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36 * Note: this file was generated by the GROMACS avx_128_fma_single kernel generator.
42 #include "../nb_kernel.h"
43 #include "gromacs/legacyheaders/types/simple.h"
44 #include "gromacs/math/vec.h"
45 #include "gromacs/legacyheaders/nrnb.h"
47 #include "gromacs/simd/math_x86_avx_128_fma_single.h"
48 #include "kernelutil_x86_avx_128_fma_single.h"
51 * Gromacs nonbonded kernel: nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3W3_VF_avx_128_fma_single
52 * Electrostatics interaction: Ewald
53 * VdW interaction: LJEwald
54 * Geometry: Water3-Water3
55 * Calculate force/pot: PotentialAndForce
58 nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3W3_VF_avx_128_fma_single
59 (t_nblist * gmx_restrict nlist,
60 rvec * gmx_restrict xx,
61 rvec * gmx_restrict ff,
62 t_forcerec * gmx_restrict fr,
63 t_mdatoms * gmx_restrict mdatoms,
64 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
65 t_nrnb * gmx_restrict nrnb)
67 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
68 * just 0 for non-waters.
69 * Suffixes A,B,C,D refer to j loop unrolling done with AVX_128, e.g. for the four different
70 * jnr indices corresponding to data put in the four positions in the SIMD register.
72 int i_shift_offset,i_coord_offset,outeriter,inneriter;
73 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
74 int jnrA,jnrB,jnrC,jnrD;
75 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
76 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
77 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
79 real *shiftvec,*fshift,*x,*f;
80 real *fjptrA,*fjptrB,*fjptrC,*fjptrD;
82 __m128 fscal,rcutoff,rcutoff2,jidxall;
84 __m128 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
86 __m128 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
88 __m128 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
89 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
90 __m128 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
91 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
92 __m128 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
93 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
94 __m128 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
95 __m128 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
96 __m128 dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
97 __m128 dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
98 __m128 dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
99 __m128 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
100 __m128 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
101 __m128 dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
102 __m128 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
103 __m128 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
104 __m128 velec,felec,velecsum,facel,crf,krf,krf2;
107 __m128 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
110 __m128 one_sixth = _mm_set1_ps(1.0/6.0);
111 __m128 one_twelfth = _mm_set1_ps(1.0/12.0);
122 __m128 ewclj,ewclj2,ewclj6,ewcljrsq,poly,exponent,f6A,f6B,sh_lj_ewald;
123 __m128 one_half = _mm_set1_ps(0.5);
124 __m128 minus_one = _mm_set1_ps(-1.0);
126 __m128 ewtabscale,eweps,twoeweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
127 __m128 beta,beta2,beta3,zeta2,pmecorrF,pmecorrV,rinv3;
129 __m128 dummy_mask,cutoff_mask;
130 __m128 signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
131 __m128 one = _mm_set1_ps(1.0);
132 __m128 two = _mm_set1_ps(2.0);
138 jindex = nlist->jindex;
140 shiftidx = nlist->shift;
142 shiftvec = fr->shift_vec[0];
143 fshift = fr->fshift[0];
144 facel = _mm_set1_ps(fr->epsfac);
145 charge = mdatoms->chargeA;
146 nvdwtype = fr->ntype;
148 vdwtype = mdatoms->typeA;
149 vdwgridparam = fr->ljpme_c6grid;
150 sh_lj_ewald = _mm_set1_ps(fr->ic->sh_lj_ewald);
151 ewclj = _mm_set1_ps(fr->ewaldcoeff_lj);
152 ewclj2 = _mm_mul_ps(minus_one,_mm_mul_ps(ewclj,ewclj));
154 sh_ewald = _mm_set1_ps(fr->ic->sh_ewald);
155 beta = _mm_set1_ps(fr->ic->ewaldcoeff_q);
156 beta2 = _mm_mul_ps(beta,beta);
157 beta3 = _mm_mul_ps(beta,beta2);
158 ewtab = fr->ic->tabq_coul_FDV0;
159 ewtabscale = _mm_set1_ps(fr->ic->tabq_scale);
160 ewtabhalfspace = _mm_set1_ps(0.5/fr->ic->tabq_scale);
162 /* Setup water-specific parameters */
163 inr = nlist->iinr[0];
164 iq0 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+0]));
165 iq1 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
166 iq2 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
167 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
169 jq0 = _mm_set1_ps(charge[inr+0]);
170 jq1 = _mm_set1_ps(charge[inr+1]);
171 jq2 = _mm_set1_ps(charge[inr+2]);
172 vdwjidx0A = 2*vdwtype[inr+0];
173 qq00 = _mm_mul_ps(iq0,jq0);
174 c6_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A]);
175 c12_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A+1]);
176 c6grid_00 = _mm_set1_ps(vdwgridparam[vdwioffset0+vdwjidx0A]);
177 qq01 = _mm_mul_ps(iq0,jq1);
178 qq02 = _mm_mul_ps(iq0,jq2);
179 qq10 = _mm_mul_ps(iq1,jq0);
180 qq11 = _mm_mul_ps(iq1,jq1);
181 qq12 = _mm_mul_ps(iq1,jq2);
182 qq20 = _mm_mul_ps(iq2,jq0);
183 qq21 = _mm_mul_ps(iq2,jq1);
184 qq22 = _mm_mul_ps(iq2,jq2);
186 /* When we use explicit cutoffs the value must be identical for elec and VdW, so use elec as an arbitrary choice */
187 rcutoff_scalar = fr->rcoulomb;
188 rcutoff = _mm_set1_ps(rcutoff_scalar);
189 rcutoff2 = _mm_mul_ps(rcutoff,rcutoff);
191 sh_vdw_invrcut6 = _mm_set1_ps(fr->ic->sh_invrc6);
192 rvdw = _mm_set1_ps(fr->rvdw);
194 /* Avoid stupid compiler warnings */
195 jnrA = jnrB = jnrC = jnrD = 0;
204 for(iidx=0;iidx<4*DIM;iidx++)
209 /* Start outer loop over neighborlists */
210 for(iidx=0; iidx<nri; iidx++)
212 /* Load shift vector for this list */
213 i_shift_offset = DIM*shiftidx[iidx];
215 /* Load limits for loop over neighbors */
216 j_index_start = jindex[iidx];
217 j_index_end = jindex[iidx+1];
219 /* Get outer coordinate index */
221 i_coord_offset = DIM*inr;
223 /* Load i particle coords and add shift vector */
224 gmx_mm_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset,
225 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
227 fix0 = _mm_setzero_ps();
228 fiy0 = _mm_setzero_ps();
229 fiz0 = _mm_setzero_ps();
230 fix1 = _mm_setzero_ps();
231 fiy1 = _mm_setzero_ps();
232 fiz1 = _mm_setzero_ps();
233 fix2 = _mm_setzero_ps();
234 fiy2 = _mm_setzero_ps();
235 fiz2 = _mm_setzero_ps();
237 /* Reset potential sums */
238 velecsum = _mm_setzero_ps();
239 vvdwsum = _mm_setzero_ps();
241 /* Start inner kernel loop */
242 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
245 /* Get j neighbor index, and coordinate index */
250 j_coord_offsetA = DIM*jnrA;
251 j_coord_offsetB = DIM*jnrB;
252 j_coord_offsetC = DIM*jnrC;
253 j_coord_offsetD = DIM*jnrD;
255 /* load j atom coordinates */
256 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
257 x+j_coord_offsetC,x+j_coord_offsetD,
258 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
260 /* Calculate displacement vector */
261 dx00 = _mm_sub_ps(ix0,jx0);
262 dy00 = _mm_sub_ps(iy0,jy0);
263 dz00 = _mm_sub_ps(iz0,jz0);
264 dx01 = _mm_sub_ps(ix0,jx1);
265 dy01 = _mm_sub_ps(iy0,jy1);
266 dz01 = _mm_sub_ps(iz0,jz1);
267 dx02 = _mm_sub_ps(ix0,jx2);
268 dy02 = _mm_sub_ps(iy0,jy2);
269 dz02 = _mm_sub_ps(iz0,jz2);
270 dx10 = _mm_sub_ps(ix1,jx0);
271 dy10 = _mm_sub_ps(iy1,jy0);
272 dz10 = _mm_sub_ps(iz1,jz0);
273 dx11 = _mm_sub_ps(ix1,jx1);
274 dy11 = _mm_sub_ps(iy1,jy1);
275 dz11 = _mm_sub_ps(iz1,jz1);
276 dx12 = _mm_sub_ps(ix1,jx2);
277 dy12 = _mm_sub_ps(iy1,jy2);
278 dz12 = _mm_sub_ps(iz1,jz2);
279 dx20 = _mm_sub_ps(ix2,jx0);
280 dy20 = _mm_sub_ps(iy2,jy0);
281 dz20 = _mm_sub_ps(iz2,jz0);
282 dx21 = _mm_sub_ps(ix2,jx1);
283 dy21 = _mm_sub_ps(iy2,jy1);
284 dz21 = _mm_sub_ps(iz2,jz1);
285 dx22 = _mm_sub_ps(ix2,jx2);
286 dy22 = _mm_sub_ps(iy2,jy2);
287 dz22 = _mm_sub_ps(iz2,jz2);
289 /* Calculate squared distance and things based on it */
290 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
291 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
292 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
293 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
294 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
295 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
296 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
297 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
298 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
300 rinv00 = gmx_mm_invsqrt_ps(rsq00);
301 rinv01 = gmx_mm_invsqrt_ps(rsq01);
302 rinv02 = gmx_mm_invsqrt_ps(rsq02);
303 rinv10 = gmx_mm_invsqrt_ps(rsq10);
304 rinv11 = gmx_mm_invsqrt_ps(rsq11);
305 rinv12 = gmx_mm_invsqrt_ps(rsq12);
306 rinv20 = gmx_mm_invsqrt_ps(rsq20);
307 rinv21 = gmx_mm_invsqrt_ps(rsq21);
308 rinv22 = gmx_mm_invsqrt_ps(rsq22);
310 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
311 rinvsq01 = _mm_mul_ps(rinv01,rinv01);
312 rinvsq02 = _mm_mul_ps(rinv02,rinv02);
313 rinvsq10 = _mm_mul_ps(rinv10,rinv10);
314 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
315 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
316 rinvsq20 = _mm_mul_ps(rinv20,rinv20);
317 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
318 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
320 fjx0 = _mm_setzero_ps();
321 fjy0 = _mm_setzero_ps();
322 fjz0 = _mm_setzero_ps();
323 fjx1 = _mm_setzero_ps();
324 fjy1 = _mm_setzero_ps();
325 fjz1 = _mm_setzero_ps();
326 fjx2 = _mm_setzero_ps();
327 fjy2 = _mm_setzero_ps();
328 fjz2 = _mm_setzero_ps();
330 /**************************
331 * CALCULATE INTERACTIONS *
332 **************************/
334 if (gmx_mm_any_lt(rsq00,rcutoff2))
337 r00 = _mm_mul_ps(rsq00,rinv00);
339 /* EWALD ELECTROSTATICS */
341 /* Analytical PME correction */
342 zeta2 = _mm_mul_ps(beta2,rsq00);
343 rinv3 = _mm_mul_ps(rinvsq00,rinv00);
344 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
345 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
346 felec = _mm_mul_ps(qq00,felec);
347 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
348 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv00,sh_ewald));
349 velec = _mm_mul_ps(qq00,velec);
351 /* Analytical LJ-PME */
352 rinvsix = _mm_mul_ps(_mm_mul_ps(rinvsq00,rinvsq00),rinvsq00);
353 ewcljrsq = _mm_mul_ps(ewclj2,rsq00);
354 ewclj6 = _mm_mul_ps(ewclj2,_mm_mul_ps(ewclj2,ewclj2));
355 exponent = gmx_simd_exp_r(ewcljrsq);
356 /* poly = exp(-(beta*r)^2) * (1 + (beta*r)^2 + (beta*r)^4 /2) */
357 poly = _mm_mul_ps(exponent,_mm_macc_ps(_mm_mul_ps(ewcljrsq,ewcljrsq),one_half,_mm_sub_ps(one,ewcljrsq)));
358 /* vvdw6 = [C6 - C6grid * (1-poly)]/r6 */
359 vvdw6 = _mm_mul_ps(_mm_macc_ps(-c6grid_00,_mm_sub_ps(one,poly),c6_00),rinvsix);
360 vvdw12 = _mm_mul_ps(c12_00,_mm_mul_ps(rinvsix,rinvsix));
361 vvdw = _mm_msub_ps(_mm_nmacc_ps(c12_00,_mm_mul_ps(sh_vdw_invrcut6,sh_vdw_invrcut6),vvdw12),one_twelfth,
362 _mm_mul_ps(_mm_sub_ps(vvdw6,_mm_macc_ps(c6grid_00,sh_lj_ewald,_mm_mul_ps(c6_00,sh_vdw_invrcut6))),one_sixth));
363 /* fvdw = vvdw12/r - (vvdw6/r + (C6grid * exponent * beta^6)/r) */
364 fvdw = _mm_mul_ps(_mm_add_ps(vvdw12,_mm_msub_ps(_mm_mul_ps(c6grid_00,one_sixth),_mm_mul_ps(exponent,ewclj6),vvdw6)),rinvsq00);
366 cutoff_mask = _mm_cmplt_ps(rsq00,rcutoff2);
368 /* Update potential sum for this i atom from the interaction with this j atom. */
369 velec = _mm_and_ps(velec,cutoff_mask);
370 velecsum = _mm_add_ps(velecsum,velec);
371 vvdw = _mm_and_ps(vvdw,cutoff_mask);
372 vvdwsum = _mm_add_ps(vvdwsum,vvdw);
374 fscal = _mm_add_ps(felec,fvdw);
376 fscal = _mm_and_ps(fscal,cutoff_mask);
378 /* Update vectorial force */
379 fix0 = _mm_macc_ps(dx00,fscal,fix0);
380 fiy0 = _mm_macc_ps(dy00,fscal,fiy0);
381 fiz0 = _mm_macc_ps(dz00,fscal,fiz0);
383 fjx0 = _mm_macc_ps(dx00,fscal,fjx0);
384 fjy0 = _mm_macc_ps(dy00,fscal,fjy0);
385 fjz0 = _mm_macc_ps(dz00,fscal,fjz0);
389 /**************************
390 * CALCULATE INTERACTIONS *
391 **************************/
393 if (gmx_mm_any_lt(rsq01,rcutoff2))
396 r01 = _mm_mul_ps(rsq01,rinv01);
398 /* EWALD ELECTROSTATICS */
400 /* Analytical PME correction */
401 zeta2 = _mm_mul_ps(beta2,rsq01);
402 rinv3 = _mm_mul_ps(rinvsq01,rinv01);
403 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
404 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
405 felec = _mm_mul_ps(qq01,felec);
406 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
407 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv01,sh_ewald));
408 velec = _mm_mul_ps(qq01,velec);
410 cutoff_mask = _mm_cmplt_ps(rsq01,rcutoff2);
412 /* Update potential sum for this i atom from the interaction with this j atom. */
413 velec = _mm_and_ps(velec,cutoff_mask);
414 velecsum = _mm_add_ps(velecsum,velec);
418 fscal = _mm_and_ps(fscal,cutoff_mask);
420 /* Update vectorial force */
421 fix0 = _mm_macc_ps(dx01,fscal,fix0);
422 fiy0 = _mm_macc_ps(dy01,fscal,fiy0);
423 fiz0 = _mm_macc_ps(dz01,fscal,fiz0);
425 fjx1 = _mm_macc_ps(dx01,fscal,fjx1);
426 fjy1 = _mm_macc_ps(dy01,fscal,fjy1);
427 fjz1 = _mm_macc_ps(dz01,fscal,fjz1);
431 /**************************
432 * CALCULATE INTERACTIONS *
433 **************************/
435 if (gmx_mm_any_lt(rsq02,rcutoff2))
438 r02 = _mm_mul_ps(rsq02,rinv02);
440 /* EWALD ELECTROSTATICS */
442 /* Analytical PME correction */
443 zeta2 = _mm_mul_ps(beta2,rsq02);
444 rinv3 = _mm_mul_ps(rinvsq02,rinv02);
445 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
446 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
447 felec = _mm_mul_ps(qq02,felec);
448 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
449 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv02,sh_ewald));
450 velec = _mm_mul_ps(qq02,velec);
452 cutoff_mask = _mm_cmplt_ps(rsq02,rcutoff2);
454 /* Update potential sum for this i atom from the interaction with this j atom. */
455 velec = _mm_and_ps(velec,cutoff_mask);
456 velecsum = _mm_add_ps(velecsum,velec);
460 fscal = _mm_and_ps(fscal,cutoff_mask);
462 /* Update vectorial force */
463 fix0 = _mm_macc_ps(dx02,fscal,fix0);
464 fiy0 = _mm_macc_ps(dy02,fscal,fiy0);
465 fiz0 = _mm_macc_ps(dz02,fscal,fiz0);
467 fjx2 = _mm_macc_ps(dx02,fscal,fjx2);
468 fjy2 = _mm_macc_ps(dy02,fscal,fjy2);
469 fjz2 = _mm_macc_ps(dz02,fscal,fjz2);
473 /**************************
474 * CALCULATE INTERACTIONS *
475 **************************/
477 if (gmx_mm_any_lt(rsq10,rcutoff2))
480 r10 = _mm_mul_ps(rsq10,rinv10);
482 /* EWALD ELECTROSTATICS */
484 /* Analytical PME correction */
485 zeta2 = _mm_mul_ps(beta2,rsq10);
486 rinv3 = _mm_mul_ps(rinvsq10,rinv10);
487 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
488 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
489 felec = _mm_mul_ps(qq10,felec);
490 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
491 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv10,sh_ewald));
492 velec = _mm_mul_ps(qq10,velec);
494 cutoff_mask = _mm_cmplt_ps(rsq10,rcutoff2);
496 /* Update potential sum for this i atom from the interaction with this j atom. */
497 velec = _mm_and_ps(velec,cutoff_mask);
498 velecsum = _mm_add_ps(velecsum,velec);
502 fscal = _mm_and_ps(fscal,cutoff_mask);
504 /* Update vectorial force */
505 fix1 = _mm_macc_ps(dx10,fscal,fix1);
506 fiy1 = _mm_macc_ps(dy10,fscal,fiy1);
507 fiz1 = _mm_macc_ps(dz10,fscal,fiz1);
509 fjx0 = _mm_macc_ps(dx10,fscal,fjx0);
510 fjy0 = _mm_macc_ps(dy10,fscal,fjy0);
511 fjz0 = _mm_macc_ps(dz10,fscal,fjz0);
515 /**************************
516 * CALCULATE INTERACTIONS *
517 **************************/
519 if (gmx_mm_any_lt(rsq11,rcutoff2))
522 r11 = _mm_mul_ps(rsq11,rinv11);
524 /* EWALD ELECTROSTATICS */
526 /* Analytical PME correction */
527 zeta2 = _mm_mul_ps(beta2,rsq11);
528 rinv3 = _mm_mul_ps(rinvsq11,rinv11);
529 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
530 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
531 felec = _mm_mul_ps(qq11,felec);
532 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
533 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv11,sh_ewald));
534 velec = _mm_mul_ps(qq11,velec);
536 cutoff_mask = _mm_cmplt_ps(rsq11,rcutoff2);
538 /* Update potential sum for this i atom from the interaction with this j atom. */
539 velec = _mm_and_ps(velec,cutoff_mask);
540 velecsum = _mm_add_ps(velecsum,velec);
544 fscal = _mm_and_ps(fscal,cutoff_mask);
546 /* Update vectorial force */
547 fix1 = _mm_macc_ps(dx11,fscal,fix1);
548 fiy1 = _mm_macc_ps(dy11,fscal,fiy1);
549 fiz1 = _mm_macc_ps(dz11,fscal,fiz1);
551 fjx1 = _mm_macc_ps(dx11,fscal,fjx1);
552 fjy1 = _mm_macc_ps(dy11,fscal,fjy1);
553 fjz1 = _mm_macc_ps(dz11,fscal,fjz1);
557 /**************************
558 * CALCULATE INTERACTIONS *
559 **************************/
561 if (gmx_mm_any_lt(rsq12,rcutoff2))
564 r12 = _mm_mul_ps(rsq12,rinv12);
566 /* EWALD ELECTROSTATICS */
568 /* Analytical PME correction */
569 zeta2 = _mm_mul_ps(beta2,rsq12);
570 rinv3 = _mm_mul_ps(rinvsq12,rinv12);
571 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
572 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
573 felec = _mm_mul_ps(qq12,felec);
574 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
575 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv12,sh_ewald));
576 velec = _mm_mul_ps(qq12,velec);
578 cutoff_mask = _mm_cmplt_ps(rsq12,rcutoff2);
580 /* Update potential sum for this i atom from the interaction with this j atom. */
581 velec = _mm_and_ps(velec,cutoff_mask);
582 velecsum = _mm_add_ps(velecsum,velec);
586 fscal = _mm_and_ps(fscal,cutoff_mask);
588 /* Update vectorial force */
589 fix1 = _mm_macc_ps(dx12,fscal,fix1);
590 fiy1 = _mm_macc_ps(dy12,fscal,fiy1);
591 fiz1 = _mm_macc_ps(dz12,fscal,fiz1);
593 fjx2 = _mm_macc_ps(dx12,fscal,fjx2);
594 fjy2 = _mm_macc_ps(dy12,fscal,fjy2);
595 fjz2 = _mm_macc_ps(dz12,fscal,fjz2);
599 /**************************
600 * CALCULATE INTERACTIONS *
601 **************************/
603 if (gmx_mm_any_lt(rsq20,rcutoff2))
606 r20 = _mm_mul_ps(rsq20,rinv20);
608 /* EWALD ELECTROSTATICS */
610 /* Analytical PME correction */
611 zeta2 = _mm_mul_ps(beta2,rsq20);
612 rinv3 = _mm_mul_ps(rinvsq20,rinv20);
613 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
614 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
615 felec = _mm_mul_ps(qq20,felec);
616 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
617 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv20,sh_ewald));
618 velec = _mm_mul_ps(qq20,velec);
620 cutoff_mask = _mm_cmplt_ps(rsq20,rcutoff2);
622 /* Update potential sum for this i atom from the interaction with this j atom. */
623 velec = _mm_and_ps(velec,cutoff_mask);
624 velecsum = _mm_add_ps(velecsum,velec);
628 fscal = _mm_and_ps(fscal,cutoff_mask);
630 /* Update vectorial force */
631 fix2 = _mm_macc_ps(dx20,fscal,fix2);
632 fiy2 = _mm_macc_ps(dy20,fscal,fiy2);
633 fiz2 = _mm_macc_ps(dz20,fscal,fiz2);
635 fjx0 = _mm_macc_ps(dx20,fscal,fjx0);
636 fjy0 = _mm_macc_ps(dy20,fscal,fjy0);
637 fjz0 = _mm_macc_ps(dz20,fscal,fjz0);
641 /**************************
642 * CALCULATE INTERACTIONS *
643 **************************/
645 if (gmx_mm_any_lt(rsq21,rcutoff2))
648 r21 = _mm_mul_ps(rsq21,rinv21);
650 /* EWALD ELECTROSTATICS */
652 /* Analytical PME correction */
653 zeta2 = _mm_mul_ps(beta2,rsq21);
654 rinv3 = _mm_mul_ps(rinvsq21,rinv21);
655 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
656 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
657 felec = _mm_mul_ps(qq21,felec);
658 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
659 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv21,sh_ewald));
660 velec = _mm_mul_ps(qq21,velec);
662 cutoff_mask = _mm_cmplt_ps(rsq21,rcutoff2);
664 /* Update potential sum for this i atom from the interaction with this j atom. */
665 velec = _mm_and_ps(velec,cutoff_mask);
666 velecsum = _mm_add_ps(velecsum,velec);
670 fscal = _mm_and_ps(fscal,cutoff_mask);
672 /* Update vectorial force */
673 fix2 = _mm_macc_ps(dx21,fscal,fix2);
674 fiy2 = _mm_macc_ps(dy21,fscal,fiy2);
675 fiz2 = _mm_macc_ps(dz21,fscal,fiz2);
677 fjx1 = _mm_macc_ps(dx21,fscal,fjx1);
678 fjy1 = _mm_macc_ps(dy21,fscal,fjy1);
679 fjz1 = _mm_macc_ps(dz21,fscal,fjz1);
683 /**************************
684 * CALCULATE INTERACTIONS *
685 **************************/
687 if (gmx_mm_any_lt(rsq22,rcutoff2))
690 r22 = _mm_mul_ps(rsq22,rinv22);
692 /* EWALD ELECTROSTATICS */
694 /* Analytical PME correction */
695 zeta2 = _mm_mul_ps(beta2,rsq22);
696 rinv3 = _mm_mul_ps(rinvsq22,rinv22);
697 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
698 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
699 felec = _mm_mul_ps(qq22,felec);
700 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
701 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv22,sh_ewald));
702 velec = _mm_mul_ps(qq22,velec);
704 cutoff_mask = _mm_cmplt_ps(rsq22,rcutoff2);
706 /* Update potential sum for this i atom from the interaction with this j atom. */
707 velec = _mm_and_ps(velec,cutoff_mask);
708 velecsum = _mm_add_ps(velecsum,velec);
712 fscal = _mm_and_ps(fscal,cutoff_mask);
714 /* Update vectorial force */
715 fix2 = _mm_macc_ps(dx22,fscal,fix2);
716 fiy2 = _mm_macc_ps(dy22,fscal,fiy2);
717 fiz2 = _mm_macc_ps(dz22,fscal,fiz2);
719 fjx2 = _mm_macc_ps(dx22,fscal,fjx2);
720 fjy2 = _mm_macc_ps(dy22,fscal,fjy2);
721 fjz2 = _mm_macc_ps(dz22,fscal,fjz2);
725 fjptrA = f+j_coord_offsetA;
726 fjptrB = f+j_coord_offsetB;
727 fjptrC = f+j_coord_offsetC;
728 fjptrD = f+j_coord_offsetD;
730 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
731 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
733 /* Inner loop uses 327 flops */
739 /* Get j neighbor index, and coordinate index */
740 jnrlistA = jjnr[jidx];
741 jnrlistB = jjnr[jidx+1];
742 jnrlistC = jjnr[jidx+2];
743 jnrlistD = jjnr[jidx+3];
744 /* Sign of each element will be negative for non-real atoms.
745 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
746 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
748 dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
749 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
750 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
751 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
752 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
753 j_coord_offsetA = DIM*jnrA;
754 j_coord_offsetB = DIM*jnrB;
755 j_coord_offsetC = DIM*jnrC;
756 j_coord_offsetD = DIM*jnrD;
758 /* load j atom coordinates */
759 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
760 x+j_coord_offsetC,x+j_coord_offsetD,
761 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
763 /* Calculate displacement vector */
764 dx00 = _mm_sub_ps(ix0,jx0);
765 dy00 = _mm_sub_ps(iy0,jy0);
766 dz00 = _mm_sub_ps(iz0,jz0);
767 dx01 = _mm_sub_ps(ix0,jx1);
768 dy01 = _mm_sub_ps(iy0,jy1);
769 dz01 = _mm_sub_ps(iz0,jz1);
770 dx02 = _mm_sub_ps(ix0,jx2);
771 dy02 = _mm_sub_ps(iy0,jy2);
772 dz02 = _mm_sub_ps(iz0,jz2);
773 dx10 = _mm_sub_ps(ix1,jx0);
774 dy10 = _mm_sub_ps(iy1,jy0);
775 dz10 = _mm_sub_ps(iz1,jz0);
776 dx11 = _mm_sub_ps(ix1,jx1);
777 dy11 = _mm_sub_ps(iy1,jy1);
778 dz11 = _mm_sub_ps(iz1,jz1);
779 dx12 = _mm_sub_ps(ix1,jx2);
780 dy12 = _mm_sub_ps(iy1,jy2);
781 dz12 = _mm_sub_ps(iz1,jz2);
782 dx20 = _mm_sub_ps(ix2,jx0);
783 dy20 = _mm_sub_ps(iy2,jy0);
784 dz20 = _mm_sub_ps(iz2,jz0);
785 dx21 = _mm_sub_ps(ix2,jx1);
786 dy21 = _mm_sub_ps(iy2,jy1);
787 dz21 = _mm_sub_ps(iz2,jz1);
788 dx22 = _mm_sub_ps(ix2,jx2);
789 dy22 = _mm_sub_ps(iy2,jy2);
790 dz22 = _mm_sub_ps(iz2,jz2);
792 /* Calculate squared distance and things based on it */
793 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
794 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
795 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
796 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
797 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
798 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
799 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
800 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
801 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
803 rinv00 = gmx_mm_invsqrt_ps(rsq00);
804 rinv01 = gmx_mm_invsqrt_ps(rsq01);
805 rinv02 = gmx_mm_invsqrt_ps(rsq02);
806 rinv10 = gmx_mm_invsqrt_ps(rsq10);
807 rinv11 = gmx_mm_invsqrt_ps(rsq11);
808 rinv12 = gmx_mm_invsqrt_ps(rsq12);
809 rinv20 = gmx_mm_invsqrt_ps(rsq20);
810 rinv21 = gmx_mm_invsqrt_ps(rsq21);
811 rinv22 = gmx_mm_invsqrt_ps(rsq22);
813 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
814 rinvsq01 = _mm_mul_ps(rinv01,rinv01);
815 rinvsq02 = _mm_mul_ps(rinv02,rinv02);
816 rinvsq10 = _mm_mul_ps(rinv10,rinv10);
817 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
818 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
819 rinvsq20 = _mm_mul_ps(rinv20,rinv20);
820 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
821 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
823 fjx0 = _mm_setzero_ps();
824 fjy0 = _mm_setzero_ps();
825 fjz0 = _mm_setzero_ps();
826 fjx1 = _mm_setzero_ps();
827 fjy1 = _mm_setzero_ps();
828 fjz1 = _mm_setzero_ps();
829 fjx2 = _mm_setzero_ps();
830 fjy2 = _mm_setzero_ps();
831 fjz2 = _mm_setzero_ps();
833 /**************************
834 * CALCULATE INTERACTIONS *
835 **************************/
837 if (gmx_mm_any_lt(rsq00,rcutoff2))
840 r00 = _mm_mul_ps(rsq00,rinv00);
841 r00 = _mm_andnot_ps(dummy_mask,r00);
843 /* EWALD ELECTROSTATICS */
845 /* Analytical PME correction */
846 zeta2 = _mm_mul_ps(beta2,rsq00);
847 rinv3 = _mm_mul_ps(rinvsq00,rinv00);
848 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
849 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
850 felec = _mm_mul_ps(qq00,felec);
851 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
852 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv00,sh_ewald));
853 velec = _mm_mul_ps(qq00,velec);
855 /* Analytical LJ-PME */
856 rinvsix = _mm_mul_ps(_mm_mul_ps(rinvsq00,rinvsq00),rinvsq00);
857 ewcljrsq = _mm_mul_ps(ewclj2,rsq00);
858 ewclj6 = _mm_mul_ps(ewclj2,_mm_mul_ps(ewclj2,ewclj2));
859 exponent = gmx_simd_exp_r(ewcljrsq);
860 /* poly = exp(-(beta*r)^2) * (1 + (beta*r)^2 + (beta*r)^4 /2) */
861 poly = _mm_mul_ps(exponent,_mm_macc_ps(_mm_mul_ps(ewcljrsq,ewcljrsq),one_half,_mm_sub_ps(one,ewcljrsq)));
862 /* vvdw6 = [C6 - C6grid * (1-poly)]/r6 */
863 vvdw6 = _mm_mul_ps(_mm_macc_ps(-c6grid_00,_mm_sub_ps(one,poly),c6_00),rinvsix);
864 vvdw12 = _mm_mul_ps(c12_00,_mm_mul_ps(rinvsix,rinvsix));
865 vvdw = _mm_msub_ps(_mm_nmacc_ps(c12_00,_mm_mul_ps(sh_vdw_invrcut6,sh_vdw_invrcut6),vvdw12),one_twelfth,
866 _mm_mul_ps(_mm_sub_ps(vvdw6,_mm_macc_ps(c6grid_00,sh_lj_ewald,_mm_mul_ps(c6_00,sh_vdw_invrcut6))),one_sixth));
867 /* fvdw = vvdw12/r - (vvdw6/r + (C6grid * exponent * beta^6)/r) */
868 fvdw = _mm_mul_ps(_mm_add_ps(vvdw12,_mm_msub_ps(_mm_mul_ps(c6grid_00,one_sixth),_mm_mul_ps(exponent,ewclj6),vvdw6)),rinvsq00);
870 cutoff_mask = _mm_cmplt_ps(rsq00,rcutoff2);
872 /* Update potential sum for this i atom from the interaction with this j atom. */
873 velec = _mm_and_ps(velec,cutoff_mask);
874 velec = _mm_andnot_ps(dummy_mask,velec);
875 velecsum = _mm_add_ps(velecsum,velec);
876 vvdw = _mm_and_ps(vvdw,cutoff_mask);
877 vvdw = _mm_andnot_ps(dummy_mask,vvdw);
878 vvdwsum = _mm_add_ps(vvdwsum,vvdw);
880 fscal = _mm_add_ps(felec,fvdw);
882 fscal = _mm_and_ps(fscal,cutoff_mask);
884 fscal = _mm_andnot_ps(dummy_mask,fscal);
886 /* Update vectorial force */
887 fix0 = _mm_macc_ps(dx00,fscal,fix0);
888 fiy0 = _mm_macc_ps(dy00,fscal,fiy0);
889 fiz0 = _mm_macc_ps(dz00,fscal,fiz0);
891 fjx0 = _mm_macc_ps(dx00,fscal,fjx0);
892 fjy0 = _mm_macc_ps(dy00,fscal,fjy0);
893 fjz0 = _mm_macc_ps(dz00,fscal,fjz0);
897 /**************************
898 * CALCULATE INTERACTIONS *
899 **************************/
901 if (gmx_mm_any_lt(rsq01,rcutoff2))
904 r01 = _mm_mul_ps(rsq01,rinv01);
905 r01 = _mm_andnot_ps(dummy_mask,r01);
907 /* EWALD ELECTROSTATICS */
909 /* Analytical PME correction */
910 zeta2 = _mm_mul_ps(beta2,rsq01);
911 rinv3 = _mm_mul_ps(rinvsq01,rinv01);
912 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
913 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
914 felec = _mm_mul_ps(qq01,felec);
915 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
916 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv01,sh_ewald));
917 velec = _mm_mul_ps(qq01,velec);
919 cutoff_mask = _mm_cmplt_ps(rsq01,rcutoff2);
921 /* Update potential sum for this i atom from the interaction with this j atom. */
922 velec = _mm_and_ps(velec,cutoff_mask);
923 velec = _mm_andnot_ps(dummy_mask,velec);
924 velecsum = _mm_add_ps(velecsum,velec);
928 fscal = _mm_and_ps(fscal,cutoff_mask);
930 fscal = _mm_andnot_ps(dummy_mask,fscal);
932 /* Update vectorial force */
933 fix0 = _mm_macc_ps(dx01,fscal,fix0);
934 fiy0 = _mm_macc_ps(dy01,fscal,fiy0);
935 fiz0 = _mm_macc_ps(dz01,fscal,fiz0);
937 fjx1 = _mm_macc_ps(dx01,fscal,fjx1);
938 fjy1 = _mm_macc_ps(dy01,fscal,fjy1);
939 fjz1 = _mm_macc_ps(dz01,fscal,fjz1);
943 /**************************
944 * CALCULATE INTERACTIONS *
945 **************************/
947 if (gmx_mm_any_lt(rsq02,rcutoff2))
950 r02 = _mm_mul_ps(rsq02,rinv02);
951 r02 = _mm_andnot_ps(dummy_mask,r02);
953 /* EWALD ELECTROSTATICS */
955 /* Analytical PME correction */
956 zeta2 = _mm_mul_ps(beta2,rsq02);
957 rinv3 = _mm_mul_ps(rinvsq02,rinv02);
958 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
959 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
960 felec = _mm_mul_ps(qq02,felec);
961 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
962 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv02,sh_ewald));
963 velec = _mm_mul_ps(qq02,velec);
965 cutoff_mask = _mm_cmplt_ps(rsq02,rcutoff2);
967 /* Update potential sum for this i atom from the interaction with this j atom. */
968 velec = _mm_and_ps(velec,cutoff_mask);
969 velec = _mm_andnot_ps(dummy_mask,velec);
970 velecsum = _mm_add_ps(velecsum,velec);
974 fscal = _mm_and_ps(fscal,cutoff_mask);
976 fscal = _mm_andnot_ps(dummy_mask,fscal);
978 /* Update vectorial force */
979 fix0 = _mm_macc_ps(dx02,fscal,fix0);
980 fiy0 = _mm_macc_ps(dy02,fscal,fiy0);
981 fiz0 = _mm_macc_ps(dz02,fscal,fiz0);
983 fjx2 = _mm_macc_ps(dx02,fscal,fjx2);
984 fjy2 = _mm_macc_ps(dy02,fscal,fjy2);
985 fjz2 = _mm_macc_ps(dz02,fscal,fjz2);
989 /**************************
990 * CALCULATE INTERACTIONS *
991 **************************/
993 if (gmx_mm_any_lt(rsq10,rcutoff2))
996 r10 = _mm_mul_ps(rsq10,rinv10);
997 r10 = _mm_andnot_ps(dummy_mask,r10);
999 /* EWALD ELECTROSTATICS */
1001 /* Analytical PME correction */
1002 zeta2 = _mm_mul_ps(beta2,rsq10);
1003 rinv3 = _mm_mul_ps(rinvsq10,rinv10);
1004 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1005 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1006 felec = _mm_mul_ps(qq10,felec);
1007 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
1008 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv10,sh_ewald));
1009 velec = _mm_mul_ps(qq10,velec);
1011 cutoff_mask = _mm_cmplt_ps(rsq10,rcutoff2);
1013 /* Update potential sum for this i atom from the interaction with this j atom. */
1014 velec = _mm_and_ps(velec,cutoff_mask);
1015 velec = _mm_andnot_ps(dummy_mask,velec);
1016 velecsum = _mm_add_ps(velecsum,velec);
1020 fscal = _mm_and_ps(fscal,cutoff_mask);
1022 fscal = _mm_andnot_ps(dummy_mask,fscal);
1024 /* Update vectorial force */
1025 fix1 = _mm_macc_ps(dx10,fscal,fix1);
1026 fiy1 = _mm_macc_ps(dy10,fscal,fiy1);
1027 fiz1 = _mm_macc_ps(dz10,fscal,fiz1);
1029 fjx0 = _mm_macc_ps(dx10,fscal,fjx0);
1030 fjy0 = _mm_macc_ps(dy10,fscal,fjy0);
1031 fjz0 = _mm_macc_ps(dz10,fscal,fjz0);
1035 /**************************
1036 * CALCULATE INTERACTIONS *
1037 **************************/
1039 if (gmx_mm_any_lt(rsq11,rcutoff2))
1042 r11 = _mm_mul_ps(rsq11,rinv11);
1043 r11 = _mm_andnot_ps(dummy_mask,r11);
1045 /* EWALD ELECTROSTATICS */
1047 /* Analytical PME correction */
1048 zeta2 = _mm_mul_ps(beta2,rsq11);
1049 rinv3 = _mm_mul_ps(rinvsq11,rinv11);
1050 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1051 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1052 felec = _mm_mul_ps(qq11,felec);
1053 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
1054 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv11,sh_ewald));
1055 velec = _mm_mul_ps(qq11,velec);
1057 cutoff_mask = _mm_cmplt_ps(rsq11,rcutoff2);
1059 /* Update potential sum for this i atom from the interaction with this j atom. */
1060 velec = _mm_and_ps(velec,cutoff_mask);
1061 velec = _mm_andnot_ps(dummy_mask,velec);
1062 velecsum = _mm_add_ps(velecsum,velec);
1066 fscal = _mm_and_ps(fscal,cutoff_mask);
1068 fscal = _mm_andnot_ps(dummy_mask,fscal);
1070 /* Update vectorial force */
1071 fix1 = _mm_macc_ps(dx11,fscal,fix1);
1072 fiy1 = _mm_macc_ps(dy11,fscal,fiy1);
1073 fiz1 = _mm_macc_ps(dz11,fscal,fiz1);
1075 fjx1 = _mm_macc_ps(dx11,fscal,fjx1);
1076 fjy1 = _mm_macc_ps(dy11,fscal,fjy1);
1077 fjz1 = _mm_macc_ps(dz11,fscal,fjz1);
1081 /**************************
1082 * CALCULATE INTERACTIONS *
1083 **************************/
1085 if (gmx_mm_any_lt(rsq12,rcutoff2))
1088 r12 = _mm_mul_ps(rsq12,rinv12);
1089 r12 = _mm_andnot_ps(dummy_mask,r12);
1091 /* EWALD ELECTROSTATICS */
1093 /* Analytical PME correction */
1094 zeta2 = _mm_mul_ps(beta2,rsq12);
1095 rinv3 = _mm_mul_ps(rinvsq12,rinv12);
1096 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1097 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1098 felec = _mm_mul_ps(qq12,felec);
1099 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
1100 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv12,sh_ewald));
1101 velec = _mm_mul_ps(qq12,velec);
1103 cutoff_mask = _mm_cmplt_ps(rsq12,rcutoff2);
1105 /* Update potential sum for this i atom from the interaction with this j atom. */
1106 velec = _mm_and_ps(velec,cutoff_mask);
1107 velec = _mm_andnot_ps(dummy_mask,velec);
1108 velecsum = _mm_add_ps(velecsum,velec);
1112 fscal = _mm_and_ps(fscal,cutoff_mask);
1114 fscal = _mm_andnot_ps(dummy_mask,fscal);
1116 /* Update vectorial force */
1117 fix1 = _mm_macc_ps(dx12,fscal,fix1);
1118 fiy1 = _mm_macc_ps(dy12,fscal,fiy1);
1119 fiz1 = _mm_macc_ps(dz12,fscal,fiz1);
1121 fjx2 = _mm_macc_ps(dx12,fscal,fjx2);
1122 fjy2 = _mm_macc_ps(dy12,fscal,fjy2);
1123 fjz2 = _mm_macc_ps(dz12,fscal,fjz2);
1127 /**************************
1128 * CALCULATE INTERACTIONS *
1129 **************************/
1131 if (gmx_mm_any_lt(rsq20,rcutoff2))
1134 r20 = _mm_mul_ps(rsq20,rinv20);
1135 r20 = _mm_andnot_ps(dummy_mask,r20);
1137 /* EWALD ELECTROSTATICS */
1139 /* Analytical PME correction */
1140 zeta2 = _mm_mul_ps(beta2,rsq20);
1141 rinv3 = _mm_mul_ps(rinvsq20,rinv20);
1142 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1143 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1144 felec = _mm_mul_ps(qq20,felec);
1145 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
1146 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv20,sh_ewald));
1147 velec = _mm_mul_ps(qq20,velec);
1149 cutoff_mask = _mm_cmplt_ps(rsq20,rcutoff2);
1151 /* Update potential sum for this i atom from the interaction with this j atom. */
1152 velec = _mm_and_ps(velec,cutoff_mask);
1153 velec = _mm_andnot_ps(dummy_mask,velec);
1154 velecsum = _mm_add_ps(velecsum,velec);
1158 fscal = _mm_and_ps(fscal,cutoff_mask);
1160 fscal = _mm_andnot_ps(dummy_mask,fscal);
1162 /* Update vectorial force */
1163 fix2 = _mm_macc_ps(dx20,fscal,fix2);
1164 fiy2 = _mm_macc_ps(dy20,fscal,fiy2);
1165 fiz2 = _mm_macc_ps(dz20,fscal,fiz2);
1167 fjx0 = _mm_macc_ps(dx20,fscal,fjx0);
1168 fjy0 = _mm_macc_ps(dy20,fscal,fjy0);
1169 fjz0 = _mm_macc_ps(dz20,fscal,fjz0);
1173 /**************************
1174 * CALCULATE INTERACTIONS *
1175 **************************/
1177 if (gmx_mm_any_lt(rsq21,rcutoff2))
1180 r21 = _mm_mul_ps(rsq21,rinv21);
1181 r21 = _mm_andnot_ps(dummy_mask,r21);
1183 /* EWALD ELECTROSTATICS */
1185 /* Analytical PME correction */
1186 zeta2 = _mm_mul_ps(beta2,rsq21);
1187 rinv3 = _mm_mul_ps(rinvsq21,rinv21);
1188 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1189 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1190 felec = _mm_mul_ps(qq21,felec);
1191 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
1192 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv21,sh_ewald));
1193 velec = _mm_mul_ps(qq21,velec);
1195 cutoff_mask = _mm_cmplt_ps(rsq21,rcutoff2);
1197 /* Update potential sum for this i atom from the interaction with this j atom. */
1198 velec = _mm_and_ps(velec,cutoff_mask);
1199 velec = _mm_andnot_ps(dummy_mask,velec);
1200 velecsum = _mm_add_ps(velecsum,velec);
1204 fscal = _mm_and_ps(fscal,cutoff_mask);
1206 fscal = _mm_andnot_ps(dummy_mask,fscal);
1208 /* Update vectorial force */
1209 fix2 = _mm_macc_ps(dx21,fscal,fix2);
1210 fiy2 = _mm_macc_ps(dy21,fscal,fiy2);
1211 fiz2 = _mm_macc_ps(dz21,fscal,fiz2);
1213 fjx1 = _mm_macc_ps(dx21,fscal,fjx1);
1214 fjy1 = _mm_macc_ps(dy21,fscal,fjy1);
1215 fjz1 = _mm_macc_ps(dz21,fscal,fjz1);
1219 /**************************
1220 * CALCULATE INTERACTIONS *
1221 **************************/
1223 if (gmx_mm_any_lt(rsq22,rcutoff2))
1226 r22 = _mm_mul_ps(rsq22,rinv22);
1227 r22 = _mm_andnot_ps(dummy_mask,r22);
1229 /* EWALD ELECTROSTATICS */
1231 /* Analytical PME correction */
1232 zeta2 = _mm_mul_ps(beta2,rsq22);
1233 rinv3 = _mm_mul_ps(rinvsq22,rinv22);
1234 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1235 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1236 felec = _mm_mul_ps(qq22,felec);
1237 pmecorrV = gmx_mm_pmecorrV_ps(zeta2);
1238 velec = _mm_nmacc_ps(pmecorrV,beta,_mm_sub_ps(rinv22,sh_ewald));
1239 velec = _mm_mul_ps(qq22,velec);
1241 cutoff_mask = _mm_cmplt_ps(rsq22,rcutoff2);
1243 /* Update potential sum for this i atom from the interaction with this j atom. */
1244 velec = _mm_and_ps(velec,cutoff_mask);
1245 velec = _mm_andnot_ps(dummy_mask,velec);
1246 velecsum = _mm_add_ps(velecsum,velec);
1250 fscal = _mm_and_ps(fscal,cutoff_mask);
1252 fscal = _mm_andnot_ps(dummy_mask,fscal);
1254 /* Update vectorial force */
1255 fix2 = _mm_macc_ps(dx22,fscal,fix2);
1256 fiy2 = _mm_macc_ps(dy22,fscal,fiy2);
1257 fiz2 = _mm_macc_ps(dz22,fscal,fiz2);
1259 fjx2 = _mm_macc_ps(dx22,fscal,fjx2);
1260 fjy2 = _mm_macc_ps(dy22,fscal,fjy2);
1261 fjz2 = _mm_macc_ps(dz22,fscal,fjz2);
1265 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
1266 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
1267 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
1268 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
1270 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
1271 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1273 /* Inner loop uses 336 flops */
1276 /* End of innermost loop */
1278 gmx_mm_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1279 f+i_coord_offset,fshift+i_shift_offset);
1282 /* Update potential energies */
1283 gmx_mm_update_1pot_ps(velecsum,kernel_data->energygrp_elec+ggid);
1284 gmx_mm_update_1pot_ps(vvdwsum,kernel_data->energygrp_vdw+ggid);
1286 /* Increment number of inner iterations */
1287 inneriter += j_index_end - j_index_start;
1289 /* Outer loop uses 20 flops */
1292 /* Increment number of outer iterations */
1295 /* Update outer/inner flops */
1297 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_VF,outeriter*20 + inneriter*336);
1300 * Gromacs nonbonded kernel: nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3W3_F_avx_128_fma_single
1301 * Electrostatics interaction: Ewald
1302 * VdW interaction: LJEwald
1303 * Geometry: Water3-Water3
1304 * Calculate force/pot: Force
1307 nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3W3_F_avx_128_fma_single
1308 (t_nblist * gmx_restrict nlist,
1309 rvec * gmx_restrict xx,
1310 rvec * gmx_restrict ff,
1311 t_forcerec * gmx_restrict fr,
1312 t_mdatoms * gmx_restrict mdatoms,
1313 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
1314 t_nrnb * gmx_restrict nrnb)
1316 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
1317 * just 0 for non-waters.
1318 * Suffixes A,B,C,D refer to j loop unrolling done with AVX_128, e.g. for the four different
1319 * jnr indices corresponding to data put in the four positions in the SIMD register.
1321 int i_shift_offset,i_coord_offset,outeriter,inneriter;
1322 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1323 int jnrA,jnrB,jnrC,jnrD;
1324 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
1325 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
1326 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
1327 real rcutoff_scalar;
1328 real *shiftvec,*fshift,*x,*f;
1329 real *fjptrA,*fjptrB,*fjptrC,*fjptrD;
1330 real scratch[4*DIM];
1331 __m128 fscal,rcutoff,rcutoff2,jidxall;
1333 __m128 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
1335 __m128 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1337 __m128 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1338 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
1339 __m128 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
1340 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
1341 __m128 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1342 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
1343 __m128 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1344 __m128 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
1345 __m128 dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
1346 __m128 dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
1347 __m128 dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
1348 __m128 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1349 __m128 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1350 __m128 dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
1351 __m128 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1352 __m128 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1353 __m128 velec,felec,velecsum,facel,crf,krf,krf2;
1356 __m128 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
1359 __m128 one_sixth = _mm_set1_ps(1.0/6.0);
1360 __m128 one_twelfth = _mm_set1_ps(1.0/12.0);
1371 __m128 ewclj,ewclj2,ewclj6,ewcljrsq,poly,exponent,f6A,f6B,sh_lj_ewald;
1372 __m128 one_half = _mm_set1_ps(0.5);
1373 __m128 minus_one = _mm_set1_ps(-1.0);
1375 __m128 ewtabscale,eweps,twoeweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
1376 __m128 beta,beta2,beta3,zeta2,pmecorrF,pmecorrV,rinv3;
1378 __m128 dummy_mask,cutoff_mask;
1379 __m128 signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
1380 __m128 one = _mm_set1_ps(1.0);
1381 __m128 two = _mm_set1_ps(2.0);
1387 jindex = nlist->jindex;
1389 shiftidx = nlist->shift;
1391 shiftvec = fr->shift_vec[0];
1392 fshift = fr->fshift[0];
1393 facel = _mm_set1_ps(fr->epsfac);
1394 charge = mdatoms->chargeA;
1395 nvdwtype = fr->ntype;
1396 vdwparam = fr->nbfp;
1397 vdwtype = mdatoms->typeA;
1398 vdwgridparam = fr->ljpme_c6grid;
1399 sh_lj_ewald = _mm_set1_ps(fr->ic->sh_lj_ewald);
1400 ewclj = _mm_set1_ps(fr->ewaldcoeff_lj);
1401 ewclj2 = _mm_mul_ps(minus_one,_mm_mul_ps(ewclj,ewclj));
1403 sh_ewald = _mm_set1_ps(fr->ic->sh_ewald);
1404 beta = _mm_set1_ps(fr->ic->ewaldcoeff_q);
1405 beta2 = _mm_mul_ps(beta,beta);
1406 beta3 = _mm_mul_ps(beta,beta2);
1407 ewtab = fr->ic->tabq_coul_F;
1408 ewtabscale = _mm_set1_ps(fr->ic->tabq_scale);
1409 ewtabhalfspace = _mm_set1_ps(0.5/fr->ic->tabq_scale);
1411 /* Setup water-specific parameters */
1412 inr = nlist->iinr[0];
1413 iq0 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+0]));
1414 iq1 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
1415 iq2 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
1416 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
1418 jq0 = _mm_set1_ps(charge[inr+0]);
1419 jq1 = _mm_set1_ps(charge[inr+1]);
1420 jq2 = _mm_set1_ps(charge[inr+2]);
1421 vdwjidx0A = 2*vdwtype[inr+0];
1422 qq00 = _mm_mul_ps(iq0,jq0);
1423 c6_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A]);
1424 c12_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A+1]);
1425 c6grid_00 = _mm_set1_ps(vdwgridparam[vdwioffset0+vdwjidx0A]);
1426 qq01 = _mm_mul_ps(iq0,jq1);
1427 qq02 = _mm_mul_ps(iq0,jq2);
1428 qq10 = _mm_mul_ps(iq1,jq0);
1429 qq11 = _mm_mul_ps(iq1,jq1);
1430 qq12 = _mm_mul_ps(iq1,jq2);
1431 qq20 = _mm_mul_ps(iq2,jq0);
1432 qq21 = _mm_mul_ps(iq2,jq1);
1433 qq22 = _mm_mul_ps(iq2,jq2);
1435 /* When we use explicit cutoffs the value must be identical for elec and VdW, so use elec as an arbitrary choice */
1436 rcutoff_scalar = fr->rcoulomb;
1437 rcutoff = _mm_set1_ps(rcutoff_scalar);
1438 rcutoff2 = _mm_mul_ps(rcutoff,rcutoff);
1440 sh_vdw_invrcut6 = _mm_set1_ps(fr->ic->sh_invrc6);
1441 rvdw = _mm_set1_ps(fr->rvdw);
1443 /* Avoid stupid compiler warnings */
1444 jnrA = jnrB = jnrC = jnrD = 0;
1445 j_coord_offsetA = 0;
1446 j_coord_offsetB = 0;
1447 j_coord_offsetC = 0;
1448 j_coord_offsetD = 0;
1453 for(iidx=0;iidx<4*DIM;iidx++)
1455 scratch[iidx] = 0.0;
1458 /* Start outer loop over neighborlists */
1459 for(iidx=0; iidx<nri; iidx++)
1461 /* Load shift vector for this list */
1462 i_shift_offset = DIM*shiftidx[iidx];
1464 /* Load limits for loop over neighbors */
1465 j_index_start = jindex[iidx];
1466 j_index_end = jindex[iidx+1];
1468 /* Get outer coordinate index */
1470 i_coord_offset = DIM*inr;
1472 /* Load i particle coords and add shift vector */
1473 gmx_mm_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset,
1474 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
1476 fix0 = _mm_setzero_ps();
1477 fiy0 = _mm_setzero_ps();
1478 fiz0 = _mm_setzero_ps();
1479 fix1 = _mm_setzero_ps();
1480 fiy1 = _mm_setzero_ps();
1481 fiz1 = _mm_setzero_ps();
1482 fix2 = _mm_setzero_ps();
1483 fiy2 = _mm_setzero_ps();
1484 fiz2 = _mm_setzero_ps();
1486 /* Start inner kernel loop */
1487 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
1490 /* Get j neighbor index, and coordinate index */
1492 jnrB = jjnr[jidx+1];
1493 jnrC = jjnr[jidx+2];
1494 jnrD = jjnr[jidx+3];
1495 j_coord_offsetA = DIM*jnrA;
1496 j_coord_offsetB = DIM*jnrB;
1497 j_coord_offsetC = DIM*jnrC;
1498 j_coord_offsetD = DIM*jnrD;
1500 /* load j atom coordinates */
1501 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1502 x+j_coord_offsetC,x+j_coord_offsetD,
1503 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1505 /* Calculate displacement vector */
1506 dx00 = _mm_sub_ps(ix0,jx0);
1507 dy00 = _mm_sub_ps(iy0,jy0);
1508 dz00 = _mm_sub_ps(iz0,jz0);
1509 dx01 = _mm_sub_ps(ix0,jx1);
1510 dy01 = _mm_sub_ps(iy0,jy1);
1511 dz01 = _mm_sub_ps(iz0,jz1);
1512 dx02 = _mm_sub_ps(ix0,jx2);
1513 dy02 = _mm_sub_ps(iy0,jy2);
1514 dz02 = _mm_sub_ps(iz0,jz2);
1515 dx10 = _mm_sub_ps(ix1,jx0);
1516 dy10 = _mm_sub_ps(iy1,jy0);
1517 dz10 = _mm_sub_ps(iz1,jz0);
1518 dx11 = _mm_sub_ps(ix1,jx1);
1519 dy11 = _mm_sub_ps(iy1,jy1);
1520 dz11 = _mm_sub_ps(iz1,jz1);
1521 dx12 = _mm_sub_ps(ix1,jx2);
1522 dy12 = _mm_sub_ps(iy1,jy2);
1523 dz12 = _mm_sub_ps(iz1,jz2);
1524 dx20 = _mm_sub_ps(ix2,jx0);
1525 dy20 = _mm_sub_ps(iy2,jy0);
1526 dz20 = _mm_sub_ps(iz2,jz0);
1527 dx21 = _mm_sub_ps(ix2,jx1);
1528 dy21 = _mm_sub_ps(iy2,jy1);
1529 dz21 = _mm_sub_ps(iz2,jz1);
1530 dx22 = _mm_sub_ps(ix2,jx2);
1531 dy22 = _mm_sub_ps(iy2,jy2);
1532 dz22 = _mm_sub_ps(iz2,jz2);
1534 /* Calculate squared distance and things based on it */
1535 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
1536 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
1537 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
1538 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
1539 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1540 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1541 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
1542 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1543 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1545 rinv00 = gmx_mm_invsqrt_ps(rsq00);
1546 rinv01 = gmx_mm_invsqrt_ps(rsq01);
1547 rinv02 = gmx_mm_invsqrt_ps(rsq02);
1548 rinv10 = gmx_mm_invsqrt_ps(rsq10);
1549 rinv11 = gmx_mm_invsqrt_ps(rsq11);
1550 rinv12 = gmx_mm_invsqrt_ps(rsq12);
1551 rinv20 = gmx_mm_invsqrt_ps(rsq20);
1552 rinv21 = gmx_mm_invsqrt_ps(rsq21);
1553 rinv22 = gmx_mm_invsqrt_ps(rsq22);
1555 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
1556 rinvsq01 = _mm_mul_ps(rinv01,rinv01);
1557 rinvsq02 = _mm_mul_ps(rinv02,rinv02);
1558 rinvsq10 = _mm_mul_ps(rinv10,rinv10);
1559 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
1560 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
1561 rinvsq20 = _mm_mul_ps(rinv20,rinv20);
1562 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
1563 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
1565 fjx0 = _mm_setzero_ps();
1566 fjy0 = _mm_setzero_ps();
1567 fjz0 = _mm_setzero_ps();
1568 fjx1 = _mm_setzero_ps();
1569 fjy1 = _mm_setzero_ps();
1570 fjz1 = _mm_setzero_ps();
1571 fjx2 = _mm_setzero_ps();
1572 fjy2 = _mm_setzero_ps();
1573 fjz2 = _mm_setzero_ps();
1575 /**************************
1576 * CALCULATE INTERACTIONS *
1577 **************************/
1579 if (gmx_mm_any_lt(rsq00,rcutoff2))
1582 r00 = _mm_mul_ps(rsq00,rinv00);
1584 /* EWALD ELECTROSTATICS */
1586 /* Analytical PME correction */
1587 zeta2 = _mm_mul_ps(beta2,rsq00);
1588 rinv3 = _mm_mul_ps(rinvsq00,rinv00);
1589 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1590 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1591 felec = _mm_mul_ps(qq00,felec);
1593 /* Analytical LJ-PME */
1594 rinvsix = _mm_mul_ps(_mm_mul_ps(rinvsq00,rinvsq00),rinvsq00);
1595 ewcljrsq = _mm_mul_ps(ewclj2,rsq00);
1596 ewclj6 = _mm_mul_ps(ewclj2,_mm_mul_ps(ewclj2,ewclj2));
1597 exponent = gmx_simd_exp_r(ewcljrsq);
1598 /* poly = exp(-(beta*r)^2) * (1 + (beta*r)^2 + (beta*r)^4 /2) */
1599 poly = _mm_mul_ps(exponent,_mm_macc_ps(_mm_mul_ps(ewcljrsq,ewcljrsq),one_half,_mm_sub_ps(one,ewcljrsq)));
1600 /* f6A = 6 * C6grid * (1 - poly) */
1601 f6A = _mm_mul_ps(c6grid_00,_mm_sub_ps(one,poly));
1602 /* f6B = C6grid * exponent * beta^6 */
1603 f6B = _mm_mul_ps(_mm_mul_ps(c6grid_00,one_sixth),_mm_mul_ps(exponent,ewclj6));
1604 /* fvdw = 12*C12/r13 - ((6*C6 - f6A)/r6 + f6B)/r */
1605 fvdw = _mm_mul_ps(_mm_macc_ps(_mm_msub_ps(c12_00,rinvsix,_mm_sub_ps(c6_00,f6A)),rinvsix,f6B),rinvsq00);
1607 cutoff_mask = _mm_cmplt_ps(rsq00,rcutoff2);
1609 fscal = _mm_add_ps(felec,fvdw);
1611 fscal = _mm_and_ps(fscal,cutoff_mask);
1613 /* Update vectorial force */
1614 fix0 = _mm_macc_ps(dx00,fscal,fix0);
1615 fiy0 = _mm_macc_ps(dy00,fscal,fiy0);
1616 fiz0 = _mm_macc_ps(dz00,fscal,fiz0);
1618 fjx0 = _mm_macc_ps(dx00,fscal,fjx0);
1619 fjy0 = _mm_macc_ps(dy00,fscal,fjy0);
1620 fjz0 = _mm_macc_ps(dz00,fscal,fjz0);
1624 /**************************
1625 * CALCULATE INTERACTIONS *
1626 **************************/
1628 if (gmx_mm_any_lt(rsq01,rcutoff2))
1631 r01 = _mm_mul_ps(rsq01,rinv01);
1633 /* EWALD ELECTROSTATICS */
1635 /* Analytical PME correction */
1636 zeta2 = _mm_mul_ps(beta2,rsq01);
1637 rinv3 = _mm_mul_ps(rinvsq01,rinv01);
1638 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1639 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1640 felec = _mm_mul_ps(qq01,felec);
1642 cutoff_mask = _mm_cmplt_ps(rsq01,rcutoff2);
1646 fscal = _mm_and_ps(fscal,cutoff_mask);
1648 /* Update vectorial force */
1649 fix0 = _mm_macc_ps(dx01,fscal,fix0);
1650 fiy0 = _mm_macc_ps(dy01,fscal,fiy0);
1651 fiz0 = _mm_macc_ps(dz01,fscal,fiz0);
1653 fjx1 = _mm_macc_ps(dx01,fscal,fjx1);
1654 fjy1 = _mm_macc_ps(dy01,fscal,fjy1);
1655 fjz1 = _mm_macc_ps(dz01,fscal,fjz1);
1659 /**************************
1660 * CALCULATE INTERACTIONS *
1661 **************************/
1663 if (gmx_mm_any_lt(rsq02,rcutoff2))
1666 r02 = _mm_mul_ps(rsq02,rinv02);
1668 /* EWALD ELECTROSTATICS */
1670 /* Analytical PME correction */
1671 zeta2 = _mm_mul_ps(beta2,rsq02);
1672 rinv3 = _mm_mul_ps(rinvsq02,rinv02);
1673 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1674 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1675 felec = _mm_mul_ps(qq02,felec);
1677 cutoff_mask = _mm_cmplt_ps(rsq02,rcutoff2);
1681 fscal = _mm_and_ps(fscal,cutoff_mask);
1683 /* Update vectorial force */
1684 fix0 = _mm_macc_ps(dx02,fscal,fix0);
1685 fiy0 = _mm_macc_ps(dy02,fscal,fiy0);
1686 fiz0 = _mm_macc_ps(dz02,fscal,fiz0);
1688 fjx2 = _mm_macc_ps(dx02,fscal,fjx2);
1689 fjy2 = _mm_macc_ps(dy02,fscal,fjy2);
1690 fjz2 = _mm_macc_ps(dz02,fscal,fjz2);
1694 /**************************
1695 * CALCULATE INTERACTIONS *
1696 **************************/
1698 if (gmx_mm_any_lt(rsq10,rcutoff2))
1701 r10 = _mm_mul_ps(rsq10,rinv10);
1703 /* EWALD ELECTROSTATICS */
1705 /* Analytical PME correction */
1706 zeta2 = _mm_mul_ps(beta2,rsq10);
1707 rinv3 = _mm_mul_ps(rinvsq10,rinv10);
1708 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1709 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1710 felec = _mm_mul_ps(qq10,felec);
1712 cutoff_mask = _mm_cmplt_ps(rsq10,rcutoff2);
1716 fscal = _mm_and_ps(fscal,cutoff_mask);
1718 /* Update vectorial force */
1719 fix1 = _mm_macc_ps(dx10,fscal,fix1);
1720 fiy1 = _mm_macc_ps(dy10,fscal,fiy1);
1721 fiz1 = _mm_macc_ps(dz10,fscal,fiz1);
1723 fjx0 = _mm_macc_ps(dx10,fscal,fjx0);
1724 fjy0 = _mm_macc_ps(dy10,fscal,fjy0);
1725 fjz0 = _mm_macc_ps(dz10,fscal,fjz0);
1729 /**************************
1730 * CALCULATE INTERACTIONS *
1731 **************************/
1733 if (gmx_mm_any_lt(rsq11,rcutoff2))
1736 r11 = _mm_mul_ps(rsq11,rinv11);
1738 /* EWALD ELECTROSTATICS */
1740 /* Analytical PME correction */
1741 zeta2 = _mm_mul_ps(beta2,rsq11);
1742 rinv3 = _mm_mul_ps(rinvsq11,rinv11);
1743 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1744 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1745 felec = _mm_mul_ps(qq11,felec);
1747 cutoff_mask = _mm_cmplt_ps(rsq11,rcutoff2);
1751 fscal = _mm_and_ps(fscal,cutoff_mask);
1753 /* Update vectorial force */
1754 fix1 = _mm_macc_ps(dx11,fscal,fix1);
1755 fiy1 = _mm_macc_ps(dy11,fscal,fiy1);
1756 fiz1 = _mm_macc_ps(dz11,fscal,fiz1);
1758 fjx1 = _mm_macc_ps(dx11,fscal,fjx1);
1759 fjy1 = _mm_macc_ps(dy11,fscal,fjy1);
1760 fjz1 = _mm_macc_ps(dz11,fscal,fjz1);
1764 /**************************
1765 * CALCULATE INTERACTIONS *
1766 **************************/
1768 if (gmx_mm_any_lt(rsq12,rcutoff2))
1771 r12 = _mm_mul_ps(rsq12,rinv12);
1773 /* EWALD ELECTROSTATICS */
1775 /* Analytical PME correction */
1776 zeta2 = _mm_mul_ps(beta2,rsq12);
1777 rinv3 = _mm_mul_ps(rinvsq12,rinv12);
1778 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1779 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1780 felec = _mm_mul_ps(qq12,felec);
1782 cutoff_mask = _mm_cmplt_ps(rsq12,rcutoff2);
1786 fscal = _mm_and_ps(fscal,cutoff_mask);
1788 /* Update vectorial force */
1789 fix1 = _mm_macc_ps(dx12,fscal,fix1);
1790 fiy1 = _mm_macc_ps(dy12,fscal,fiy1);
1791 fiz1 = _mm_macc_ps(dz12,fscal,fiz1);
1793 fjx2 = _mm_macc_ps(dx12,fscal,fjx2);
1794 fjy2 = _mm_macc_ps(dy12,fscal,fjy2);
1795 fjz2 = _mm_macc_ps(dz12,fscal,fjz2);
1799 /**************************
1800 * CALCULATE INTERACTIONS *
1801 **************************/
1803 if (gmx_mm_any_lt(rsq20,rcutoff2))
1806 r20 = _mm_mul_ps(rsq20,rinv20);
1808 /* EWALD ELECTROSTATICS */
1810 /* Analytical PME correction */
1811 zeta2 = _mm_mul_ps(beta2,rsq20);
1812 rinv3 = _mm_mul_ps(rinvsq20,rinv20);
1813 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1814 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1815 felec = _mm_mul_ps(qq20,felec);
1817 cutoff_mask = _mm_cmplt_ps(rsq20,rcutoff2);
1821 fscal = _mm_and_ps(fscal,cutoff_mask);
1823 /* Update vectorial force */
1824 fix2 = _mm_macc_ps(dx20,fscal,fix2);
1825 fiy2 = _mm_macc_ps(dy20,fscal,fiy2);
1826 fiz2 = _mm_macc_ps(dz20,fscal,fiz2);
1828 fjx0 = _mm_macc_ps(dx20,fscal,fjx0);
1829 fjy0 = _mm_macc_ps(dy20,fscal,fjy0);
1830 fjz0 = _mm_macc_ps(dz20,fscal,fjz0);
1834 /**************************
1835 * CALCULATE INTERACTIONS *
1836 **************************/
1838 if (gmx_mm_any_lt(rsq21,rcutoff2))
1841 r21 = _mm_mul_ps(rsq21,rinv21);
1843 /* EWALD ELECTROSTATICS */
1845 /* Analytical PME correction */
1846 zeta2 = _mm_mul_ps(beta2,rsq21);
1847 rinv3 = _mm_mul_ps(rinvsq21,rinv21);
1848 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1849 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1850 felec = _mm_mul_ps(qq21,felec);
1852 cutoff_mask = _mm_cmplt_ps(rsq21,rcutoff2);
1856 fscal = _mm_and_ps(fscal,cutoff_mask);
1858 /* Update vectorial force */
1859 fix2 = _mm_macc_ps(dx21,fscal,fix2);
1860 fiy2 = _mm_macc_ps(dy21,fscal,fiy2);
1861 fiz2 = _mm_macc_ps(dz21,fscal,fiz2);
1863 fjx1 = _mm_macc_ps(dx21,fscal,fjx1);
1864 fjy1 = _mm_macc_ps(dy21,fscal,fjy1);
1865 fjz1 = _mm_macc_ps(dz21,fscal,fjz1);
1869 /**************************
1870 * CALCULATE INTERACTIONS *
1871 **************************/
1873 if (gmx_mm_any_lt(rsq22,rcutoff2))
1876 r22 = _mm_mul_ps(rsq22,rinv22);
1878 /* EWALD ELECTROSTATICS */
1880 /* Analytical PME correction */
1881 zeta2 = _mm_mul_ps(beta2,rsq22);
1882 rinv3 = _mm_mul_ps(rinvsq22,rinv22);
1883 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
1884 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
1885 felec = _mm_mul_ps(qq22,felec);
1887 cutoff_mask = _mm_cmplt_ps(rsq22,rcutoff2);
1891 fscal = _mm_and_ps(fscal,cutoff_mask);
1893 /* Update vectorial force */
1894 fix2 = _mm_macc_ps(dx22,fscal,fix2);
1895 fiy2 = _mm_macc_ps(dy22,fscal,fiy2);
1896 fiz2 = _mm_macc_ps(dz22,fscal,fiz2);
1898 fjx2 = _mm_macc_ps(dx22,fscal,fjx2);
1899 fjy2 = _mm_macc_ps(dy22,fscal,fjy2);
1900 fjz2 = _mm_macc_ps(dz22,fscal,fjz2);
1904 fjptrA = f+j_coord_offsetA;
1905 fjptrB = f+j_coord_offsetB;
1906 fjptrC = f+j_coord_offsetC;
1907 fjptrD = f+j_coord_offsetD;
1909 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
1910 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1912 /* Inner loop uses 300 flops */
1915 if(jidx<j_index_end)
1918 /* Get j neighbor index, and coordinate index */
1919 jnrlistA = jjnr[jidx];
1920 jnrlistB = jjnr[jidx+1];
1921 jnrlistC = jjnr[jidx+2];
1922 jnrlistD = jjnr[jidx+3];
1923 /* Sign of each element will be negative for non-real atoms.
1924 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
1925 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
1927 dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
1928 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
1929 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
1930 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
1931 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
1932 j_coord_offsetA = DIM*jnrA;
1933 j_coord_offsetB = DIM*jnrB;
1934 j_coord_offsetC = DIM*jnrC;
1935 j_coord_offsetD = DIM*jnrD;
1937 /* load j atom coordinates */
1938 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1939 x+j_coord_offsetC,x+j_coord_offsetD,
1940 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1942 /* Calculate displacement vector */
1943 dx00 = _mm_sub_ps(ix0,jx0);
1944 dy00 = _mm_sub_ps(iy0,jy0);
1945 dz00 = _mm_sub_ps(iz0,jz0);
1946 dx01 = _mm_sub_ps(ix0,jx1);
1947 dy01 = _mm_sub_ps(iy0,jy1);
1948 dz01 = _mm_sub_ps(iz0,jz1);
1949 dx02 = _mm_sub_ps(ix0,jx2);
1950 dy02 = _mm_sub_ps(iy0,jy2);
1951 dz02 = _mm_sub_ps(iz0,jz2);
1952 dx10 = _mm_sub_ps(ix1,jx0);
1953 dy10 = _mm_sub_ps(iy1,jy0);
1954 dz10 = _mm_sub_ps(iz1,jz0);
1955 dx11 = _mm_sub_ps(ix1,jx1);
1956 dy11 = _mm_sub_ps(iy1,jy1);
1957 dz11 = _mm_sub_ps(iz1,jz1);
1958 dx12 = _mm_sub_ps(ix1,jx2);
1959 dy12 = _mm_sub_ps(iy1,jy2);
1960 dz12 = _mm_sub_ps(iz1,jz2);
1961 dx20 = _mm_sub_ps(ix2,jx0);
1962 dy20 = _mm_sub_ps(iy2,jy0);
1963 dz20 = _mm_sub_ps(iz2,jz0);
1964 dx21 = _mm_sub_ps(ix2,jx1);
1965 dy21 = _mm_sub_ps(iy2,jy1);
1966 dz21 = _mm_sub_ps(iz2,jz1);
1967 dx22 = _mm_sub_ps(ix2,jx2);
1968 dy22 = _mm_sub_ps(iy2,jy2);
1969 dz22 = _mm_sub_ps(iz2,jz2);
1971 /* Calculate squared distance and things based on it */
1972 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
1973 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
1974 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
1975 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
1976 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1977 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1978 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
1979 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1980 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1982 rinv00 = gmx_mm_invsqrt_ps(rsq00);
1983 rinv01 = gmx_mm_invsqrt_ps(rsq01);
1984 rinv02 = gmx_mm_invsqrt_ps(rsq02);
1985 rinv10 = gmx_mm_invsqrt_ps(rsq10);
1986 rinv11 = gmx_mm_invsqrt_ps(rsq11);
1987 rinv12 = gmx_mm_invsqrt_ps(rsq12);
1988 rinv20 = gmx_mm_invsqrt_ps(rsq20);
1989 rinv21 = gmx_mm_invsqrt_ps(rsq21);
1990 rinv22 = gmx_mm_invsqrt_ps(rsq22);
1992 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
1993 rinvsq01 = _mm_mul_ps(rinv01,rinv01);
1994 rinvsq02 = _mm_mul_ps(rinv02,rinv02);
1995 rinvsq10 = _mm_mul_ps(rinv10,rinv10);
1996 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
1997 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
1998 rinvsq20 = _mm_mul_ps(rinv20,rinv20);
1999 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
2000 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
2002 fjx0 = _mm_setzero_ps();
2003 fjy0 = _mm_setzero_ps();
2004 fjz0 = _mm_setzero_ps();
2005 fjx1 = _mm_setzero_ps();
2006 fjy1 = _mm_setzero_ps();
2007 fjz1 = _mm_setzero_ps();
2008 fjx2 = _mm_setzero_ps();
2009 fjy2 = _mm_setzero_ps();
2010 fjz2 = _mm_setzero_ps();
2012 /**************************
2013 * CALCULATE INTERACTIONS *
2014 **************************/
2016 if (gmx_mm_any_lt(rsq00,rcutoff2))
2019 r00 = _mm_mul_ps(rsq00,rinv00);
2020 r00 = _mm_andnot_ps(dummy_mask,r00);
2022 /* EWALD ELECTROSTATICS */
2024 /* Analytical PME correction */
2025 zeta2 = _mm_mul_ps(beta2,rsq00);
2026 rinv3 = _mm_mul_ps(rinvsq00,rinv00);
2027 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
2028 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
2029 felec = _mm_mul_ps(qq00,felec);
2031 /* Analytical LJ-PME */
2032 rinvsix = _mm_mul_ps(_mm_mul_ps(rinvsq00,rinvsq00),rinvsq00);
2033 ewcljrsq = _mm_mul_ps(ewclj2,rsq00);
2034 ewclj6 = _mm_mul_ps(ewclj2,_mm_mul_ps(ewclj2,ewclj2));
2035 exponent = gmx_simd_exp_r(ewcljrsq);
2036 /* poly = exp(-(beta*r)^2) * (1 + (beta*r)^2 + (beta*r)^4 /2) */
2037 poly = _mm_mul_ps(exponent,_mm_macc_ps(_mm_mul_ps(ewcljrsq,ewcljrsq),one_half,_mm_sub_ps(one,ewcljrsq)));
2038 /* f6A = 6 * C6grid * (1 - poly) */
2039 f6A = _mm_mul_ps(c6grid_00,_mm_sub_ps(one,poly));
2040 /* f6B = C6grid * exponent * beta^6 */
2041 f6B = _mm_mul_ps(_mm_mul_ps(c6grid_00,one_sixth),_mm_mul_ps(exponent,ewclj6));
2042 /* fvdw = 12*C12/r13 - ((6*C6 - f6A)/r6 + f6B)/r */
2043 fvdw = _mm_mul_ps(_mm_macc_ps(_mm_msub_ps(c12_00,rinvsix,_mm_sub_ps(c6_00,f6A)),rinvsix,f6B),rinvsq00);
2045 cutoff_mask = _mm_cmplt_ps(rsq00,rcutoff2);
2047 fscal = _mm_add_ps(felec,fvdw);
2049 fscal = _mm_and_ps(fscal,cutoff_mask);
2051 fscal = _mm_andnot_ps(dummy_mask,fscal);
2053 /* Update vectorial force */
2054 fix0 = _mm_macc_ps(dx00,fscal,fix0);
2055 fiy0 = _mm_macc_ps(dy00,fscal,fiy0);
2056 fiz0 = _mm_macc_ps(dz00,fscal,fiz0);
2058 fjx0 = _mm_macc_ps(dx00,fscal,fjx0);
2059 fjy0 = _mm_macc_ps(dy00,fscal,fjy0);
2060 fjz0 = _mm_macc_ps(dz00,fscal,fjz0);
2064 /**************************
2065 * CALCULATE INTERACTIONS *
2066 **************************/
2068 if (gmx_mm_any_lt(rsq01,rcutoff2))
2071 r01 = _mm_mul_ps(rsq01,rinv01);
2072 r01 = _mm_andnot_ps(dummy_mask,r01);
2074 /* EWALD ELECTROSTATICS */
2076 /* Analytical PME correction */
2077 zeta2 = _mm_mul_ps(beta2,rsq01);
2078 rinv3 = _mm_mul_ps(rinvsq01,rinv01);
2079 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
2080 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
2081 felec = _mm_mul_ps(qq01,felec);
2083 cutoff_mask = _mm_cmplt_ps(rsq01,rcutoff2);
2087 fscal = _mm_and_ps(fscal,cutoff_mask);
2089 fscal = _mm_andnot_ps(dummy_mask,fscal);
2091 /* Update vectorial force */
2092 fix0 = _mm_macc_ps(dx01,fscal,fix0);
2093 fiy0 = _mm_macc_ps(dy01,fscal,fiy0);
2094 fiz0 = _mm_macc_ps(dz01,fscal,fiz0);
2096 fjx1 = _mm_macc_ps(dx01,fscal,fjx1);
2097 fjy1 = _mm_macc_ps(dy01,fscal,fjy1);
2098 fjz1 = _mm_macc_ps(dz01,fscal,fjz1);
2102 /**************************
2103 * CALCULATE INTERACTIONS *
2104 **************************/
2106 if (gmx_mm_any_lt(rsq02,rcutoff2))
2109 r02 = _mm_mul_ps(rsq02,rinv02);
2110 r02 = _mm_andnot_ps(dummy_mask,r02);
2112 /* EWALD ELECTROSTATICS */
2114 /* Analytical PME correction */
2115 zeta2 = _mm_mul_ps(beta2,rsq02);
2116 rinv3 = _mm_mul_ps(rinvsq02,rinv02);
2117 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
2118 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
2119 felec = _mm_mul_ps(qq02,felec);
2121 cutoff_mask = _mm_cmplt_ps(rsq02,rcutoff2);
2125 fscal = _mm_and_ps(fscal,cutoff_mask);
2127 fscal = _mm_andnot_ps(dummy_mask,fscal);
2129 /* Update vectorial force */
2130 fix0 = _mm_macc_ps(dx02,fscal,fix0);
2131 fiy0 = _mm_macc_ps(dy02,fscal,fiy0);
2132 fiz0 = _mm_macc_ps(dz02,fscal,fiz0);
2134 fjx2 = _mm_macc_ps(dx02,fscal,fjx2);
2135 fjy2 = _mm_macc_ps(dy02,fscal,fjy2);
2136 fjz2 = _mm_macc_ps(dz02,fscal,fjz2);
2140 /**************************
2141 * CALCULATE INTERACTIONS *
2142 **************************/
2144 if (gmx_mm_any_lt(rsq10,rcutoff2))
2147 r10 = _mm_mul_ps(rsq10,rinv10);
2148 r10 = _mm_andnot_ps(dummy_mask,r10);
2150 /* EWALD ELECTROSTATICS */
2152 /* Analytical PME correction */
2153 zeta2 = _mm_mul_ps(beta2,rsq10);
2154 rinv3 = _mm_mul_ps(rinvsq10,rinv10);
2155 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
2156 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
2157 felec = _mm_mul_ps(qq10,felec);
2159 cutoff_mask = _mm_cmplt_ps(rsq10,rcutoff2);
2163 fscal = _mm_and_ps(fscal,cutoff_mask);
2165 fscal = _mm_andnot_ps(dummy_mask,fscal);
2167 /* Update vectorial force */
2168 fix1 = _mm_macc_ps(dx10,fscal,fix1);
2169 fiy1 = _mm_macc_ps(dy10,fscal,fiy1);
2170 fiz1 = _mm_macc_ps(dz10,fscal,fiz1);
2172 fjx0 = _mm_macc_ps(dx10,fscal,fjx0);
2173 fjy0 = _mm_macc_ps(dy10,fscal,fjy0);
2174 fjz0 = _mm_macc_ps(dz10,fscal,fjz0);
2178 /**************************
2179 * CALCULATE INTERACTIONS *
2180 **************************/
2182 if (gmx_mm_any_lt(rsq11,rcutoff2))
2185 r11 = _mm_mul_ps(rsq11,rinv11);
2186 r11 = _mm_andnot_ps(dummy_mask,r11);
2188 /* EWALD ELECTROSTATICS */
2190 /* Analytical PME correction */
2191 zeta2 = _mm_mul_ps(beta2,rsq11);
2192 rinv3 = _mm_mul_ps(rinvsq11,rinv11);
2193 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
2194 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
2195 felec = _mm_mul_ps(qq11,felec);
2197 cutoff_mask = _mm_cmplt_ps(rsq11,rcutoff2);
2201 fscal = _mm_and_ps(fscal,cutoff_mask);
2203 fscal = _mm_andnot_ps(dummy_mask,fscal);
2205 /* Update vectorial force */
2206 fix1 = _mm_macc_ps(dx11,fscal,fix1);
2207 fiy1 = _mm_macc_ps(dy11,fscal,fiy1);
2208 fiz1 = _mm_macc_ps(dz11,fscal,fiz1);
2210 fjx1 = _mm_macc_ps(dx11,fscal,fjx1);
2211 fjy1 = _mm_macc_ps(dy11,fscal,fjy1);
2212 fjz1 = _mm_macc_ps(dz11,fscal,fjz1);
2216 /**************************
2217 * CALCULATE INTERACTIONS *
2218 **************************/
2220 if (gmx_mm_any_lt(rsq12,rcutoff2))
2223 r12 = _mm_mul_ps(rsq12,rinv12);
2224 r12 = _mm_andnot_ps(dummy_mask,r12);
2226 /* EWALD ELECTROSTATICS */
2228 /* Analytical PME correction */
2229 zeta2 = _mm_mul_ps(beta2,rsq12);
2230 rinv3 = _mm_mul_ps(rinvsq12,rinv12);
2231 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
2232 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
2233 felec = _mm_mul_ps(qq12,felec);
2235 cutoff_mask = _mm_cmplt_ps(rsq12,rcutoff2);
2239 fscal = _mm_and_ps(fscal,cutoff_mask);
2241 fscal = _mm_andnot_ps(dummy_mask,fscal);
2243 /* Update vectorial force */
2244 fix1 = _mm_macc_ps(dx12,fscal,fix1);
2245 fiy1 = _mm_macc_ps(dy12,fscal,fiy1);
2246 fiz1 = _mm_macc_ps(dz12,fscal,fiz1);
2248 fjx2 = _mm_macc_ps(dx12,fscal,fjx2);
2249 fjy2 = _mm_macc_ps(dy12,fscal,fjy2);
2250 fjz2 = _mm_macc_ps(dz12,fscal,fjz2);
2254 /**************************
2255 * CALCULATE INTERACTIONS *
2256 **************************/
2258 if (gmx_mm_any_lt(rsq20,rcutoff2))
2261 r20 = _mm_mul_ps(rsq20,rinv20);
2262 r20 = _mm_andnot_ps(dummy_mask,r20);
2264 /* EWALD ELECTROSTATICS */
2266 /* Analytical PME correction */
2267 zeta2 = _mm_mul_ps(beta2,rsq20);
2268 rinv3 = _mm_mul_ps(rinvsq20,rinv20);
2269 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
2270 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
2271 felec = _mm_mul_ps(qq20,felec);
2273 cutoff_mask = _mm_cmplt_ps(rsq20,rcutoff2);
2277 fscal = _mm_and_ps(fscal,cutoff_mask);
2279 fscal = _mm_andnot_ps(dummy_mask,fscal);
2281 /* Update vectorial force */
2282 fix2 = _mm_macc_ps(dx20,fscal,fix2);
2283 fiy2 = _mm_macc_ps(dy20,fscal,fiy2);
2284 fiz2 = _mm_macc_ps(dz20,fscal,fiz2);
2286 fjx0 = _mm_macc_ps(dx20,fscal,fjx0);
2287 fjy0 = _mm_macc_ps(dy20,fscal,fjy0);
2288 fjz0 = _mm_macc_ps(dz20,fscal,fjz0);
2292 /**************************
2293 * CALCULATE INTERACTIONS *
2294 **************************/
2296 if (gmx_mm_any_lt(rsq21,rcutoff2))
2299 r21 = _mm_mul_ps(rsq21,rinv21);
2300 r21 = _mm_andnot_ps(dummy_mask,r21);
2302 /* EWALD ELECTROSTATICS */
2304 /* Analytical PME correction */
2305 zeta2 = _mm_mul_ps(beta2,rsq21);
2306 rinv3 = _mm_mul_ps(rinvsq21,rinv21);
2307 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
2308 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
2309 felec = _mm_mul_ps(qq21,felec);
2311 cutoff_mask = _mm_cmplt_ps(rsq21,rcutoff2);
2315 fscal = _mm_and_ps(fscal,cutoff_mask);
2317 fscal = _mm_andnot_ps(dummy_mask,fscal);
2319 /* Update vectorial force */
2320 fix2 = _mm_macc_ps(dx21,fscal,fix2);
2321 fiy2 = _mm_macc_ps(dy21,fscal,fiy2);
2322 fiz2 = _mm_macc_ps(dz21,fscal,fiz2);
2324 fjx1 = _mm_macc_ps(dx21,fscal,fjx1);
2325 fjy1 = _mm_macc_ps(dy21,fscal,fjy1);
2326 fjz1 = _mm_macc_ps(dz21,fscal,fjz1);
2330 /**************************
2331 * CALCULATE INTERACTIONS *
2332 **************************/
2334 if (gmx_mm_any_lt(rsq22,rcutoff2))
2337 r22 = _mm_mul_ps(rsq22,rinv22);
2338 r22 = _mm_andnot_ps(dummy_mask,r22);
2340 /* EWALD ELECTROSTATICS */
2342 /* Analytical PME correction */
2343 zeta2 = _mm_mul_ps(beta2,rsq22);
2344 rinv3 = _mm_mul_ps(rinvsq22,rinv22);
2345 pmecorrF = gmx_mm_pmecorrF_ps(zeta2);
2346 felec = _mm_macc_ps(pmecorrF,beta3,rinv3);
2347 felec = _mm_mul_ps(qq22,felec);
2349 cutoff_mask = _mm_cmplt_ps(rsq22,rcutoff2);
2353 fscal = _mm_and_ps(fscal,cutoff_mask);
2355 fscal = _mm_andnot_ps(dummy_mask,fscal);
2357 /* Update vectorial force */
2358 fix2 = _mm_macc_ps(dx22,fscal,fix2);
2359 fiy2 = _mm_macc_ps(dy22,fscal,fiy2);
2360 fiz2 = _mm_macc_ps(dz22,fscal,fiz2);
2362 fjx2 = _mm_macc_ps(dx22,fscal,fjx2);
2363 fjy2 = _mm_macc_ps(dy22,fscal,fjy2);
2364 fjz2 = _mm_macc_ps(dz22,fscal,fjz2);
2368 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
2369 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
2370 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
2371 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
2373 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
2374 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
2376 /* Inner loop uses 309 flops */
2379 /* End of innermost loop */
2381 gmx_mm_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
2382 f+i_coord_offset,fshift+i_shift_offset);
2384 /* Increment number of inner iterations */
2385 inneriter += j_index_end - j_index_start;
2387 /* Outer loop uses 18 flops */
2390 /* Increment number of outer iterations */
2393 /* Update outer/inner flops */
2395 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_F,outeriter*18 + inneriter*309);