2 * Note: this file was generated by the Gromacs avx_128_fma_single kernel generator.
4 * This source code is part of
8 * Copyright (c) 2001-2012, The GROMACS Development Team
10 * Gromacs is a library for molecular simulation and trajectory analysis,
11 * written by Erik Lindahl, David van der Spoel, Berk Hess, and others - for
12 * a full list of developers and information, check out http://www.gromacs.org
14 * This program is free software; you can redistribute it and/or modify it under
15 * the terms of the GNU Lesser General Public License as published by the Free
16 * Software Foundation; either version 2 of the License, or (at your option) any
19 * To help fund GROMACS development, we humbly ask that you cite
20 * the papers people have written on it - you can find them on the website.
28 #include "../nb_kernel.h"
29 #include "types/simple.h"
33 #include "gmx_math_x86_avx_128_fma_single.h"
34 #include "kernelutil_x86_avx_128_fma_single.h"
37 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwNone_GeomW3W3_VF_avx_128_fma_single
38 * Electrostatics interaction: Ewald
39 * VdW interaction: None
40 * Geometry: Water3-Water3
41 * Calculate force/pot: PotentialAndForce
44 nb_kernel_ElecEw_VdwNone_GeomW3W3_VF_avx_128_fma_single
45 (t_nblist * gmx_restrict nlist,
46 rvec * gmx_restrict xx,
47 rvec * gmx_restrict ff,
48 t_forcerec * gmx_restrict fr,
49 t_mdatoms * gmx_restrict mdatoms,
50 nb_kernel_data_t * gmx_restrict kernel_data,
51 t_nrnb * gmx_restrict nrnb)
53 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
54 * just 0 for non-waters.
55 * Suffixes A,B,C,D refer to j loop unrolling done with AVX_128, e.g. for the four different
56 * jnr indices corresponding to data put in the four positions in the SIMD register.
58 int i_shift_offset,i_coord_offset,outeriter,inneriter;
59 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
60 int jnrA,jnrB,jnrC,jnrD;
61 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
62 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
63 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
65 real *shiftvec,*fshift,*x,*f;
66 real *fjptrA,*fjptrB,*fjptrC,*fjptrD;
68 __m128 fscal,rcutoff,rcutoff2,jidxall;
70 __m128 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
72 __m128 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
74 __m128 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
75 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
76 __m128 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
77 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
78 __m128 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
79 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
80 __m128 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
81 __m128 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
82 __m128 dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
83 __m128 dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
84 __m128 dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
85 __m128 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
86 __m128 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
87 __m128 dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
88 __m128 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
89 __m128 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
90 __m128 velec,felec,velecsum,facel,crf,krf,krf2;
93 __m128 ewtabscale,eweps,twoeweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
94 __m128 beta,beta2,beta3,zeta2,pmecorrF,pmecorrV,rinv3;
96 __m128 dummy_mask,cutoff_mask;
97 __m128 signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
98 __m128 one = _mm_set1_ps(1.0);
99 __m128 two = _mm_set1_ps(2.0);
105 jindex = nlist->jindex;
107 shiftidx = nlist->shift;
109 shiftvec = fr->shift_vec[0];
110 fshift = fr->fshift[0];
111 facel = _mm_set1_ps(fr->epsfac);
112 charge = mdatoms->chargeA;
114 sh_ewald = _mm_set1_ps(fr->ic->sh_ewald);
115 beta = _mm_set1_ps(fr->ic->ewaldcoeff);
116 beta2 = _mm_mul_ps(beta,beta);
117 beta3 = _mm_mul_ps(beta,beta2);
118 ewtab = fr->ic->tabq_coul_FDV0;
119 ewtabscale = _mm_set1_ps(fr->ic->tabq_scale);
120 ewtabhalfspace = _mm_set1_ps(0.5/fr->ic->tabq_scale);
122 /* Setup water-specific parameters */
123 inr = nlist->iinr[0];
124 iq0 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+0]));
125 iq1 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
126 iq2 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
128 jq0 = _mm_set1_ps(charge[inr+0]);
129 jq1 = _mm_set1_ps(charge[inr+1]);
130 jq2 = _mm_set1_ps(charge[inr+2]);
131 qq00 = _mm_mul_ps(iq0,jq0);
132 qq01 = _mm_mul_ps(iq0,jq1);
133 qq02 = _mm_mul_ps(iq0,jq2);
134 qq10 = _mm_mul_ps(iq1,jq0);
135 qq11 = _mm_mul_ps(iq1,jq1);
136 qq12 = _mm_mul_ps(iq1,jq2);
137 qq20 = _mm_mul_ps(iq2,jq0);
138 qq21 = _mm_mul_ps(iq2,jq1);
139 qq22 = _mm_mul_ps(iq2,jq2);
141 /* Avoid stupid compiler warnings */
142 jnrA = jnrB = jnrC = jnrD = 0;
151 for(iidx=0;iidx<4*DIM;iidx++)
156 /* Start outer loop over neighborlists */
157 for(iidx=0; iidx<nri; iidx++)
159 /* Load shift vector for this list */
160 i_shift_offset = DIM*shiftidx[iidx];
162 /* Load limits for loop over neighbors */
163 j_index_start = jindex[iidx];
164 j_index_end = jindex[iidx+1];
166 /* Get outer coordinate index */
168 i_coord_offset = DIM*inr;
170 /* Load i particle coords and add shift vector */
171 gmx_mm_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset,
172 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
174 fix0 = _mm_setzero_ps();
175 fiy0 = _mm_setzero_ps();
176 fiz0 = _mm_setzero_ps();
177 fix1 = _mm_setzero_ps();
178 fiy1 = _mm_setzero_ps();
179 fiz1 = _mm_setzero_ps();
180 fix2 = _mm_setzero_ps();
181 fiy2 = _mm_setzero_ps();
182 fiz2 = _mm_setzero_ps();
184 /* Reset potential sums */
185 velecsum = _mm_setzero_ps();
187 /* Start inner kernel loop */
188 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
191 /* Get j neighbor index, and coordinate index */
196 j_coord_offsetA = DIM*jnrA;
197 j_coord_offsetB = DIM*jnrB;
198 j_coord_offsetC = DIM*jnrC;
199 j_coord_offsetD = DIM*jnrD;
201 /* load j atom coordinates */
202 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
203 x+j_coord_offsetC,x+j_coord_offsetD,
204 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
206 /* Calculate displacement vector */
207 dx00 = _mm_sub_ps(ix0,jx0);
208 dy00 = _mm_sub_ps(iy0,jy0);
209 dz00 = _mm_sub_ps(iz0,jz0);
210 dx01 = _mm_sub_ps(ix0,jx1);
211 dy01 = _mm_sub_ps(iy0,jy1);
212 dz01 = _mm_sub_ps(iz0,jz1);
213 dx02 = _mm_sub_ps(ix0,jx2);
214 dy02 = _mm_sub_ps(iy0,jy2);
215 dz02 = _mm_sub_ps(iz0,jz2);
216 dx10 = _mm_sub_ps(ix1,jx0);
217 dy10 = _mm_sub_ps(iy1,jy0);
218 dz10 = _mm_sub_ps(iz1,jz0);
219 dx11 = _mm_sub_ps(ix1,jx1);
220 dy11 = _mm_sub_ps(iy1,jy1);
221 dz11 = _mm_sub_ps(iz1,jz1);
222 dx12 = _mm_sub_ps(ix1,jx2);
223 dy12 = _mm_sub_ps(iy1,jy2);
224 dz12 = _mm_sub_ps(iz1,jz2);
225 dx20 = _mm_sub_ps(ix2,jx0);
226 dy20 = _mm_sub_ps(iy2,jy0);
227 dz20 = _mm_sub_ps(iz2,jz0);
228 dx21 = _mm_sub_ps(ix2,jx1);
229 dy21 = _mm_sub_ps(iy2,jy1);
230 dz21 = _mm_sub_ps(iz2,jz1);
231 dx22 = _mm_sub_ps(ix2,jx2);
232 dy22 = _mm_sub_ps(iy2,jy2);
233 dz22 = _mm_sub_ps(iz2,jz2);
235 /* Calculate squared distance and things based on it */
236 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
237 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
238 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
239 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
240 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
241 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
242 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
243 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
244 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
246 rinv00 = gmx_mm_invsqrt_ps(rsq00);
247 rinv01 = gmx_mm_invsqrt_ps(rsq01);
248 rinv02 = gmx_mm_invsqrt_ps(rsq02);
249 rinv10 = gmx_mm_invsqrt_ps(rsq10);
250 rinv11 = gmx_mm_invsqrt_ps(rsq11);
251 rinv12 = gmx_mm_invsqrt_ps(rsq12);
252 rinv20 = gmx_mm_invsqrt_ps(rsq20);
253 rinv21 = gmx_mm_invsqrt_ps(rsq21);
254 rinv22 = gmx_mm_invsqrt_ps(rsq22);
256 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
257 rinvsq01 = _mm_mul_ps(rinv01,rinv01);
258 rinvsq02 = _mm_mul_ps(rinv02,rinv02);
259 rinvsq10 = _mm_mul_ps(rinv10,rinv10);
260 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
261 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
262 rinvsq20 = _mm_mul_ps(rinv20,rinv20);
263 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
264 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
266 fjx0 = _mm_setzero_ps();
267 fjy0 = _mm_setzero_ps();
268 fjz0 = _mm_setzero_ps();
269 fjx1 = _mm_setzero_ps();
270 fjy1 = _mm_setzero_ps();
271 fjz1 = _mm_setzero_ps();
272 fjx2 = _mm_setzero_ps();
273 fjy2 = _mm_setzero_ps();
274 fjz2 = _mm_setzero_ps();
276 /**************************
277 * CALCULATE INTERACTIONS *
278 **************************/
280 r00 = _mm_mul_ps(rsq00,rinv00);
282 /* EWALD ELECTROSTATICS */
284 /* Analytical PME correction */
285 zeta2 = _mm_mul_ps(beta2,rsq00);
286 rinv3 = _mm_mul_ps(rinvsq00,rinv00);
287 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
288 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
289 felec = _mm_mul_ps(qq00,felec);
290 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
291 velec = _mm_nmacc_ps(pmecorrV,beta,rinv00);
292 velec = _mm_mul_ps(qq00,velec);
294 /* Update potential sum for this i atom from the interaction with this j atom. */
295 velecsum = _mm_add_ps(velecsum,velec);
299 /* Update vectorial force */
300 fix0 = _mm_macc_ps(dx00,fscal,fix0);
301 fiy0 = _mm_macc_ps(dy00,fscal,fiy0);
302 fiz0 = _mm_macc_ps(dz00,fscal,fiz0);
304 fjx0 = _mm_macc_ps(dx00,fscal,fjx0);
305 fjy0 = _mm_macc_ps(dy00,fscal,fjy0);
306 fjz0 = _mm_macc_ps(dz00,fscal,fjz0);
308 /**************************
309 * CALCULATE INTERACTIONS *
310 **************************/
312 r01 = _mm_mul_ps(rsq01,rinv01);
314 /* EWALD ELECTROSTATICS */
316 /* Analytical PME correction */
317 zeta2 = _mm_mul_ps(beta2,rsq01);
318 rinv3 = _mm_mul_ps(rinvsq01,rinv01);
319 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
320 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
321 felec = _mm_mul_ps(qq01,felec);
322 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
323 velec = _mm_nmacc_ps(pmecorrV,beta,rinv01);
324 velec = _mm_mul_ps(qq01,velec);
326 /* Update potential sum for this i atom from the interaction with this j atom. */
327 velecsum = _mm_add_ps(velecsum,velec);
331 /* Update vectorial force */
332 fix0 = _mm_macc_ps(dx01,fscal,fix0);
333 fiy0 = _mm_macc_ps(dy01,fscal,fiy0);
334 fiz0 = _mm_macc_ps(dz01,fscal,fiz0);
336 fjx1 = _mm_macc_ps(dx01,fscal,fjx1);
337 fjy1 = _mm_macc_ps(dy01,fscal,fjy1);
338 fjz1 = _mm_macc_ps(dz01,fscal,fjz1);
340 /**************************
341 * CALCULATE INTERACTIONS *
342 **************************/
344 r02 = _mm_mul_ps(rsq02,rinv02);
346 /* EWALD ELECTROSTATICS */
348 /* Analytical PME correction */
349 zeta2 = _mm_mul_ps(beta2,rsq02);
350 rinv3 = _mm_mul_ps(rinvsq02,rinv02);
351 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
352 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
353 felec = _mm_mul_ps(qq02,felec);
354 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
355 velec = _mm_nmacc_ps(pmecorrV,beta,rinv02);
356 velec = _mm_mul_ps(qq02,velec);
358 /* Update potential sum for this i atom from the interaction with this j atom. */
359 velecsum = _mm_add_ps(velecsum,velec);
363 /* Update vectorial force */
364 fix0 = _mm_macc_ps(dx02,fscal,fix0);
365 fiy0 = _mm_macc_ps(dy02,fscal,fiy0);
366 fiz0 = _mm_macc_ps(dz02,fscal,fiz0);
368 fjx2 = _mm_macc_ps(dx02,fscal,fjx2);
369 fjy2 = _mm_macc_ps(dy02,fscal,fjy2);
370 fjz2 = _mm_macc_ps(dz02,fscal,fjz2);
372 /**************************
373 * CALCULATE INTERACTIONS *
374 **************************/
376 r10 = _mm_mul_ps(rsq10,rinv10);
378 /* EWALD ELECTROSTATICS */
380 /* Analytical PME correction */
381 zeta2 = _mm_mul_ps(beta2,rsq10);
382 rinv3 = _mm_mul_ps(rinvsq10,rinv10);
383 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
384 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
385 felec = _mm_mul_ps(qq10,felec);
386 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
387 velec = _mm_nmacc_ps(pmecorrV,beta,rinv10);
388 velec = _mm_mul_ps(qq10,velec);
390 /* Update potential sum for this i atom from the interaction with this j atom. */
391 velecsum = _mm_add_ps(velecsum,velec);
395 /* Update vectorial force */
396 fix1 = _mm_macc_ps(dx10,fscal,fix1);
397 fiy1 = _mm_macc_ps(dy10,fscal,fiy1);
398 fiz1 = _mm_macc_ps(dz10,fscal,fiz1);
400 fjx0 = _mm_macc_ps(dx10,fscal,fjx0);
401 fjy0 = _mm_macc_ps(dy10,fscal,fjy0);
402 fjz0 = _mm_macc_ps(dz10,fscal,fjz0);
404 /**************************
405 * CALCULATE INTERACTIONS *
406 **************************/
408 r11 = _mm_mul_ps(rsq11,rinv11);
410 /* EWALD ELECTROSTATICS */
412 /* Analytical PME correction */
413 zeta2 = _mm_mul_ps(beta2,rsq11);
414 rinv3 = _mm_mul_ps(rinvsq11,rinv11);
415 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
416 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
417 felec = _mm_mul_ps(qq11,felec);
418 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
419 velec = _mm_nmacc_ps(pmecorrV,beta,rinv11);
420 velec = _mm_mul_ps(qq11,velec);
422 /* Update potential sum for this i atom from the interaction with this j atom. */
423 velecsum = _mm_add_ps(velecsum,velec);
427 /* Update vectorial force */
428 fix1 = _mm_macc_ps(dx11,fscal,fix1);
429 fiy1 = _mm_macc_ps(dy11,fscal,fiy1);
430 fiz1 = _mm_macc_ps(dz11,fscal,fiz1);
432 fjx1 = _mm_macc_ps(dx11,fscal,fjx1);
433 fjy1 = _mm_macc_ps(dy11,fscal,fjy1);
434 fjz1 = _mm_macc_ps(dz11,fscal,fjz1);
436 /**************************
437 * CALCULATE INTERACTIONS *
438 **************************/
440 r12 = _mm_mul_ps(rsq12,rinv12);
442 /* EWALD ELECTROSTATICS */
444 /* Analytical PME correction */
445 zeta2 = _mm_mul_ps(beta2,rsq12);
446 rinv3 = _mm_mul_ps(rinvsq12,rinv12);
447 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
448 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
449 felec = _mm_mul_ps(qq12,felec);
450 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
451 velec = _mm_nmacc_ps(pmecorrV,beta,rinv12);
452 velec = _mm_mul_ps(qq12,velec);
454 /* Update potential sum for this i atom from the interaction with this j atom. */
455 velecsum = _mm_add_ps(velecsum,velec);
459 /* Update vectorial force */
460 fix1 = _mm_macc_ps(dx12,fscal,fix1);
461 fiy1 = _mm_macc_ps(dy12,fscal,fiy1);
462 fiz1 = _mm_macc_ps(dz12,fscal,fiz1);
464 fjx2 = _mm_macc_ps(dx12,fscal,fjx2);
465 fjy2 = _mm_macc_ps(dy12,fscal,fjy2);
466 fjz2 = _mm_macc_ps(dz12,fscal,fjz2);
468 /**************************
469 * CALCULATE INTERACTIONS *
470 **************************/
472 r20 = _mm_mul_ps(rsq20,rinv20);
474 /* EWALD ELECTROSTATICS */
476 /* Analytical PME correction */
477 zeta2 = _mm_mul_ps(beta2,rsq20);
478 rinv3 = _mm_mul_ps(rinvsq20,rinv20);
479 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
480 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
481 felec = _mm_mul_ps(qq20,felec);
482 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
483 velec = _mm_nmacc_ps(pmecorrV,beta,rinv20);
484 velec = _mm_mul_ps(qq20,velec);
486 /* Update potential sum for this i atom from the interaction with this j atom. */
487 velecsum = _mm_add_ps(velecsum,velec);
491 /* Update vectorial force */
492 fix2 = _mm_macc_ps(dx20,fscal,fix2);
493 fiy2 = _mm_macc_ps(dy20,fscal,fiy2);
494 fiz2 = _mm_macc_ps(dz20,fscal,fiz2);
496 fjx0 = _mm_macc_ps(dx20,fscal,fjx0);
497 fjy0 = _mm_macc_ps(dy20,fscal,fjy0);
498 fjz0 = _mm_macc_ps(dz20,fscal,fjz0);
500 /**************************
501 * CALCULATE INTERACTIONS *
502 **************************/
504 r21 = _mm_mul_ps(rsq21,rinv21);
506 /* EWALD ELECTROSTATICS */
508 /* Analytical PME correction */
509 zeta2 = _mm_mul_ps(beta2,rsq21);
510 rinv3 = _mm_mul_ps(rinvsq21,rinv21);
511 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
512 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
513 felec = _mm_mul_ps(qq21,felec);
514 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
515 velec = _mm_nmacc_ps(pmecorrV,beta,rinv21);
516 velec = _mm_mul_ps(qq21,velec);
518 /* Update potential sum for this i atom from the interaction with this j atom. */
519 velecsum = _mm_add_ps(velecsum,velec);
523 /* Update vectorial force */
524 fix2 = _mm_macc_ps(dx21,fscal,fix2);
525 fiy2 = _mm_macc_ps(dy21,fscal,fiy2);
526 fiz2 = _mm_macc_ps(dz21,fscal,fiz2);
528 fjx1 = _mm_macc_ps(dx21,fscal,fjx1);
529 fjy1 = _mm_macc_ps(dy21,fscal,fjy1);
530 fjz1 = _mm_macc_ps(dz21,fscal,fjz1);
532 /**************************
533 * CALCULATE INTERACTIONS *
534 **************************/
536 r22 = _mm_mul_ps(rsq22,rinv22);
538 /* EWALD ELECTROSTATICS */
540 /* Analytical PME correction */
541 zeta2 = _mm_mul_ps(beta2,rsq22);
542 rinv3 = _mm_mul_ps(rinvsq22,rinv22);
543 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
544 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
545 felec = _mm_mul_ps(qq22,felec);
546 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
547 velec = _mm_nmacc_ps(pmecorrV,beta,rinv22);
548 velec = _mm_mul_ps(qq22,velec);
550 /* Update potential sum for this i atom from the interaction with this j atom. */
551 velecsum = _mm_add_ps(velecsum,velec);
555 /* Update vectorial force */
556 fix2 = _mm_macc_ps(dx22,fscal,fix2);
557 fiy2 = _mm_macc_ps(dy22,fscal,fiy2);
558 fiz2 = _mm_macc_ps(dz22,fscal,fiz2);
560 fjx2 = _mm_macc_ps(dx22,fscal,fjx2);
561 fjy2 = _mm_macc_ps(dy22,fscal,fjy2);
562 fjz2 = _mm_macc_ps(dz22,fscal,fjz2);
564 fjptrA = f+j_coord_offsetA;
565 fjptrB = f+j_coord_offsetB;
566 fjptrC = f+j_coord_offsetC;
567 fjptrD = f+j_coord_offsetD;
569 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
570 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
572 /* Inner loop uses 261 flops */
578 /* Get j neighbor index, and coordinate index */
579 jnrlistA = jjnr[jidx];
580 jnrlistB = jjnr[jidx+1];
581 jnrlistC = jjnr[jidx+2];
582 jnrlistD = jjnr[jidx+3];
583 /* Sign of each element will be negative for non-real atoms.
584 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
585 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
587 dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
588 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
589 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
590 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
591 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
592 j_coord_offsetA = DIM*jnrA;
593 j_coord_offsetB = DIM*jnrB;
594 j_coord_offsetC = DIM*jnrC;
595 j_coord_offsetD = DIM*jnrD;
597 /* load j atom coordinates */
598 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
599 x+j_coord_offsetC,x+j_coord_offsetD,
600 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
602 /* Calculate displacement vector */
603 dx00 = _mm_sub_ps(ix0,jx0);
604 dy00 = _mm_sub_ps(iy0,jy0);
605 dz00 = _mm_sub_ps(iz0,jz0);
606 dx01 = _mm_sub_ps(ix0,jx1);
607 dy01 = _mm_sub_ps(iy0,jy1);
608 dz01 = _mm_sub_ps(iz0,jz1);
609 dx02 = _mm_sub_ps(ix0,jx2);
610 dy02 = _mm_sub_ps(iy0,jy2);
611 dz02 = _mm_sub_ps(iz0,jz2);
612 dx10 = _mm_sub_ps(ix1,jx0);
613 dy10 = _mm_sub_ps(iy1,jy0);
614 dz10 = _mm_sub_ps(iz1,jz0);
615 dx11 = _mm_sub_ps(ix1,jx1);
616 dy11 = _mm_sub_ps(iy1,jy1);
617 dz11 = _mm_sub_ps(iz1,jz1);
618 dx12 = _mm_sub_ps(ix1,jx2);
619 dy12 = _mm_sub_ps(iy1,jy2);
620 dz12 = _mm_sub_ps(iz1,jz2);
621 dx20 = _mm_sub_ps(ix2,jx0);
622 dy20 = _mm_sub_ps(iy2,jy0);
623 dz20 = _mm_sub_ps(iz2,jz0);
624 dx21 = _mm_sub_ps(ix2,jx1);
625 dy21 = _mm_sub_ps(iy2,jy1);
626 dz21 = _mm_sub_ps(iz2,jz1);
627 dx22 = _mm_sub_ps(ix2,jx2);
628 dy22 = _mm_sub_ps(iy2,jy2);
629 dz22 = _mm_sub_ps(iz2,jz2);
631 /* Calculate squared distance and things based on it */
632 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
633 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
634 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
635 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
636 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
637 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
638 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
639 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
640 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
642 rinv00 = gmx_mm_invsqrt_ps(rsq00);
643 rinv01 = gmx_mm_invsqrt_ps(rsq01);
644 rinv02 = gmx_mm_invsqrt_ps(rsq02);
645 rinv10 = gmx_mm_invsqrt_ps(rsq10);
646 rinv11 = gmx_mm_invsqrt_ps(rsq11);
647 rinv12 = gmx_mm_invsqrt_ps(rsq12);
648 rinv20 = gmx_mm_invsqrt_ps(rsq20);
649 rinv21 = gmx_mm_invsqrt_ps(rsq21);
650 rinv22 = gmx_mm_invsqrt_ps(rsq22);
652 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
653 rinvsq01 = _mm_mul_ps(rinv01,rinv01);
654 rinvsq02 = _mm_mul_ps(rinv02,rinv02);
655 rinvsq10 = _mm_mul_ps(rinv10,rinv10);
656 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
657 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
658 rinvsq20 = _mm_mul_ps(rinv20,rinv20);
659 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
660 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
662 fjx0 = _mm_setzero_ps();
663 fjy0 = _mm_setzero_ps();
664 fjz0 = _mm_setzero_ps();
665 fjx1 = _mm_setzero_ps();
666 fjy1 = _mm_setzero_ps();
667 fjz1 = _mm_setzero_ps();
668 fjx2 = _mm_setzero_ps();
669 fjy2 = _mm_setzero_ps();
670 fjz2 = _mm_setzero_ps();
672 /**************************
673 * CALCULATE INTERACTIONS *
674 **************************/
676 r00 = _mm_mul_ps(rsq00,rinv00);
677 r00 = _mm_andnot_ps(dummy_mask,r00);
679 /* EWALD ELECTROSTATICS */
681 /* Analytical PME correction */
682 zeta2 = _mm_mul_ps(beta2,rsq00);
683 rinv3 = _mm_mul_ps(rinvsq00,rinv00);
684 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
685 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
686 felec = _mm_mul_ps(qq00,felec);
687 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
688 velec = _mm_nmacc_ps(pmecorrV,beta,rinv00);
689 velec = _mm_mul_ps(qq00,velec);
691 /* Update potential sum for this i atom from the interaction with this j atom. */
692 velec = _mm_andnot_ps(dummy_mask,velec);
693 velecsum = _mm_add_ps(velecsum,velec);
697 fscal = _mm_andnot_ps(dummy_mask,fscal);
699 /* Update vectorial force */
700 fix0 = _mm_macc_ps(dx00,fscal,fix0);
701 fiy0 = _mm_macc_ps(dy00,fscal,fiy0);
702 fiz0 = _mm_macc_ps(dz00,fscal,fiz0);
704 fjx0 = _mm_macc_ps(dx00,fscal,fjx0);
705 fjy0 = _mm_macc_ps(dy00,fscal,fjy0);
706 fjz0 = _mm_macc_ps(dz00,fscal,fjz0);
708 /**************************
709 * CALCULATE INTERACTIONS *
710 **************************/
712 r01 = _mm_mul_ps(rsq01,rinv01);
713 r01 = _mm_andnot_ps(dummy_mask,r01);
715 /* EWALD ELECTROSTATICS */
717 /* Analytical PME correction */
718 zeta2 = _mm_mul_ps(beta2,rsq01);
719 rinv3 = _mm_mul_ps(rinvsq01,rinv01);
720 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
721 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
722 felec = _mm_mul_ps(qq01,felec);
723 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
724 velec = _mm_nmacc_ps(pmecorrV,beta,rinv01);
725 velec = _mm_mul_ps(qq01,velec);
727 /* Update potential sum for this i atom from the interaction with this j atom. */
728 velec = _mm_andnot_ps(dummy_mask,velec);
729 velecsum = _mm_add_ps(velecsum,velec);
733 fscal = _mm_andnot_ps(dummy_mask,fscal);
735 /* Update vectorial force */
736 fix0 = _mm_macc_ps(dx01,fscal,fix0);
737 fiy0 = _mm_macc_ps(dy01,fscal,fiy0);
738 fiz0 = _mm_macc_ps(dz01,fscal,fiz0);
740 fjx1 = _mm_macc_ps(dx01,fscal,fjx1);
741 fjy1 = _mm_macc_ps(dy01,fscal,fjy1);
742 fjz1 = _mm_macc_ps(dz01,fscal,fjz1);
744 /**************************
745 * CALCULATE INTERACTIONS *
746 **************************/
748 r02 = _mm_mul_ps(rsq02,rinv02);
749 r02 = _mm_andnot_ps(dummy_mask,r02);
751 /* EWALD ELECTROSTATICS */
753 /* Analytical PME correction */
754 zeta2 = _mm_mul_ps(beta2,rsq02);
755 rinv3 = _mm_mul_ps(rinvsq02,rinv02);
756 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
757 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
758 felec = _mm_mul_ps(qq02,felec);
759 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
760 velec = _mm_nmacc_ps(pmecorrV,beta,rinv02);
761 velec = _mm_mul_ps(qq02,velec);
763 /* Update potential sum for this i atom from the interaction with this j atom. */
764 velec = _mm_andnot_ps(dummy_mask,velec);
765 velecsum = _mm_add_ps(velecsum,velec);
769 fscal = _mm_andnot_ps(dummy_mask,fscal);
771 /* Update vectorial force */
772 fix0 = _mm_macc_ps(dx02,fscal,fix0);
773 fiy0 = _mm_macc_ps(dy02,fscal,fiy0);
774 fiz0 = _mm_macc_ps(dz02,fscal,fiz0);
776 fjx2 = _mm_macc_ps(dx02,fscal,fjx2);
777 fjy2 = _mm_macc_ps(dy02,fscal,fjy2);
778 fjz2 = _mm_macc_ps(dz02,fscal,fjz2);
780 /**************************
781 * CALCULATE INTERACTIONS *
782 **************************/
784 r10 = _mm_mul_ps(rsq10,rinv10);
785 r10 = _mm_andnot_ps(dummy_mask,r10);
787 /* EWALD ELECTROSTATICS */
789 /* Analytical PME correction */
790 zeta2 = _mm_mul_ps(beta2,rsq10);
791 rinv3 = _mm_mul_ps(rinvsq10,rinv10);
792 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
793 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
794 felec = _mm_mul_ps(qq10,felec);
795 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
796 velec = _mm_nmacc_ps(pmecorrV,beta,rinv10);
797 velec = _mm_mul_ps(qq10,velec);
799 /* Update potential sum for this i atom from the interaction with this j atom. */
800 velec = _mm_andnot_ps(dummy_mask,velec);
801 velecsum = _mm_add_ps(velecsum,velec);
805 fscal = _mm_andnot_ps(dummy_mask,fscal);
807 /* Update vectorial force */
808 fix1 = _mm_macc_ps(dx10,fscal,fix1);
809 fiy1 = _mm_macc_ps(dy10,fscal,fiy1);
810 fiz1 = _mm_macc_ps(dz10,fscal,fiz1);
812 fjx0 = _mm_macc_ps(dx10,fscal,fjx0);
813 fjy0 = _mm_macc_ps(dy10,fscal,fjy0);
814 fjz0 = _mm_macc_ps(dz10,fscal,fjz0);
816 /**************************
817 * CALCULATE INTERACTIONS *
818 **************************/
820 r11 = _mm_mul_ps(rsq11,rinv11);
821 r11 = _mm_andnot_ps(dummy_mask,r11);
823 /* EWALD ELECTROSTATICS */
825 /* Analytical PME correction */
826 zeta2 = _mm_mul_ps(beta2,rsq11);
827 rinv3 = _mm_mul_ps(rinvsq11,rinv11);
828 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
829 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
830 felec = _mm_mul_ps(qq11,felec);
831 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
832 velec = _mm_nmacc_ps(pmecorrV,beta,rinv11);
833 velec = _mm_mul_ps(qq11,velec);
835 /* Update potential sum for this i atom from the interaction with this j atom. */
836 velec = _mm_andnot_ps(dummy_mask,velec);
837 velecsum = _mm_add_ps(velecsum,velec);
841 fscal = _mm_andnot_ps(dummy_mask,fscal);
843 /* Update vectorial force */
844 fix1 = _mm_macc_ps(dx11,fscal,fix1);
845 fiy1 = _mm_macc_ps(dy11,fscal,fiy1);
846 fiz1 = _mm_macc_ps(dz11,fscal,fiz1);
848 fjx1 = _mm_macc_ps(dx11,fscal,fjx1);
849 fjy1 = _mm_macc_ps(dy11,fscal,fjy1);
850 fjz1 = _mm_macc_ps(dz11,fscal,fjz1);
852 /**************************
853 * CALCULATE INTERACTIONS *
854 **************************/
856 r12 = _mm_mul_ps(rsq12,rinv12);
857 r12 = _mm_andnot_ps(dummy_mask,r12);
859 /* EWALD ELECTROSTATICS */
861 /* Analytical PME correction */
862 zeta2 = _mm_mul_ps(beta2,rsq12);
863 rinv3 = _mm_mul_ps(rinvsq12,rinv12);
864 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
865 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
866 felec = _mm_mul_ps(qq12,felec);
867 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
868 velec = _mm_nmacc_ps(pmecorrV,beta,rinv12);
869 velec = _mm_mul_ps(qq12,velec);
871 /* Update potential sum for this i atom from the interaction with this j atom. */
872 velec = _mm_andnot_ps(dummy_mask,velec);
873 velecsum = _mm_add_ps(velecsum,velec);
877 fscal = _mm_andnot_ps(dummy_mask,fscal);
879 /* Update vectorial force */
880 fix1 = _mm_macc_ps(dx12,fscal,fix1);
881 fiy1 = _mm_macc_ps(dy12,fscal,fiy1);
882 fiz1 = _mm_macc_ps(dz12,fscal,fiz1);
884 fjx2 = _mm_macc_ps(dx12,fscal,fjx2);
885 fjy2 = _mm_macc_ps(dy12,fscal,fjy2);
886 fjz2 = _mm_macc_ps(dz12,fscal,fjz2);
888 /**************************
889 * CALCULATE INTERACTIONS *
890 **************************/
892 r20 = _mm_mul_ps(rsq20,rinv20);
893 r20 = _mm_andnot_ps(dummy_mask,r20);
895 /* EWALD ELECTROSTATICS */
897 /* Analytical PME correction */
898 zeta2 = _mm_mul_ps(beta2,rsq20);
899 rinv3 = _mm_mul_ps(rinvsq20,rinv20);
900 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
901 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
902 felec = _mm_mul_ps(qq20,felec);
903 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
904 velec = _mm_nmacc_ps(pmecorrV,beta,rinv20);
905 velec = _mm_mul_ps(qq20,velec);
907 /* Update potential sum for this i atom from the interaction with this j atom. */
908 velec = _mm_andnot_ps(dummy_mask,velec);
909 velecsum = _mm_add_ps(velecsum,velec);
913 fscal = _mm_andnot_ps(dummy_mask,fscal);
915 /* Update vectorial force */
916 fix2 = _mm_macc_ps(dx20,fscal,fix2);
917 fiy2 = _mm_macc_ps(dy20,fscal,fiy2);
918 fiz2 = _mm_macc_ps(dz20,fscal,fiz2);
920 fjx0 = _mm_macc_ps(dx20,fscal,fjx0);
921 fjy0 = _mm_macc_ps(dy20,fscal,fjy0);
922 fjz0 = _mm_macc_ps(dz20,fscal,fjz0);
924 /**************************
925 * CALCULATE INTERACTIONS *
926 **************************/
928 r21 = _mm_mul_ps(rsq21,rinv21);
929 r21 = _mm_andnot_ps(dummy_mask,r21);
931 /* EWALD ELECTROSTATICS */
933 /* Analytical PME correction */
934 zeta2 = _mm_mul_ps(beta2,rsq21);
935 rinv3 = _mm_mul_ps(rinvsq21,rinv21);
936 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
937 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
938 felec = _mm_mul_ps(qq21,felec);
939 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
940 velec = _mm_nmacc_ps(pmecorrV,beta,rinv21);
941 velec = _mm_mul_ps(qq21,velec);
943 /* Update potential sum for this i atom from the interaction with this j atom. */
944 velec = _mm_andnot_ps(dummy_mask,velec);
945 velecsum = _mm_add_ps(velecsum,velec);
949 fscal = _mm_andnot_ps(dummy_mask,fscal);
951 /* Update vectorial force */
952 fix2 = _mm_macc_ps(dx21,fscal,fix2);
953 fiy2 = _mm_macc_ps(dy21,fscal,fiy2);
954 fiz2 = _mm_macc_ps(dz21,fscal,fiz2);
956 fjx1 = _mm_macc_ps(dx21,fscal,fjx1);
957 fjy1 = _mm_macc_ps(dy21,fscal,fjy1);
958 fjz1 = _mm_macc_ps(dz21,fscal,fjz1);
960 /**************************
961 * CALCULATE INTERACTIONS *
962 **************************/
964 r22 = _mm_mul_ps(rsq22,rinv22);
965 r22 = _mm_andnot_ps(dummy_mask,r22);
967 /* EWALD ELECTROSTATICS */
969 /* Analytical PME correction */
970 zeta2 = _mm_mul_ps(beta2,rsq22);
971 rinv3 = _mm_mul_ps(rinvsq22,rinv22);
972 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
973 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
974 felec = _mm_mul_ps(qq22,felec);
975 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
976 velec = _mm_nmacc_ps(pmecorrV,beta,rinv22);
977 velec = _mm_mul_ps(qq22,velec);
979 /* Update potential sum for this i atom from the interaction with this j atom. */
980 velec = _mm_andnot_ps(dummy_mask,velec);
981 velecsum = _mm_add_ps(velecsum,velec);
985 fscal = _mm_andnot_ps(dummy_mask,fscal);
987 /* Update vectorial force */
988 fix2 = _mm_macc_ps(dx22,fscal,fix2);
989 fiy2 = _mm_macc_ps(dy22,fscal,fiy2);
990 fiz2 = _mm_macc_ps(dz22,fscal,fiz2);
992 fjx2 = _mm_macc_ps(dx22,fscal,fjx2);
993 fjy2 = _mm_macc_ps(dy22,fscal,fjy2);
994 fjz2 = _mm_macc_ps(dz22,fscal,fjz2);
996 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
997 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
998 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
999 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
1001 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
1002 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1004 /* Inner loop uses 270 flops */
1007 /* End of innermost loop */
1009 gmx_mm_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1010 f+i_coord_offset,fshift+i_shift_offset);
1013 /* Update potential energies */
1014 gmx_mm_update_1pot_ps(velecsum,kernel_data->energygrp_elec+ggid);
1016 /* Increment number of inner iterations */
1017 inneriter += j_index_end - j_index_start;
1019 /* Outer loop uses 19 flops */
1022 /* Increment number of outer iterations */
1025 /* Update outer/inner flops */
1027 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W3W3_VF,outeriter*19 + inneriter*270);
1030 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwNone_GeomW3W3_F_avx_128_fma_single
1031 * Electrostatics interaction: Ewald
1032 * VdW interaction: None
1033 * Geometry: Water3-Water3
1034 * Calculate force/pot: Force
1037 nb_kernel_ElecEw_VdwNone_GeomW3W3_F_avx_128_fma_single
1038 (t_nblist * gmx_restrict nlist,
1039 rvec * gmx_restrict xx,
1040 rvec * gmx_restrict ff,
1041 t_forcerec * gmx_restrict fr,
1042 t_mdatoms * gmx_restrict mdatoms,
1043 nb_kernel_data_t * gmx_restrict kernel_data,
1044 t_nrnb * gmx_restrict nrnb)
1046 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
1047 * just 0 for non-waters.
1048 * Suffixes A,B,C,D refer to j loop unrolling done with AVX_128, e.g. for the four different
1049 * jnr indices corresponding to data put in the four positions in the SIMD register.
1051 int i_shift_offset,i_coord_offset,outeriter,inneriter;
1052 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1053 int jnrA,jnrB,jnrC,jnrD;
1054 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
1055 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
1056 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
1057 real rcutoff_scalar;
1058 real *shiftvec,*fshift,*x,*f;
1059 real *fjptrA,*fjptrB,*fjptrC,*fjptrD;
1060 real scratch[4*DIM];
1061 __m128 fscal,rcutoff,rcutoff2,jidxall;
1063 __m128 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
1065 __m128 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1067 __m128 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1068 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
1069 __m128 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
1070 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
1071 __m128 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1072 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
1073 __m128 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1074 __m128 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
1075 __m128 dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
1076 __m128 dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
1077 __m128 dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
1078 __m128 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1079 __m128 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1080 __m128 dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
1081 __m128 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1082 __m128 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1083 __m128 velec,felec,velecsum,facel,crf,krf,krf2;
1086 __m128 ewtabscale,eweps,twoeweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
1087 __m128 beta,beta2,beta3,zeta2,pmecorrF,pmecorrV,rinv3;
1089 __m128 dummy_mask,cutoff_mask;
1090 __m128 signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
1091 __m128 one = _mm_set1_ps(1.0);
1092 __m128 two = _mm_set1_ps(2.0);
1098 jindex = nlist->jindex;
1100 shiftidx = nlist->shift;
1102 shiftvec = fr->shift_vec[0];
1103 fshift = fr->fshift[0];
1104 facel = _mm_set1_ps(fr->epsfac);
1105 charge = mdatoms->chargeA;
1107 sh_ewald = _mm_set1_ps(fr->ic->sh_ewald);
1108 beta = _mm_set1_ps(fr->ic->ewaldcoeff);
1109 beta2 = _mm_mul_ps(beta,beta);
1110 beta3 = _mm_mul_ps(beta,beta2);
1111 ewtab = fr->ic->tabq_coul_F;
1112 ewtabscale = _mm_set1_ps(fr->ic->tabq_scale);
1113 ewtabhalfspace = _mm_set1_ps(0.5/fr->ic->tabq_scale);
1115 /* Setup water-specific parameters */
1116 inr = nlist->iinr[0];
1117 iq0 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+0]));
1118 iq1 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
1119 iq2 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
1121 jq0 = _mm_set1_ps(charge[inr+0]);
1122 jq1 = _mm_set1_ps(charge[inr+1]);
1123 jq2 = _mm_set1_ps(charge[inr+2]);
1124 qq00 = _mm_mul_ps(iq0,jq0);
1125 qq01 = _mm_mul_ps(iq0,jq1);
1126 qq02 = _mm_mul_ps(iq0,jq2);
1127 qq10 = _mm_mul_ps(iq1,jq0);
1128 qq11 = _mm_mul_ps(iq1,jq1);
1129 qq12 = _mm_mul_ps(iq1,jq2);
1130 qq20 = _mm_mul_ps(iq2,jq0);
1131 qq21 = _mm_mul_ps(iq2,jq1);
1132 qq22 = _mm_mul_ps(iq2,jq2);
1134 /* Avoid stupid compiler warnings */
1135 jnrA = jnrB = jnrC = jnrD = 0;
1136 j_coord_offsetA = 0;
1137 j_coord_offsetB = 0;
1138 j_coord_offsetC = 0;
1139 j_coord_offsetD = 0;
1144 for(iidx=0;iidx<4*DIM;iidx++)
1146 scratch[iidx] = 0.0;
1149 /* Start outer loop over neighborlists */
1150 for(iidx=0; iidx<nri; iidx++)
1152 /* Load shift vector for this list */
1153 i_shift_offset = DIM*shiftidx[iidx];
1155 /* Load limits for loop over neighbors */
1156 j_index_start = jindex[iidx];
1157 j_index_end = jindex[iidx+1];
1159 /* Get outer coordinate index */
1161 i_coord_offset = DIM*inr;
1163 /* Load i particle coords and add shift vector */
1164 gmx_mm_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset,
1165 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
1167 fix0 = _mm_setzero_ps();
1168 fiy0 = _mm_setzero_ps();
1169 fiz0 = _mm_setzero_ps();
1170 fix1 = _mm_setzero_ps();
1171 fiy1 = _mm_setzero_ps();
1172 fiz1 = _mm_setzero_ps();
1173 fix2 = _mm_setzero_ps();
1174 fiy2 = _mm_setzero_ps();
1175 fiz2 = _mm_setzero_ps();
1177 /* Start inner kernel loop */
1178 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
1181 /* Get j neighbor index, and coordinate index */
1183 jnrB = jjnr[jidx+1];
1184 jnrC = jjnr[jidx+2];
1185 jnrD = jjnr[jidx+3];
1186 j_coord_offsetA = DIM*jnrA;
1187 j_coord_offsetB = DIM*jnrB;
1188 j_coord_offsetC = DIM*jnrC;
1189 j_coord_offsetD = DIM*jnrD;
1191 /* load j atom coordinates */
1192 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1193 x+j_coord_offsetC,x+j_coord_offsetD,
1194 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1196 /* Calculate displacement vector */
1197 dx00 = _mm_sub_ps(ix0,jx0);
1198 dy00 = _mm_sub_ps(iy0,jy0);
1199 dz00 = _mm_sub_ps(iz0,jz0);
1200 dx01 = _mm_sub_ps(ix0,jx1);
1201 dy01 = _mm_sub_ps(iy0,jy1);
1202 dz01 = _mm_sub_ps(iz0,jz1);
1203 dx02 = _mm_sub_ps(ix0,jx2);
1204 dy02 = _mm_sub_ps(iy0,jy2);
1205 dz02 = _mm_sub_ps(iz0,jz2);
1206 dx10 = _mm_sub_ps(ix1,jx0);
1207 dy10 = _mm_sub_ps(iy1,jy0);
1208 dz10 = _mm_sub_ps(iz1,jz0);
1209 dx11 = _mm_sub_ps(ix1,jx1);
1210 dy11 = _mm_sub_ps(iy1,jy1);
1211 dz11 = _mm_sub_ps(iz1,jz1);
1212 dx12 = _mm_sub_ps(ix1,jx2);
1213 dy12 = _mm_sub_ps(iy1,jy2);
1214 dz12 = _mm_sub_ps(iz1,jz2);
1215 dx20 = _mm_sub_ps(ix2,jx0);
1216 dy20 = _mm_sub_ps(iy2,jy0);
1217 dz20 = _mm_sub_ps(iz2,jz0);
1218 dx21 = _mm_sub_ps(ix2,jx1);
1219 dy21 = _mm_sub_ps(iy2,jy1);
1220 dz21 = _mm_sub_ps(iz2,jz1);
1221 dx22 = _mm_sub_ps(ix2,jx2);
1222 dy22 = _mm_sub_ps(iy2,jy2);
1223 dz22 = _mm_sub_ps(iz2,jz2);
1225 /* Calculate squared distance and things based on it */
1226 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
1227 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
1228 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
1229 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
1230 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1231 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1232 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
1233 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1234 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1236 rinv00 = gmx_mm_invsqrt_ps(rsq00);
1237 rinv01 = gmx_mm_invsqrt_ps(rsq01);
1238 rinv02 = gmx_mm_invsqrt_ps(rsq02);
1239 rinv10 = gmx_mm_invsqrt_ps(rsq10);
1240 rinv11 = gmx_mm_invsqrt_ps(rsq11);
1241 rinv12 = gmx_mm_invsqrt_ps(rsq12);
1242 rinv20 = gmx_mm_invsqrt_ps(rsq20);
1243 rinv21 = gmx_mm_invsqrt_ps(rsq21);
1244 rinv22 = gmx_mm_invsqrt_ps(rsq22);
1246 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
1247 rinvsq01 = _mm_mul_ps(rinv01,rinv01);
1248 rinvsq02 = _mm_mul_ps(rinv02,rinv02);
1249 rinvsq10 = _mm_mul_ps(rinv10,rinv10);
1250 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
1251 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
1252 rinvsq20 = _mm_mul_ps(rinv20,rinv20);
1253 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
1254 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
1256 fjx0 = _mm_setzero_ps();
1257 fjy0 = _mm_setzero_ps();
1258 fjz0 = _mm_setzero_ps();
1259 fjx1 = _mm_setzero_ps();
1260 fjy1 = _mm_setzero_ps();
1261 fjz1 = _mm_setzero_ps();
1262 fjx2 = _mm_setzero_ps();
1263 fjy2 = _mm_setzero_ps();
1264 fjz2 = _mm_setzero_ps();
1266 /**************************
1267 * CALCULATE INTERACTIONS *
1268 **************************/
1270 r00 = _mm_mul_ps(rsq00,rinv00);
1272 /* EWALD ELECTROSTATICS */
1274 /* Analytical PME correction */
1275 zeta2 = _mm_mul_ps(beta2,rsq00);
1276 rinv3 = _mm_mul_ps(rinvsq00,rinv00);
1277 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1278 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1279 felec = _mm_mul_ps(qq00,felec);
1283 /* Update vectorial force */
1284 fix0 = _mm_macc_ps(dx00,fscal,fix0);
1285 fiy0 = _mm_macc_ps(dy00,fscal,fiy0);
1286 fiz0 = _mm_macc_ps(dz00,fscal,fiz0);
1288 fjx0 = _mm_macc_ps(dx00,fscal,fjx0);
1289 fjy0 = _mm_macc_ps(dy00,fscal,fjy0);
1290 fjz0 = _mm_macc_ps(dz00,fscal,fjz0);
1292 /**************************
1293 * CALCULATE INTERACTIONS *
1294 **************************/
1296 r01 = _mm_mul_ps(rsq01,rinv01);
1298 /* EWALD ELECTROSTATICS */
1300 /* Analytical PME correction */
1301 zeta2 = _mm_mul_ps(beta2,rsq01);
1302 rinv3 = _mm_mul_ps(rinvsq01,rinv01);
1303 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1304 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1305 felec = _mm_mul_ps(qq01,felec);
1309 /* Update vectorial force */
1310 fix0 = _mm_macc_ps(dx01,fscal,fix0);
1311 fiy0 = _mm_macc_ps(dy01,fscal,fiy0);
1312 fiz0 = _mm_macc_ps(dz01,fscal,fiz0);
1314 fjx1 = _mm_macc_ps(dx01,fscal,fjx1);
1315 fjy1 = _mm_macc_ps(dy01,fscal,fjy1);
1316 fjz1 = _mm_macc_ps(dz01,fscal,fjz1);
1318 /**************************
1319 * CALCULATE INTERACTIONS *
1320 **************************/
1322 r02 = _mm_mul_ps(rsq02,rinv02);
1324 /* EWALD ELECTROSTATICS */
1326 /* Analytical PME correction */
1327 zeta2 = _mm_mul_ps(beta2,rsq02);
1328 rinv3 = _mm_mul_ps(rinvsq02,rinv02);
1329 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1330 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1331 felec = _mm_mul_ps(qq02,felec);
1335 /* Update vectorial force */
1336 fix0 = _mm_macc_ps(dx02,fscal,fix0);
1337 fiy0 = _mm_macc_ps(dy02,fscal,fiy0);
1338 fiz0 = _mm_macc_ps(dz02,fscal,fiz0);
1340 fjx2 = _mm_macc_ps(dx02,fscal,fjx2);
1341 fjy2 = _mm_macc_ps(dy02,fscal,fjy2);
1342 fjz2 = _mm_macc_ps(dz02,fscal,fjz2);
1344 /**************************
1345 * CALCULATE INTERACTIONS *
1346 **************************/
1348 r10 = _mm_mul_ps(rsq10,rinv10);
1350 /* EWALD ELECTROSTATICS */
1352 /* Analytical PME correction */
1353 zeta2 = _mm_mul_ps(beta2,rsq10);
1354 rinv3 = _mm_mul_ps(rinvsq10,rinv10);
1355 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1356 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1357 felec = _mm_mul_ps(qq10,felec);
1361 /* Update vectorial force */
1362 fix1 = _mm_macc_ps(dx10,fscal,fix1);
1363 fiy1 = _mm_macc_ps(dy10,fscal,fiy1);
1364 fiz1 = _mm_macc_ps(dz10,fscal,fiz1);
1366 fjx0 = _mm_macc_ps(dx10,fscal,fjx0);
1367 fjy0 = _mm_macc_ps(dy10,fscal,fjy0);
1368 fjz0 = _mm_macc_ps(dz10,fscal,fjz0);
1370 /**************************
1371 * CALCULATE INTERACTIONS *
1372 **************************/
1374 r11 = _mm_mul_ps(rsq11,rinv11);
1376 /* EWALD ELECTROSTATICS */
1378 /* Analytical PME correction */
1379 zeta2 = _mm_mul_ps(beta2,rsq11);
1380 rinv3 = _mm_mul_ps(rinvsq11,rinv11);
1381 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1382 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1383 felec = _mm_mul_ps(qq11,felec);
1387 /* Update vectorial force */
1388 fix1 = _mm_macc_ps(dx11,fscal,fix1);
1389 fiy1 = _mm_macc_ps(dy11,fscal,fiy1);
1390 fiz1 = _mm_macc_ps(dz11,fscal,fiz1);
1392 fjx1 = _mm_macc_ps(dx11,fscal,fjx1);
1393 fjy1 = _mm_macc_ps(dy11,fscal,fjy1);
1394 fjz1 = _mm_macc_ps(dz11,fscal,fjz1);
1396 /**************************
1397 * CALCULATE INTERACTIONS *
1398 **************************/
1400 r12 = _mm_mul_ps(rsq12,rinv12);
1402 /* EWALD ELECTROSTATICS */
1404 /* Analytical PME correction */
1405 zeta2 = _mm_mul_ps(beta2,rsq12);
1406 rinv3 = _mm_mul_ps(rinvsq12,rinv12);
1407 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1408 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1409 felec = _mm_mul_ps(qq12,felec);
1413 /* Update vectorial force */
1414 fix1 = _mm_macc_ps(dx12,fscal,fix1);
1415 fiy1 = _mm_macc_ps(dy12,fscal,fiy1);
1416 fiz1 = _mm_macc_ps(dz12,fscal,fiz1);
1418 fjx2 = _mm_macc_ps(dx12,fscal,fjx2);
1419 fjy2 = _mm_macc_ps(dy12,fscal,fjy2);
1420 fjz2 = _mm_macc_ps(dz12,fscal,fjz2);
1422 /**************************
1423 * CALCULATE INTERACTIONS *
1424 **************************/
1426 r20 = _mm_mul_ps(rsq20,rinv20);
1428 /* EWALD ELECTROSTATICS */
1430 /* Analytical PME correction */
1431 zeta2 = _mm_mul_ps(beta2,rsq20);
1432 rinv3 = _mm_mul_ps(rinvsq20,rinv20);
1433 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1434 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1435 felec = _mm_mul_ps(qq20,felec);
1439 /* Update vectorial force */
1440 fix2 = _mm_macc_ps(dx20,fscal,fix2);
1441 fiy2 = _mm_macc_ps(dy20,fscal,fiy2);
1442 fiz2 = _mm_macc_ps(dz20,fscal,fiz2);
1444 fjx0 = _mm_macc_ps(dx20,fscal,fjx0);
1445 fjy0 = _mm_macc_ps(dy20,fscal,fjy0);
1446 fjz0 = _mm_macc_ps(dz20,fscal,fjz0);
1448 /**************************
1449 * CALCULATE INTERACTIONS *
1450 **************************/
1452 r21 = _mm_mul_ps(rsq21,rinv21);
1454 /* EWALD ELECTROSTATICS */
1456 /* Analytical PME correction */
1457 zeta2 = _mm_mul_ps(beta2,rsq21);
1458 rinv3 = _mm_mul_ps(rinvsq21,rinv21);
1459 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1460 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1461 felec = _mm_mul_ps(qq21,felec);
1465 /* Update vectorial force */
1466 fix2 = _mm_macc_ps(dx21,fscal,fix2);
1467 fiy2 = _mm_macc_ps(dy21,fscal,fiy2);
1468 fiz2 = _mm_macc_ps(dz21,fscal,fiz2);
1470 fjx1 = _mm_macc_ps(dx21,fscal,fjx1);
1471 fjy1 = _mm_macc_ps(dy21,fscal,fjy1);
1472 fjz1 = _mm_macc_ps(dz21,fscal,fjz1);
1474 /**************************
1475 * CALCULATE INTERACTIONS *
1476 **************************/
1478 r22 = _mm_mul_ps(rsq22,rinv22);
1480 /* EWALD ELECTROSTATICS */
1482 /* Analytical PME correction */
1483 zeta2 = _mm_mul_ps(beta2,rsq22);
1484 rinv3 = _mm_mul_ps(rinvsq22,rinv22);
1485 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1486 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1487 felec = _mm_mul_ps(qq22,felec);
1491 /* Update vectorial force */
1492 fix2 = _mm_macc_ps(dx22,fscal,fix2);
1493 fiy2 = _mm_macc_ps(dy22,fscal,fiy2);
1494 fiz2 = _mm_macc_ps(dz22,fscal,fiz2);
1496 fjx2 = _mm_macc_ps(dx22,fscal,fjx2);
1497 fjy2 = _mm_macc_ps(dy22,fscal,fjy2);
1498 fjz2 = _mm_macc_ps(dz22,fscal,fjz2);
1500 fjptrA = f+j_coord_offsetA;
1501 fjptrB = f+j_coord_offsetB;
1502 fjptrC = f+j_coord_offsetC;
1503 fjptrD = f+j_coord_offsetD;
1505 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
1506 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1508 /* Inner loop uses 252 flops */
1511 if(jidx<j_index_end)
1514 /* Get j neighbor index, and coordinate index */
1515 jnrlistA = jjnr[jidx];
1516 jnrlistB = jjnr[jidx+1];
1517 jnrlistC = jjnr[jidx+2];
1518 jnrlistD = jjnr[jidx+3];
1519 /* Sign of each element will be negative for non-real atoms.
1520 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
1521 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
1523 dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
1524 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
1525 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
1526 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
1527 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
1528 j_coord_offsetA = DIM*jnrA;
1529 j_coord_offsetB = DIM*jnrB;
1530 j_coord_offsetC = DIM*jnrC;
1531 j_coord_offsetD = DIM*jnrD;
1533 /* load j atom coordinates */
1534 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1535 x+j_coord_offsetC,x+j_coord_offsetD,
1536 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1538 /* Calculate displacement vector */
1539 dx00 = _mm_sub_ps(ix0,jx0);
1540 dy00 = _mm_sub_ps(iy0,jy0);
1541 dz00 = _mm_sub_ps(iz0,jz0);
1542 dx01 = _mm_sub_ps(ix0,jx1);
1543 dy01 = _mm_sub_ps(iy0,jy1);
1544 dz01 = _mm_sub_ps(iz0,jz1);
1545 dx02 = _mm_sub_ps(ix0,jx2);
1546 dy02 = _mm_sub_ps(iy0,jy2);
1547 dz02 = _mm_sub_ps(iz0,jz2);
1548 dx10 = _mm_sub_ps(ix1,jx0);
1549 dy10 = _mm_sub_ps(iy1,jy0);
1550 dz10 = _mm_sub_ps(iz1,jz0);
1551 dx11 = _mm_sub_ps(ix1,jx1);
1552 dy11 = _mm_sub_ps(iy1,jy1);
1553 dz11 = _mm_sub_ps(iz1,jz1);
1554 dx12 = _mm_sub_ps(ix1,jx2);
1555 dy12 = _mm_sub_ps(iy1,jy2);
1556 dz12 = _mm_sub_ps(iz1,jz2);
1557 dx20 = _mm_sub_ps(ix2,jx0);
1558 dy20 = _mm_sub_ps(iy2,jy0);
1559 dz20 = _mm_sub_ps(iz2,jz0);
1560 dx21 = _mm_sub_ps(ix2,jx1);
1561 dy21 = _mm_sub_ps(iy2,jy1);
1562 dz21 = _mm_sub_ps(iz2,jz1);
1563 dx22 = _mm_sub_ps(ix2,jx2);
1564 dy22 = _mm_sub_ps(iy2,jy2);
1565 dz22 = _mm_sub_ps(iz2,jz2);
1567 /* Calculate squared distance and things based on it */
1568 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
1569 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
1570 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
1571 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
1572 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1573 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1574 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
1575 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1576 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1578 rinv00 = gmx_mm_invsqrt_ps(rsq00);
1579 rinv01 = gmx_mm_invsqrt_ps(rsq01);
1580 rinv02 = gmx_mm_invsqrt_ps(rsq02);
1581 rinv10 = gmx_mm_invsqrt_ps(rsq10);
1582 rinv11 = gmx_mm_invsqrt_ps(rsq11);
1583 rinv12 = gmx_mm_invsqrt_ps(rsq12);
1584 rinv20 = gmx_mm_invsqrt_ps(rsq20);
1585 rinv21 = gmx_mm_invsqrt_ps(rsq21);
1586 rinv22 = gmx_mm_invsqrt_ps(rsq22);
1588 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
1589 rinvsq01 = _mm_mul_ps(rinv01,rinv01);
1590 rinvsq02 = _mm_mul_ps(rinv02,rinv02);
1591 rinvsq10 = _mm_mul_ps(rinv10,rinv10);
1592 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
1593 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
1594 rinvsq20 = _mm_mul_ps(rinv20,rinv20);
1595 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
1596 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
1598 fjx0 = _mm_setzero_ps();
1599 fjy0 = _mm_setzero_ps();
1600 fjz0 = _mm_setzero_ps();
1601 fjx1 = _mm_setzero_ps();
1602 fjy1 = _mm_setzero_ps();
1603 fjz1 = _mm_setzero_ps();
1604 fjx2 = _mm_setzero_ps();
1605 fjy2 = _mm_setzero_ps();
1606 fjz2 = _mm_setzero_ps();
1608 /**************************
1609 * CALCULATE INTERACTIONS *
1610 **************************/
1612 r00 = _mm_mul_ps(rsq00,rinv00);
1613 r00 = _mm_andnot_ps(dummy_mask,r00);
1615 /* EWALD ELECTROSTATICS */
1617 /* Analytical PME correction */
1618 zeta2 = _mm_mul_ps(beta2,rsq00);
1619 rinv3 = _mm_mul_ps(rinvsq00,rinv00);
1620 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1621 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1622 felec = _mm_mul_ps(qq00,felec);
1626 fscal = _mm_andnot_ps(dummy_mask,fscal);
1628 /* Update vectorial force */
1629 fix0 = _mm_macc_ps(dx00,fscal,fix0);
1630 fiy0 = _mm_macc_ps(dy00,fscal,fiy0);
1631 fiz0 = _mm_macc_ps(dz00,fscal,fiz0);
1633 fjx0 = _mm_macc_ps(dx00,fscal,fjx0);
1634 fjy0 = _mm_macc_ps(dy00,fscal,fjy0);
1635 fjz0 = _mm_macc_ps(dz00,fscal,fjz0);
1637 /**************************
1638 * CALCULATE INTERACTIONS *
1639 **************************/
1641 r01 = _mm_mul_ps(rsq01,rinv01);
1642 r01 = _mm_andnot_ps(dummy_mask,r01);
1644 /* EWALD ELECTROSTATICS */
1646 /* Analytical PME correction */
1647 zeta2 = _mm_mul_ps(beta2,rsq01);
1648 rinv3 = _mm_mul_ps(rinvsq01,rinv01);
1649 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1650 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1651 felec = _mm_mul_ps(qq01,felec);
1655 fscal = _mm_andnot_ps(dummy_mask,fscal);
1657 /* Update vectorial force */
1658 fix0 = _mm_macc_ps(dx01,fscal,fix0);
1659 fiy0 = _mm_macc_ps(dy01,fscal,fiy0);
1660 fiz0 = _mm_macc_ps(dz01,fscal,fiz0);
1662 fjx1 = _mm_macc_ps(dx01,fscal,fjx1);
1663 fjy1 = _mm_macc_ps(dy01,fscal,fjy1);
1664 fjz1 = _mm_macc_ps(dz01,fscal,fjz1);
1666 /**************************
1667 * CALCULATE INTERACTIONS *
1668 **************************/
1670 r02 = _mm_mul_ps(rsq02,rinv02);
1671 r02 = _mm_andnot_ps(dummy_mask,r02);
1673 /* EWALD ELECTROSTATICS */
1675 /* Analytical PME correction */
1676 zeta2 = _mm_mul_ps(beta2,rsq02);
1677 rinv3 = _mm_mul_ps(rinvsq02,rinv02);
1678 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1679 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1680 felec = _mm_mul_ps(qq02,felec);
1684 fscal = _mm_andnot_ps(dummy_mask,fscal);
1686 /* Update vectorial force */
1687 fix0 = _mm_macc_ps(dx02,fscal,fix0);
1688 fiy0 = _mm_macc_ps(dy02,fscal,fiy0);
1689 fiz0 = _mm_macc_ps(dz02,fscal,fiz0);
1691 fjx2 = _mm_macc_ps(dx02,fscal,fjx2);
1692 fjy2 = _mm_macc_ps(dy02,fscal,fjy2);
1693 fjz2 = _mm_macc_ps(dz02,fscal,fjz2);
1695 /**************************
1696 * CALCULATE INTERACTIONS *
1697 **************************/
1699 r10 = _mm_mul_ps(rsq10,rinv10);
1700 r10 = _mm_andnot_ps(dummy_mask,r10);
1702 /* EWALD ELECTROSTATICS */
1704 /* Analytical PME correction */
1705 zeta2 = _mm_mul_ps(beta2,rsq10);
1706 rinv3 = _mm_mul_ps(rinvsq10,rinv10);
1707 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1708 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1709 felec = _mm_mul_ps(qq10,felec);
1713 fscal = _mm_andnot_ps(dummy_mask,fscal);
1715 /* Update vectorial force */
1716 fix1 = _mm_macc_ps(dx10,fscal,fix1);
1717 fiy1 = _mm_macc_ps(dy10,fscal,fiy1);
1718 fiz1 = _mm_macc_ps(dz10,fscal,fiz1);
1720 fjx0 = _mm_macc_ps(dx10,fscal,fjx0);
1721 fjy0 = _mm_macc_ps(dy10,fscal,fjy0);
1722 fjz0 = _mm_macc_ps(dz10,fscal,fjz0);
1724 /**************************
1725 * CALCULATE INTERACTIONS *
1726 **************************/
1728 r11 = _mm_mul_ps(rsq11,rinv11);
1729 r11 = _mm_andnot_ps(dummy_mask,r11);
1731 /* EWALD ELECTROSTATICS */
1733 /* Analytical PME correction */
1734 zeta2 = _mm_mul_ps(beta2,rsq11);
1735 rinv3 = _mm_mul_ps(rinvsq11,rinv11);
1736 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1737 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1738 felec = _mm_mul_ps(qq11,felec);
1742 fscal = _mm_andnot_ps(dummy_mask,fscal);
1744 /* Update vectorial force */
1745 fix1 = _mm_macc_ps(dx11,fscal,fix1);
1746 fiy1 = _mm_macc_ps(dy11,fscal,fiy1);
1747 fiz1 = _mm_macc_ps(dz11,fscal,fiz1);
1749 fjx1 = _mm_macc_ps(dx11,fscal,fjx1);
1750 fjy1 = _mm_macc_ps(dy11,fscal,fjy1);
1751 fjz1 = _mm_macc_ps(dz11,fscal,fjz1);
1753 /**************************
1754 * CALCULATE INTERACTIONS *
1755 **************************/
1757 r12 = _mm_mul_ps(rsq12,rinv12);
1758 r12 = _mm_andnot_ps(dummy_mask,r12);
1760 /* EWALD ELECTROSTATICS */
1762 /* Analytical PME correction */
1763 zeta2 = _mm_mul_ps(beta2,rsq12);
1764 rinv3 = _mm_mul_ps(rinvsq12,rinv12);
1765 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1766 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1767 felec = _mm_mul_ps(qq12,felec);
1771 fscal = _mm_andnot_ps(dummy_mask,fscal);
1773 /* Update vectorial force */
1774 fix1 = _mm_macc_ps(dx12,fscal,fix1);
1775 fiy1 = _mm_macc_ps(dy12,fscal,fiy1);
1776 fiz1 = _mm_macc_ps(dz12,fscal,fiz1);
1778 fjx2 = _mm_macc_ps(dx12,fscal,fjx2);
1779 fjy2 = _mm_macc_ps(dy12,fscal,fjy2);
1780 fjz2 = _mm_macc_ps(dz12,fscal,fjz2);
1782 /**************************
1783 * CALCULATE INTERACTIONS *
1784 **************************/
1786 r20 = _mm_mul_ps(rsq20,rinv20);
1787 r20 = _mm_andnot_ps(dummy_mask,r20);
1789 /* EWALD ELECTROSTATICS */
1791 /* Analytical PME correction */
1792 zeta2 = _mm_mul_ps(beta2,rsq20);
1793 rinv3 = _mm_mul_ps(rinvsq20,rinv20);
1794 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1795 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1796 felec = _mm_mul_ps(qq20,felec);
1800 fscal = _mm_andnot_ps(dummy_mask,fscal);
1802 /* Update vectorial force */
1803 fix2 = _mm_macc_ps(dx20,fscal,fix2);
1804 fiy2 = _mm_macc_ps(dy20,fscal,fiy2);
1805 fiz2 = _mm_macc_ps(dz20,fscal,fiz2);
1807 fjx0 = _mm_macc_ps(dx20,fscal,fjx0);
1808 fjy0 = _mm_macc_ps(dy20,fscal,fjy0);
1809 fjz0 = _mm_macc_ps(dz20,fscal,fjz0);
1811 /**************************
1812 * CALCULATE INTERACTIONS *
1813 **************************/
1815 r21 = _mm_mul_ps(rsq21,rinv21);
1816 r21 = _mm_andnot_ps(dummy_mask,r21);
1818 /* EWALD ELECTROSTATICS */
1820 /* Analytical PME correction */
1821 zeta2 = _mm_mul_ps(beta2,rsq21);
1822 rinv3 = _mm_mul_ps(rinvsq21,rinv21);
1823 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1824 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1825 felec = _mm_mul_ps(qq21,felec);
1829 fscal = _mm_andnot_ps(dummy_mask,fscal);
1831 /* Update vectorial force */
1832 fix2 = _mm_macc_ps(dx21,fscal,fix2);
1833 fiy2 = _mm_macc_ps(dy21,fscal,fiy2);
1834 fiz2 = _mm_macc_ps(dz21,fscal,fiz2);
1836 fjx1 = _mm_macc_ps(dx21,fscal,fjx1);
1837 fjy1 = _mm_macc_ps(dy21,fscal,fjy1);
1838 fjz1 = _mm_macc_ps(dz21,fscal,fjz1);
1840 /**************************
1841 * CALCULATE INTERACTIONS *
1842 **************************/
1844 r22 = _mm_mul_ps(rsq22,rinv22);
1845 r22 = _mm_andnot_ps(dummy_mask,r22);
1847 /* EWALD ELECTROSTATICS */
1849 /* Analytical PME correction */
1850 zeta2 = _mm_mul_ps(beta2,rsq22);
1851 rinv3 = _mm_mul_ps(rinvsq22,rinv22);
1852 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1853 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1854 felec = _mm_mul_ps(qq22,felec);
1858 fscal = _mm_andnot_ps(dummy_mask,fscal);
1860 /* Update vectorial force */
1861 fix2 = _mm_macc_ps(dx22,fscal,fix2);
1862 fiy2 = _mm_macc_ps(dy22,fscal,fiy2);
1863 fiz2 = _mm_macc_ps(dz22,fscal,fiz2);
1865 fjx2 = _mm_macc_ps(dx22,fscal,fjx2);
1866 fjy2 = _mm_macc_ps(dy22,fscal,fjy2);
1867 fjz2 = _mm_macc_ps(dz22,fscal,fjz2);
1869 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
1870 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
1871 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
1872 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
1874 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
1875 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1877 /* Inner loop uses 261 flops */
1880 /* End of innermost loop */
1882 gmx_mm_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1883 f+i_coord_offset,fshift+i_shift_offset);
1885 /* Increment number of inner iterations */
1886 inneriter += j_index_end - j_index_start;
1888 /* Outer loop uses 18 flops */
1891 /* Increment number of outer iterations */
1894 /* Update outer/inner flops */
1896 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W3W3_F,outeriter*18 + inneriter*261);