub_pd(iz2,jz2);
1556 dx23 = _mm256_sub_pd(ix2,jx3);
1557 dy23 = _mm256_sub_pd(iy2,jy3);
1558 dz23 = _mm256_sub_pd(iz2,jz3);
1559 dx31 = _mm256_sub_pd(ix3,jx1);
1560 dy31 = _mm256_sub_pd(iy3,jy1);
1561 dz31 = _mm256_sub_pd(iz3,jz1);
1562 dx32 = _mm256_sub_pd(ix3,jx2);
1563 dy32 = _mm256_sub_pd(iy3,jy2);
1564 dz32 = _mm256_sub_pd(iz3,jz2);
1565 dx33 = _mm256_sub_pd(ix3,jx3);
1566 dy33 = _mm256_sub_pd(iy3,jy3);
1567 dz33 = _mm256_sub_pd(iz3,jz3);
1569 /* Calculate squared distance and things based on it */
1570 rsq00 = gmx_mm256_calc_rsq_pd(dx00,dy00,dz00);
1571 rsq11 = gmx_mm256_calc_rsq_pd(dx11,dy11,dz11);
1572 rsq12 = gmx_mm256_calc_rsq_pd(dx12,dy12,dz12);
1573 rsq13 = gmx_mm256_calc_rsq_pd(dx13,dy13,dz13);
1574 rsq21 = gmx_mm256_calc_rsq_pd(dx21,dy21,dz21);
1575 rsq22 = gmx_mm256_calc_rsq_pd(dx22,dy22,dz22);
1576 rsq23 = gmx_mm256_calc_rsq_pd(dx23,dy23,dz23);
1577 rsq31 = gmx_mm256_calc_rsq_pd(dx31,dy31,dz31);
1578 rsq32 = gmx_mm256_calc_rsq_pd(dx32,dy32,dz32);
1579 rsq33 = gmx_mm256_calc_rsq_pd(dx33,dy33,dz33);
1581 rinv11 = gmx_mm256_invsqrt_pd(rsq11);
1582 rinv12 = gmx_mm256_invsqrt_pd(rsq12);
1583 rinv13 = gmx_mm256_invsqrt_pd(rsq13);
1584 rinv21 = gmx_mm256_invsqrt_pd(rsq21);
1585 rinv22 = gmx_mm256_invsqrt_pd(rsq22);
1586 rinv23 = gmx_mm256_invsqrt_pd(rsq23);
1587 rinv31 = gmx_mm256_invsqrt_pd(rsq31);
1588 rinv32 = gmx_mm256_invsqrt_pd(rsq32);
1589 rinv33 = gmx_mm256_invsqrt_pd(rsq33);
1591 rinvsq00 = gmx_mm256_inv_pd(rsq00);
1593 fjx0 = _mm256_setzero_pd();
1594 fjy0 = _mm256_setzero_pd();
1595 fjz0 = _mm256_setzero_pd();
1596 fjx1 = _mm256_setzero_pd();
1597 fjy1 = _mm256_setzero_pd();
1598 fjz1 = _mm256_setzero_pd();
1599 fjx2 = _mm256_setzero_pd();
1600 fjy2 = _mm256_setzero_pd();
1601 fjz2 = _mm256_setzero_pd();
1602 fjx3 = _mm256_setzero_pd();
1603 fjy3 = _mm256_setzero_pd();
1604 fjz3 = _mm256_setzero_pd();
1606 /**************************
1607 * CALCULATE INTERACTIONS *
1608 **************************/
1610 /* LENNARD-JONES DISPERSION/REPULSION */
1612 rinvsix = _mm256_mul_pd(_mm256_mul_pd(rinvsq00,rinvsq00),rinvsq00);
1613 fvdw = _mm256_mul_pd(_mm256_sub_pd(_mm256_mul_pd(c12_00,rinvsix),c6_00),_mm256_mul_pd(rinvsix,rinvsq00));
1617 /* Calculate temporary vectorial force */
1618 tx = _mm256_mul_pd(fscal,dx00);
1619 ty = _mm256_mul_pd(fscal,dy00);
1620 tz = _mm256_mul_pd(fscal,dz00);
1622 /* Update vectorial force */
1623 fix0 = _mm256_add_pd(fix0,tx);
1624 fiy0 = _mm256_add_pd(fiy0,ty);
1625 fiz0 = _mm256_add_pd(fiz0,tz);
1627 fjx0 = _mm256_add_pd(fjx0,tx);
1628 fjy0 = _mm256_add_pd(fjy0,ty);
1629 fjz0 = _mm256_add_pd(fjz0,tz);
1631 /**************************
1632 * CALCULATE INTERACTIONS *
1633 **************************/
1635 r11 = _mm256_mul_pd(rsq11,rinv11);
1637 /* Calculate table index by multiplying r with table scale and truncate to integer */
1638 rt = _mm256_mul_pd(r11,vftabscale);
1639 vfitab = _mm256_cvttpd_epi32(rt);
1640 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
1641 vfitab = _mm_slli_epi32(vfitab,2);
1643 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1644 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
1645 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
1646 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
1647 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
1648 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
1649 Heps = _mm256_mul_pd(vfeps,H);
1650 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
1651 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
1652 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq11,FF),_mm256_mul_pd(vftabscale,rinv11)));
1656 /* Calculate temporary vectorial force */
1657 tx = _mm256_mul_pd(fscal,dx11);
1658 ty = _mm256_mul_pd(fscal,dy11);
1659 tz = _mm256_mul_pd(fscal,dz11);
1661 /* Update vectorial force */
1662 fix1 = _mm256_add_pd(fix1,tx);
1663 fiy1 = _mm256_add_pd(fiy1,ty);
1664 fiz1 = _mm256_add_pd(fiz1,tz);
1666 fjx1 = _mm256_add_pd(fjx1,tx);
1667 fjy1 = _mm256_add_pd(fjy1,ty);
1668 fjz1 = _mm256_add_pd(fjz1,tz);
1670 /**************************
1671 * CALCULATE INTERACTIONS *
1672 **************************/
1674 r12 = _mm256_mul_pd(rsq12,rinv12);
1676 /* Calculate table index by multiplying r with table scale and truncate to integer */
1677 rt = _mm256_mul_pd(r12,vftabscale);
1678 vfitab = _mm256_cvttpd_epi32(rt);
1679 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
1680 vfitab = _mm_slli_epi32(vfitab,2);
1682 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1683 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
1684 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
1685 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
1686 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
1687 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
1688 Heps = _mm256_mul_pd(vfeps,H);
1689 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
1690 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
1691 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq12,FF),_mm256_mul_pd(vftabscale,rinv12)));
1695 /* Calculate temporary vectorial force */
1696 tx = _mm256_mul_pd(fscal,dx12);
1697 ty = _mm256_mul_pd(fscal,dy12);
1698 tz = _mm256_mul_pd(fscal,dz12);
1700 /* Update vectorial force */
1701 fix1 = _mm256_add_pd(fix1,tx);
1702 fiy1 = _mm256_add_pd(fiy1,ty);
1703 fiz1 = _mm256_add_pd(fiz1,tz);
1705 fjx2 = _mm256_add_pd(fjx2,tx);
1706 fjy2 = _mm256_add_pd(fjy2,ty);
1707 fjz2 = _mm256_add_pd(fjz2,tz);
1709 /**************************
1710 * CALCULATE INTERACTIONS *
1711 **************************/
1713 r13 = _mm256_mul_pd(rsq13,rinv13);
1715 /* Calculate table index by multiplying r with table scale and truncate to integer */
1716 rt = _mm256_mul_pd(r13,vftabscale);
1717 vfitab = _mm256_cvttpd_epi32(rt);
1718 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
1719 vfitab = _mm_slli_epi32(vfitab,2);
1721 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1722 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
1723 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
1724 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
1725 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
1726 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
1727 Heps = _mm256_mul_pd(vfeps,H);
1728 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
1729 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
1730 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq13,FF),_mm256_mul_pd(vftabscale,rinv13)));
1734 /* Calculate temporary vectorial force */
1735 tx = _mm256_mul_pd(fscal,dx13);
1736 ty = _mm256_mul_pd(fscal,dy13);
1737 tz = _mm256_mul_pd(fscal,dz13);
1739 /* Update vectorial force */
1740 fix1 = _mm256_add_pd(fix1,tx);
1741 fiy1 = _mm256_add_pd(fiy1,ty);
1742 fiz1 = _mm256_add_pd(fiz1,tz);
1744 fjx3 = _mm256_add_pd(fjx3,tx);
1745 fjy3 = _mm256_add_pd(fjy3,ty);
1746 fjz3 = _mm256_add_pd(fjz3,tz);
1748 /**************************
1749 * CALCULATE INTERACTIONS *
1750 **************************/
1752 r21 = _mm256_mul_pd(rsq21,rinv21);
1754 /* Calculate table index by multiplying r with table scale and truncate to integer */
1755 rt = _mm256_mul_pd(r21,vftabscale);
1756 vfitab = _mm256_cvttpd_epi32(rt);
1757 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
1758 vfitab = _mm_slli_epi32(vfitab,2);
1760 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1761 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
1762 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
1763 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
1764 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
1765 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
1766 Heps = _mm256_mul_pd(vfeps,H);
1767 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
1768 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
1769 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq21,FF),_mm256_mul_pd(vftabscale,rinv21)));
1773 /* Calculate temporary vectorial force */
1774 tx = _mm256_mul_pd(fscal,dx21);
1775 ty = _mm256_mul_pd(fscal,dy21);
1776 tz = _mm256_mul_pd(fscal,dz21);
1778 /* Update vectorial force */
1779 fix2 = _mm256_add_pd(fix2,tx);
1780 fiy2 = _mm256_add_pd(fiy2,ty);
1781 fiz2 = _mm256_add_pd(fiz2,tz);
1783 fjx1 = _mm256_add_pd(fjx1,tx);
1784 fjy1 = _mm256_add_pd(fjy1,ty);
1785 fjz1 = _mm256_add_pd(fjz1,tz);
1787 /**************************
1788 * CALCULATE INTERACTIONS *
1789 **************************/
1791 r22 = _mm256_mul_pd(rsq22,rinv22);
1793 /* Calculate table index by multiplying r with table scale and truncate to integer */
1794 rt = _mm256_mul_pd(r22,vftabscale);
1795 vfitab = _mm256_cvttpd_epi32(rt);
1796 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
1797 vfitab = _mm_slli_epi32(vfitab,2);
1799 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1800 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
1801 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
1802 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
1803 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
1804 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
1805 Heps = _mm256_mul_pd(vfeps,H);
1806 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
1807 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
1808 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq22,FF),_mm256_mul_pd(vftabscale,rinv22)));
1812 /* Calculate temporary vectorial force */
1813 tx = _mm256_mul_pd(fscal,dx22);
1814 ty = _mm256_mul_pd(fscal,dy22);
1815 tz = _mm256_mul_pd(fscal,dz22);
1817 /* Update vectorial force */
1818 fix2 = _mm256_add_pd(fix2,tx);
1819 fiy2 = _mm256_add_pd(fiy2,ty);
1820 fiz2 = _mm256_add_pd(fiz2,tz);
1822 fjx2 = _mm256_add_pd(fjx2,tx);
1823 fjy2 = _mm256_add_pd(fjy2,ty);
1824 fjz2 = _mm256_add_pd(fjz2,tz);
1826 /**************************
1827 * CALCULATE INTERACTIONS *
1828 **************************/
1830 r23 = _mm256_mul_pd(rsq23,rinv23);
1832 /* Calculate table index by multiplying r with table scale and truncate to integer */
1833 rt = _mm256_mul_pd(r23,vftabscale);
1834 vfitab = _mm256_cvttpd_epi32(rt);
1835 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
1836 vfitab = _mm_slli_epi32(vfitab,2);
1838 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1839 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
1840 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
1841 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
1842 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
1843 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
1844 Heps = _mm256_mul_pd(vfeps,H);
1845 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
1846 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
1847 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq23,FF),_mm256_mul_pd(vftabscale,rinv23)));
1851 /* Calculate temporary vectorial force */
1852 tx = _mm256_mul_pd(fscal,dx23);
1853 ty = _mm256_mul_pd(fscal,dy23);
1854 tz = _mm256_mul_pd(fscal,dz23);
1856 /* Update vectorial force */
1857 fix2 = _mm256_add_pd(fix2,tx);
1858 fiy2 = _mm256_add_pd(fiy2,ty);
1859 fiz2 = _mm256_add_pd(fiz2,tz);
1861 fjx3 = _mm256_add_pd(fjx3,tx);
1862 fjy3 = _mm256_add_pd(fjy3,ty);
1863 fjz3 = _mm256_add_pd(fjz3,tz);
1865 /**************************
1866 * CALCULATE INTERACTIONS *
1867 **************************/
1869 r31 = _mm256_mul_pd(rsq31,rinv31);
1871 /* Calculate table index by multiplying r with table scale and truncate to integer */
1872 rt = _mm256_mul_pd(r31,vftabscale);
1873 vfitab = _mm256_cvttpd_epi32(rt);
1874 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
1875 vfitab = _mm_slli_epi32(vfitab,2);
1877 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1878 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
1879 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
1880 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
1881 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
1882 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
1883 Heps = _mm256_mul_pd(vfeps,H);
1884 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
1885 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
1886 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq31,FF),_mm256_mul_pd(vftabscale,rinv31)));
1890 /* Calculate temporary vectorial force */
1891 tx = _mm256_mul_pd(fscal,dx31);
1892 ty = _mm256_mul_pd(fscal,dy31);
1893 tz = _mm256_mul_pd(fscal,dz31);
1895 /* Update vectorial force */
1896 fix3 = _mm256_add_pd(fix3,tx);
1897 fiy3 = _mm256_add_pd(fiy3,ty);
1898 fiz3 = _mm256_add_pd(fiz3,tz);
1900 fjx1 = _mm256_add_pd(fjx1,tx);
1901 fjy1 = _mm256_add_pd(fjy1,ty);
1902 fjz1 = _mm256_add_pd(fjz1,tz);
1904 /**************************
1905 * CALCULATE INTERACTIONS *
1906 **************************/
1908 r32 = _mm256_mul_pd(rsq32,rinv32);
1910 /* Calculate table index by multiplying r with table scale and truncate to integer */
1911 rt = _mm256_mul_pd(r32,vftabscale);
1912 vfitab = _mm256_cvttpd_epi32(rt);
1913 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
1914 vfitab = _mm_slli_epi32(vfitab,2);
1916 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1917 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
1918 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
1919 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
1920 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
1921 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
1922 Heps = _mm256_mul_pd(vfeps,H);
1923 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
1924 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
1925 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq32,FF),_mm256_mul_pd(vftabscale,rinv32)));
1929 /* Calculate temporary vectorial force */
1930 tx = _mm256_mul_pd(fscal,dx32);
1931 ty = _mm256_mul_pd(fscal,dy32);
1932 tz = _mm256_mul_pd(fscal,dz32);
1934 /* Update vectorial force */
1935 fix3 = _mm256_add_pd(fix3,tx);
1936 fiy3 = _mm256_add_pd(fiy3,ty);
1937 fiz3 = _mm256_add_pd(fiz3,tz);
1939 fjx2 = _mm256_add_pd(fjx2,tx);
1940 fjy2 = _mm256_add_pd(fjy2,ty);
1941 fjz2 = _mm256_add_pd(fjz2,tz);
1943 /**************************
1944 * CALCULATE INTERACTIONS *
1945 **************************/
1947 r33 = _mm256_mul_pd(rsq33,rinv33);
1949 /* Calculate table index by multiplying r with table scale and truncate to integer */
1950 rt = _mm256_mul_pd(r33,vftabscale);
1951 vfitab = _mm256_cvttpd_epi32(rt);
1952 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
1953 vfitab = _mm_slli_epi32(vfitab,2);
1955 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1956 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
1957 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
1958 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
1959 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
1960 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
1961 Heps = _mm256_mul_pd(vfeps,H);
1962 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
1963 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
1964 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq33,FF),_mm256_mul_pd(vftabscale,rinv33)));
1968 /* Calculate temporary vectorial force */
1969 tx = _mm256_mul_pd(fscal,dx33);
1970 ty = _mm256_mul_pd(fscal,dy33);
1971 tz = _mm256_mul_pd(fscal,dz33);
1973 /* Update vectorial force */
1974 fix3 = _mm256_add_pd(fix3,tx);
1975 fiy3 = _mm256_add_pd(fiy3,ty);
1976 fiz3 = _mm256_add_pd(fiz3,tz);
1978 fjx3 = _mm256_add_pd(fjx3,tx);
1979 fjy3 = _mm256_add_pd(fjy3,ty);
1980 fjz3 = _mm256_add_pd(fjz3,tz);
1982 fjptrA = f+j_coord_offsetA;
1983 fjptrB = f+j_coord_offsetB;
1984 fjptrC = f+j_coord_offsetC;
1985 fjptrD = f+j_coord_offsetD;
1987 gmx_mm256_decrement_4rvec_4ptr_swizzle_pd(fjptrA,fjptrB,fjptrC,fjptrD,
1988 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,
1989 fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
1991 /* Inner loop uses 381 flops */
1994 if(jidx<j_index_end)
1997 /* Get j neighbor index, and coordinate index */
1998 jnrlistA = jjnr[jidx];
1999 jnrlistB = jjnr[jidx+1];
2000 jnrlistC = jjnr[jidx+2];
2001 jnrlistD = jjnr[jidx+3];
2002 /* Sign of each element will be negative for non-real atoms.
2003 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
2004 * so use it as val = _mm_andnot_pd(mask,val) to clear dummy entries.
2006 tmpmask0 = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
2008 tmpmask1 = _mm_permute_ps(tmpmask0,_GMX_MM_PERMUTE(3,3,2,2));
2009 tmpmask0 = _mm_permute_ps(tmpmask0,_GMX_MM_PERMUTE(1,1,0,0));
2010 dummy_mask = _mm256_castps_pd(gmx_mm256_set_m128(tmpmask1,tmpmask0));
2012 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
2013 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
2014 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
2015 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
2016 j_coord_offsetA = DIM*jnrA;
2017 j_coord_offsetB = DIM*jnrB;
2018 j_coord_offsetC = DIM*jnrC;
2019 j_coord_offsetD = DIM*jnrD;
2021 /* load j atom coordinates */
2022 gmx_mm256_load_4rvec_4ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
2023 x+j_coord_offsetC,x+j_coord_offsetD,
2024 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,
2025 &jy2,&jz2,&jx3,&jy3,&jz3);
2027 /* Calculate displacement vector */
2028 dx00 = _mm256_sub_pd(ix0,jx0);
2029 dy00 = _mm256_sub_pd(iy0,jy0);
2030 dz00 = _mm256_sub_pd(iz0,jz0);
2031 dx11 = _mm256_sub_pd(ix1,jx1);
2032 dy11 = _mm256_sub_pd(iy1,jy1);
2033 dz11 = _mm256_sub_pd(iz1,jz1);
2034 dx12 = _mm256_sub_pd(ix1,jx2);
2035 dy12 = _mm256_sub_pd(iy1,jy2);
2036 dz12 = _mm256_sub_pd(iz1,jz2);
2037 dx13 = _mm256_sub_pd(ix1,jx3);
2038 dy13 = _mm256_sub_pd(iy1,jy3);
2039 dz13 = _mm256_sub_pd(iz1,jz3);
2040 dx21 = _mm256_sub_pd(ix2,jx1);
2041 dy21 = _mm256_sub_pd(iy2,jy1);
2042 dz21 = _mm256_sub_pd(iz2,jz1);
2043 dx22 = _mm256_sub_pd(ix2,jx2);
2044 dy22 = _mm256_sub_pd(iy2,jy2);
2045 dz22 = _mm256_sub_pd(iz2,jz2);
2046 dx23 = _mm256_sub_pd(ix2,jx3);
2047 dy23 = _mm256_sub_pd(iy2,jy3);
2048 dz23 = _mm256_sub_pd(iz2,jz3);
2049 dx31 = _mm256_sub_pd(ix3,jx1);
2050 dy31 = _mm256_sub_pd(iy3,jy1);
2051 dz31 = _mm256_sub_pd(iz3,jz1);
2052 dx32 = _mm256_sub_pd(ix3,jx2);
2053 dy32 = _mm256_sub_pd(iy3,jy2);
2054 dz32 = _mm256_sub_pd(iz3,jz2);
2055 dx33 = _mm256_sub_pd(ix3,jx3);
2056 dy33 = _mm256_sub_pd(iy3,jy3);
2057 dz33 = _mm256_sub_pd(iz3,jz3);
2059 /* Calculate squared distance and things based on it */
2060 rsq00 = gmx_mm256_calc_rsq_pd(dx00,dy00,dz00);
2061 rsq11 = gmx_mm256_calc_rsq_pd(dx11,dy11,dz11);
2062 rsq12 = gmx_mm256_calc_rsq_pd(dx12,dy12,dz12);
2063 rsq13 = gmx_mm256_calc_rsq_pd(dx13,dy13,dz13);
2064 rsq21 = gmx_mm256_calc_rsq_pd(dx21,dy21,dz21);
2065 rsq22 = gmx_mm256_calc_rsq_pd(dx22,dy22,dz22);
2066 rsq23 = gmx_mm256_calc_rsq_pd(dx23,dy23,dz23);
2067 rsq31 = gmx_mm256_calc_rsq_pd(dx31,dy31,dz31);
2068 rsq32 = gmx_mm256_calc_rsq_pd(dx32,dy32,dz32);
2069 rsq33 = gmx_mm256_calc_rsq_pd(dx33,dy33,dz33);
2071 rinv11 = gmx_mm256_invsqrt_pd(rsq11);
2072 rinv12 = gmx_mm256_invsqrt_pd(rsq12);
2073 rinv13 = gmx_mm256_invsqrt_pd(rsq13);
2074 rinv21 = gmx_mm256_invsqrt_pd(rsq21);
2075 rinv22 = gmx_mm256_invsqrt_pd(rsq22);
2076 rinv23 = gmx_mm256_invsqrt_pd(rsq23);
2077 rinv31 = gmx_mm256_invsqrt_pd(rsq31);
2078 rinv32 = gmx_mm256_invsqrt_pd(rsq32);
2079 rinv33 = gmx_mm256_invsqrt_pd(rsq33);
2081 rinvsq00 = gmx_mm256_inv_pd(rsq00);
2083 fjx0 = _mm256_setzero_pd();
2084 fjy0 = _mm256_setzero_pd();
2085 fjz0 = _mm256_setzero_pd();
2086 fjx1 = _mm256_setzero_pd();
2087 fjy1 = _mm256_setzero_pd();
2088 fjz1 = _mm256_setzero_pd();
2089 fjx2 = _mm256_setzero_pd();
2090 fjy2 = _mm256_setzero_pd();
2091 fjz2 = _mm256_setzero_pd();
2092 fjx3 = _mm256_setzero_pd();
2093 fjy3 = _mm256_setzero_pd();
2094 fjz3 = _mm256_setzero_pd();
2096 /**************************
2097 * CALCULATE INTERACTIONS *
2098 **************************/
2100 /* LENNARD-JONES DISPERSION/REPULSION */
2102 rinvsix = _mm256_mul_pd(_mm256_mul_pd(rinvsq00,rinvsq00),rinvsq00);
2103 fvdw = _mm256_mul_pd(_mm256_sub_pd(_mm256_mul_pd(c12_00,rinvsix),c6_00),_mm256_mul_pd(rinvsix,rinvsq00));
2107 fscal = _mm256_andnot_pd(dummy_mask,fscal);
2109 /* Calculate temporary vectorial force */
2110 tx = _mm256_mul_pd(fscal,dx00);
2111 ty = _mm256_mul_pd(fscal,dy00);
2112 tz = _mm256_mul_pd(fscal,dz00);
2114 /* Update vectorial force */
2115 fix0 = _mm256_add_pd(fix0,tx);
2116 fiy0 = _mm256_add_pd(fiy0,ty);
2117 fiz0 = _mm256_add_pd(fiz0,tz);
2119 fjx0 = _mm256_add_pd(fjx0,tx);
2120 fjy0 = _mm256_add_pd(fjy0,ty);
2121 fjz0 = _mm256_add_pd(fjz0,tz);
2123 /**************************
2124 * CALCULATE INTERACTIONS *
2125 **************************/
2127 r11 = _mm256_mul_pd(rsq11,rinv11);
2128 r11 = _mm256_andnot_pd(dummy_mask,r11);
2130 /* Calculate table index by multiplying r with table scale and truncate to integer */
2131 rt = _mm256_mul_pd(r11,vftabscale);
2132 vfitab = _mm256_cvttpd_epi32(rt);
2133 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
2134 vfitab = _mm_slli_epi32(vfitab,2);
2136 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2137 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
2138 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
2139 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
2140 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
2141 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
2142 Heps = _mm256_mul_pd(vfeps,H);
2143 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
2144 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
2145 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq11,FF),_mm256_mul_pd(vftabscale,rinv11)));
2149 fscal = _mm256_andnot_pd(dummy_mask,fscal);
2151 /* Calculate temporary vectorial force */
2152 tx = _mm256_mul_pd(fscal,dx11);
2153 ty = _mm256_mul_pd(fscal,dy11);
2154 tz = _mm256_mul_pd(fscal,dz11);
2156 /* Update vectorial force */
2157 fix1 = _mm256_add_pd(fix1,tx);
2158 fiy1 = _mm256_add_pd(fiy1,ty);
2159 fiz1 = _mm256_add_pd(fiz1,tz);
2161 fjx1 = _mm256_add_pd(fjx1,tx);
2162 fjy1 = _mm256_add_pd(fjy1,ty);
2163 fjz1 = _mm256_add_pd(fjz1,tz);
2165 /**************************
2166 * CALCULATE INTERACTIONS *
2167 **************************/
2169 r12 = _mm256_mul_pd(rsq12,rinv12);
2170 r12 = _mm256_andnot_pd(dummy_mask,r12);
2172 /* Calculate table index by multiplying r with table scale and truncate to integer */
2173 rt = _mm256_mul_pd(r12,vftabscale);
2174 vfitab = _mm256_cvttpd_epi32(rt);
2175 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
2176 vfitab = _mm_slli_epi32(vfitab,2);
2178 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2179 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
2180 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
2181 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
2182 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
2183 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
2184 Heps = _mm256_mul_pd(vfeps,H);
2185 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
2186 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
2187 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq12,FF),_mm256_mul_pd(vftabscale,rinv12)));
2191 fscal = _mm256_andnot_pd(dummy_mask,fscal);
2193 /* Calculate temporary vectorial force */
2194 tx = _mm256_mul_pd(fscal,dx12);
2195 ty = _mm256_mul_pd(fscal,dy12);
2196 tz = _mm256_mul_pd(fscal,dz12);
2198 /* Update vectorial force */
2199 fix1 = _mm256_add_pd(fix1,tx);
2200 fiy1 = _mm256_add_pd(fiy1,ty);
2201 fiz1 = _mm256_add_pd(fiz1,tz);
2203 fjx2 = _mm256_add_pd(fjx2,tx);
2204 fjy2 = _mm256_add_pd(fjy2,ty);
2205 fjz2 = _mm256_add_pd(fjz2,tz);
2207 /**************************
2208 * CALCULATE INTERACTIONS *
2209 **************************/
2211 r13 = _mm256_mul_pd(rsq13,rinv13);
2212 r13 = _mm256_andnot_pd(dummy_mask,r13);
2214 /* Calculate table index by multiplying r with table scale and truncate to integer */
2215 rt = _mm256_mul_pd(r13,vftabscale);
2216 vfitab = _mm256_cvttpd_epi32(rt);
2217 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
2218 vfitab = _mm_slli_epi32(vfitab,2);
2220 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2221 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
2222 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
2223 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
2224 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
2225 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
2226 Heps = _mm256_mul_pd(vfeps,H);
2227 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
2228 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
2229 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq13,FF),_mm256_mul_pd(vftabscale,rinv13)));
2233 fscal = _mm256_andnot_pd(dummy_mask,fscal);
2235 /* Calculate temporary vectorial force */
2236 tx = _mm256_mul_pd(fscal,dx13);
2237 ty = _mm256_mul_pd(fscal,dy13);
2238 tz = _mm256_mul_pd(fscal,dz13);
2240 /* Update vectorial force */
2241 fix1 = _mm256_add_pd(fix1,tx);
2242 fiy1 = _mm256_add_pd(fiy1,ty);
2243 fiz1 = _mm256_add_pd(fiz1,tz);
2245 fjx3 = _mm256_add_pd(fjx3,tx);
2246 fjy3 = _mm256_add_pd(fjy3,ty);
2247 fjz3 = _mm256_add_pd(fjz3,tz);
2249 /**************************
2250 * CALCULATE INTERACTIONS *
2251 **************************/
2253 r21 = _mm256_mul_pd(rsq21,rinv21);
2254 r21 = _mm256_andnot_pd(dummy_mask,r21);
2256 /* Calculate table index by multiplying r with table scale and truncate to integer */
2257 rt = _mm256_mul_pd(r21,vftabscale);
2258 vfitab = _mm256_cvttpd_epi32(rt);
2259 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
2260 vfitab = _mm_slli_epi32(vfitab,2);
2262 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2263 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
2264 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
2265 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
2266 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
2267 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
2268 Heps = _mm256_mul_pd(vfeps,H);
2269 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
2270 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
2271 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq21,FF),_mm256_mul_pd(vftabscale,rinv21)));
2275 fscal = _mm256_andnot_pd(dummy_mask,fscal);
2277 /* Calculate temporary vectorial force */
2278 tx = _mm256_mul_pd(fscal,dx21);
2279 ty = _mm256_mul_pd(fscal,dy21);
2280 tz = _mm256_mul_pd(fscal,dz21);
2282 /* Update vectorial force */
2283 fix2 = _mm256_add_pd(fix2,tx);
2284 fiy2 = _mm256_add_pd(fiy2,ty);
2285 fiz2 = _mm256_add_pd(fiz2,tz);
2287 fjx1 = _mm256_add_pd(fjx1,tx);
2288 fjy1 = _mm256_add_pd(fjy1,ty);
2289 fjz1 = _mm256_add_pd(fjz1,tz);
2291 /**************************
2292 * CALCULATE INTERACTIONS *
2293 **************************/
2295 r22 = _mm256_mul_pd(rsq22,rinv22);
2296 r22 = _mm256_andnot_pd(dummy_mask,r22);
2298 /* Calculate table index by multiplying r with table scale and truncate to integer */
2299 rt = _mm256_mul_pd(r22,vftabscale);
2300 vfitab = _mm256_cvttpd_epi32(rt);
2301 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
2302 vfitab = _mm_slli_epi32(vfitab,2);
2304 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2305 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
2306 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
2307 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
2308 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
2309 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
2310 Heps = _mm256_mul_pd(vfeps,H);
2311 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
2312 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
2313 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq22,FF),_mm256_mul_pd(vftabscale,rinv22)));
2317 fscal = _mm256_andnot_pd(dummy_mask,fscal);
2319 /* Calculate temporary vectorial force */
2320 tx = _mm256_mul_pd(fscal,dx22);
2321 ty = _mm256_mul_pd(fscal,dy22);
2322 tz = _mm256_mul_pd(fscal,dz22);
2324 /* Update vectorial force */
2325 fix2 = _mm256_add_pd(fix2,tx);
2326 fiy2 = _mm256_add_pd(fiy2,ty);
2327 fiz2 = _mm256_add_pd(fiz2,tz);
2329 fjx2 = _mm256_add_pd(fjx2,tx);
2330 fjy2 = _mm256_add_pd(fjy2,ty);
2331 fjz2 = _mm256_add_pd(fjz2,tz);
2333 /**************************
2334 * CALCULATE INTERACTIONS *
2335 **************************/
2337 r23 = _mm256_mul_pd(rsq23,rinv23);
2338 r23 = _mm256_andnot_pd(dummy_mask,r23);
2340 /* Calculate table index by multiplying r with table scale and truncate to integer */
2341 rt = _mm256_mul_pd(r23,vftabscale);
2342 vfitab = _mm256_cvttpd_epi32(rt);
2343 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
2344 vfitab = _mm_slli_epi32(vfitab,2);
2346 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2347 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
2348 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
2349 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
2350 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
2351 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
2352 Heps = _mm256_mul_pd(vfeps,H);
2353 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
2354 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
2355 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq23,FF),_mm256_mul_pd(vftabscale,rinv23)));
2359 fscal = _mm256_andnot_pd(dummy_mask,fscal);
2361 /* Calculate temporary vectorial force */
2362 tx = _mm256_mul_pd(fscal,dx23);
2363 ty = _mm256_mul_pd(fscal,dy23);
2364 tz = _mm256_mul_pd(fscal,dz23);
2366 /* Update vectorial force */
2367 fix2 = _mm256_add_pd(fix2,tx);
2368 fiy2 = _mm256_add_pd(fiy2,ty);
2369 fiz2 = _mm256_add_pd(fiz2,tz);
2371 fjx3 = _mm256_add_pd(fjx3,tx);
2372 fjy3 = _mm256_add_pd(fjy3,ty);
2373 fjz3 = _mm256_add_pd(fjz3,tz);
2375 /**************************
2376 * CALCULATE INTERACTIONS *
2377 **************************/
2379 r31 = _mm256_mul_pd(rsq31,rinv31);
2380 r31 = _mm256_andnot_pd(dummy_mask,r31);
2382 /* Calculate table index by multiplying r with table scale and truncate to integer */
2383 rt = _mm256_mul_pd(r31,vftabscale);
2384 vfitab = _mm256_cvttpd_epi32(rt);
2385 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
2386 vfitab = _mm_slli_epi32(vfitab,2);
2388 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2389 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
2390 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
2391 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
2392 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
2393 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
2394 Heps = _mm256_mul_pd(vfeps,H);
2395 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
2396 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
2397 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq31,FF),_mm256_mul_pd(vftabscale,rinv31)));
2401 fscal = _mm256_andnot_pd(dummy_mask,fscal);
2403 /* Calculate temporary vectorial force */
2404 tx = _mm256_mul_pd(fscal,dx31);
2405 ty = _mm256_mul_pd(fscal,dy31);
2406 tz = _mm256_mul_pd(fscal,dz31);
2408 /* Update vectorial force */
2409 fix3 = _mm256_add_pd(fix3,tx);
2410 fiy3 = _mm256_add_pd(fiy3,ty);
2411 fiz3 = _mm256_add_pd(fiz3,tz);
2413 fjx1 = _mm256_add_pd(fjx1,tx);
2414 fjy1 = _mm256_add_pd(fjy1,ty);
2415 fjz1 = _mm256_add_pd(fjz1,tz);
2417 /**************************
2418 * CALCULATE INTERACTIONS *
2419 **************************/
2421 r32 = _mm256_mul_pd(rsq32,rinv32);
2422 r32 = _mm256_andnot_pd(dummy_mask,r32);
2424 /* Calculate table index by multiplying r with table scale and truncate to integer */
2425 rt = _mm256_mul_pd(r32,vftabscale);
2426 vfitab = _mm256_cvttpd_epi32(rt);
2427 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
2428 vfitab = _mm_slli_epi32(vfitab,2);
2430 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2431 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
2432 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
2433 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
2434 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
2435 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
2436 Heps = _mm256_mul_pd(vfeps,H);
2437 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
2438 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
2439 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq32,FF),_mm256_mul_pd(vftabscale,rinv32)));
2443 fscal = _mm256_andnot_pd(dummy_mask,fscal);
2445 /* Calculate temporary vectorial force */
2446 tx = _mm256_mul_pd(fscal,dx32);
2447 ty = _mm256_mul_pd(fscal,dy32);
2448 tz = _mm256_mul_pd(fscal,dz32);
2450 /* Update vectorial force */
2451 fix3 = _mm256_add_pd(fix3,tx);
2452 fiy3 = _mm256_add_pd(fiy3,ty);
2453 fiz3 = _mm256_add_pd(fiz3,tz);
2455 fjx2 = _mm256_add_pd(fjx2,tx);
2456 fjy2 = _mm256_add_pd(fjy2,ty);
2457 fjz2 = _mm256_add_pd(fjz2,tz);
2459 /**************************
2460 * CALCULATE INTERACTIONS *
2461 **************************/
2463 r33 = _mm256_mul_pd(rsq33,rinv33);
2464 r33 = _mm256_andnot_pd(dummy_mask,r33);
2466 /* Calculate table index by multiplying r with table scale and truncate to integer */
2467 rt = _mm256_mul_pd(r33,vftabscale);
2468 vfitab = _mm256_cvttpd_epi32(rt);
2469 vfeps = _mm256_sub_pd(rt,_mm256_round_pd(rt, _MM_FROUND_FLOOR));
2470 vfitab = _mm_slli_epi32(vfitab,2);
2472 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2473 Y = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,0) );
2474 F = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,1) );
2475 G = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,2) );
2476 H = _mm256_load_pd( vftab + _mm_extract_epi32(vfitab,3) );
2477 GMX_MM256_FULLTRANSPOSE4_PD(Y,F,G,H);
2478 Heps = _mm256_mul_pd(vfeps,H);
2479 Fp = _mm256_add_pd(F,_mm256_mul_pd(vfeps,_mm256_add_pd(G,Heps)));
2480 FF = _mm256_add_pd(Fp,_mm256_mul_pd(vfeps,_mm256_add_pd(G,_mm256_add_pd(Heps,Heps))));
2481 felec = _mm256_xor_pd(signbit,_mm256_mul_pd(_mm256_mul_pd(qq33,FF),_mm256_mul_pd(vftabscale,rinv33)));
2485 fscal = _mm256_andnot_pd(dummy_mask,fscal);
2487 /* Calculate temporary vectorial force */
2488 tx = _mm256_mul_pd(fscal,dx33);
2489 ty = _mm256_mul_pd(fscal,dy33);
2490 tz = _mm256_mul_pd(fscal,dz33);
2492 /* Update vectorial force */
2493 fix3 = _mm256_add_pd(fix3,tx);
2494 fiy3 = _mm256_add_pd(fiy3,ty);
2495 fiz3 = _mm256_add_pd(fiz3,tz);
2497 fjx3 = _mm256_add_pd(fjx3,tx);
2498 fjy3 = _mm256_add_pd(fjy3,ty);
2499 fjz3 = _mm256_add_pd(fjz3,tz);
2501 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
2502 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
2503 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
2504 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
2506 gmx_mm256_decrement_4rvec_4ptr_swizzle_pd(fjptrA,fjptrB,fjptrC,fjptrD,
2507 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,
2508 fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
2510 /* Inner loop uses 390 flops */
2513 /* End of innermost loop */
2515 gmx_mm256_update_iforce_4atom_swizzle_pd(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
2516 f+i_coord_offset,fshift+i_shift_offset);
2518 /* Increment number of inner iterations */
2519 inneriter += j_index_end - j_index_start;
2521 /* Outer loop uses 24 flops */
2524 /* Increment number of outer iterations */
2527 /* Update outer/inner flops */
2529 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W4W4_F,outeriter*24 + inneriter*390);