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36 * Note: this file was generated by the GROMACS avx_128_fma_double kernel generator.
42 #include "../nb_kernel.h"
43 #include "types/simple.h"
44 #include "gromacs/math/vec.h"
47 #include "gromacs/simd/math_x86_avx_128_fma_double.h"
48 #include "kernelutil_x86_avx_128_fma_double.h"
51 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwLJEw_GeomW3W3_VF_avx_128_fma_double
52 * Electrostatics interaction: Ewald
53 * VdW interaction: LJEwald
54 * Geometry: Water3-Water3
55 * Calculate force/pot: PotentialAndForce
58 nb_kernel_ElecEw_VdwLJEw_GeomW3W3_VF_avx_128_fma_double
59 (t_nblist * gmx_restrict nlist,
60 rvec * gmx_restrict xx,
61 rvec * gmx_restrict ff,
62 t_forcerec * gmx_restrict fr,
63 t_mdatoms * gmx_restrict mdatoms,
64 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
65 t_nrnb * gmx_restrict nrnb)
67 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
68 * just 0 for non-waters.
69 * Suffixes A,B refer to j loop unrolling done with SSE double precision, e.g. for the two different
70 * jnr indices corresponding to data put in the four positions in the SIMD register.
72 int i_shift_offset,i_coord_offset,outeriter,inneriter;
73 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
75 int j_coord_offsetA,j_coord_offsetB;
76 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
78 real *shiftvec,*fshift,*x,*f;
79 __m128d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
81 __m128d ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
83 __m128d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
85 __m128d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
86 int vdwjidx0A,vdwjidx0B;
87 __m128d jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
88 int vdwjidx1A,vdwjidx1B;
89 __m128d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
90 int vdwjidx2A,vdwjidx2B;
91 __m128d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
92 __m128d dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
93 __m128d dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
94 __m128d dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
95 __m128d dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
96 __m128d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
97 __m128d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
98 __m128d dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
99 __m128d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
100 __m128d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
101 __m128d velec,felec,velecsum,facel,crf,krf,krf2;
104 __m128d rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
107 __m128d one_sixth = _mm_set1_pd(1.0/6.0);
108 __m128d one_twelfth = _mm_set1_pd(1.0/12.0);
119 __m128d ewclj,ewclj2,ewclj6,ewcljrsq,poly,exponent,f6A,f6B,sh_lj_ewald;
120 __m128d one_half = _mm_set1_pd(0.5);
121 __m128d minus_one = _mm_set1_pd(-1.0);
123 __m128d ewtabscale,eweps,twoeweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
125 __m128d dummy_mask,cutoff_mask;
126 __m128d signbit = gmx_mm_castsi128_pd( _mm_set_epi32(0x80000000,0x00000000,0x80000000,0x00000000) );
127 __m128d one = _mm_set1_pd(1.0);
128 __m128d two = _mm_set1_pd(2.0);
134 jindex = nlist->jindex;
136 shiftidx = nlist->shift;
138 shiftvec = fr->shift_vec[0];
139 fshift = fr->fshift[0];
140 facel = _mm_set1_pd(fr->epsfac);
141 charge = mdatoms->chargeA;
142 nvdwtype = fr->ntype;
144 vdwtype = mdatoms->typeA;
145 vdwgridparam = fr->ljpme_c6grid;
146 sh_lj_ewald = _mm_set1_pd(fr->ic->sh_lj_ewald);
147 ewclj = _mm_set1_pd(fr->ewaldcoeff_lj);
148 ewclj2 = _mm_mul_pd(minus_one,_mm_mul_pd(ewclj,ewclj));
150 sh_ewald = _mm_set1_pd(fr->ic->sh_ewald);
151 ewtab = fr->ic->tabq_coul_FDV0;
152 ewtabscale = _mm_set1_pd(fr->ic->tabq_scale);
153 ewtabhalfspace = _mm_set1_pd(0.5/fr->ic->tabq_scale);
155 /* Setup water-specific parameters */
156 inr = nlist->iinr[0];
157 iq0 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+0]));
158 iq1 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+1]));
159 iq2 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+2]));
160 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
162 jq0 = _mm_set1_pd(charge[inr+0]);
163 jq1 = _mm_set1_pd(charge[inr+1]);
164 jq2 = _mm_set1_pd(charge[inr+2]);
165 vdwjidx0A = 2*vdwtype[inr+0];
166 qq00 = _mm_mul_pd(iq0,jq0);
167 c6_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A]);
168 c12_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A+1]);
169 c6grid_00 = _mm_set1_pd(vdwgridparam[vdwioffset0+vdwjidx0A]);
170 qq01 = _mm_mul_pd(iq0,jq1);
171 qq02 = _mm_mul_pd(iq0,jq2);
172 qq10 = _mm_mul_pd(iq1,jq0);
173 qq11 = _mm_mul_pd(iq1,jq1);
174 qq12 = _mm_mul_pd(iq1,jq2);
175 qq20 = _mm_mul_pd(iq2,jq0);
176 qq21 = _mm_mul_pd(iq2,jq1);
177 qq22 = _mm_mul_pd(iq2,jq2);
179 /* Avoid stupid compiler warnings */
187 /* Start outer loop over neighborlists */
188 for(iidx=0; iidx<nri; iidx++)
190 /* Load shift vector for this list */
191 i_shift_offset = DIM*shiftidx[iidx];
193 /* Load limits for loop over neighbors */
194 j_index_start = jindex[iidx];
195 j_index_end = jindex[iidx+1];
197 /* Get outer coordinate index */
199 i_coord_offset = DIM*inr;
201 /* Load i particle coords and add shift vector */
202 gmx_mm_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset,
203 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
205 fix0 = _mm_setzero_pd();
206 fiy0 = _mm_setzero_pd();
207 fiz0 = _mm_setzero_pd();
208 fix1 = _mm_setzero_pd();
209 fiy1 = _mm_setzero_pd();
210 fiz1 = _mm_setzero_pd();
211 fix2 = _mm_setzero_pd();
212 fiy2 = _mm_setzero_pd();
213 fiz2 = _mm_setzero_pd();
215 /* Reset potential sums */
216 velecsum = _mm_setzero_pd();
217 vvdwsum = _mm_setzero_pd();
219 /* Start inner kernel loop */
220 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
223 /* Get j neighbor index, and coordinate index */
226 j_coord_offsetA = DIM*jnrA;
227 j_coord_offsetB = DIM*jnrB;
229 /* load j atom coordinates */
230 gmx_mm_load_3rvec_2ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
231 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
233 /* Calculate displacement vector */
234 dx00 = _mm_sub_pd(ix0,jx0);
235 dy00 = _mm_sub_pd(iy0,jy0);
236 dz00 = _mm_sub_pd(iz0,jz0);
237 dx01 = _mm_sub_pd(ix0,jx1);
238 dy01 = _mm_sub_pd(iy0,jy1);
239 dz01 = _mm_sub_pd(iz0,jz1);
240 dx02 = _mm_sub_pd(ix0,jx2);
241 dy02 = _mm_sub_pd(iy0,jy2);
242 dz02 = _mm_sub_pd(iz0,jz2);
243 dx10 = _mm_sub_pd(ix1,jx0);
244 dy10 = _mm_sub_pd(iy1,jy0);
245 dz10 = _mm_sub_pd(iz1,jz0);
246 dx11 = _mm_sub_pd(ix1,jx1);
247 dy11 = _mm_sub_pd(iy1,jy1);
248 dz11 = _mm_sub_pd(iz1,jz1);
249 dx12 = _mm_sub_pd(ix1,jx2);
250 dy12 = _mm_sub_pd(iy1,jy2);
251 dz12 = _mm_sub_pd(iz1,jz2);
252 dx20 = _mm_sub_pd(ix2,jx0);
253 dy20 = _mm_sub_pd(iy2,jy0);
254 dz20 = _mm_sub_pd(iz2,jz0);
255 dx21 = _mm_sub_pd(ix2,jx1);
256 dy21 = _mm_sub_pd(iy2,jy1);
257 dz21 = _mm_sub_pd(iz2,jz1);
258 dx22 = _mm_sub_pd(ix2,jx2);
259 dy22 = _mm_sub_pd(iy2,jy2);
260 dz22 = _mm_sub_pd(iz2,jz2);
262 /* Calculate squared distance and things based on it */
263 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
264 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
265 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
266 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
267 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
268 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
269 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
270 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
271 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
273 rinv00 = gmx_mm_invsqrt_pd(rsq00);
274 rinv01 = gmx_mm_invsqrt_pd(rsq01);
275 rinv02 = gmx_mm_invsqrt_pd(rsq02);
276 rinv10 = gmx_mm_invsqrt_pd(rsq10);
277 rinv11 = gmx_mm_invsqrt_pd(rsq11);
278 rinv12 = gmx_mm_invsqrt_pd(rsq12);
279 rinv20 = gmx_mm_invsqrt_pd(rsq20);
280 rinv21 = gmx_mm_invsqrt_pd(rsq21);
281 rinv22 = gmx_mm_invsqrt_pd(rsq22);
283 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
284 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
285 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
286 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
287 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
288 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
289 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
290 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
291 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
293 fjx0 = _mm_setzero_pd();
294 fjy0 = _mm_setzero_pd();
295 fjz0 = _mm_setzero_pd();
296 fjx1 = _mm_setzero_pd();
297 fjy1 = _mm_setzero_pd();
298 fjz1 = _mm_setzero_pd();
299 fjx2 = _mm_setzero_pd();
300 fjy2 = _mm_setzero_pd();
301 fjz2 = _mm_setzero_pd();
303 /**************************
304 * CALCULATE INTERACTIONS *
305 **************************/
307 r00 = _mm_mul_pd(rsq00,rinv00);
309 /* EWALD ELECTROSTATICS */
311 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
312 ewrt = _mm_mul_pd(r00,ewtabscale);
313 ewitab = _mm_cvttpd_epi32(ewrt);
315 eweps = _mm_frcz_pd(ewrt);
317 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
319 twoeweps = _mm_add_pd(eweps,eweps);
320 ewitab = _mm_slli_epi32(ewitab,2);
321 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
322 ewtabD = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
323 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
324 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
325 ewtabFn = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,1) +2);
326 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
327 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
328 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
329 velec = _mm_mul_pd(qq00,_mm_sub_pd(rinv00,velec));
330 felec = _mm_mul_pd(_mm_mul_pd(qq00,rinv00),_mm_sub_pd(rinvsq00,felec));
332 /* Analytical LJ-PME */
333 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
334 ewcljrsq = _mm_mul_pd(ewclj2,rsq00);
335 ewclj6 = _mm_mul_pd(ewclj2,_mm_mul_pd(ewclj2,ewclj2));
336 exponent = gmx_simd_exp_d(ewcljrsq);
337 /* poly = exp(-(beta*r)^2) * (1 + (beta*r)^2 + (beta*r)^4 /2) */
338 poly = _mm_mul_pd(exponent,_mm_macc_pd(_mm_mul_pd(ewcljrsq,ewcljrsq),one_half,_mm_sub_pd(one,ewcljrsq)));
339 /* vvdw6 = [C6 - C6grid * (1-poly)]/r6 */
340 vvdw6 = _mm_mul_pd(_mm_macc_pd(-c6grid_00,_mm_sub_pd(one,poly),c6_00),rinvsix);
341 vvdw12 = _mm_mul_pd(c12_00,_mm_mul_pd(rinvsix,rinvsix));
342 vvdw = _mm_msub_pd(vvdw12,one_twelfth,_mm_mul_pd(vvdw6,one_sixth));
343 /* fvdw = vvdw12/r - (vvdw6/r + (C6grid * exponent * beta^6)/r) */
344 fvdw = _mm_mul_pd(_mm_add_pd(vvdw12,_mm_msub_pd(_mm_mul_pd(c6grid_00,one_sixth),_mm_mul_pd(exponent,ewclj6),vvdw6)),rinvsq00);
346 /* Update potential sum for this i atom from the interaction with this j atom. */
347 velecsum = _mm_add_pd(velecsum,velec);
348 vvdwsum = _mm_add_pd(vvdwsum,vvdw);
350 fscal = _mm_add_pd(felec,fvdw);
352 /* Update vectorial force */
353 fix0 = _mm_macc_pd(dx00,fscal,fix0);
354 fiy0 = _mm_macc_pd(dy00,fscal,fiy0);
355 fiz0 = _mm_macc_pd(dz00,fscal,fiz0);
357 fjx0 = _mm_macc_pd(dx00,fscal,fjx0);
358 fjy0 = _mm_macc_pd(dy00,fscal,fjy0);
359 fjz0 = _mm_macc_pd(dz00,fscal,fjz0);
361 /**************************
362 * CALCULATE INTERACTIONS *
363 **************************/
365 r01 = _mm_mul_pd(rsq01,rinv01);
367 /* EWALD ELECTROSTATICS */
369 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
370 ewrt = _mm_mul_pd(r01,ewtabscale);
371 ewitab = _mm_cvttpd_epi32(ewrt);
373 eweps = _mm_frcz_pd(ewrt);
375 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
377 twoeweps = _mm_add_pd(eweps,eweps);
378 ewitab = _mm_slli_epi32(ewitab,2);
379 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
380 ewtabD = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
381 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
382 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
383 ewtabFn = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,1) +2);
384 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
385 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
386 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
387 velec = _mm_mul_pd(qq01,_mm_sub_pd(rinv01,velec));
388 felec = _mm_mul_pd(_mm_mul_pd(qq01,rinv01),_mm_sub_pd(rinvsq01,felec));
390 /* Update potential sum for this i atom from the interaction with this j atom. */
391 velecsum = _mm_add_pd(velecsum,velec);
395 /* Update vectorial force */
396 fix0 = _mm_macc_pd(dx01,fscal,fix0);
397 fiy0 = _mm_macc_pd(dy01,fscal,fiy0);
398 fiz0 = _mm_macc_pd(dz01,fscal,fiz0);
400 fjx1 = _mm_macc_pd(dx01,fscal,fjx1);
401 fjy1 = _mm_macc_pd(dy01,fscal,fjy1);
402 fjz1 = _mm_macc_pd(dz01,fscal,fjz1);
404 /**************************
405 * CALCULATE INTERACTIONS *
406 **************************/
408 r02 = _mm_mul_pd(rsq02,rinv02);
410 /* EWALD ELECTROSTATICS */
412 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
413 ewrt = _mm_mul_pd(r02,ewtabscale);
414 ewitab = _mm_cvttpd_epi32(ewrt);
416 eweps = _mm_frcz_pd(ewrt);
418 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
420 twoeweps = _mm_add_pd(eweps,eweps);
421 ewitab = _mm_slli_epi32(ewitab,2);
422 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
423 ewtabD = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
424 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
425 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
426 ewtabFn = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,1) +2);
427 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
428 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
429 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
430 velec = _mm_mul_pd(qq02,_mm_sub_pd(rinv02,velec));
431 felec = _mm_mul_pd(_mm_mul_pd(qq02,rinv02),_mm_sub_pd(rinvsq02,felec));
433 /* Update potential sum for this i atom from the interaction with this j atom. */
434 velecsum = _mm_add_pd(velecsum,velec);
438 /* Update vectorial force */
439 fix0 = _mm_macc_pd(dx02,fscal,fix0);
440 fiy0 = _mm_macc_pd(dy02,fscal,fiy0);
441 fiz0 = _mm_macc_pd(dz02,fscal,fiz0);
443 fjx2 = _mm_macc_pd(dx02,fscal,fjx2);
444 fjy2 = _mm_macc_pd(dy02,fscal,fjy2);
445 fjz2 = _mm_macc_pd(dz02,fscal,fjz2);
447 /**************************
448 * CALCULATE INTERACTIONS *
449 **************************/
451 r10 = _mm_mul_pd(rsq10,rinv10);
453 /* EWALD ELECTROSTATICS */
455 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
456 ewrt = _mm_mul_pd(r10,ewtabscale);
457 ewitab = _mm_cvttpd_epi32(ewrt);
459 eweps = _mm_frcz_pd(ewrt);
461 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
463 twoeweps = _mm_add_pd(eweps,eweps);
464 ewitab = _mm_slli_epi32(ewitab,2);
465 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
466 ewtabD = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
467 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
468 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
469 ewtabFn = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,1) +2);
470 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
471 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
472 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
473 velec = _mm_mul_pd(qq10,_mm_sub_pd(rinv10,velec));
474 felec = _mm_mul_pd(_mm_mul_pd(qq10,rinv10),_mm_sub_pd(rinvsq10,felec));
476 /* Update potential sum for this i atom from the interaction with this j atom. */
477 velecsum = _mm_add_pd(velecsum,velec);
481 /* Update vectorial force */
482 fix1 = _mm_macc_pd(dx10,fscal,fix1);
483 fiy1 = _mm_macc_pd(dy10,fscal,fiy1);
484 fiz1 = _mm_macc_pd(dz10,fscal,fiz1);
486 fjx0 = _mm_macc_pd(dx10,fscal,fjx0);
487 fjy0 = _mm_macc_pd(dy10,fscal,fjy0);
488 fjz0 = _mm_macc_pd(dz10,fscal,fjz0);
490 /**************************
491 * CALCULATE INTERACTIONS *
492 **************************/
494 r11 = _mm_mul_pd(rsq11,rinv11);
496 /* EWALD ELECTROSTATICS */
498 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
499 ewrt = _mm_mul_pd(r11,ewtabscale);
500 ewitab = _mm_cvttpd_epi32(ewrt);
502 eweps = _mm_frcz_pd(ewrt);
504 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
506 twoeweps = _mm_add_pd(eweps,eweps);
507 ewitab = _mm_slli_epi32(ewitab,2);
508 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
509 ewtabD = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
510 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
511 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
512 ewtabFn = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,1) +2);
513 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
514 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
515 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
516 velec = _mm_mul_pd(qq11,_mm_sub_pd(rinv11,velec));
517 felec = _mm_mul_pd(_mm_mul_pd(qq11,rinv11),_mm_sub_pd(rinvsq11,felec));
519 /* Update potential sum for this i atom from the interaction with this j atom. */
520 velecsum = _mm_add_pd(velecsum,velec);
524 /* Update vectorial force */
525 fix1 = _mm_macc_pd(dx11,fscal,fix1);
526 fiy1 = _mm_macc_pd(dy11,fscal,fiy1);
527 fiz1 = _mm_macc_pd(dz11,fscal,fiz1);
529 fjx1 = _mm_macc_pd(dx11,fscal,fjx1);
530 fjy1 = _mm_macc_pd(dy11,fscal,fjy1);
531 fjz1 = _mm_macc_pd(dz11,fscal,fjz1);
533 /**************************
534 * CALCULATE INTERACTIONS *
535 **************************/
537 r12 = _mm_mul_pd(rsq12,rinv12);
539 /* EWALD ELECTROSTATICS */
541 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
542 ewrt = _mm_mul_pd(r12,ewtabscale);
543 ewitab = _mm_cvttpd_epi32(ewrt);
545 eweps = _mm_frcz_pd(ewrt);
547 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
549 twoeweps = _mm_add_pd(eweps,eweps);
550 ewitab = _mm_slli_epi32(ewitab,2);
551 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
552 ewtabD = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
553 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
554 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
555 ewtabFn = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,1) +2);
556 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
557 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
558 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
559 velec = _mm_mul_pd(qq12,_mm_sub_pd(rinv12,velec));
560 felec = _mm_mul_pd(_mm_mul_pd(qq12,rinv12),_mm_sub_pd(rinvsq12,felec));
562 /* Update potential sum for this i atom from the interaction with this j atom. */
563 velecsum = _mm_add_pd(velecsum,velec);
567 /* Update vectorial force */
568 fix1 = _mm_macc_pd(dx12,fscal,fix1);
569 fiy1 = _mm_macc_pd(dy12,fscal,fiy1);
570 fiz1 = _mm_macc_pd(dz12,fscal,fiz1);
572 fjx2 = _mm_macc_pd(dx12,fscal,fjx2);
573 fjy2 = _mm_macc_pd(dy12,fscal,fjy2);
574 fjz2 = _mm_macc_pd(dz12,fscal,fjz2);
576 /**************************
577 * CALCULATE INTERACTIONS *
578 **************************/
580 r20 = _mm_mul_pd(rsq20,rinv20);
582 /* EWALD ELECTROSTATICS */
584 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
585 ewrt = _mm_mul_pd(r20,ewtabscale);
586 ewitab = _mm_cvttpd_epi32(ewrt);
588 eweps = _mm_frcz_pd(ewrt);
590 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
592 twoeweps = _mm_add_pd(eweps,eweps);
593 ewitab = _mm_slli_epi32(ewitab,2);
594 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
595 ewtabD = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
596 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
597 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
598 ewtabFn = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,1) +2);
599 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
600 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
601 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
602 velec = _mm_mul_pd(qq20,_mm_sub_pd(rinv20,velec));
603 felec = _mm_mul_pd(_mm_mul_pd(qq20,rinv20),_mm_sub_pd(rinvsq20,felec));
605 /* Update potential sum for this i atom from the interaction with this j atom. */
606 velecsum = _mm_add_pd(velecsum,velec);
610 /* Update vectorial force */
611 fix2 = _mm_macc_pd(dx20,fscal,fix2);
612 fiy2 = _mm_macc_pd(dy20,fscal,fiy2);
613 fiz2 = _mm_macc_pd(dz20,fscal,fiz2);
615 fjx0 = _mm_macc_pd(dx20,fscal,fjx0);
616 fjy0 = _mm_macc_pd(dy20,fscal,fjy0);
617 fjz0 = _mm_macc_pd(dz20,fscal,fjz0);
619 /**************************
620 * CALCULATE INTERACTIONS *
621 **************************/
623 r21 = _mm_mul_pd(rsq21,rinv21);
625 /* EWALD ELECTROSTATICS */
627 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
628 ewrt = _mm_mul_pd(r21,ewtabscale);
629 ewitab = _mm_cvttpd_epi32(ewrt);
631 eweps = _mm_frcz_pd(ewrt);
633 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
635 twoeweps = _mm_add_pd(eweps,eweps);
636 ewitab = _mm_slli_epi32(ewitab,2);
637 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
638 ewtabD = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
639 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
640 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
641 ewtabFn = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,1) +2);
642 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
643 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
644 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
645 velec = _mm_mul_pd(qq21,_mm_sub_pd(rinv21,velec));
646 felec = _mm_mul_pd(_mm_mul_pd(qq21,rinv21),_mm_sub_pd(rinvsq21,felec));
648 /* Update potential sum for this i atom from the interaction with this j atom. */
649 velecsum = _mm_add_pd(velecsum,velec);
653 /* Update vectorial force */
654 fix2 = _mm_macc_pd(dx21,fscal,fix2);
655 fiy2 = _mm_macc_pd(dy21,fscal,fiy2);
656 fiz2 = _mm_macc_pd(dz21,fscal,fiz2);
658 fjx1 = _mm_macc_pd(dx21,fscal,fjx1);
659 fjy1 = _mm_macc_pd(dy21,fscal,fjy1);
660 fjz1 = _mm_macc_pd(dz21,fscal,fjz1);
662 /**************************
663 * CALCULATE INTERACTIONS *
664 **************************/
666 r22 = _mm_mul_pd(rsq22,rinv22);
668 /* EWALD ELECTROSTATICS */
670 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
671 ewrt = _mm_mul_pd(r22,ewtabscale);
672 ewitab = _mm_cvttpd_epi32(ewrt);
674 eweps = _mm_frcz_pd(ewrt);
676 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
678 twoeweps = _mm_add_pd(eweps,eweps);
679 ewitab = _mm_slli_epi32(ewitab,2);
680 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
681 ewtabD = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,1) );
682 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
683 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
684 ewtabFn = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,1) +2);
685 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
686 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
687 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
688 velec = _mm_mul_pd(qq22,_mm_sub_pd(rinv22,velec));
689 felec = _mm_mul_pd(_mm_mul_pd(qq22,rinv22),_mm_sub_pd(rinvsq22,felec));
691 /* Update potential sum for this i atom from the interaction with this j atom. */
692 velecsum = _mm_add_pd(velecsum,velec);
696 /* Update vectorial force */
697 fix2 = _mm_macc_pd(dx22,fscal,fix2);
698 fiy2 = _mm_macc_pd(dy22,fscal,fiy2);
699 fiz2 = _mm_macc_pd(dz22,fscal,fiz2);
701 fjx2 = _mm_macc_pd(dx22,fscal,fjx2);
702 fjy2 = _mm_macc_pd(dy22,fscal,fjy2);
703 fjz2 = _mm_macc_pd(dz22,fscal,fjz2);
705 gmx_mm_decrement_3rvec_2ptr_swizzle_pd(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
707 /* Inner loop uses 420 flops */
714 j_coord_offsetA = DIM*jnrA;
716 /* load j atom coordinates */
717 gmx_mm_load_3rvec_1ptr_swizzle_pd(x+j_coord_offsetA,
718 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
720 /* Calculate displacement vector */
721 dx00 = _mm_sub_pd(ix0,jx0);
722 dy00 = _mm_sub_pd(iy0,jy0);
723 dz00 = _mm_sub_pd(iz0,jz0);
724 dx01 = _mm_sub_pd(ix0,jx1);
725 dy01 = _mm_sub_pd(iy0,jy1);
726 dz01 = _mm_sub_pd(iz0,jz1);
727 dx02 = _mm_sub_pd(ix0,jx2);
728 dy02 = _mm_sub_pd(iy0,jy2);
729 dz02 = _mm_sub_pd(iz0,jz2);
730 dx10 = _mm_sub_pd(ix1,jx0);
731 dy10 = _mm_sub_pd(iy1,jy0);
732 dz10 = _mm_sub_pd(iz1,jz0);
733 dx11 = _mm_sub_pd(ix1,jx1);
734 dy11 = _mm_sub_pd(iy1,jy1);
735 dz11 = _mm_sub_pd(iz1,jz1);
736 dx12 = _mm_sub_pd(ix1,jx2);
737 dy12 = _mm_sub_pd(iy1,jy2);
738 dz12 = _mm_sub_pd(iz1,jz2);
739 dx20 = _mm_sub_pd(ix2,jx0);
740 dy20 = _mm_sub_pd(iy2,jy0);
741 dz20 = _mm_sub_pd(iz2,jz0);
742 dx21 = _mm_sub_pd(ix2,jx1);
743 dy21 = _mm_sub_pd(iy2,jy1);
744 dz21 = _mm_sub_pd(iz2,jz1);
745 dx22 = _mm_sub_pd(ix2,jx2);
746 dy22 = _mm_sub_pd(iy2,jy2);
747 dz22 = _mm_sub_pd(iz2,jz2);
749 /* Calculate squared distance and things based on it */
750 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
751 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
752 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
753 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
754 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
755 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
756 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
757 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
758 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
760 rinv00 = gmx_mm_invsqrt_pd(rsq00);
761 rinv01 = gmx_mm_invsqrt_pd(rsq01);
762 rinv02 = gmx_mm_invsqrt_pd(rsq02);
763 rinv10 = gmx_mm_invsqrt_pd(rsq10);
764 rinv11 = gmx_mm_invsqrt_pd(rsq11);
765 rinv12 = gmx_mm_invsqrt_pd(rsq12);
766 rinv20 = gmx_mm_invsqrt_pd(rsq20);
767 rinv21 = gmx_mm_invsqrt_pd(rsq21);
768 rinv22 = gmx_mm_invsqrt_pd(rsq22);
770 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
771 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
772 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
773 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
774 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
775 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
776 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
777 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
778 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
780 fjx0 = _mm_setzero_pd();
781 fjy0 = _mm_setzero_pd();
782 fjz0 = _mm_setzero_pd();
783 fjx1 = _mm_setzero_pd();
784 fjy1 = _mm_setzero_pd();
785 fjz1 = _mm_setzero_pd();
786 fjx2 = _mm_setzero_pd();
787 fjy2 = _mm_setzero_pd();
788 fjz2 = _mm_setzero_pd();
790 /**************************
791 * CALCULATE INTERACTIONS *
792 **************************/
794 r00 = _mm_mul_pd(rsq00,rinv00);
796 /* EWALD ELECTROSTATICS */
798 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
799 ewrt = _mm_mul_pd(r00,ewtabscale);
800 ewitab = _mm_cvttpd_epi32(ewrt);
802 eweps = _mm_frcz_pd(ewrt);
804 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
806 twoeweps = _mm_add_pd(eweps,eweps);
807 ewitab = _mm_slli_epi32(ewitab,2);
808 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
809 ewtabD = _mm_setzero_pd();
810 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
811 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
812 ewtabFn = _mm_setzero_pd();
813 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
814 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
815 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
816 velec = _mm_mul_pd(qq00,_mm_sub_pd(rinv00,velec));
817 felec = _mm_mul_pd(_mm_mul_pd(qq00,rinv00),_mm_sub_pd(rinvsq00,felec));
819 /* Analytical LJ-PME */
820 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
821 ewcljrsq = _mm_mul_pd(ewclj2,rsq00);
822 ewclj6 = _mm_mul_pd(ewclj2,_mm_mul_pd(ewclj2,ewclj2));
823 exponent = gmx_simd_exp_d(ewcljrsq);
824 /* poly = exp(-(beta*r)^2) * (1 + (beta*r)^2 + (beta*r)^4 /2) */
825 poly = _mm_mul_pd(exponent,_mm_macc_pd(_mm_mul_pd(ewcljrsq,ewcljrsq),one_half,_mm_sub_pd(one,ewcljrsq)));
826 /* vvdw6 = [C6 - C6grid * (1-poly)]/r6 */
827 vvdw6 = _mm_mul_pd(_mm_macc_pd(-c6grid_00,_mm_sub_pd(one,poly),c6_00),rinvsix);
828 vvdw12 = _mm_mul_pd(c12_00,_mm_mul_pd(rinvsix,rinvsix));
829 vvdw = _mm_msub_pd(vvdw12,one_twelfth,_mm_mul_pd(vvdw6,one_sixth));
830 /* fvdw = vvdw12/r - (vvdw6/r + (C6grid * exponent * beta^6)/r) */
831 fvdw = _mm_mul_pd(_mm_add_pd(vvdw12,_mm_msub_pd(_mm_mul_pd(c6grid_00,one_sixth),_mm_mul_pd(exponent,ewclj6),vvdw6)),rinvsq00);
833 /* Update potential sum for this i atom from the interaction with this j atom. */
834 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
835 velecsum = _mm_add_pd(velecsum,velec);
836 vvdw = _mm_unpacklo_pd(vvdw,_mm_setzero_pd());
837 vvdwsum = _mm_add_pd(vvdwsum,vvdw);
839 fscal = _mm_add_pd(felec,fvdw);
841 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
843 /* Update vectorial force */
844 fix0 = _mm_macc_pd(dx00,fscal,fix0);
845 fiy0 = _mm_macc_pd(dy00,fscal,fiy0);
846 fiz0 = _mm_macc_pd(dz00,fscal,fiz0);
848 fjx0 = _mm_macc_pd(dx00,fscal,fjx0);
849 fjy0 = _mm_macc_pd(dy00,fscal,fjy0);
850 fjz0 = _mm_macc_pd(dz00,fscal,fjz0);
852 /**************************
853 * CALCULATE INTERACTIONS *
854 **************************/
856 r01 = _mm_mul_pd(rsq01,rinv01);
858 /* EWALD ELECTROSTATICS */
860 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
861 ewrt = _mm_mul_pd(r01,ewtabscale);
862 ewitab = _mm_cvttpd_epi32(ewrt);
864 eweps = _mm_frcz_pd(ewrt);
866 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
868 twoeweps = _mm_add_pd(eweps,eweps);
869 ewitab = _mm_slli_epi32(ewitab,2);
870 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
871 ewtabD = _mm_setzero_pd();
872 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
873 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
874 ewtabFn = _mm_setzero_pd();
875 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
876 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
877 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
878 velec = _mm_mul_pd(qq01,_mm_sub_pd(rinv01,velec));
879 felec = _mm_mul_pd(_mm_mul_pd(qq01,rinv01),_mm_sub_pd(rinvsq01,felec));
881 /* Update potential sum for this i atom from the interaction with this j atom. */
882 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
883 velecsum = _mm_add_pd(velecsum,velec);
887 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
889 /* Update vectorial force */
890 fix0 = _mm_macc_pd(dx01,fscal,fix0);
891 fiy0 = _mm_macc_pd(dy01,fscal,fiy0);
892 fiz0 = _mm_macc_pd(dz01,fscal,fiz0);
894 fjx1 = _mm_macc_pd(dx01,fscal,fjx1);
895 fjy1 = _mm_macc_pd(dy01,fscal,fjy1);
896 fjz1 = _mm_macc_pd(dz01,fscal,fjz1);
898 /**************************
899 * CALCULATE INTERACTIONS *
900 **************************/
902 r02 = _mm_mul_pd(rsq02,rinv02);
904 /* EWALD ELECTROSTATICS */
906 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
907 ewrt = _mm_mul_pd(r02,ewtabscale);
908 ewitab = _mm_cvttpd_epi32(ewrt);
910 eweps = _mm_frcz_pd(ewrt);
912 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
914 twoeweps = _mm_add_pd(eweps,eweps);
915 ewitab = _mm_slli_epi32(ewitab,2);
916 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
917 ewtabD = _mm_setzero_pd();
918 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
919 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
920 ewtabFn = _mm_setzero_pd();
921 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
922 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
923 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
924 velec = _mm_mul_pd(qq02,_mm_sub_pd(rinv02,velec));
925 felec = _mm_mul_pd(_mm_mul_pd(qq02,rinv02),_mm_sub_pd(rinvsq02,felec));
927 /* Update potential sum for this i atom from the interaction with this j atom. */
928 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
929 velecsum = _mm_add_pd(velecsum,velec);
933 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
935 /* Update vectorial force */
936 fix0 = _mm_macc_pd(dx02,fscal,fix0);
937 fiy0 = _mm_macc_pd(dy02,fscal,fiy0);
938 fiz0 = _mm_macc_pd(dz02,fscal,fiz0);
940 fjx2 = _mm_macc_pd(dx02,fscal,fjx2);
941 fjy2 = _mm_macc_pd(dy02,fscal,fjy2);
942 fjz2 = _mm_macc_pd(dz02,fscal,fjz2);
944 /**************************
945 * CALCULATE INTERACTIONS *
946 **************************/
948 r10 = _mm_mul_pd(rsq10,rinv10);
950 /* EWALD ELECTROSTATICS */
952 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
953 ewrt = _mm_mul_pd(r10,ewtabscale);
954 ewitab = _mm_cvttpd_epi32(ewrt);
956 eweps = _mm_frcz_pd(ewrt);
958 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
960 twoeweps = _mm_add_pd(eweps,eweps);
961 ewitab = _mm_slli_epi32(ewitab,2);
962 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
963 ewtabD = _mm_setzero_pd();
964 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
965 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
966 ewtabFn = _mm_setzero_pd();
967 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
968 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
969 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
970 velec = _mm_mul_pd(qq10,_mm_sub_pd(rinv10,velec));
971 felec = _mm_mul_pd(_mm_mul_pd(qq10,rinv10),_mm_sub_pd(rinvsq10,felec));
973 /* Update potential sum for this i atom from the interaction with this j atom. */
974 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
975 velecsum = _mm_add_pd(velecsum,velec);
979 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
981 /* Update vectorial force */
982 fix1 = _mm_macc_pd(dx10,fscal,fix1);
983 fiy1 = _mm_macc_pd(dy10,fscal,fiy1);
984 fiz1 = _mm_macc_pd(dz10,fscal,fiz1);
986 fjx0 = _mm_macc_pd(dx10,fscal,fjx0);
987 fjy0 = _mm_macc_pd(dy10,fscal,fjy0);
988 fjz0 = _mm_macc_pd(dz10,fscal,fjz0);
990 /**************************
991 * CALCULATE INTERACTIONS *
992 **************************/
994 r11 = _mm_mul_pd(rsq11,rinv11);
996 /* EWALD ELECTROSTATICS */
998 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
999 ewrt = _mm_mul_pd(r11,ewtabscale);
1000 ewitab = _mm_cvttpd_epi32(ewrt);
1002 eweps = _mm_frcz_pd(ewrt);
1004 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1006 twoeweps = _mm_add_pd(eweps,eweps);
1007 ewitab = _mm_slli_epi32(ewitab,2);
1008 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
1009 ewtabD = _mm_setzero_pd();
1010 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
1011 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
1012 ewtabFn = _mm_setzero_pd();
1013 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
1014 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
1015 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
1016 velec = _mm_mul_pd(qq11,_mm_sub_pd(rinv11,velec));
1017 felec = _mm_mul_pd(_mm_mul_pd(qq11,rinv11),_mm_sub_pd(rinvsq11,felec));
1019 /* Update potential sum for this i atom from the interaction with this j atom. */
1020 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
1021 velecsum = _mm_add_pd(velecsum,velec);
1025 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1027 /* Update vectorial force */
1028 fix1 = _mm_macc_pd(dx11,fscal,fix1);
1029 fiy1 = _mm_macc_pd(dy11,fscal,fiy1);
1030 fiz1 = _mm_macc_pd(dz11,fscal,fiz1);
1032 fjx1 = _mm_macc_pd(dx11,fscal,fjx1);
1033 fjy1 = _mm_macc_pd(dy11,fscal,fjy1);
1034 fjz1 = _mm_macc_pd(dz11,fscal,fjz1);
1036 /**************************
1037 * CALCULATE INTERACTIONS *
1038 **************************/
1040 r12 = _mm_mul_pd(rsq12,rinv12);
1042 /* EWALD ELECTROSTATICS */
1044 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1045 ewrt = _mm_mul_pd(r12,ewtabscale);
1046 ewitab = _mm_cvttpd_epi32(ewrt);
1048 eweps = _mm_frcz_pd(ewrt);
1050 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1052 twoeweps = _mm_add_pd(eweps,eweps);
1053 ewitab = _mm_slli_epi32(ewitab,2);
1054 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
1055 ewtabD = _mm_setzero_pd();
1056 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
1057 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
1058 ewtabFn = _mm_setzero_pd();
1059 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
1060 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
1061 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
1062 velec = _mm_mul_pd(qq12,_mm_sub_pd(rinv12,velec));
1063 felec = _mm_mul_pd(_mm_mul_pd(qq12,rinv12),_mm_sub_pd(rinvsq12,felec));
1065 /* Update potential sum for this i atom from the interaction with this j atom. */
1066 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
1067 velecsum = _mm_add_pd(velecsum,velec);
1071 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1073 /* Update vectorial force */
1074 fix1 = _mm_macc_pd(dx12,fscal,fix1);
1075 fiy1 = _mm_macc_pd(dy12,fscal,fiy1);
1076 fiz1 = _mm_macc_pd(dz12,fscal,fiz1);
1078 fjx2 = _mm_macc_pd(dx12,fscal,fjx2);
1079 fjy2 = _mm_macc_pd(dy12,fscal,fjy2);
1080 fjz2 = _mm_macc_pd(dz12,fscal,fjz2);
1082 /**************************
1083 * CALCULATE INTERACTIONS *
1084 **************************/
1086 r20 = _mm_mul_pd(rsq20,rinv20);
1088 /* EWALD ELECTROSTATICS */
1090 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1091 ewrt = _mm_mul_pd(r20,ewtabscale);
1092 ewitab = _mm_cvttpd_epi32(ewrt);
1094 eweps = _mm_frcz_pd(ewrt);
1096 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1098 twoeweps = _mm_add_pd(eweps,eweps);
1099 ewitab = _mm_slli_epi32(ewitab,2);
1100 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
1101 ewtabD = _mm_setzero_pd();
1102 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
1103 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
1104 ewtabFn = _mm_setzero_pd();
1105 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
1106 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
1107 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
1108 velec = _mm_mul_pd(qq20,_mm_sub_pd(rinv20,velec));
1109 felec = _mm_mul_pd(_mm_mul_pd(qq20,rinv20),_mm_sub_pd(rinvsq20,felec));
1111 /* Update potential sum for this i atom from the interaction with this j atom. */
1112 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
1113 velecsum = _mm_add_pd(velecsum,velec);
1117 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1119 /* Update vectorial force */
1120 fix2 = _mm_macc_pd(dx20,fscal,fix2);
1121 fiy2 = _mm_macc_pd(dy20,fscal,fiy2);
1122 fiz2 = _mm_macc_pd(dz20,fscal,fiz2);
1124 fjx0 = _mm_macc_pd(dx20,fscal,fjx0);
1125 fjy0 = _mm_macc_pd(dy20,fscal,fjy0);
1126 fjz0 = _mm_macc_pd(dz20,fscal,fjz0);
1128 /**************************
1129 * CALCULATE INTERACTIONS *
1130 **************************/
1132 r21 = _mm_mul_pd(rsq21,rinv21);
1134 /* EWALD ELECTROSTATICS */
1136 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1137 ewrt = _mm_mul_pd(r21,ewtabscale);
1138 ewitab = _mm_cvttpd_epi32(ewrt);
1140 eweps = _mm_frcz_pd(ewrt);
1142 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1144 twoeweps = _mm_add_pd(eweps,eweps);
1145 ewitab = _mm_slli_epi32(ewitab,2);
1146 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
1147 ewtabD = _mm_setzero_pd();
1148 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
1149 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
1150 ewtabFn = _mm_setzero_pd();
1151 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
1152 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
1153 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
1154 velec = _mm_mul_pd(qq21,_mm_sub_pd(rinv21,velec));
1155 felec = _mm_mul_pd(_mm_mul_pd(qq21,rinv21),_mm_sub_pd(rinvsq21,felec));
1157 /* Update potential sum for this i atom from the interaction with this j atom. */
1158 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
1159 velecsum = _mm_add_pd(velecsum,velec);
1163 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1165 /* Update vectorial force */
1166 fix2 = _mm_macc_pd(dx21,fscal,fix2);
1167 fiy2 = _mm_macc_pd(dy21,fscal,fiy2);
1168 fiz2 = _mm_macc_pd(dz21,fscal,fiz2);
1170 fjx1 = _mm_macc_pd(dx21,fscal,fjx1);
1171 fjy1 = _mm_macc_pd(dy21,fscal,fjy1);
1172 fjz1 = _mm_macc_pd(dz21,fscal,fjz1);
1174 /**************************
1175 * CALCULATE INTERACTIONS *
1176 **************************/
1178 r22 = _mm_mul_pd(rsq22,rinv22);
1180 /* EWALD ELECTROSTATICS */
1182 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1183 ewrt = _mm_mul_pd(r22,ewtabscale);
1184 ewitab = _mm_cvttpd_epi32(ewrt);
1186 eweps = _mm_frcz_pd(ewrt);
1188 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1190 twoeweps = _mm_add_pd(eweps,eweps);
1191 ewitab = _mm_slli_epi32(ewitab,2);
1192 ewtabF = _mm_load_pd( ewtab + _mm_extract_epi32(ewitab,0) );
1193 ewtabD = _mm_setzero_pd();
1194 GMX_MM_TRANSPOSE2_PD(ewtabF,ewtabD);
1195 ewtabV = _mm_load_sd( ewtab + _mm_extract_epi32(ewitab,0) +2);
1196 ewtabFn = _mm_setzero_pd();
1197 GMX_MM_TRANSPOSE2_PD(ewtabV,ewtabFn);
1198 felec = _mm_macc_pd(eweps,ewtabD,ewtabF);
1199 velec = _mm_nmacc_pd(_mm_mul_pd(ewtabhalfspace,eweps) ,_mm_add_pd(ewtabF,felec), ewtabV);
1200 velec = _mm_mul_pd(qq22,_mm_sub_pd(rinv22,velec));
1201 felec = _mm_mul_pd(_mm_mul_pd(qq22,rinv22),_mm_sub_pd(rinvsq22,felec));
1203 /* Update potential sum for this i atom from the interaction with this j atom. */
1204 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
1205 velecsum = _mm_add_pd(velecsum,velec);
1209 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1211 /* Update vectorial force */
1212 fix2 = _mm_macc_pd(dx22,fscal,fix2);
1213 fiy2 = _mm_macc_pd(dy22,fscal,fiy2);
1214 fiz2 = _mm_macc_pd(dz22,fscal,fiz2);
1216 fjx2 = _mm_macc_pd(dx22,fscal,fjx2);
1217 fjy2 = _mm_macc_pd(dy22,fscal,fjy2);
1218 fjz2 = _mm_macc_pd(dz22,fscal,fjz2);
1220 gmx_mm_decrement_3rvec_1ptr_swizzle_pd(f+j_coord_offsetA,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1222 /* Inner loop uses 420 flops */
1225 /* End of innermost loop */
1227 gmx_mm_update_iforce_3atom_swizzle_pd(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1228 f+i_coord_offset,fshift+i_shift_offset);
1231 /* Update potential energies */
1232 gmx_mm_update_1pot_pd(velecsum,kernel_data->energygrp_elec+ggid);
1233 gmx_mm_update_1pot_pd(vvdwsum,kernel_data->energygrp_vdw+ggid);
1235 /* Increment number of inner iterations */
1236 inneriter += j_index_end - j_index_start;
1238 /* Outer loop uses 20 flops */
1241 /* Increment number of outer iterations */
1244 /* Update outer/inner flops */
1246 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_VF,outeriter*20 + inneriter*420);
1249 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwLJEw_GeomW3W3_F_avx_128_fma_double
1250 * Electrostatics interaction: Ewald
1251 * VdW interaction: LJEwald
1252 * Geometry: Water3-Water3
1253 * Calculate force/pot: Force
1256 nb_kernel_ElecEw_VdwLJEw_GeomW3W3_F_avx_128_fma_double
1257 (t_nblist * gmx_restrict nlist,
1258 rvec * gmx_restrict xx,
1259 rvec * gmx_restrict ff,
1260 t_forcerec * gmx_restrict fr,
1261 t_mdatoms * gmx_restrict mdatoms,
1262 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
1263 t_nrnb * gmx_restrict nrnb)
1265 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
1266 * just 0 for non-waters.
1267 * Suffixes A,B refer to j loop unrolling done with SSE double precision, e.g. for the two different
1268 * jnr indices corresponding to data put in the four positions in the SIMD register.
1270 int i_shift_offset,i_coord_offset,outeriter,inneriter;
1271 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1273 int j_coord_offsetA,j_coord_offsetB;
1274 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
1275 real rcutoff_scalar;
1276 real *shiftvec,*fshift,*x,*f;
1277 __m128d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
1279 __m128d ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
1281 __m128d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1283 __m128d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1284 int vdwjidx0A,vdwjidx0B;
1285 __m128d jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
1286 int vdwjidx1A,vdwjidx1B;
1287 __m128d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1288 int vdwjidx2A,vdwjidx2B;
1289 __m128d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1290 __m128d dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
1291 __m128d dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
1292 __m128d dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
1293 __m128d dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
1294 __m128d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1295 __m128d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1296 __m128d dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
1297 __m128d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1298 __m128d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1299 __m128d velec,felec,velecsum,facel,crf,krf,krf2;
1302 __m128d rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
1305 __m128d one_sixth = _mm_set1_pd(1.0/6.0);
1306 __m128d one_twelfth = _mm_set1_pd(1.0/12.0);
1317 __m128d ewclj,ewclj2,ewclj6,ewcljrsq,poly,exponent,f6A,f6B,sh_lj_ewald;
1318 __m128d one_half = _mm_set1_pd(0.5);
1319 __m128d minus_one = _mm_set1_pd(-1.0);
1321 __m128d ewtabscale,eweps,twoeweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
1323 __m128d dummy_mask,cutoff_mask;
1324 __m128d signbit = gmx_mm_castsi128_pd( _mm_set_epi32(0x80000000,0x00000000,0x80000000,0x00000000) );
1325 __m128d one = _mm_set1_pd(1.0);
1326 __m128d two = _mm_set1_pd(2.0);
1332 jindex = nlist->jindex;
1334 shiftidx = nlist->shift;
1336 shiftvec = fr->shift_vec[0];
1337 fshift = fr->fshift[0];
1338 facel = _mm_set1_pd(fr->epsfac);
1339 charge = mdatoms->chargeA;
1340 nvdwtype = fr->ntype;
1341 vdwparam = fr->nbfp;
1342 vdwtype = mdatoms->typeA;
1343 vdwgridparam = fr->ljpme_c6grid;
1344 sh_lj_ewald = _mm_set1_pd(fr->ic->sh_lj_ewald);
1345 ewclj = _mm_set1_pd(fr->ewaldcoeff_lj);
1346 ewclj2 = _mm_mul_pd(minus_one,_mm_mul_pd(ewclj,ewclj));
1348 sh_ewald = _mm_set1_pd(fr->ic->sh_ewald);
1349 ewtab = fr->ic->tabq_coul_F;
1350 ewtabscale = _mm_set1_pd(fr->ic->tabq_scale);
1351 ewtabhalfspace = _mm_set1_pd(0.5/fr->ic->tabq_scale);
1353 /* Setup water-specific parameters */
1354 inr = nlist->iinr[0];
1355 iq0 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+0]));
1356 iq1 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+1]));
1357 iq2 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+2]));
1358 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
1360 jq0 = _mm_set1_pd(charge[inr+0]);
1361 jq1 = _mm_set1_pd(charge[inr+1]);
1362 jq2 = _mm_set1_pd(charge[inr+2]);
1363 vdwjidx0A = 2*vdwtype[inr+0];
1364 qq00 = _mm_mul_pd(iq0,jq0);
1365 c6_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A]);
1366 c12_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A+1]);
1367 c6grid_00 = _mm_set1_pd(vdwgridparam[vdwioffset0+vdwjidx0A]);
1368 qq01 = _mm_mul_pd(iq0,jq1);
1369 qq02 = _mm_mul_pd(iq0,jq2);
1370 qq10 = _mm_mul_pd(iq1,jq0);
1371 qq11 = _mm_mul_pd(iq1,jq1);
1372 qq12 = _mm_mul_pd(iq1,jq2);
1373 qq20 = _mm_mul_pd(iq2,jq0);
1374 qq21 = _mm_mul_pd(iq2,jq1);
1375 qq22 = _mm_mul_pd(iq2,jq2);
1377 /* Avoid stupid compiler warnings */
1379 j_coord_offsetA = 0;
1380 j_coord_offsetB = 0;
1385 /* Start outer loop over neighborlists */
1386 for(iidx=0; iidx<nri; iidx++)
1388 /* Load shift vector for this list */
1389 i_shift_offset = DIM*shiftidx[iidx];
1391 /* Load limits for loop over neighbors */
1392 j_index_start = jindex[iidx];
1393 j_index_end = jindex[iidx+1];
1395 /* Get outer coordinate index */
1397 i_coord_offset = DIM*inr;
1399 /* Load i particle coords and add shift vector */
1400 gmx_mm_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset,
1401 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
1403 fix0 = _mm_setzero_pd();
1404 fiy0 = _mm_setzero_pd();
1405 fiz0 = _mm_setzero_pd();
1406 fix1 = _mm_setzero_pd();
1407 fiy1 = _mm_setzero_pd();
1408 fiz1 = _mm_setzero_pd();
1409 fix2 = _mm_setzero_pd();
1410 fiy2 = _mm_setzero_pd();
1411 fiz2 = _mm_setzero_pd();
1413 /* Start inner kernel loop */
1414 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
1417 /* Get j neighbor index, and coordinate index */
1419 jnrB = jjnr[jidx+1];
1420 j_coord_offsetA = DIM*jnrA;
1421 j_coord_offsetB = DIM*jnrB;
1423 /* load j atom coordinates */
1424 gmx_mm_load_3rvec_2ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
1425 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1427 /* Calculate displacement vector */
1428 dx00 = _mm_sub_pd(ix0,jx0);
1429 dy00 = _mm_sub_pd(iy0,jy0);
1430 dz00 = _mm_sub_pd(iz0,jz0);
1431 dx01 = _mm_sub_pd(ix0,jx1);
1432 dy01 = _mm_sub_pd(iy0,jy1);
1433 dz01 = _mm_sub_pd(iz0,jz1);
1434 dx02 = _mm_sub_pd(ix0,jx2);
1435 dy02 = _mm_sub_pd(iy0,jy2);
1436 dz02 = _mm_sub_pd(iz0,jz2);
1437 dx10 = _mm_sub_pd(ix1,jx0);
1438 dy10 = _mm_sub_pd(iy1,jy0);
1439 dz10 = _mm_sub_pd(iz1,jz0);
1440 dx11 = _mm_sub_pd(ix1,jx1);
1441 dy11 = _mm_sub_pd(iy1,jy1);
1442 dz11 = _mm_sub_pd(iz1,jz1);
1443 dx12 = _mm_sub_pd(ix1,jx2);
1444 dy12 = _mm_sub_pd(iy1,jy2);
1445 dz12 = _mm_sub_pd(iz1,jz2);
1446 dx20 = _mm_sub_pd(ix2,jx0);
1447 dy20 = _mm_sub_pd(iy2,jy0);
1448 dz20 = _mm_sub_pd(iz2,jz0);
1449 dx21 = _mm_sub_pd(ix2,jx1);
1450 dy21 = _mm_sub_pd(iy2,jy1);
1451 dz21 = _mm_sub_pd(iz2,jz1);
1452 dx22 = _mm_sub_pd(ix2,jx2);
1453 dy22 = _mm_sub_pd(iy2,jy2);
1454 dz22 = _mm_sub_pd(iz2,jz2);
1456 /* Calculate squared distance and things based on it */
1457 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
1458 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
1459 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
1460 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
1461 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
1462 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
1463 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
1464 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
1465 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
1467 rinv00 = gmx_mm_invsqrt_pd(rsq00);
1468 rinv01 = gmx_mm_invsqrt_pd(rsq01);
1469 rinv02 = gmx_mm_invsqrt_pd(rsq02);
1470 rinv10 = gmx_mm_invsqrt_pd(rsq10);
1471 rinv11 = gmx_mm_invsqrt_pd(rsq11);
1472 rinv12 = gmx_mm_invsqrt_pd(rsq12);
1473 rinv20 = gmx_mm_invsqrt_pd(rsq20);
1474 rinv21 = gmx_mm_invsqrt_pd(rsq21);
1475 rinv22 = gmx_mm_invsqrt_pd(rsq22);
1477 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
1478 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
1479 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
1480 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
1481 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
1482 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
1483 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
1484 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
1485 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
1487 fjx0 = _mm_setzero_pd();
1488 fjy0 = _mm_setzero_pd();
1489 fjz0 = _mm_setzero_pd();
1490 fjx1 = _mm_setzero_pd();
1491 fjy1 = _mm_setzero_pd();
1492 fjz1 = _mm_setzero_pd();
1493 fjx2 = _mm_setzero_pd();
1494 fjy2 = _mm_setzero_pd();
1495 fjz2 = _mm_setzero_pd();
1497 /**************************
1498 * CALCULATE INTERACTIONS *
1499 **************************/
1501 r00 = _mm_mul_pd(rsq00,rinv00);
1503 /* EWALD ELECTROSTATICS */
1505 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1506 ewrt = _mm_mul_pd(r00,ewtabscale);
1507 ewitab = _mm_cvttpd_epi32(ewrt);
1509 eweps = _mm_frcz_pd(ewrt);
1511 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1513 twoeweps = _mm_add_pd(eweps,eweps);
1514 gmx_mm_load_2pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),ewtab+_mm_extract_epi32(ewitab,1),
1516 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
1517 felec = _mm_mul_pd(_mm_mul_pd(qq00,rinv00),_mm_sub_pd(rinvsq00,felec));
1519 /* Analytical LJ-PME */
1520 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
1521 ewcljrsq = _mm_mul_pd(ewclj2,rsq00);
1522 ewclj6 = _mm_mul_pd(ewclj2,_mm_mul_pd(ewclj2,ewclj2));
1523 exponent = gmx_simd_exp_d(ewcljrsq);
1524 /* poly = exp(-(beta*r)^2) * (1 + (beta*r)^2 + (beta*r)^4 /2) */
1525 poly = _mm_mul_pd(exponent,_mm_macc_pd(_mm_mul_pd(ewcljrsq,ewcljrsq),one_half,_mm_sub_pd(one,ewcljrsq)));
1526 /* f6A = 6 * C6grid * (1 - poly) */
1527 f6A = _mm_mul_pd(c6grid_00,_mm_sub_pd(one,poly));
1528 /* f6B = C6grid * exponent * beta^6 */
1529 f6B = _mm_mul_pd(_mm_mul_pd(c6grid_00,one_sixth),_mm_mul_pd(exponent,ewclj6));
1530 /* fvdw = 12*C12/r13 - ((6*C6 - f6A)/r6 + f6B)/r */
1531 fvdw = _mm_mul_pd(_mm_macc_pd(_mm_msub_pd(c12_00,rinvsix,_mm_sub_pd(c6_00,f6A)),rinvsix,f6B),rinvsq00);
1533 fscal = _mm_add_pd(felec,fvdw);
1535 /* Update vectorial force */
1536 fix0 = _mm_macc_pd(dx00,fscal,fix0);
1537 fiy0 = _mm_macc_pd(dy00,fscal,fiy0);
1538 fiz0 = _mm_macc_pd(dz00,fscal,fiz0);
1540 fjx0 = _mm_macc_pd(dx00,fscal,fjx0);
1541 fjy0 = _mm_macc_pd(dy00,fscal,fjy0);
1542 fjz0 = _mm_macc_pd(dz00,fscal,fjz0);
1544 /**************************
1545 * CALCULATE INTERACTIONS *
1546 **************************/
1548 r01 = _mm_mul_pd(rsq01,rinv01);
1550 /* EWALD ELECTROSTATICS */
1552 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1553 ewrt = _mm_mul_pd(r01,ewtabscale);
1554 ewitab = _mm_cvttpd_epi32(ewrt);
1556 eweps = _mm_frcz_pd(ewrt);
1558 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1560 twoeweps = _mm_add_pd(eweps,eweps);
1561 gmx_mm_load_2pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),ewtab+_mm_extract_epi32(ewitab,1),
1563 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
1564 felec = _mm_mul_pd(_mm_mul_pd(qq01,rinv01),_mm_sub_pd(rinvsq01,felec));
1568 /* Update vectorial force */
1569 fix0 = _mm_macc_pd(dx01,fscal,fix0);
1570 fiy0 = _mm_macc_pd(dy01,fscal,fiy0);
1571 fiz0 = _mm_macc_pd(dz01,fscal,fiz0);
1573 fjx1 = _mm_macc_pd(dx01,fscal,fjx1);
1574 fjy1 = _mm_macc_pd(dy01,fscal,fjy1);
1575 fjz1 = _mm_macc_pd(dz01,fscal,fjz1);
1577 /**************************
1578 * CALCULATE INTERACTIONS *
1579 **************************/
1581 r02 = _mm_mul_pd(rsq02,rinv02);
1583 /* EWALD ELECTROSTATICS */
1585 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1586 ewrt = _mm_mul_pd(r02,ewtabscale);
1587 ewitab = _mm_cvttpd_epi32(ewrt);
1589 eweps = _mm_frcz_pd(ewrt);
1591 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1593 twoeweps = _mm_add_pd(eweps,eweps);
1594 gmx_mm_load_2pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),ewtab+_mm_extract_epi32(ewitab,1),
1596 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
1597 felec = _mm_mul_pd(_mm_mul_pd(qq02,rinv02),_mm_sub_pd(rinvsq02,felec));
1601 /* Update vectorial force */
1602 fix0 = _mm_macc_pd(dx02,fscal,fix0);
1603 fiy0 = _mm_macc_pd(dy02,fscal,fiy0);
1604 fiz0 = _mm_macc_pd(dz02,fscal,fiz0);
1606 fjx2 = _mm_macc_pd(dx02,fscal,fjx2);
1607 fjy2 = _mm_macc_pd(dy02,fscal,fjy2);
1608 fjz2 = _mm_macc_pd(dz02,fscal,fjz2);
1610 /**************************
1611 * CALCULATE INTERACTIONS *
1612 **************************/
1614 r10 = _mm_mul_pd(rsq10,rinv10);
1616 /* EWALD ELECTROSTATICS */
1618 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1619 ewrt = _mm_mul_pd(r10,ewtabscale);
1620 ewitab = _mm_cvttpd_epi32(ewrt);
1622 eweps = _mm_frcz_pd(ewrt);
1624 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1626 twoeweps = _mm_add_pd(eweps,eweps);
1627 gmx_mm_load_2pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),ewtab+_mm_extract_epi32(ewitab,1),
1629 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
1630 felec = _mm_mul_pd(_mm_mul_pd(qq10,rinv10),_mm_sub_pd(rinvsq10,felec));
1634 /* Update vectorial force */
1635 fix1 = _mm_macc_pd(dx10,fscal,fix1);
1636 fiy1 = _mm_macc_pd(dy10,fscal,fiy1);
1637 fiz1 = _mm_macc_pd(dz10,fscal,fiz1);
1639 fjx0 = _mm_macc_pd(dx10,fscal,fjx0);
1640 fjy0 = _mm_macc_pd(dy10,fscal,fjy0);
1641 fjz0 = _mm_macc_pd(dz10,fscal,fjz0);
1643 /**************************
1644 * CALCULATE INTERACTIONS *
1645 **************************/
1647 r11 = _mm_mul_pd(rsq11,rinv11);
1649 /* EWALD ELECTROSTATICS */
1651 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1652 ewrt = _mm_mul_pd(r11,ewtabscale);
1653 ewitab = _mm_cvttpd_epi32(ewrt);
1655 eweps = _mm_frcz_pd(ewrt);
1657 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1659 twoeweps = _mm_add_pd(eweps,eweps);
1660 gmx_mm_load_2pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),ewtab+_mm_extract_epi32(ewitab,1),
1662 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
1663 felec = _mm_mul_pd(_mm_mul_pd(qq11,rinv11),_mm_sub_pd(rinvsq11,felec));
1667 /* Update vectorial force */
1668 fix1 = _mm_macc_pd(dx11,fscal,fix1);
1669 fiy1 = _mm_macc_pd(dy11,fscal,fiy1);
1670 fiz1 = _mm_macc_pd(dz11,fscal,fiz1);
1672 fjx1 = _mm_macc_pd(dx11,fscal,fjx1);
1673 fjy1 = _mm_macc_pd(dy11,fscal,fjy1);
1674 fjz1 = _mm_macc_pd(dz11,fscal,fjz1);
1676 /**************************
1677 * CALCULATE INTERACTIONS *
1678 **************************/
1680 r12 = _mm_mul_pd(rsq12,rinv12);
1682 /* EWALD ELECTROSTATICS */
1684 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1685 ewrt = _mm_mul_pd(r12,ewtabscale);
1686 ewitab = _mm_cvttpd_epi32(ewrt);
1688 eweps = _mm_frcz_pd(ewrt);
1690 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1692 twoeweps = _mm_add_pd(eweps,eweps);
1693 gmx_mm_load_2pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),ewtab+_mm_extract_epi32(ewitab,1),
1695 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
1696 felec = _mm_mul_pd(_mm_mul_pd(qq12,rinv12),_mm_sub_pd(rinvsq12,felec));
1700 /* Update vectorial force */
1701 fix1 = _mm_macc_pd(dx12,fscal,fix1);
1702 fiy1 = _mm_macc_pd(dy12,fscal,fiy1);
1703 fiz1 = _mm_macc_pd(dz12,fscal,fiz1);
1705 fjx2 = _mm_macc_pd(dx12,fscal,fjx2);
1706 fjy2 = _mm_macc_pd(dy12,fscal,fjy2);
1707 fjz2 = _mm_macc_pd(dz12,fscal,fjz2);
1709 /**************************
1710 * CALCULATE INTERACTIONS *
1711 **************************/
1713 r20 = _mm_mul_pd(rsq20,rinv20);
1715 /* EWALD ELECTROSTATICS */
1717 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1718 ewrt = _mm_mul_pd(r20,ewtabscale);
1719 ewitab = _mm_cvttpd_epi32(ewrt);
1721 eweps = _mm_frcz_pd(ewrt);
1723 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1725 twoeweps = _mm_add_pd(eweps,eweps);
1726 gmx_mm_load_2pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),ewtab+_mm_extract_epi32(ewitab,1),
1728 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
1729 felec = _mm_mul_pd(_mm_mul_pd(qq20,rinv20),_mm_sub_pd(rinvsq20,felec));
1733 /* Update vectorial force */
1734 fix2 = _mm_macc_pd(dx20,fscal,fix2);
1735 fiy2 = _mm_macc_pd(dy20,fscal,fiy2);
1736 fiz2 = _mm_macc_pd(dz20,fscal,fiz2);
1738 fjx0 = _mm_macc_pd(dx20,fscal,fjx0);
1739 fjy0 = _mm_macc_pd(dy20,fscal,fjy0);
1740 fjz0 = _mm_macc_pd(dz20,fscal,fjz0);
1742 /**************************
1743 * CALCULATE INTERACTIONS *
1744 **************************/
1746 r21 = _mm_mul_pd(rsq21,rinv21);
1748 /* EWALD ELECTROSTATICS */
1750 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1751 ewrt = _mm_mul_pd(r21,ewtabscale);
1752 ewitab = _mm_cvttpd_epi32(ewrt);
1754 eweps = _mm_frcz_pd(ewrt);
1756 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1758 twoeweps = _mm_add_pd(eweps,eweps);
1759 gmx_mm_load_2pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),ewtab+_mm_extract_epi32(ewitab,1),
1761 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
1762 felec = _mm_mul_pd(_mm_mul_pd(qq21,rinv21),_mm_sub_pd(rinvsq21,felec));
1766 /* Update vectorial force */
1767 fix2 = _mm_macc_pd(dx21,fscal,fix2);
1768 fiy2 = _mm_macc_pd(dy21,fscal,fiy2);
1769 fiz2 = _mm_macc_pd(dz21,fscal,fiz2);
1771 fjx1 = _mm_macc_pd(dx21,fscal,fjx1);
1772 fjy1 = _mm_macc_pd(dy21,fscal,fjy1);
1773 fjz1 = _mm_macc_pd(dz21,fscal,fjz1);
1775 /**************************
1776 * CALCULATE INTERACTIONS *
1777 **************************/
1779 r22 = _mm_mul_pd(rsq22,rinv22);
1781 /* EWALD ELECTROSTATICS */
1783 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1784 ewrt = _mm_mul_pd(r22,ewtabscale);
1785 ewitab = _mm_cvttpd_epi32(ewrt);
1787 eweps = _mm_frcz_pd(ewrt);
1789 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1791 twoeweps = _mm_add_pd(eweps,eweps);
1792 gmx_mm_load_2pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),ewtab+_mm_extract_epi32(ewitab,1),
1794 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
1795 felec = _mm_mul_pd(_mm_mul_pd(qq22,rinv22),_mm_sub_pd(rinvsq22,felec));
1799 /* Update vectorial force */
1800 fix2 = _mm_macc_pd(dx22,fscal,fix2);
1801 fiy2 = _mm_macc_pd(dy22,fscal,fiy2);
1802 fiz2 = _mm_macc_pd(dz22,fscal,fiz2);
1804 fjx2 = _mm_macc_pd(dx22,fscal,fjx2);
1805 fjy2 = _mm_macc_pd(dy22,fscal,fjy2);
1806 fjz2 = _mm_macc_pd(dz22,fscal,fjz2);
1808 gmx_mm_decrement_3rvec_2ptr_swizzle_pd(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1810 /* Inner loop uses 372 flops */
1813 if(jidx<j_index_end)
1817 j_coord_offsetA = DIM*jnrA;
1819 /* load j atom coordinates */
1820 gmx_mm_load_3rvec_1ptr_swizzle_pd(x+j_coord_offsetA,
1821 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1823 /* Calculate displacement vector */
1824 dx00 = _mm_sub_pd(ix0,jx0);
1825 dy00 = _mm_sub_pd(iy0,jy0);
1826 dz00 = _mm_sub_pd(iz0,jz0);
1827 dx01 = _mm_sub_pd(ix0,jx1);
1828 dy01 = _mm_sub_pd(iy0,jy1);
1829 dz01 = _mm_sub_pd(iz0,jz1);
1830 dx02 = _mm_sub_pd(ix0,jx2);
1831 dy02 = _mm_sub_pd(iy0,jy2);
1832 dz02 = _mm_sub_pd(iz0,jz2);
1833 dx10 = _mm_sub_pd(ix1,jx0);
1834 dy10 = _mm_sub_pd(iy1,jy0);
1835 dz10 = _mm_sub_pd(iz1,jz0);
1836 dx11 = _mm_sub_pd(ix1,jx1);
1837 dy11 = _mm_sub_pd(iy1,jy1);
1838 dz11 = _mm_sub_pd(iz1,jz1);
1839 dx12 = _mm_sub_pd(ix1,jx2);
1840 dy12 = _mm_sub_pd(iy1,jy2);
1841 dz12 = _mm_sub_pd(iz1,jz2);
1842 dx20 = _mm_sub_pd(ix2,jx0);
1843 dy20 = _mm_sub_pd(iy2,jy0);
1844 dz20 = _mm_sub_pd(iz2,jz0);
1845 dx21 = _mm_sub_pd(ix2,jx1);
1846 dy21 = _mm_sub_pd(iy2,jy1);
1847 dz21 = _mm_sub_pd(iz2,jz1);
1848 dx22 = _mm_sub_pd(ix2,jx2);
1849 dy22 = _mm_sub_pd(iy2,jy2);
1850 dz22 = _mm_sub_pd(iz2,jz2);
1852 /* Calculate squared distance and things based on it */
1853 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
1854 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
1855 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
1856 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
1857 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
1858 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
1859 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
1860 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
1861 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
1863 rinv00 = gmx_mm_invsqrt_pd(rsq00);
1864 rinv01 = gmx_mm_invsqrt_pd(rsq01);
1865 rinv02 = gmx_mm_invsqrt_pd(rsq02);
1866 rinv10 = gmx_mm_invsqrt_pd(rsq10);
1867 rinv11 = gmx_mm_invsqrt_pd(rsq11);
1868 rinv12 = gmx_mm_invsqrt_pd(rsq12);
1869 rinv20 = gmx_mm_invsqrt_pd(rsq20);
1870 rinv21 = gmx_mm_invsqrt_pd(rsq21);
1871 rinv22 = gmx_mm_invsqrt_pd(rsq22);
1873 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
1874 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
1875 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
1876 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
1877 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
1878 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
1879 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
1880 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
1881 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
1883 fjx0 = _mm_setzero_pd();
1884 fjy0 = _mm_setzero_pd();
1885 fjz0 = _mm_setzero_pd();
1886 fjx1 = _mm_setzero_pd();
1887 fjy1 = _mm_setzero_pd();
1888 fjz1 = _mm_setzero_pd();
1889 fjx2 = _mm_setzero_pd();
1890 fjy2 = _mm_setzero_pd();
1891 fjz2 = _mm_setzero_pd();
1893 /**************************
1894 * CALCULATE INTERACTIONS *
1895 **************************/
1897 r00 = _mm_mul_pd(rsq00,rinv00);
1899 /* EWALD ELECTROSTATICS */
1901 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1902 ewrt = _mm_mul_pd(r00,ewtabscale);
1903 ewitab = _mm_cvttpd_epi32(ewrt);
1905 eweps = _mm_frcz_pd(ewrt);
1907 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1909 twoeweps = _mm_add_pd(eweps,eweps);
1910 gmx_mm_load_1pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
1911 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
1912 felec = _mm_mul_pd(_mm_mul_pd(qq00,rinv00),_mm_sub_pd(rinvsq00,felec));
1914 /* Analytical LJ-PME */
1915 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
1916 ewcljrsq = _mm_mul_pd(ewclj2,rsq00);
1917 ewclj6 = _mm_mul_pd(ewclj2,_mm_mul_pd(ewclj2,ewclj2));
1918 exponent = gmx_simd_exp_d(ewcljrsq);
1919 /* poly = exp(-(beta*r)^2) * (1 + (beta*r)^2 + (beta*r)^4 /2) */
1920 poly = _mm_mul_pd(exponent,_mm_macc_pd(_mm_mul_pd(ewcljrsq,ewcljrsq),one_half,_mm_sub_pd(one,ewcljrsq)));
1921 /* f6A = 6 * C6grid * (1 - poly) */
1922 f6A = _mm_mul_pd(c6grid_00,_mm_sub_pd(one,poly));
1923 /* f6B = C6grid * exponent * beta^6 */
1924 f6B = _mm_mul_pd(_mm_mul_pd(c6grid_00,one_sixth),_mm_mul_pd(exponent,ewclj6));
1925 /* fvdw = 12*C12/r13 - ((6*C6 - f6A)/r6 + f6B)/r */
1926 fvdw = _mm_mul_pd(_mm_macc_pd(_mm_msub_pd(c12_00,rinvsix,_mm_sub_pd(c6_00,f6A)),rinvsix,f6B),rinvsq00);
1928 fscal = _mm_add_pd(felec,fvdw);
1930 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1932 /* Update vectorial force */
1933 fix0 = _mm_macc_pd(dx00,fscal,fix0);
1934 fiy0 = _mm_macc_pd(dy00,fscal,fiy0);
1935 fiz0 = _mm_macc_pd(dz00,fscal,fiz0);
1937 fjx0 = _mm_macc_pd(dx00,fscal,fjx0);
1938 fjy0 = _mm_macc_pd(dy00,fscal,fjy0);
1939 fjz0 = _mm_macc_pd(dz00,fscal,fjz0);
1941 /**************************
1942 * CALCULATE INTERACTIONS *
1943 **************************/
1945 r01 = _mm_mul_pd(rsq01,rinv01);
1947 /* EWALD ELECTROSTATICS */
1949 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1950 ewrt = _mm_mul_pd(r01,ewtabscale);
1951 ewitab = _mm_cvttpd_epi32(ewrt);
1953 eweps = _mm_frcz_pd(ewrt);
1955 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1957 twoeweps = _mm_add_pd(eweps,eweps);
1958 gmx_mm_load_1pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
1959 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
1960 felec = _mm_mul_pd(_mm_mul_pd(qq01,rinv01),_mm_sub_pd(rinvsq01,felec));
1964 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1966 /* Update vectorial force */
1967 fix0 = _mm_macc_pd(dx01,fscal,fix0);
1968 fiy0 = _mm_macc_pd(dy01,fscal,fiy0);
1969 fiz0 = _mm_macc_pd(dz01,fscal,fiz0);
1971 fjx1 = _mm_macc_pd(dx01,fscal,fjx1);
1972 fjy1 = _mm_macc_pd(dy01,fscal,fjy1);
1973 fjz1 = _mm_macc_pd(dz01,fscal,fjz1);
1975 /**************************
1976 * CALCULATE INTERACTIONS *
1977 **************************/
1979 r02 = _mm_mul_pd(rsq02,rinv02);
1981 /* EWALD ELECTROSTATICS */
1983 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1984 ewrt = _mm_mul_pd(r02,ewtabscale);
1985 ewitab = _mm_cvttpd_epi32(ewrt);
1987 eweps = _mm_frcz_pd(ewrt);
1989 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
1991 twoeweps = _mm_add_pd(eweps,eweps);
1992 gmx_mm_load_1pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
1993 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
1994 felec = _mm_mul_pd(_mm_mul_pd(qq02,rinv02),_mm_sub_pd(rinvsq02,felec));
1998 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
2000 /* Update vectorial force */
2001 fix0 = _mm_macc_pd(dx02,fscal,fix0);
2002 fiy0 = _mm_macc_pd(dy02,fscal,fiy0);
2003 fiz0 = _mm_macc_pd(dz02,fscal,fiz0);
2005 fjx2 = _mm_macc_pd(dx02,fscal,fjx2);
2006 fjy2 = _mm_macc_pd(dy02,fscal,fjy2);
2007 fjz2 = _mm_macc_pd(dz02,fscal,fjz2);
2009 /**************************
2010 * CALCULATE INTERACTIONS *
2011 **************************/
2013 r10 = _mm_mul_pd(rsq10,rinv10);
2015 /* EWALD ELECTROSTATICS */
2017 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2018 ewrt = _mm_mul_pd(r10,ewtabscale);
2019 ewitab = _mm_cvttpd_epi32(ewrt);
2021 eweps = _mm_frcz_pd(ewrt);
2023 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
2025 twoeweps = _mm_add_pd(eweps,eweps);
2026 gmx_mm_load_1pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
2027 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
2028 felec = _mm_mul_pd(_mm_mul_pd(qq10,rinv10),_mm_sub_pd(rinvsq10,felec));
2032 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
2034 /* Update vectorial force */
2035 fix1 = _mm_macc_pd(dx10,fscal,fix1);
2036 fiy1 = _mm_macc_pd(dy10,fscal,fiy1);
2037 fiz1 = _mm_macc_pd(dz10,fscal,fiz1);
2039 fjx0 = _mm_macc_pd(dx10,fscal,fjx0);
2040 fjy0 = _mm_macc_pd(dy10,fscal,fjy0);
2041 fjz0 = _mm_macc_pd(dz10,fscal,fjz0);
2043 /**************************
2044 * CALCULATE INTERACTIONS *
2045 **************************/
2047 r11 = _mm_mul_pd(rsq11,rinv11);
2049 /* EWALD ELECTROSTATICS */
2051 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2052 ewrt = _mm_mul_pd(r11,ewtabscale);
2053 ewitab = _mm_cvttpd_epi32(ewrt);
2055 eweps = _mm_frcz_pd(ewrt);
2057 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
2059 twoeweps = _mm_add_pd(eweps,eweps);
2060 gmx_mm_load_1pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
2061 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
2062 felec = _mm_mul_pd(_mm_mul_pd(qq11,rinv11),_mm_sub_pd(rinvsq11,felec));
2066 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
2068 /* Update vectorial force */
2069 fix1 = _mm_macc_pd(dx11,fscal,fix1);
2070 fiy1 = _mm_macc_pd(dy11,fscal,fiy1);
2071 fiz1 = _mm_macc_pd(dz11,fscal,fiz1);
2073 fjx1 = _mm_macc_pd(dx11,fscal,fjx1);
2074 fjy1 = _mm_macc_pd(dy11,fscal,fjy1);
2075 fjz1 = _mm_macc_pd(dz11,fscal,fjz1);
2077 /**************************
2078 * CALCULATE INTERACTIONS *
2079 **************************/
2081 r12 = _mm_mul_pd(rsq12,rinv12);
2083 /* EWALD ELECTROSTATICS */
2085 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2086 ewrt = _mm_mul_pd(r12,ewtabscale);
2087 ewitab = _mm_cvttpd_epi32(ewrt);
2089 eweps = _mm_frcz_pd(ewrt);
2091 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
2093 twoeweps = _mm_add_pd(eweps,eweps);
2094 gmx_mm_load_1pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
2095 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
2096 felec = _mm_mul_pd(_mm_mul_pd(qq12,rinv12),_mm_sub_pd(rinvsq12,felec));
2100 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
2102 /* Update vectorial force */
2103 fix1 = _mm_macc_pd(dx12,fscal,fix1);
2104 fiy1 = _mm_macc_pd(dy12,fscal,fiy1);
2105 fiz1 = _mm_macc_pd(dz12,fscal,fiz1);
2107 fjx2 = _mm_macc_pd(dx12,fscal,fjx2);
2108 fjy2 = _mm_macc_pd(dy12,fscal,fjy2);
2109 fjz2 = _mm_macc_pd(dz12,fscal,fjz2);
2111 /**************************
2112 * CALCULATE INTERACTIONS *
2113 **************************/
2115 r20 = _mm_mul_pd(rsq20,rinv20);
2117 /* EWALD ELECTROSTATICS */
2119 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2120 ewrt = _mm_mul_pd(r20,ewtabscale);
2121 ewitab = _mm_cvttpd_epi32(ewrt);
2123 eweps = _mm_frcz_pd(ewrt);
2125 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
2127 twoeweps = _mm_add_pd(eweps,eweps);
2128 gmx_mm_load_1pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
2129 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
2130 felec = _mm_mul_pd(_mm_mul_pd(qq20,rinv20),_mm_sub_pd(rinvsq20,felec));
2134 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
2136 /* Update vectorial force */
2137 fix2 = _mm_macc_pd(dx20,fscal,fix2);
2138 fiy2 = _mm_macc_pd(dy20,fscal,fiy2);
2139 fiz2 = _mm_macc_pd(dz20,fscal,fiz2);
2141 fjx0 = _mm_macc_pd(dx20,fscal,fjx0);
2142 fjy0 = _mm_macc_pd(dy20,fscal,fjy0);
2143 fjz0 = _mm_macc_pd(dz20,fscal,fjz0);
2145 /**************************
2146 * CALCULATE INTERACTIONS *
2147 **************************/
2149 r21 = _mm_mul_pd(rsq21,rinv21);
2151 /* EWALD ELECTROSTATICS */
2153 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2154 ewrt = _mm_mul_pd(r21,ewtabscale);
2155 ewitab = _mm_cvttpd_epi32(ewrt);
2157 eweps = _mm_frcz_pd(ewrt);
2159 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
2161 twoeweps = _mm_add_pd(eweps,eweps);
2162 gmx_mm_load_1pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
2163 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
2164 felec = _mm_mul_pd(_mm_mul_pd(qq21,rinv21),_mm_sub_pd(rinvsq21,felec));
2168 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
2170 /* Update vectorial force */
2171 fix2 = _mm_macc_pd(dx21,fscal,fix2);
2172 fiy2 = _mm_macc_pd(dy21,fscal,fiy2);
2173 fiz2 = _mm_macc_pd(dz21,fscal,fiz2);
2175 fjx1 = _mm_macc_pd(dx21,fscal,fjx1);
2176 fjy1 = _mm_macc_pd(dy21,fscal,fjy1);
2177 fjz1 = _mm_macc_pd(dz21,fscal,fjz1);
2179 /**************************
2180 * CALCULATE INTERACTIONS *
2181 **************************/
2183 r22 = _mm_mul_pd(rsq22,rinv22);
2185 /* EWALD ELECTROSTATICS */
2187 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2188 ewrt = _mm_mul_pd(r22,ewtabscale);
2189 ewitab = _mm_cvttpd_epi32(ewrt);
2191 eweps = _mm_frcz_pd(ewrt);
2193 eweps = _mm_sub_pd(ewrt,_mm_round_pd(ewrt, _MM_FROUND_FLOOR));
2195 twoeweps = _mm_add_pd(eweps,eweps);
2196 gmx_mm_load_1pair_swizzle_pd(ewtab+_mm_extract_epi32(ewitab,0),&ewtabF,&ewtabFn);
2197 felec = _mm_macc_pd(eweps,ewtabFn,_mm_mul_pd( _mm_sub_pd(one,eweps),ewtabF));
2198 felec = _mm_mul_pd(_mm_mul_pd(qq22,rinv22),_mm_sub_pd(rinvsq22,felec));
2202 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
2204 /* Update vectorial force */
2205 fix2 = _mm_macc_pd(dx22,fscal,fix2);
2206 fiy2 = _mm_macc_pd(dy22,fscal,fiy2);
2207 fiz2 = _mm_macc_pd(dz22,fscal,fiz2);
2209 fjx2 = _mm_macc_pd(dx22,fscal,fjx2);
2210 fjy2 = _mm_macc_pd(dy22,fscal,fjy2);
2211 fjz2 = _mm_macc_pd(dz22,fscal,fjz2);
2213 gmx_mm_decrement_3rvec_1ptr_swizzle_pd(f+j_coord_offsetA,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
2215 /* Inner loop uses 372 flops */
2218 /* End of innermost loop */
2220 gmx_mm_update_iforce_3atom_swizzle_pd(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
2221 f+i_coord_offset,fshift+i_shift_offset);
2223 /* Increment number of inner iterations */
2224 inneriter += j_index_end - j_index_start;
2226 /* Outer loop uses 18 flops */
2229 /* Increment number of outer iterations */
2232 /* Update outer/inner flops */
2234 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_F,outeriter*18 + inneriter*372);