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36 * Note: this file was generated by the GROMACS avx_128_fma_double kernel generator.
44 #include "../nb_kernel.h"
45 #include "types/simple.h"
49 #include "gromacs/simd/math_x86_avx_128_fma_double.h"
50 #include "kernelutil_x86_avx_128_fma_double.h"
53 * Gromacs nonbonded kernel: nb_kernel_ElecRFCut_VdwLJSw_GeomW3W3_VF_avx_128_fma_double
54 * Electrostatics interaction: ReactionField
55 * VdW interaction: LennardJones
56 * Geometry: Water3-Water3
57 * Calculate force/pot: PotentialAndForce
60 nb_kernel_ElecRFCut_VdwLJSw_GeomW3W3_VF_avx_128_fma_double
61 (t_nblist * gmx_restrict nlist,
62 rvec * gmx_restrict xx,
63 rvec * gmx_restrict ff,
64 t_forcerec * gmx_restrict fr,
65 t_mdatoms * gmx_restrict mdatoms,
66 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
67 t_nrnb * gmx_restrict nrnb)
69 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
70 * just 0 for non-waters.
71 * Suffixes A,B refer to j loop unrolling done with SSE double precision, e.g. for the two different
72 * jnr indices corresponding to data put in the four positions in the SIMD register.
74 int i_shift_offset,i_coord_offset,outeriter,inneriter;
75 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
77 int j_coord_offsetA,j_coord_offsetB;
78 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
80 real *shiftvec,*fshift,*x,*f;
81 __m128d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
83 __m128d ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
85 __m128d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
87 __m128d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
88 int vdwjidx0A,vdwjidx0B;
89 __m128d jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
90 int vdwjidx1A,vdwjidx1B;
91 __m128d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
92 int vdwjidx2A,vdwjidx2B;
93 __m128d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
94 __m128d dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
95 __m128d dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
96 __m128d dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
97 __m128d dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
98 __m128d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
99 __m128d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
100 __m128d dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
101 __m128d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
102 __m128d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
103 __m128d velec,felec,velecsum,facel,crf,krf,krf2;
106 __m128d rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
109 __m128d one_sixth = _mm_set1_pd(1.0/6.0);
110 __m128d one_twelfth = _mm_set1_pd(1.0/12.0);
111 __m128d rswitch,swV3,swV4,swV5,swF2,swF3,swF4,d,d2,sw,dsw;
112 real rswitch_scalar,d_scalar;
113 __m128d dummy_mask,cutoff_mask;
114 __m128d signbit = gmx_mm_castsi128_pd( _mm_set_epi32(0x80000000,0x00000000,0x80000000,0x00000000) );
115 __m128d one = _mm_set1_pd(1.0);
116 __m128d two = _mm_set1_pd(2.0);
122 jindex = nlist->jindex;
124 shiftidx = nlist->shift;
126 shiftvec = fr->shift_vec[0];
127 fshift = fr->fshift[0];
128 facel = _mm_set1_pd(fr->epsfac);
129 charge = mdatoms->chargeA;
130 krf = _mm_set1_pd(fr->ic->k_rf);
131 krf2 = _mm_set1_pd(fr->ic->k_rf*2.0);
132 crf = _mm_set1_pd(fr->ic->c_rf);
133 nvdwtype = fr->ntype;
135 vdwtype = mdatoms->typeA;
137 /* Setup water-specific parameters */
138 inr = nlist->iinr[0];
139 iq0 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+0]));
140 iq1 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+1]));
141 iq2 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+2]));
142 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
144 jq0 = _mm_set1_pd(charge[inr+0]);
145 jq1 = _mm_set1_pd(charge[inr+1]);
146 jq2 = _mm_set1_pd(charge[inr+2]);
147 vdwjidx0A = 2*vdwtype[inr+0];
148 qq00 = _mm_mul_pd(iq0,jq0);
149 c6_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A]);
150 c12_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A+1]);
151 qq01 = _mm_mul_pd(iq0,jq1);
152 qq02 = _mm_mul_pd(iq0,jq2);
153 qq10 = _mm_mul_pd(iq1,jq0);
154 qq11 = _mm_mul_pd(iq1,jq1);
155 qq12 = _mm_mul_pd(iq1,jq2);
156 qq20 = _mm_mul_pd(iq2,jq0);
157 qq21 = _mm_mul_pd(iq2,jq1);
158 qq22 = _mm_mul_pd(iq2,jq2);
160 /* When we use explicit cutoffs the value must be identical for elec and VdW, so use elec as an arbitrary choice */
161 rcutoff_scalar = fr->rcoulomb;
162 rcutoff = _mm_set1_pd(rcutoff_scalar);
163 rcutoff2 = _mm_mul_pd(rcutoff,rcutoff);
165 rswitch_scalar = fr->rvdw_switch;
166 rswitch = _mm_set1_pd(rswitch_scalar);
167 /* Setup switch parameters */
168 d_scalar = rcutoff_scalar-rswitch_scalar;
169 d = _mm_set1_pd(d_scalar);
170 swV3 = _mm_set1_pd(-10.0/(d_scalar*d_scalar*d_scalar));
171 swV4 = _mm_set1_pd( 15.0/(d_scalar*d_scalar*d_scalar*d_scalar));
172 swV5 = _mm_set1_pd( -6.0/(d_scalar*d_scalar*d_scalar*d_scalar*d_scalar));
173 swF2 = _mm_set1_pd(-30.0/(d_scalar*d_scalar*d_scalar));
174 swF3 = _mm_set1_pd( 60.0/(d_scalar*d_scalar*d_scalar*d_scalar));
175 swF4 = _mm_set1_pd(-30.0/(d_scalar*d_scalar*d_scalar*d_scalar*d_scalar));
177 /* Avoid stupid compiler warnings */
185 /* Start outer loop over neighborlists */
186 for(iidx=0; iidx<nri; iidx++)
188 /* Load shift vector for this list */
189 i_shift_offset = DIM*shiftidx[iidx];
191 /* Load limits for loop over neighbors */
192 j_index_start = jindex[iidx];
193 j_index_end = jindex[iidx+1];
195 /* Get outer coordinate index */
197 i_coord_offset = DIM*inr;
199 /* Load i particle coords and add shift vector */
200 gmx_mm_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset,
201 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
203 fix0 = _mm_setzero_pd();
204 fiy0 = _mm_setzero_pd();
205 fiz0 = _mm_setzero_pd();
206 fix1 = _mm_setzero_pd();
207 fiy1 = _mm_setzero_pd();
208 fiz1 = _mm_setzero_pd();
209 fix2 = _mm_setzero_pd();
210 fiy2 = _mm_setzero_pd();
211 fiz2 = _mm_setzero_pd();
213 /* Reset potential sums */
214 velecsum = _mm_setzero_pd();
215 vvdwsum = _mm_setzero_pd();
217 /* Start inner kernel loop */
218 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
221 /* Get j neighbor index, and coordinate index */
224 j_coord_offsetA = DIM*jnrA;
225 j_coord_offsetB = DIM*jnrB;
227 /* load j atom coordinates */
228 gmx_mm_load_3rvec_2ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
229 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
231 /* Calculate displacement vector */
232 dx00 = _mm_sub_pd(ix0,jx0);
233 dy00 = _mm_sub_pd(iy0,jy0);
234 dz00 = _mm_sub_pd(iz0,jz0);
235 dx01 = _mm_sub_pd(ix0,jx1);
236 dy01 = _mm_sub_pd(iy0,jy1);
237 dz01 = _mm_sub_pd(iz0,jz1);
238 dx02 = _mm_sub_pd(ix0,jx2);
239 dy02 = _mm_sub_pd(iy0,jy2);
240 dz02 = _mm_sub_pd(iz0,jz2);
241 dx10 = _mm_sub_pd(ix1,jx0);
242 dy10 = _mm_sub_pd(iy1,jy0);
243 dz10 = _mm_sub_pd(iz1,jz0);
244 dx11 = _mm_sub_pd(ix1,jx1);
245 dy11 = _mm_sub_pd(iy1,jy1);
246 dz11 = _mm_sub_pd(iz1,jz1);
247 dx12 = _mm_sub_pd(ix1,jx2);
248 dy12 = _mm_sub_pd(iy1,jy2);
249 dz12 = _mm_sub_pd(iz1,jz2);
250 dx20 = _mm_sub_pd(ix2,jx0);
251 dy20 = _mm_sub_pd(iy2,jy0);
252 dz20 = _mm_sub_pd(iz2,jz0);
253 dx21 = _mm_sub_pd(ix2,jx1);
254 dy21 = _mm_sub_pd(iy2,jy1);
255 dz21 = _mm_sub_pd(iz2,jz1);
256 dx22 = _mm_sub_pd(ix2,jx2);
257 dy22 = _mm_sub_pd(iy2,jy2);
258 dz22 = _mm_sub_pd(iz2,jz2);
260 /* Calculate squared distance and things based on it */
261 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
262 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
263 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
264 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
265 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
266 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
267 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
268 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
269 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
271 rinv00 = gmx_mm_invsqrt_pd(rsq00);
272 rinv01 = gmx_mm_invsqrt_pd(rsq01);
273 rinv02 = gmx_mm_invsqrt_pd(rsq02);
274 rinv10 = gmx_mm_invsqrt_pd(rsq10);
275 rinv11 = gmx_mm_invsqrt_pd(rsq11);
276 rinv12 = gmx_mm_invsqrt_pd(rsq12);
277 rinv20 = gmx_mm_invsqrt_pd(rsq20);
278 rinv21 = gmx_mm_invsqrt_pd(rsq21);
279 rinv22 = gmx_mm_invsqrt_pd(rsq22);
281 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
282 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
283 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
284 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
285 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
286 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
287 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
288 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
289 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
291 fjx0 = _mm_setzero_pd();
292 fjy0 = _mm_setzero_pd();
293 fjz0 = _mm_setzero_pd();
294 fjx1 = _mm_setzero_pd();
295 fjy1 = _mm_setzero_pd();
296 fjz1 = _mm_setzero_pd();
297 fjx2 = _mm_setzero_pd();
298 fjy2 = _mm_setzero_pd();
299 fjz2 = _mm_setzero_pd();
301 /**************************
302 * CALCULATE INTERACTIONS *
303 **************************/
305 if (gmx_mm_any_lt(rsq00,rcutoff2))
308 r00 = _mm_mul_pd(rsq00,rinv00);
310 /* REACTION-FIELD ELECTROSTATICS */
311 velec = _mm_mul_pd(qq00,_mm_sub_pd(_mm_macc_pd(krf,rsq00,rinv00),crf));
312 felec = _mm_mul_pd(qq00,_mm_msub_pd(rinv00,rinvsq00,krf2));
314 /* LENNARD-JONES DISPERSION/REPULSION */
316 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
317 vvdw6 = _mm_mul_pd(c6_00,rinvsix);
318 vvdw12 = _mm_mul_pd(c12_00,_mm_mul_pd(rinvsix,rinvsix));
319 vvdw = _mm_msub_pd( vvdw12,one_twelfth, _mm_mul_pd(vvdw6,one_sixth) );
320 fvdw = _mm_mul_pd(_mm_sub_pd(vvdw12,vvdw6),rinvsq00);
322 d = _mm_sub_pd(r00,rswitch);
323 d = _mm_max_pd(d,_mm_setzero_pd());
324 d2 = _mm_mul_pd(d,d);
325 sw = _mm_add_pd(one,_mm_mul_pd(d2,_mm_mul_pd(d,_mm_macc_pd(d,_mm_macc_pd(d,swV5,swV4),swV3))));
327 dsw = _mm_mul_pd(d2,_mm_macc_pd(d,_mm_macc_pd(d,swF4,swF3),swF2));
329 /* Evaluate switch function */
330 /* fscal'=f'/r=-(v*sw)'/r=-(v'*sw+v*dsw)/r=-v'*sw/r-v*dsw/r=fscal*sw-v*dsw/r */
331 fvdw = _mm_msub_pd( fvdw,sw , _mm_mul_pd(rinv00,_mm_mul_pd(vvdw,dsw)) );
332 vvdw = _mm_mul_pd(vvdw,sw);
333 cutoff_mask = _mm_cmplt_pd(rsq00,rcutoff2);
335 /* Update potential sum for this i atom from the interaction with this j atom. */
336 velec = _mm_and_pd(velec,cutoff_mask);
337 velecsum = _mm_add_pd(velecsum,velec);
338 vvdw = _mm_and_pd(vvdw,cutoff_mask);
339 vvdwsum = _mm_add_pd(vvdwsum,vvdw);
341 fscal = _mm_add_pd(felec,fvdw);
343 fscal = _mm_and_pd(fscal,cutoff_mask);
345 /* Update vectorial force */
346 fix0 = _mm_macc_pd(dx00,fscal,fix0);
347 fiy0 = _mm_macc_pd(dy00,fscal,fiy0);
348 fiz0 = _mm_macc_pd(dz00,fscal,fiz0);
350 fjx0 = _mm_macc_pd(dx00,fscal,fjx0);
351 fjy0 = _mm_macc_pd(dy00,fscal,fjy0);
352 fjz0 = _mm_macc_pd(dz00,fscal,fjz0);
356 /**************************
357 * CALCULATE INTERACTIONS *
358 **************************/
360 if (gmx_mm_any_lt(rsq01,rcutoff2))
363 /* REACTION-FIELD ELECTROSTATICS */
364 velec = _mm_mul_pd(qq01,_mm_sub_pd(_mm_macc_pd(krf,rsq01,rinv01),crf));
365 felec = _mm_mul_pd(qq01,_mm_msub_pd(rinv01,rinvsq01,krf2));
367 cutoff_mask = _mm_cmplt_pd(rsq01,rcutoff2);
369 /* Update potential sum for this i atom from the interaction with this j atom. */
370 velec = _mm_and_pd(velec,cutoff_mask);
371 velecsum = _mm_add_pd(velecsum,velec);
375 fscal = _mm_and_pd(fscal,cutoff_mask);
377 /* Update vectorial force */
378 fix0 = _mm_macc_pd(dx01,fscal,fix0);
379 fiy0 = _mm_macc_pd(dy01,fscal,fiy0);
380 fiz0 = _mm_macc_pd(dz01,fscal,fiz0);
382 fjx1 = _mm_macc_pd(dx01,fscal,fjx1);
383 fjy1 = _mm_macc_pd(dy01,fscal,fjy1);
384 fjz1 = _mm_macc_pd(dz01,fscal,fjz1);
388 /**************************
389 * CALCULATE INTERACTIONS *
390 **************************/
392 if (gmx_mm_any_lt(rsq02,rcutoff2))
395 /* REACTION-FIELD ELECTROSTATICS */
396 velec = _mm_mul_pd(qq02,_mm_sub_pd(_mm_macc_pd(krf,rsq02,rinv02),crf));
397 felec = _mm_mul_pd(qq02,_mm_msub_pd(rinv02,rinvsq02,krf2));
399 cutoff_mask = _mm_cmplt_pd(rsq02,rcutoff2);
401 /* Update potential sum for this i atom from the interaction with this j atom. */
402 velec = _mm_and_pd(velec,cutoff_mask);
403 velecsum = _mm_add_pd(velecsum,velec);
407 fscal = _mm_and_pd(fscal,cutoff_mask);
409 /* Update vectorial force */
410 fix0 = _mm_macc_pd(dx02,fscal,fix0);
411 fiy0 = _mm_macc_pd(dy02,fscal,fiy0);
412 fiz0 = _mm_macc_pd(dz02,fscal,fiz0);
414 fjx2 = _mm_macc_pd(dx02,fscal,fjx2);
415 fjy2 = _mm_macc_pd(dy02,fscal,fjy2);
416 fjz2 = _mm_macc_pd(dz02,fscal,fjz2);
420 /**************************
421 * CALCULATE INTERACTIONS *
422 **************************/
424 if (gmx_mm_any_lt(rsq10,rcutoff2))
427 /* REACTION-FIELD ELECTROSTATICS */
428 velec = _mm_mul_pd(qq10,_mm_sub_pd(_mm_macc_pd(krf,rsq10,rinv10),crf));
429 felec = _mm_mul_pd(qq10,_mm_msub_pd(rinv10,rinvsq10,krf2));
431 cutoff_mask = _mm_cmplt_pd(rsq10,rcutoff2);
433 /* Update potential sum for this i atom from the interaction with this j atom. */
434 velec = _mm_and_pd(velec,cutoff_mask);
435 velecsum = _mm_add_pd(velecsum,velec);
439 fscal = _mm_and_pd(fscal,cutoff_mask);
441 /* Update vectorial force */
442 fix1 = _mm_macc_pd(dx10,fscal,fix1);
443 fiy1 = _mm_macc_pd(dy10,fscal,fiy1);
444 fiz1 = _mm_macc_pd(dz10,fscal,fiz1);
446 fjx0 = _mm_macc_pd(dx10,fscal,fjx0);
447 fjy0 = _mm_macc_pd(dy10,fscal,fjy0);
448 fjz0 = _mm_macc_pd(dz10,fscal,fjz0);
452 /**************************
453 * CALCULATE INTERACTIONS *
454 **************************/
456 if (gmx_mm_any_lt(rsq11,rcutoff2))
459 /* REACTION-FIELD ELECTROSTATICS */
460 velec = _mm_mul_pd(qq11,_mm_sub_pd(_mm_macc_pd(krf,rsq11,rinv11),crf));
461 felec = _mm_mul_pd(qq11,_mm_msub_pd(rinv11,rinvsq11,krf2));
463 cutoff_mask = _mm_cmplt_pd(rsq11,rcutoff2);
465 /* Update potential sum for this i atom from the interaction with this j atom. */
466 velec = _mm_and_pd(velec,cutoff_mask);
467 velecsum = _mm_add_pd(velecsum,velec);
471 fscal = _mm_and_pd(fscal,cutoff_mask);
473 /* Update vectorial force */
474 fix1 = _mm_macc_pd(dx11,fscal,fix1);
475 fiy1 = _mm_macc_pd(dy11,fscal,fiy1);
476 fiz1 = _mm_macc_pd(dz11,fscal,fiz1);
478 fjx1 = _mm_macc_pd(dx11,fscal,fjx1);
479 fjy1 = _mm_macc_pd(dy11,fscal,fjy1);
480 fjz1 = _mm_macc_pd(dz11,fscal,fjz1);
484 /**************************
485 * CALCULATE INTERACTIONS *
486 **************************/
488 if (gmx_mm_any_lt(rsq12,rcutoff2))
491 /* REACTION-FIELD ELECTROSTATICS */
492 velec = _mm_mul_pd(qq12,_mm_sub_pd(_mm_macc_pd(krf,rsq12,rinv12),crf));
493 felec = _mm_mul_pd(qq12,_mm_msub_pd(rinv12,rinvsq12,krf2));
495 cutoff_mask = _mm_cmplt_pd(rsq12,rcutoff2);
497 /* Update potential sum for this i atom from the interaction with this j atom. */
498 velec = _mm_and_pd(velec,cutoff_mask);
499 velecsum = _mm_add_pd(velecsum,velec);
503 fscal = _mm_and_pd(fscal,cutoff_mask);
505 /* Update vectorial force */
506 fix1 = _mm_macc_pd(dx12,fscal,fix1);
507 fiy1 = _mm_macc_pd(dy12,fscal,fiy1);
508 fiz1 = _mm_macc_pd(dz12,fscal,fiz1);
510 fjx2 = _mm_macc_pd(dx12,fscal,fjx2);
511 fjy2 = _mm_macc_pd(dy12,fscal,fjy2);
512 fjz2 = _mm_macc_pd(dz12,fscal,fjz2);
516 /**************************
517 * CALCULATE INTERACTIONS *
518 **************************/
520 if (gmx_mm_any_lt(rsq20,rcutoff2))
523 /* REACTION-FIELD ELECTROSTATICS */
524 velec = _mm_mul_pd(qq20,_mm_sub_pd(_mm_macc_pd(krf,rsq20,rinv20),crf));
525 felec = _mm_mul_pd(qq20,_mm_msub_pd(rinv20,rinvsq20,krf2));
527 cutoff_mask = _mm_cmplt_pd(rsq20,rcutoff2);
529 /* Update potential sum for this i atom from the interaction with this j atom. */
530 velec = _mm_and_pd(velec,cutoff_mask);
531 velecsum = _mm_add_pd(velecsum,velec);
535 fscal = _mm_and_pd(fscal,cutoff_mask);
537 /* Update vectorial force */
538 fix2 = _mm_macc_pd(dx20,fscal,fix2);
539 fiy2 = _mm_macc_pd(dy20,fscal,fiy2);
540 fiz2 = _mm_macc_pd(dz20,fscal,fiz2);
542 fjx0 = _mm_macc_pd(dx20,fscal,fjx0);
543 fjy0 = _mm_macc_pd(dy20,fscal,fjy0);
544 fjz0 = _mm_macc_pd(dz20,fscal,fjz0);
548 /**************************
549 * CALCULATE INTERACTIONS *
550 **************************/
552 if (gmx_mm_any_lt(rsq21,rcutoff2))
555 /* REACTION-FIELD ELECTROSTATICS */
556 velec = _mm_mul_pd(qq21,_mm_sub_pd(_mm_macc_pd(krf,rsq21,rinv21),crf));
557 felec = _mm_mul_pd(qq21,_mm_msub_pd(rinv21,rinvsq21,krf2));
559 cutoff_mask = _mm_cmplt_pd(rsq21,rcutoff2);
561 /* Update potential sum for this i atom from the interaction with this j atom. */
562 velec = _mm_and_pd(velec,cutoff_mask);
563 velecsum = _mm_add_pd(velecsum,velec);
567 fscal = _mm_and_pd(fscal,cutoff_mask);
569 /* Update vectorial force */
570 fix2 = _mm_macc_pd(dx21,fscal,fix2);
571 fiy2 = _mm_macc_pd(dy21,fscal,fiy2);
572 fiz2 = _mm_macc_pd(dz21,fscal,fiz2);
574 fjx1 = _mm_macc_pd(dx21,fscal,fjx1);
575 fjy1 = _mm_macc_pd(dy21,fscal,fjy1);
576 fjz1 = _mm_macc_pd(dz21,fscal,fjz1);
580 /**************************
581 * CALCULATE INTERACTIONS *
582 **************************/
584 if (gmx_mm_any_lt(rsq22,rcutoff2))
587 /* REACTION-FIELD ELECTROSTATICS */
588 velec = _mm_mul_pd(qq22,_mm_sub_pd(_mm_macc_pd(krf,rsq22,rinv22),crf));
589 felec = _mm_mul_pd(qq22,_mm_msub_pd(rinv22,rinvsq22,krf2));
591 cutoff_mask = _mm_cmplt_pd(rsq22,rcutoff2);
593 /* Update potential sum for this i atom from the interaction with this j atom. */
594 velec = _mm_and_pd(velec,cutoff_mask);
595 velecsum = _mm_add_pd(velecsum,velec);
599 fscal = _mm_and_pd(fscal,cutoff_mask);
601 /* Update vectorial force */
602 fix2 = _mm_macc_pd(dx22,fscal,fix2);
603 fiy2 = _mm_macc_pd(dy22,fscal,fiy2);
604 fiz2 = _mm_macc_pd(dz22,fscal,fiz2);
606 fjx2 = _mm_macc_pd(dx22,fscal,fjx2);
607 fjy2 = _mm_macc_pd(dy22,fscal,fjy2);
608 fjz2 = _mm_macc_pd(dz22,fscal,fjz2);
612 gmx_mm_decrement_3rvec_2ptr_swizzle_pd(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
614 /* Inner loop uses 385 flops */
621 j_coord_offsetA = DIM*jnrA;
623 /* load j atom coordinates */
624 gmx_mm_load_3rvec_1ptr_swizzle_pd(x+j_coord_offsetA,
625 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
627 /* Calculate displacement vector */
628 dx00 = _mm_sub_pd(ix0,jx0);
629 dy00 = _mm_sub_pd(iy0,jy0);
630 dz00 = _mm_sub_pd(iz0,jz0);
631 dx01 = _mm_sub_pd(ix0,jx1);
632 dy01 = _mm_sub_pd(iy0,jy1);
633 dz01 = _mm_sub_pd(iz0,jz1);
634 dx02 = _mm_sub_pd(ix0,jx2);
635 dy02 = _mm_sub_pd(iy0,jy2);
636 dz02 = _mm_sub_pd(iz0,jz2);
637 dx10 = _mm_sub_pd(ix1,jx0);
638 dy10 = _mm_sub_pd(iy1,jy0);
639 dz10 = _mm_sub_pd(iz1,jz0);
640 dx11 = _mm_sub_pd(ix1,jx1);
641 dy11 = _mm_sub_pd(iy1,jy1);
642 dz11 = _mm_sub_pd(iz1,jz1);
643 dx12 = _mm_sub_pd(ix1,jx2);
644 dy12 = _mm_sub_pd(iy1,jy2);
645 dz12 = _mm_sub_pd(iz1,jz2);
646 dx20 = _mm_sub_pd(ix2,jx0);
647 dy20 = _mm_sub_pd(iy2,jy0);
648 dz20 = _mm_sub_pd(iz2,jz0);
649 dx21 = _mm_sub_pd(ix2,jx1);
650 dy21 = _mm_sub_pd(iy2,jy1);
651 dz21 = _mm_sub_pd(iz2,jz1);
652 dx22 = _mm_sub_pd(ix2,jx2);
653 dy22 = _mm_sub_pd(iy2,jy2);
654 dz22 = _mm_sub_pd(iz2,jz2);
656 /* Calculate squared distance and things based on it */
657 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
658 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
659 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
660 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
661 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
662 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
663 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
664 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
665 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
667 rinv00 = gmx_mm_invsqrt_pd(rsq00);
668 rinv01 = gmx_mm_invsqrt_pd(rsq01);
669 rinv02 = gmx_mm_invsqrt_pd(rsq02);
670 rinv10 = gmx_mm_invsqrt_pd(rsq10);
671 rinv11 = gmx_mm_invsqrt_pd(rsq11);
672 rinv12 = gmx_mm_invsqrt_pd(rsq12);
673 rinv20 = gmx_mm_invsqrt_pd(rsq20);
674 rinv21 = gmx_mm_invsqrt_pd(rsq21);
675 rinv22 = gmx_mm_invsqrt_pd(rsq22);
677 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
678 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
679 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
680 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
681 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
682 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
683 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
684 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
685 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
687 fjx0 = _mm_setzero_pd();
688 fjy0 = _mm_setzero_pd();
689 fjz0 = _mm_setzero_pd();
690 fjx1 = _mm_setzero_pd();
691 fjy1 = _mm_setzero_pd();
692 fjz1 = _mm_setzero_pd();
693 fjx2 = _mm_setzero_pd();
694 fjy2 = _mm_setzero_pd();
695 fjz2 = _mm_setzero_pd();
697 /**************************
698 * CALCULATE INTERACTIONS *
699 **************************/
701 if (gmx_mm_any_lt(rsq00,rcutoff2))
704 r00 = _mm_mul_pd(rsq00,rinv00);
706 /* REACTION-FIELD ELECTROSTATICS */
707 velec = _mm_mul_pd(qq00,_mm_sub_pd(_mm_macc_pd(krf,rsq00,rinv00),crf));
708 felec = _mm_mul_pd(qq00,_mm_msub_pd(rinv00,rinvsq00,krf2));
710 /* LENNARD-JONES DISPERSION/REPULSION */
712 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
713 vvdw6 = _mm_mul_pd(c6_00,rinvsix);
714 vvdw12 = _mm_mul_pd(c12_00,_mm_mul_pd(rinvsix,rinvsix));
715 vvdw = _mm_msub_pd( vvdw12,one_twelfth, _mm_mul_pd(vvdw6,one_sixth) );
716 fvdw = _mm_mul_pd(_mm_sub_pd(vvdw12,vvdw6),rinvsq00);
718 d = _mm_sub_pd(r00,rswitch);
719 d = _mm_max_pd(d,_mm_setzero_pd());
720 d2 = _mm_mul_pd(d,d);
721 sw = _mm_add_pd(one,_mm_mul_pd(d2,_mm_mul_pd(d,_mm_macc_pd(d,_mm_macc_pd(d,swV5,swV4),swV3))));
723 dsw = _mm_mul_pd(d2,_mm_macc_pd(d,_mm_macc_pd(d,swF4,swF3),swF2));
725 /* Evaluate switch function */
726 /* fscal'=f'/r=-(v*sw)'/r=-(v'*sw+v*dsw)/r=-v'*sw/r-v*dsw/r=fscal*sw-v*dsw/r */
727 fvdw = _mm_msub_pd( fvdw,sw , _mm_mul_pd(rinv00,_mm_mul_pd(vvdw,dsw)) );
728 vvdw = _mm_mul_pd(vvdw,sw);
729 cutoff_mask = _mm_cmplt_pd(rsq00,rcutoff2);
731 /* Update potential sum for this i atom from the interaction with this j atom. */
732 velec = _mm_and_pd(velec,cutoff_mask);
733 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
734 velecsum = _mm_add_pd(velecsum,velec);
735 vvdw = _mm_and_pd(vvdw,cutoff_mask);
736 vvdw = _mm_unpacklo_pd(vvdw,_mm_setzero_pd());
737 vvdwsum = _mm_add_pd(vvdwsum,vvdw);
739 fscal = _mm_add_pd(felec,fvdw);
741 fscal = _mm_and_pd(fscal,cutoff_mask);
743 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
745 /* Update vectorial force */
746 fix0 = _mm_macc_pd(dx00,fscal,fix0);
747 fiy0 = _mm_macc_pd(dy00,fscal,fiy0);
748 fiz0 = _mm_macc_pd(dz00,fscal,fiz0);
750 fjx0 = _mm_macc_pd(dx00,fscal,fjx0);
751 fjy0 = _mm_macc_pd(dy00,fscal,fjy0);
752 fjz0 = _mm_macc_pd(dz00,fscal,fjz0);
756 /**************************
757 * CALCULATE INTERACTIONS *
758 **************************/
760 if (gmx_mm_any_lt(rsq01,rcutoff2))
763 /* REACTION-FIELD ELECTROSTATICS */
764 velec = _mm_mul_pd(qq01,_mm_sub_pd(_mm_macc_pd(krf,rsq01,rinv01),crf));
765 felec = _mm_mul_pd(qq01,_mm_msub_pd(rinv01,rinvsq01,krf2));
767 cutoff_mask = _mm_cmplt_pd(rsq01,rcutoff2);
769 /* Update potential sum for this i atom from the interaction with this j atom. */
770 velec = _mm_and_pd(velec,cutoff_mask);
771 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
772 velecsum = _mm_add_pd(velecsum,velec);
776 fscal = _mm_and_pd(fscal,cutoff_mask);
778 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
780 /* Update vectorial force */
781 fix0 = _mm_macc_pd(dx01,fscal,fix0);
782 fiy0 = _mm_macc_pd(dy01,fscal,fiy0);
783 fiz0 = _mm_macc_pd(dz01,fscal,fiz0);
785 fjx1 = _mm_macc_pd(dx01,fscal,fjx1);
786 fjy1 = _mm_macc_pd(dy01,fscal,fjy1);
787 fjz1 = _mm_macc_pd(dz01,fscal,fjz1);
791 /**************************
792 * CALCULATE INTERACTIONS *
793 **************************/
795 if (gmx_mm_any_lt(rsq02,rcutoff2))
798 /* REACTION-FIELD ELECTROSTATICS */
799 velec = _mm_mul_pd(qq02,_mm_sub_pd(_mm_macc_pd(krf,rsq02,rinv02),crf));
800 felec = _mm_mul_pd(qq02,_mm_msub_pd(rinv02,rinvsq02,krf2));
802 cutoff_mask = _mm_cmplt_pd(rsq02,rcutoff2);
804 /* Update potential sum for this i atom from the interaction with this j atom. */
805 velec = _mm_and_pd(velec,cutoff_mask);
806 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
807 velecsum = _mm_add_pd(velecsum,velec);
811 fscal = _mm_and_pd(fscal,cutoff_mask);
813 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
815 /* Update vectorial force */
816 fix0 = _mm_macc_pd(dx02,fscal,fix0);
817 fiy0 = _mm_macc_pd(dy02,fscal,fiy0);
818 fiz0 = _mm_macc_pd(dz02,fscal,fiz0);
820 fjx2 = _mm_macc_pd(dx02,fscal,fjx2);
821 fjy2 = _mm_macc_pd(dy02,fscal,fjy2);
822 fjz2 = _mm_macc_pd(dz02,fscal,fjz2);
826 /**************************
827 * CALCULATE INTERACTIONS *
828 **************************/
830 if (gmx_mm_any_lt(rsq10,rcutoff2))
833 /* REACTION-FIELD ELECTROSTATICS */
834 velec = _mm_mul_pd(qq10,_mm_sub_pd(_mm_macc_pd(krf,rsq10,rinv10),crf));
835 felec = _mm_mul_pd(qq10,_mm_msub_pd(rinv10,rinvsq10,krf2));
837 cutoff_mask = _mm_cmplt_pd(rsq10,rcutoff2);
839 /* Update potential sum for this i atom from the interaction with this j atom. */
840 velec = _mm_and_pd(velec,cutoff_mask);
841 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
842 velecsum = _mm_add_pd(velecsum,velec);
846 fscal = _mm_and_pd(fscal,cutoff_mask);
848 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
850 /* Update vectorial force */
851 fix1 = _mm_macc_pd(dx10,fscal,fix1);
852 fiy1 = _mm_macc_pd(dy10,fscal,fiy1);
853 fiz1 = _mm_macc_pd(dz10,fscal,fiz1);
855 fjx0 = _mm_macc_pd(dx10,fscal,fjx0);
856 fjy0 = _mm_macc_pd(dy10,fscal,fjy0);
857 fjz0 = _mm_macc_pd(dz10,fscal,fjz0);
861 /**************************
862 * CALCULATE INTERACTIONS *
863 **************************/
865 if (gmx_mm_any_lt(rsq11,rcutoff2))
868 /* REACTION-FIELD ELECTROSTATICS */
869 velec = _mm_mul_pd(qq11,_mm_sub_pd(_mm_macc_pd(krf,rsq11,rinv11),crf));
870 felec = _mm_mul_pd(qq11,_mm_msub_pd(rinv11,rinvsq11,krf2));
872 cutoff_mask = _mm_cmplt_pd(rsq11,rcutoff2);
874 /* Update potential sum for this i atom from the interaction with this j atom. */
875 velec = _mm_and_pd(velec,cutoff_mask);
876 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
877 velecsum = _mm_add_pd(velecsum,velec);
881 fscal = _mm_and_pd(fscal,cutoff_mask);
883 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
885 /* Update vectorial force */
886 fix1 = _mm_macc_pd(dx11,fscal,fix1);
887 fiy1 = _mm_macc_pd(dy11,fscal,fiy1);
888 fiz1 = _mm_macc_pd(dz11,fscal,fiz1);
890 fjx1 = _mm_macc_pd(dx11,fscal,fjx1);
891 fjy1 = _mm_macc_pd(dy11,fscal,fjy1);
892 fjz1 = _mm_macc_pd(dz11,fscal,fjz1);
896 /**************************
897 * CALCULATE INTERACTIONS *
898 **************************/
900 if (gmx_mm_any_lt(rsq12,rcutoff2))
903 /* REACTION-FIELD ELECTROSTATICS */
904 velec = _mm_mul_pd(qq12,_mm_sub_pd(_mm_macc_pd(krf,rsq12,rinv12),crf));
905 felec = _mm_mul_pd(qq12,_mm_msub_pd(rinv12,rinvsq12,krf2));
907 cutoff_mask = _mm_cmplt_pd(rsq12,rcutoff2);
909 /* Update potential sum for this i atom from the interaction with this j atom. */
910 velec = _mm_and_pd(velec,cutoff_mask);
911 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
912 velecsum = _mm_add_pd(velecsum,velec);
916 fscal = _mm_and_pd(fscal,cutoff_mask);
918 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
920 /* Update vectorial force */
921 fix1 = _mm_macc_pd(dx12,fscal,fix1);
922 fiy1 = _mm_macc_pd(dy12,fscal,fiy1);
923 fiz1 = _mm_macc_pd(dz12,fscal,fiz1);
925 fjx2 = _mm_macc_pd(dx12,fscal,fjx2);
926 fjy2 = _mm_macc_pd(dy12,fscal,fjy2);
927 fjz2 = _mm_macc_pd(dz12,fscal,fjz2);
931 /**************************
932 * CALCULATE INTERACTIONS *
933 **************************/
935 if (gmx_mm_any_lt(rsq20,rcutoff2))
938 /* REACTION-FIELD ELECTROSTATICS */
939 velec = _mm_mul_pd(qq20,_mm_sub_pd(_mm_macc_pd(krf,rsq20,rinv20),crf));
940 felec = _mm_mul_pd(qq20,_mm_msub_pd(rinv20,rinvsq20,krf2));
942 cutoff_mask = _mm_cmplt_pd(rsq20,rcutoff2);
944 /* Update potential sum for this i atom from the interaction with this j atom. */
945 velec = _mm_and_pd(velec,cutoff_mask);
946 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
947 velecsum = _mm_add_pd(velecsum,velec);
951 fscal = _mm_and_pd(fscal,cutoff_mask);
953 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
955 /* Update vectorial force */
956 fix2 = _mm_macc_pd(dx20,fscal,fix2);
957 fiy2 = _mm_macc_pd(dy20,fscal,fiy2);
958 fiz2 = _mm_macc_pd(dz20,fscal,fiz2);
960 fjx0 = _mm_macc_pd(dx20,fscal,fjx0);
961 fjy0 = _mm_macc_pd(dy20,fscal,fjy0);
962 fjz0 = _mm_macc_pd(dz20,fscal,fjz0);
966 /**************************
967 * CALCULATE INTERACTIONS *
968 **************************/
970 if (gmx_mm_any_lt(rsq21,rcutoff2))
973 /* REACTION-FIELD ELECTROSTATICS */
974 velec = _mm_mul_pd(qq21,_mm_sub_pd(_mm_macc_pd(krf,rsq21,rinv21),crf));
975 felec = _mm_mul_pd(qq21,_mm_msub_pd(rinv21,rinvsq21,krf2));
977 cutoff_mask = _mm_cmplt_pd(rsq21,rcutoff2);
979 /* Update potential sum for this i atom from the interaction with this j atom. */
980 velec = _mm_and_pd(velec,cutoff_mask);
981 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
982 velecsum = _mm_add_pd(velecsum,velec);
986 fscal = _mm_and_pd(fscal,cutoff_mask);
988 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
990 /* Update vectorial force */
991 fix2 = _mm_macc_pd(dx21,fscal,fix2);
992 fiy2 = _mm_macc_pd(dy21,fscal,fiy2);
993 fiz2 = _mm_macc_pd(dz21,fscal,fiz2);
995 fjx1 = _mm_macc_pd(dx21,fscal,fjx1);
996 fjy1 = _mm_macc_pd(dy21,fscal,fjy1);
997 fjz1 = _mm_macc_pd(dz21,fscal,fjz1);
1001 /**************************
1002 * CALCULATE INTERACTIONS *
1003 **************************/
1005 if (gmx_mm_any_lt(rsq22,rcutoff2))
1008 /* REACTION-FIELD ELECTROSTATICS */
1009 velec = _mm_mul_pd(qq22,_mm_sub_pd(_mm_macc_pd(krf,rsq22,rinv22),crf));
1010 felec = _mm_mul_pd(qq22,_mm_msub_pd(rinv22,rinvsq22,krf2));
1012 cutoff_mask = _mm_cmplt_pd(rsq22,rcutoff2);
1014 /* Update potential sum for this i atom from the interaction with this j atom. */
1015 velec = _mm_and_pd(velec,cutoff_mask);
1016 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
1017 velecsum = _mm_add_pd(velecsum,velec);
1021 fscal = _mm_and_pd(fscal,cutoff_mask);
1023 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1025 /* Update vectorial force */
1026 fix2 = _mm_macc_pd(dx22,fscal,fix2);
1027 fiy2 = _mm_macc_pd(dy22,fscal,fiy2);
1028 fiz2 = _mm_macc_pd(dz22,fscal,fiz2);
1030 fjx2 = _mm_macc_pd(dx22,fscal,fjx2);
1031 fjy2 = _mm_macc_pd(dy22,fscal,fjy2);
1032 fjz2 = _mm_macc_pd(dz22,fscal,fjz2);
1036 gmx_mm_decrement_3rvec_1ptr_swizzle_pd(f+j_coord_offsetA,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1038 /* Inner loop uses 385 flops */
1041 /* End of innermost loop */
1043 gmx_mm_update_iforce_3atom_swizzle_pd(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1044 f+i_coord_offset,fshift+i_shift_offset);
1047 /* Update potential energies */
1048 gmx_mm_update_1pot_pd(velecsum,kernel_data->energygrp_elec+ggid);
1049 gmx_mm_update_1pot_pd(vvdwsum,kernel_data->energygrp_vdw+ggid);
1051 /* Increment number of inner iterations */
1052 inneriter += j_index_end - j_index_start;
1054 /* Outer loop uses 20 flops */
1057 /* Increment number of outer iterations */
1060 /* Update outer/inner flops */
1062 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_VF,outeriter*20 + inneriter*385);
1065 * Gromacs nonbonded kernel: nb_kernel_ElecRFCut_VdwLJSw_GeomW3W3_F_avx_128_fma_double
1066 * Electrostatics interaction: ReactionField
1067 * VdW interaction: LennardJones
1068 * Geometry: Water3-Water3
1069 * Calculate force/pot: Force
1072 nb_kernel_ElecRFCut_VdwLJSw_GeomW3W3_F_avx_128_fma_double
1073 (t_nblist * gmx_restrict nlist,
1074 rvec * gmx_restrict xx,
1075 rvec * gmx_restrict ff,
1076 t_forcerec * gmx_restrict fr,
1077 t_mdatoms * gmx_restrict mdatoms,
1078 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
1079 t_nrnb * gmx_restrict nrnb)
1081 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
1082 * just 0 for non-waters.
1083 * Suffixes A,B refer to j loop unrolling done with SSE double precision, e.g. for the two different
1084 * jnr indices corresponding to data put in the four positions in the SIMD register.
1086 int i_shift_offset,i_coord_offset,outeriter,inneriter;
1087 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1089 int j_coord_offsetA,j_coord_offsetB;
1090 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
1091 real rcutoff_scalar;
1092 real *shiftvec,*fshift,*x,*f;
1093 __m128d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
1095 __m128d ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
1097 __m128d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1099 __m128d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1100 int vdwjidx0A,vdwjidx0B;
1101 __m128d jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
1102 int vdwjidx1A,vdwjidx1B;
1103 __m128d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1104 int vdwjidx2A,vdwjidx2B;
1105 __m128d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1106 __m128d dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
1107 __m128d dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
1108 __m128d dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
1109 __m128d dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
1110 __m128d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1111 __m128d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1112 __m128d dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
1113 __m128d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1114 __m128d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1115 __m128d velec,felec,velecsum,facel,crf,krf,krf2;
1118 __m128d rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
1121 __m128d one_sixth = _mm_set1_pd(1.0/6.0);
1122 __m128d one_twelfth = _mm_set1_pd(1.0/12.0);
1123 __m128d rswitch,swV3,swV4,swV5,swF2,swF3,swF4,d,d2,sw,dsw;
1124 real rswitch_scalar,d_scalar;
1125 __m128d dummy_mask,cutoff_mask;
1126 __m128d signbit = gmx_mm_castsi128_pd( _mm_set_epi32(0x80000000,0x00000000,0x80000000,0x00000000) );
1127 __m128d one = _mm_set1_pd(1.0);
1128 __m128d two = _mm_set1_pd(2.0);
1134 jindex = nlist->jindex;
1136 shiftidx = nlist->shift;
1138 shiftvec = fr->shift_vec[0];
1139 fshift = fr->fshift[0];
1140 facel = _mm_set1_pd(fr->epsfac);
1141 charge = mdatoms->chargeA;
1142 krf = _mm_set1_pd(fr->ic->k_rf);
1143 krf2 = _mm_set1_pd(fr->ic->k_rf*2.0);
1144 crf = _mm_set1_pd(fr->ic->c_rf);
1145 nvdwtype = fr->ntype;
1146 vdwparam = fr->nbfp;
1147 vdwtype = mdatoms->typeA;
1149 /* Setup water-specific parameters */
1150 inr = nlist->iinr[0];
1151 iq0 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+0]));
1152 iq1 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+1]));
1153 iq2 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+2]));
1154 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
1156 jq0 = _mm_set1_pd(charge[inr+0]);
1157 jq1 = _mm_set1_pd(charge[inr+1]);
1158 jq2 = _mm_set1_pd(charge[inr+2]);
1159 vdwjidx0A = 2*vdwtype[inr+0];
1160 qq00 = _mm_mul_pd(iq0,jq0);
1161 c6_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A]);
1162 c12_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A+1]);
1163 qq01 = _mm_mul_pd(iq0,jq1);
1164 qq02 = _mm_mul_pd(iq0,jq2);
1165 qq10 = _mm_mul_pd(iq1,jq0);
1166 qq11 = _mm_mul_pd(iq1,jq1);
1167 qq12 = _mm_mul_pd(iq1,jq2);
1168 qq20 = _mm_mul_pd(iq2,jq0);
1169 qq21 = _mm_mul_pd(iq2,jq1);
1170 qq22 = _mm_mul_pd(iq2,jq2);
1172 /* When we use explicit cutoffs the value must be identical for elec and VdW, so use elec as an arbitrary choice */
1173 rcutoff_scalar = fr->rcoulomb;
1174 rcutoff = _mm_set1_pd(rcutoff_scalar);
1175 rcutoff2 = _mm_mul_pd(rcutoff,rcutoff);
1177 rswitch_scalar = fr->rvdw_switch;
1178 rswitch = _mm_set1_pd(rswitch_scalar);
1179 /* Setup switch parameters */
1180 d_scalar = rcutoff_scalar-rswitch_scalar;
1181 d = _mm_set1_pd(d_scalar);
1182 swV3 = _mm_set1_pd(-10.0/(d_scalar*d_scalar*d_scalar));
1183 swV4 = _mm_set1_pd( 15.0/(d_scalar*d_scalar*d_scalar*d_scalar));
1184 swV5 = _mm_set1_pd( -6.0/(d_scalar*d_scalar*d_scalar*d_scalar*d_scalar));
1185 swF2 = _mm_set1_pd(-30.0/(d_scalar*d_scalar*d_scalar));
1186 swF3 = _mm_set1_pd( 60.0/(d_scalar*d_scalar*d_scalar*d_scalar));
1187 swF4 = _mm_set1_pd(-30.0/(d_scalar*d_scalar*d_scalar*d_scalar*d_scalar));
1189 /* Avoid stupid compiler warnings */
1191 j_coord_offsetA = 0;
1192 j_coord_offsetB = 0;
1197 /* Start outer loop over neighborlists */
1198 for(iidx=0; iidx<nri; iidx++)
1200 /* Load shift vector for this list */
1201 i_shift_offset = DIM*shiftidx[iidx];
1203 /* Load limits for loop over neighbors */
1204 j_index_start = jindex[iidx];
1205 j_index_end = jindex[iidx+1];
1207 /* Get outer coordinate index */
1209 i_coord_offset = DIM*inr;
1211 /* Load i particle coords and add shift vector */
1212 gmx_mm_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset,
1213 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
1215 fix0 = _mm_setzero_pd();
1216 fiy0 = _mm_setzero_pd();
1217 fiz0 = _mm_setzero_pd();
1218 fix1 = _mm_setzero_pd();
1219 fiy1 = _mm_setzero_pd();
1220 fiz1 = _mm_setzero_pd();
1221 fix2 = _mm_setzero_pd();
1222 fiy2 = _mm_setzero_pd();
1223 fiz2 = _mm_setzero_pd();
1225 /* Start inner kernel loop */
1226 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
1229 /* Get j neighbor index, and coordinate index */
1231 jnrB = jjnr[jidx+1];
1232 j_coord_offsetA = DIM*jnrA;
1233 j_coord_offsetB = DIM*jnrB;
1235 /* load j atom coordinates */
1236 gmx_mm_load_3rvec_2ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
1237 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1239 /* Calculate displacement vector */
1240 dx00 = _mm_sub_pd(ix0,jx0);
1241 dy00 = _mm_sub_pd(iy0,jy0);
1242 dz00 = _mm_sub_pd(iz0,jz0);
1243 dx01 = _mm_sub_pd(ix0,jx1);
1244 dy01 = _mm_sub_pd(iy0,jy1);
1245 dz01 = _mm_sub_pd(iz0,jz1);
1246 dx02 = _mm_sub_pd(ix0,jx2);
1247 dy02 = _mm_sub_pd(iy0,jy2);
1248 dz02 = _mm_sub_pd(iz0,jz2);
1249 dx10 = _mm_sub_pd(ix1,jx0);
1250 dy10 = _mm_sub_pd(iy1,jy0);
1251 dz10 = _mm_sub_pd(iz1,jz0);
1252 dx11 = _mm_sub_pd(ix1,jx1);
1253 dy11 = _mm_sub_pd(iy1,jy1);
1254 dz11 = _mm_sub_pd(iz1,jz1);
1255 dx12 = _mm_sub_pd(ix1,jx2);
1256 dy12 = _mm_sub_pd(iy1,jy2);
1257 dz12 = _mm_sub_pd(iz1,jz2);
1258 dx20 = _mm_sub_pd(ix2,jx0);
1259 dy20 = _mm_sub_pd(iy2,jy0);
1260 dz20 = _mm_sub_pd(iz2,jz0);
1261 dx21 = _mm_sub_pd(ix2,jx1);
1262 dy21 = _mm_sub_pd(iy2,jy1);
1263 dz21 = _mm_sub_pd(iz2,jz1);
1264 dx22 = _mm_sub_pd(ix2,jx2);
1265 dy22 = _mm_sub_pd(iy2,jy2);
1266 dz22 = _mm_sub_pd(iz2,jz2);
1268 /* Calculate squared distance and things based on it */
1269 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
1270 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
1271 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
1272 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
1273 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
1274 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
1275 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
1276 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
1277 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
1279 rinv00 = gmx_mm_invsqrt_pd(rsq00);
1280 rinv01 = gmx_mm_invsqrt_pd(rsq01);
1281 rinv02 = gmx_mm_invsqrt_pd(rsq02);
1282 rinv10 = gmx_mm_invsqrt_pd(rsq10);
1283 rinv11 = gmx_mm_invsqrt_pd(rsq11);
1284 rinv12 = gmx_mm_invsqrt_pd(rsq12);
1285 rinv20 = gmx_mm_invsqrt_pd(rsq20);
1286 rinv21 = gmx_mm_invsqrt_pd(rsq21);
1287 rinv22 = gmx_mm_invsqrt_pd(rsq22);
1289 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
1290 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
1291 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
1292 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
1293 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
1294 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
1295 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
1296 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
1297 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
1299 fjx0 = _mm_setzero_pd();
1300 fjy0 = _mm_setzero_pd();
1301 fjz0 = _mm_setzero_pd();
1302 fjx1 = _mm_setzero_pd();
1303 fjy1 = _mm_setzero_pd();
1304 fjz1 = _mm_setzero_pd();
1305 fjx2 = _mm_setzero_pd();
1306 fjy2 = _mm_setzero_pd();
1307 fjz2 = _mm_setzero_pd();
1309 /**************************
1310 * CALCULATE INTERACTIONS *
1311 **************************/
1313 if (gmx_mm_any_lt(rsq00,rcutoff2))
1316 r00 = _mm_mul_pd(rsq00,rinv00);
1318 /* REACTION-FIELD ELECTROSTATICS */
1319 felec = _mm_mul_pd(qq00,_mm_msub_pd(rinv00,rinvsq00,krf2));
1321 /* LENNARD-JONES DISPERSION/REPULSION */
1323 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
1324 vvdw6 = _mm_mul_pd(c6_00,rinvsix);
1325 vvdw12 = _mm_mul_pd(c12_00,_mm_mul_pd(rinvsix,rinvsix));
1326 vvdw = _mm_msub_pd( vvdw12,one_twelfth, _mm_mul_pd(vvdw6,one_sixth) );
1327 fvdw = _mm_mul_pd(_mm_sub_pd(vvdw12,vvdw6),rinvsq00);
1329 d = _mm_sub_pd(r00,rswitch);
1330 d = _mm_max_pd(d,_mm_setzero_pd());
1331 d2 = _mm_mul_pd(d,d);
1332 sw = _mm_add_pd(one,_mm_mul_pd(d2,_mm_mul_pd(d,_mm_macc_pd(d,_mm_macc_pd(d,swV5,swV4),swV3))));
1334 dsw = _mm_mul_pd(d2,_mm_macc_pd(d,_mm_macc_pd(d,swF4,swF3),swF2));
1336 /* Evaluate switch function */
1337 /* fscal'=f'/r=-(v*sw)'/r=-(v'*sw+v*dsw)/r=-v'*sw/r-v*dsw/r=fscal*sw-v*dsw/r */
1338 fvdw = _mm_msub_pd( fvdw,sw , _mm_mul_pd(rinv00,_mm_mul_pd(vvdw,dsw)) );
1339 cutoff_mask = _mm_cmplt_pd(rsq00,rcutoff2);
1341 fscal = _mm_add_pd(felec,fvdw);
1343 fscal = _mm_and_pd(fscal,cutoff_mask);
1345 /* Update vectorial force */
1346 fix0 = _mm_macc_pd(dx00,fscal,fix0);
1347 fiy0 = _mm_macc_pd(dy00,fscal,fiy0);
1348 fiz0 = _mm_macc_pd(dz00,fscal,fiz0);
1350 fjx0 = _mm_macc_pd(dx00,fscal,fjx0);
1351 fjy0 = _mm_macc_pd(dy00,fscal,fjy0);
1352 fjz0 = _mm_macc_pd(dz00,fscal,fjz0);
1356 /**************************
1357 * CALCULATE INTERACTIONS *
1358 **************************/
1360 if (gmx_mm_any_lt(rsq01,rcutoff2))
1363 /* REACTION-FIELD ELECTROSTATICS */
1364 felec = _mm_mul_pd(qq01,_mm_msub_pd(rinv01,rinvsq01,krf2));
1366 cutoff_mask = _mm_cmplt_pd(rsq01,rcutoff2);
1370 fscal = _mm_and_pd(fscal,cutoff_mask);
1372 /* Update vectorial force */
1373 fix0 = _mm_macc_pd(dx01,fscal,fix0);
1374 fiy0 = _mm_macc_pd(dy01,fscal,fiy0);
1375 fiz0 = _mm_macc_pd(dz01,fscal,fiz0);
1377 fjx1 = _mm_macc_pd(dx01,fscal,fjx1);
1378 fjy1 = _mm_macc_pd(dy01,fscal,fjy1);
1379 fjz1 = _mm_macc_pd(dz01,fscal,fjz1);
1383 /**************************
1384 * CALCULATE INTERACTIONS *
1385 **************************/
1387 if (gmx_mm_any_lt(rsq02,rcutoff2))
1390 /* REACTION-FIELD ELECTROSTATICS */
1391 felec = _mm_mul_pd(qq02,_mm_msub_pd(rinv02,rinvsq02,krf2));
1393 cutoff_mask = _mm_cmplt_pd(rsq02,rcutoff2);
1397 fscal = _mm_and_pd(fscal,cutoff_mask);
1399 /* Update vectorial force */
1400 fix0 = _mm_macc_pd(dx02,fscal,fix0);
1401 fiy0 = _mm_macc_pd(dy02,fscal,fiy0);
1402 fiz0 = _mm_macc_pd(dz02,fscal,fiz0);
1404 fjx2 = _mm_macc_pd(dx02,fscal,fjx2);
1405 fjy2 = _mm_macc_pd(dy02,fscal,fjy2);
1406 fjz2 = _mm_macc_pd(dz02,fscal,fjz2);
1410 /**************************
1411 * CALCULATE INTERACTIONS *
1412 **************************/
1414 if (gmx_mm_any_lt(rsq10,rcutoff2))
1417 /* REACTION-FIELD ELECTROSTATICS */
1418 felec = _mm_mul_pd(qq10,_mm_msub_pd(rinv10,rinvsq10,krf2));
1420 cutoff_mask = _mm_cmplt_pd(rsq10,rcutoff2);
1424 fscal = _mm_and_pd(fscal,cutoff_mask);
1426 /* Update vectorial force */
1427 fix1 = _mm_macc_pd(dx10,fscal,fix1);
1428 fiy1 = _mm_macc_pd(dy10,fscal,fiy1);
1429 fiz1 = _mm_macc_pd(dz10,fscal,fiz1);
1431 fjx0 = _mm_macc_pd(dx10,fscal,fjx0);
1432 fjy0 = _mm_macc_pd(dy10,fscal,fjy0);
1433 fjz0 = _mm_macc_pd(dz10,fscal,fjz0);
1437 /**************************
1438 * CALCULATE INTERACTIONS *
1439 **************************/
1441 if (gmx_mm_any_lt(rsq11,rcutoff2))
1444 /* REACTION-FIELD ELECTROSTATICS */
1445 felec = _mm_mul_pd(qq11,_mm_msub_pd(rinv11,rinvsq11,krf2));
1447 cutoff_mask = _mm_cmplt_pd(rsq11,rcutoff2);
1451 fscal = _mm_and_pd(fscal,cutoff_mask);
1453 /* Update vectorial force */
1454 fix1 = _mm_macc_pd(dx11,fscal,fix1);
1455 fiy1 = _mm_macc_pd(dy11,fscal,fiy1);
1456 fiz1 = _mm_macc_pd(dz11,fscal,fiz1);
1458 fjx1 = _mm_macc_pd(dx11,fscal,fjx1);
1459 fjy1 = _mm_macc_pd(dy11,fscal,fjy1);
1460 fjz1 = _mm_macc_pd(dz11,fscal,fjz1);
1464 /**************************
1465 * CALCULATE INTERACTIONS *
1466 **************************/
1468 if (gmx_mm_any_lt(rsq12,rcutoff2))
1471 /* REACTION-FIELD ELECTROSTATICS */
1472 felec = _mm_mul_pd(qq12,_mm_msub_pd(rinv12,rinvsq12,krf2));
1474 cutoff_mask = _mm_cmplt_pd(rsq12,rcutoff2);
1478 fscal = _mm_and_pd(fscal,cutoff_mask);
1480 /* Update vectorial force */
1481 fix1 = _mm_macc_pd(dx12,fscal,fix1);
1482 fiy1 = _mm_macc_pd(dy12,fscal,fiy1);
1483 fiz1 = _mm_macc_pd(dz12,fscal,fiz1);
1485 fjx2 = _mm_macc_pd(dx12,fscal,fjx2);
1486 fjy2 = _mm_macc_pd(dy12,fscal,fjy2);
1487 fjz2 = _mm_macc_pd(dz12,fscal,fjz2);
1491 /**************************
1492 * CALCULATE INTERACTIONS *
1493 **************************/
1495 if (gmx_mm_any_lt(rsq20,rcutoff2))
1498 /* REACTION-FIELD ELECTROSTATICS */
1499 felec = _mm_mul_pd(qq20,_mm_msub_pd(rinv20,rinvsq20,krf2));
1501 cutoff_mask = _mm_cmplt_pd(rsq20,rcutoff2);
1505 fscal = _mm_and_pd(fscal,cutoff_mask);
1507 /* Update vectorial force */
1508 fix2 = _mm_macc_pd(dx20,fscal,fix2);
1509 fiy2 = _mm_macc_pd(dy20,fscal,fiy2);
1510 fiz2 = _mm_macc_pd(dz20,fscal,fiz2);
1512 fjx0 = _mm_macc_pd(dx20,fscal,fjx0);
1513 fjy0 = _mm_macc_pd(dy20,fscal,fjy0);
1514 fjz0 = _mm_macc_pd(dz20,fscal,fjz0);
1518 /**************************
1519 * CALCULATE INTERACTIONS *
1520 **************************/
1522 if (gmx_mm_any_lt(rsq21,rcutoff2))
1525 /* REACTION-FIELD ELECTROSTATICS */
1526 felec = _mm_mul_pd(qq21,_mm_msub_pd(rinv21,rinvsq21,krf2));
1528 cutoff_mask = _mm_cmplt_pd(rsq21,rcutoff2);
1532 fscal = _mm_and_pd(fscal,cutoff_mask);
1534 /* Update vectorial force */
1535 fix2 = _mm_macc_pd(dx21,fscal,fix2);
1536 fiy2 = _mm_macc_pd(dy21,fscal,fiy2);
1537 fiz2 = _mm_macc_pd(dz21,fscal,fiz2);
1539 fjx1 = _mm_macc_pd(dx21,fscal,fjx1);
1540 fjy1 = _mm_macc_pd(dy21,fscal,fjy1);
1541 fjz1 = _mm_macc_pd(dz21,fscal,fjz1);
1545 /**************************
1546 * CALCULATE INTERACTIONS *
1547 **************************/
1549 if (gmx_mm_any_lt(rsq22,rcutoff2))
1552 /* REACTION-FIELD ELECTROSTATICS */
1553 felec = _mm_mul_pd(qq22,_mm_msub_pd(rinv22,rinvsq22,krf2));
1555 cutoff_mask = _mm_cmplt_pd(rsq22,rcutoff2);
1559 fscal = _mm_and_pd(fscal,cutoff_mask);
1561 /* Update vectorial force */
1562 fix2 = _mm_macc_pd(dx22,fscal,fix2);
1563 fiy2 = _mm_macc_pd(dy22,fscal,fiy2);
1564 fiz2 = _mm_macc_pd(dz22,fscal,fiz2);
1566 fjx2 = _mm_macc_pd(dx22,fscal,fjx2);
1567 fjy2 = _mm_macc_pd(dy22,fscal,fjy2);
1568 fjz2 = _mm_macc_pd(dz22,fscal,fjz2);
1572 gmx_mm_decrement_3rvec_2ptr_swizzle_pd(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1574 /* Inner loop uses 328 flops */
1577 if(jidx<j_index_end)
1581 j_coord_offsetA = DIM*jnrA;
1583 /* load j atom coordinates */
1584 gmx_mm_load_3rvec_1ptr_swizzle_pd(x+j_coord_offsetA,
1585 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1587 /* Calculate displacement vector */
1588 dx00 = _mm_sub_pd(ix0,jx0);
1589 dy00 = _mm_sub_pd(iy0,jy0);
1590 dz00 = _mm_sub_pd(iz0,jz0);
1591 dx01 = _mm_sub_pd(ix0,jx1);
1592 dy01 = _mm_sub_pd(iy0,jy1);
1593 dz01 = _mm_sub_pd(iz0,jz1);
1594 dx02 = _mm_sub_pd(ix0,jx2);
1595 dy02 = _mm_sub_pd(iy0,jy2);
1596 dz02 = _mm_sub_pd(iz0,jz2);
1597 dx10 = _mm_sub_pd(ix1,jx0);
1598 dy10 = _mm_sub_pd(iy1,jy0);
1599 dz10 = _mm_sub_pd(iz1,jz0);
1600 dx11 = _mm_sub_pd(ix1,jx1);
1601 dy11 = _mm_sub_pd(iy1,jy1);
1602 dz11 = _mm_sub_pd(iz1,jz1);
1603 dx12 = _mm_sub_pd(ix1,jx2);
1604 dy12 = _mm_sub_pd(iy1,jy2);
1605 dz12 = _mm_sub_pd(iz1,jz2);
1606 dx20 = _mm_sub_pd(ix2,jx0);
1607 dy20 = _mm_sub_pd(iy2,jy0);
1608 dz20 = _mm_sub_pd(iz2,jz0);
1609 dx21 = _mm_sub_pd(ix2,jx1);
1610 dy21 = _mm_sub_pd(iy2,jy1);
1611 dz21 = _mm_sub_pd(iz2,jz1);
1612 dx22 = _mm_sub_pd(ix2,jx2);
1613 dy22 = _mm_sub_pd(iy2,jy2);
1614 dz22 = _mm_sub_pd(iz2,jz2);
1616 /* Calculate squared distance and things based on it */
1617 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
1618 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
1619 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
1620 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
1621 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
1622 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
1623 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
1624 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
1625 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
1627 rinv00 = gmx_mm_invsqrt_pd(rsq00);
1628 rinv01 = gmx_mm_invsqrt_pd(rsq01);
1629 rinv02 = gmx_mm_invsqrt_pd(rsq02);
1630 rinv10 = gmx_mm_invsqrt_pd(rsq10);
1631 rinv11 = gmx_mm_invsqrt_pd(rsq11);
1632 rinv12 = gmx_mm_invsqrt_pd(rsq12);
1633 rinv20 = gmx_mm_invsqrt_pd(rsq20);
1634 rinv21 = gmx_mm_invsqrt_pd(rsq21);
1635 rinv22 = gmx_mm_invsqrt_pd(rsq22);
1637 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
1638 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
1639 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
1640 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
1641 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
1642 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
1643 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
1644 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
1645 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
1647 fjx0 = _mm_setzero_pd();
1648 fjy0 = _mm_setzero_pd();
1649 fjz0 = _mm_setzero_pd();
1650 fjx1 = _mm_setzero_pd();
1651 fjy1 = _mm_setzero_pd();
1652 fjz1 = _mm_setzero_pd();
1653 fjx2 = _mm_setzero_pd();
1654 fjy2 = _mm_setzero_pd();
1655 fjz2 = _mm_setzero_pd();
1657 /**************************
1658 * CALCULATE INTERACTIONS *
1659 **************************/
1661 if (gmx_mm_any_lt(rsq00,rcutoff2))
1664 r00 = _mm_mul_pd(rsq00,rinv00);
1666 /* REACTION-FIELD ELECTROSTATICS */
1667 felec = _mm_mul_pd(qq00,_mm_msub_pd(rinv00,rinvsq00,krf2));
1669 /* LENNARD-JONES DISPERSION/REPULSION */
1671 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
1672 vvdw6 = _mm_mul_pd(c6_00,rinvsix);
1673 vvdw12 = _mm_mul_pd(c12_00,_mm_mul_pd(rinvsix,rinvsix));
1674 vvdw = _mm_msub_pd( vvdw12,one_twelfth, _mm_mul_pd(vvdw6,one_sixth) );
1675 fvdw = _mm_mul_pd(_mm_sub_pd(vvdw12,vvdw6),rinvsq00);
1677 d = _mm_sub_pd(r00,rswitch);
1678 d = _mm_max_pd(d,_mm_setzero_pd());
1679 d2 = _mm_mul_pd(d,d);
1680 sw = _mm_add_pd(one,_mm_mul_pd(d2,_mm_mul_pd(d,_mm_macc_pd(d,_mm_macc_pd(d,swV5,swV4),swV3))));
1682 dsw = _mm_mul_pd(d2,_mm_macc_pd(d,_mm_macc_pd(d,swF4,swF3),swF2));
1684 /* Evaluate switch function */
1685 /* fscal'=f'/r=-(v*sw)'/r=-(v'*sw+v*dsw)/r=-v'*sw/r-v*dsw/r=fscal*sw-v*dsw/r */
1686 fvdw = _mm_msub_pd( fvdw,sw , _mm_mul_pd(rinv00,_mm_mul_pd(vvdw,dsw)) );
1687 cutoff_mask = _mm_cmplt_pd(rsq00,rcutoff2);
1689 fscal = _mm_add_pd(felec,fvdw);
1691 fscal = _mm_and_pd(fscal,cutoff_mask);
1693 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1695 /* Update vectorial force */
1696 fix0 = _mm_macc_pd(dx00,fscal,fix0);
1697 fiy0 = _mm_macc_pd(dy00,fscal,fiy0);
1698 fiz0 = _mm_macc_pd(dz00,fscal,fiz0);
1700 fjx0 = _mm_macc_pd(dx00,fscal,fjx0);
1701 fjy0 = _mm_macc_pd(dy00,fscal,fjy0);
1702 fjz0 = _mm_macc_pd(dz00,fscal,fjz0);
1706 /**************************
1707 * CALCULATE INTERACTIONS *
1708 **************************/
1710 if (gmx_mm_any_lt(rsq01,rcutoff2))
1713 /* REACTION-FIELD ELECTROSTATICS */
1714 felec = _mm_mul_pd(qq01,_mm_msub_pd(rinv01,rinvsq01,krf2));
1716 cutoff_mask = _mm_cmplt_pd(rsq01,rcutoff2);
1720 fscal = _mm_and_pd(fscal,cutoff_mask);
1722 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1724 /* Update vectorial force */
1725 fix0 = _mm_macc_pd(dx01,fscal,fix0);
1726 fiy0 = _mm_macc_pd(dy01,fscal,fiy0);
1727 fiz0 = _mm_macc_pd(dz01,fscal,fiz0);
1729 fjx1 = _mm_macc_pd(dx01,fscal,fjx1);
1730 fjy1 = _mm_macc_pd(dy01,fscal,fjy1);
1731 fjz1 = _mm_macc_pd(dz01,fscal,fjz1);
1735 /**************************
1736 * CALCULATE INTERACTIONS *
1737 **************************/
1739 if (gmx_mm_any_lt(rsq02,rcutoff2))
1742 /* REACTION-FIELD ELECTROSTATICS */
1743 felec = _mm_mul_pd(qq02,_mm_msub_pd(rinv02,rinvsq02,krf2));
1745 cutoff_mask = _mm_cmplt_pd(rsq02,rcutoff2);
1749 fscal = _mm_and_pd(fscal,cutoff_mask);
1751 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1753 /* Update vectorial force */
1754 fix0 = _mm_macc_pd(dx02,fscal,fix0);
1755 fiy0 = _mm_macc_pd(dy02,fscal,fiy0);
1756 fiz0 = _mm_macc_pd(dz02,fscal,fiz0);
1758 fjx2 = _mm_macc_pd(dx02,fscal,fjx2);
1759 fjy2 = _mm_macc_pd(dy02,fscal,fjy2);
1760 fjz2 = _mm_macc_pd(dz02,fscal,fjz2);
1764 /**************************
1765 * CALCULATE INTERACTIONS *
1766 **************************/
1768 if (gmx_mm_any_lt(rsq10,rcutoff2))
1771 /* REACTION-FIELD ELECTROSTATICS */
1772 felec = _mm_mul_pd(qq10,_mm_msub_pd(rinv10,rinvsq10,krf2));
1774 cutoff_mask = _mm_cmplt_pd(rsq10,rcutoff2);
1778 fscal = _mm_and_pd(fscal,cutoff_mask);
1780 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1782 /* Update vectorial force */
1783 fix1 = _mm_macc_pd(dx10,fscal,fix1);
1784 fiy1 = _mm_macc_pd(dy10,fscal,fiy1);
1785 fiz1 = _mm_macc_pd(dz10,fscal,fiz1);
1787 fjx0 = _mm_macc_pd(dx10,fscal,fjx0);
1788 fjy0 = _mm_macc_pd(dy10,fscal,fjy0);
1789 fjz0 = _mm_macc_pd(dz10,fscal,fjz0);
1793 /**************************
1794 * CALCULATE INTERACTIONS *
1795 **************************/
1797 if (gmx_mm_any_lt(rsq11,rcutoff2))
1800 /* REACTION-FIELD ELECTROSTATICS */
1801 felec = _mm_mul_pd(qq11,_mm_msub_pd(rinv11,rinvsq11,krf2));
1803 cutoff_mask = _mm_cmplt_pd(rsq11,rcutoff2);
1807 fscal = _mm_and_pd(fscal,cutoff_mask);
1809 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1811 /* Update vectorial force */
1812 fix1 = _mm_macc_pd(dx11,fscal,fix1);
1813 fiy1 = _mm_macc_pd(dy11,fscal,fiy1);
1814 fiz1 = _mm_macc_pd(dz11,fscal,fiz1);
1816 fjx1 = _mm_macc_pd(dx11,fscal,fjx1);
1817 fjy1 = _mm_macc_pd(dy11,fscal,fjy1);
1818 fjz1 = _mm_macc_pd(dz11,fscal,fjz1);
1822 /**************************
1823 * CALCULATE INTERACTIONS *
1824 **************************/
1826 if (gmx_mm_any_lt(rsq12,rcutoff2))
1829 /* REACTION-FIELD ELECTROSTATICS */
1830 felec = _mm_mul_pd(qq12,_mm_msub_pd(rinv12,rinvsq12,krf2));
1832 cutoff_mask = _mm_cmplt_pd(rsq12,rcutoff2);
1836 fscal = _mm_and_pd(fscal,cutoff_mask);
1838 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1840 /* Update vectorial force */
1841 fix1 = _mm_macc_pd(dx12,fscal,fix1);
1842 fiy1 = _mm_macc_pd(dy12,fscal,fiy1);
1843 fiz1 = _mm_macc_pd(dz12,fscal,fiz1);
1845 fjx2 = _mm_macc_pd(dx12,fscal,fjx2);
1846 fjy2 = _mm_macc_pd(dy12,fscal,fjy2);
1847 fjz2 = _mm_macc_pd(dz12,fscal,fjz2);
1851 /**************************
1852 * CALCULATE INTERACTIONS *
1853 **************************/
1855 if (gmx_mm_any_lt(rsq20,rcutoff2))
1858 /* REACTION-FIELD ELECTROSTATICS */
1859 felec = _mm_mul_pd(qq20,_mm_msub_pd(rinv20,rinvsq20,krf2));
1861 cutoff_mask = _mm_cmplt_pd(rsq20,rcutoff2);
1865 fscal = _mm_and_pd(fscal,cutoff_mask);
1867 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1869 /* Update vectorial force */
1870 fix2 = _mm_macc_pd(dx20,fscal,fix2);
1871 fiy2 = _mm_macc_pd(dy20,fscal,fiy2);
1872 fiz2 = _mm_macc_pd(dz20,fscal,fiz2);
1874 fjx0 = _mm_macc_pd(dx20,fscal,fjx0);
1875 fjy0 = _mm_macc_pd(dy20,fscal,fjy0);
1876 fjz0 = _mm_macc_pd(dz20,fscal,fjz0);
1880 /**************************
1881 * CALCULATE INTERACTIONS *
1882 **************************/
1884 if (gmx_mm_any_lt(rsq21,rcutoff2))
1887 /* REACTION-FIELD ELECTROSTATICS */
1888 felec = _mm_mul_pd(qq21,_mm_msub_pd(rinv21,rinvsq21,krf2));
1890 cutoff_mask = _mm_cmplt_pd(rsq21,rcutoff2);
1894 fscal = _mm_and_pd(fscal,cutoff_mask);
1896 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1898 /* Update vectorial force */
1899 fix2 = _mm_macc_pd(dx21,fscal,fix2);
1900 fiy2 = _mm_macc_pd(dy21,fscal,fiy2);
1901 fiz2 = _mm_macc_pd(dz21,fscal,fiz2);
1903 fjx1 = _mm_macc_pd(dx21,fscal,fjx1);
1904 fjy1 = _mm_macc_pd(dy21,fscal,fjy1);
1905 fjz1 = _mm_macc_pd(dz21,fscal,fjz1);
1909 /**************************
1910 * CALCULATE INTERACTIONS *
1911 **************************/
1913 if (gmx_mm_any_lt(rsq22,rcutoff2))
1916 /* REACTION-FIELD ELECTROSTATICS */
1917 felec = _mm_mul_pd(qq22,_mm_msub_pd(rinv22,rinvsq22,krf2));
1919 cutoff_mask = _mm_cmplt_pd(rsq22,rcutoff2);
1923 fscal = _mm_and_pd(fscal,cutoff_mask);
1925 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1927 /* Update vectorial force */
1928 fix2 = _mm_macc_pd(dx22,fscal,fix2);
1929 fiy2 = _mm_macc_pd(dy22,fscal,fiy2);
1930 fiz2 = _mm_macc_pd(dz22,fscal,fiz2);
1932 fjx2 = _mm_macc_pd(dx22,fscal,fjx2);
1933 fjy2 = _mm_macc_pd(dy22,fscal,fjy2);
1934 fjz2 = _mm_macc_pd(dz22,fscal,fjz2);
1938 gmx_mm_decrement_3rvec_1ptr_swizzle_pd(f+j_coord_offsetA,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1940 /* Inner loop uses 328 flops */
1943 /* End of innermost loop */
1945 gmx_mm_update_iforce_3atom_swizzle_pd(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1946 f+i_coord_offset,fshift+i_shift_offset);
1948 /* Increment number of inner iterations */
1949 inneriter += j_index_end - j_index_start;
1951 /* Outer loop uses 18 flops */
1954 /* Increment number of outer iterations */
1957 /* Update outer/inner flops */
1959 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_F,outeriter*18 + inneriter*328);