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36 * Note: this file was generated by the GROMACS avx_128_fma_double kernel generator.
42 #include "../nb_kernel.h"
43 #include "types/simple.h"
44 #include "gromacs/math/vec.h"
47 #include "gromacs/simd/math_x86_avx_128_fma_double.h"
48 #include "kernelutil_x86_avx_128_fma_double.h"
51 * Gromacs nonbonded kernel: nb_kernel_ElecCoul_VdwLJ_GeomW3W3_VF_avx_128_fma_double
52 * Electrostatics interaction: Coulomb
53 * VdW interaction: LennardJones
54 * Geometry: Water3-Water3
55 * Calculate force/pot: PotentialAndForce
58 nb_kernel_ElecCoul_VdwLJ_GeomW3W3_VF_avx_128_fma_double
59 (t_nblist * gmx_restrict nlist,
60 rvec * gmx_restrict xx,
61 rvec * gmx_restrict ff,
62 t_forcerec * gmx_restrict fr,
63 t_mdatoms * gmx_restrict mdatoms,
64 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
65 t_nrnb * gmx_restrict nrnb)
67 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
68 * just 0 for non-waters.
69 * Suffixes A,B refer to j loop unrolling done with SSE double precision, e.g. for the two different
70 * jnr indices corresponding to data put in the four positions in the SIMD register.
72 int i_shift_offset,i_coord_offset,outeriter,inneriter;
73 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
75 int j_coord_offsetA,j_coord_offsetB;
76 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
78 real *shiftvec,*fshift,*x,*f;
79 __m128d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
81 __m128d ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
83 __m128d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
85 __m128d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
86 int vdwjidx0A,vdwjidx0B;
87 __m128d jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
88 int vdwjidx1A,vdwjidx1B;
89 __m128d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
90 int vdwjidx2A,vdwjidx2B;
91 __m128d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
92 __m128d dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
93 __m128d dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
94 __m128d dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
95 __m128d dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
96 __m128d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
97 __m128d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
98 __m128d dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
99 __m128d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
100 __m128d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
101 __m128d velec,felec,velecsum,facel,crf,krf,krf2;
104 __m128d rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
107 __m128d one_sixth = _mm_set1_pd(1.0/6.0);
108 __m128d one_twelfth = _mm_set1_pd(1.0/12.0);
109 __m128d dummy_mask,cutoff_mask;
110 __m128d signbit = gmx_mm_castsi128_pd( _mm_set_epi32(0x80000000,0x00000000,0x80000000,0x00000000) );
111 __m128d one = _mm_set1_pd(1.0);
112 __m128d two = _mm_set1_pd(2.0);
118 jindex = nlist->jindex;
120 shiftidx = nlist->shift;
122 shiftvec = fr->shift_vec[0];
123 fshift = fr->fshift[0];
124 facel = _mm_set1_pd(fr->epsfac);
125 charge = mdatoms->chargeA;
126 nvdwtype = fr->ntype;
128 vdwtype = mdatoms->typeA;
130 /* Setup water-specific parameters */
131 inr = nlist->iinr[0];
132 iq0 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+0]));
133 iq1 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+1]));
134 iq2 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+2]));
135 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
137 jq0 = _mm_set1_pd(charge[inr+0]);
138 jq1 = _mm_set1_pd(charge[inr+1]);
139 jq2 = _mm_set1_pd(charge[inr+2]);
140 vdwjidx0A = 2*vdwtype[inr+0];
141 qq00 = _mm_mul_pd(iq0,jq0);
142 c6_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A]);
143 c12_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A+1]);
144 qq01 = _mm_mul_pd(iq0,jq1);
145 qq02 = _mm_mul_pd(iq0,jq2);
146 qq10 = _mm_mul_pd(iq1,jq0);
147 qq11 = _mm_mul_pd(iq1,jq1);
148 qq12 = _mm_mul_pd(iq1,jq2);
149 qq20 = _mm_mul_pd(iq2,jq0);
150 qq21 = _mm_mul_pd(iq2,jq1);
151 qq22 = _mm_mul_pd(iq2,jq2);
153 /* Avoid stupid compiler warnings */
161 /* Start outer loop over neighborlists */
162 for(iidx=0; iidx<nri; iidx++)
164 /* Load shift vector for this list */
165 i_shift_offset = DIM*shiftidx[iidx];
167 /* Load limits for loop over neighbors */
168 j_index_start = jindex[iidx];
169 j_index_end = jindex[iidx+1];
171 /* Get outer coordinate index */
173 i_coord_offset = DIM*inr;
175 /* Load i particle coords and add shift vector */
176 gmx_mm_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset,
177 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
179 fix0 = _mm_setzero_pd();
180 fiy0 = _mm_setzero_pd();
181 fiz0 = _mm_setzero_pd();
182 fix1 = _mm_setzero_pd();
183 fiy1 = _mm_setzero_pd();
184 fiz1 = _mm_setzero_pd();
185 fix2 = _mm_setzero_pd();
186 fiy2 = _mm_setzero_pd();
187 fiz2 = _mm_setzero_pd();
189 /* Reset potential sums */
190 velecsum = _mm_setzero_pd();
191 vvdwsum = _mm_setzero_pd();
193 /* Start inner kernel loop */
194 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
197 /* Get j neighbor index, and coordinate index */
200 j_coord_offsetA = DIM*jnrA;
201 j_coord_offsetB = DIM*jnrB;
203 /* load j atom coordinates */
204 gmx_mm_load_3rvec_2ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
205 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
207 /* Calculate displacement vector */
208 dx00 = _mm_sub_pd(ix0,jx0);
209 dy00 = _mm_sub_pd(iy0,jy0);
210 dz00 = _mm_sub_pd(iz0,jz0);
211 dx01 = _mm_sub_pd(ix0,jx1);
212 dy01 = _mm_sub_pd(iy0,jy1);
213 dz01 = _mm_sub_pd(iz0,jz1);
214 dx02 = _mm_sub_pd(ix0,jx2);
215 dy02 = _mm_sub_pd(iy0,jy2);
216 dz02 = _mm_sub_pd(iz0,jz2);
217 dx10 = _mm_sub_pd(ix1,jx0);
218 dy10 = _mm_sub_pd(iy1,jy0);
219 dz10 = _mm_sub_pd(iz1,jz0);
220 dx11 = _mm_sub_pd(ix1,jx1);
221 dy11 = _mm_sub_pd(iy1,jy1);
222 dz11 = _mm_sub_pd(iz1,jz1);
223 dx12 = _mm_sub_pd(ix1,jx2);
224 dy12 = _mm_sub_pd(iy1,jy2);
225 dz12 = _mm_sub_pd(iz1,jz2);
226 dx20 = _mm_sub_pd(ix2,jx0);
227 dy20 = _mm_sub_pd(iy2,jy0);
228 dz20 = _mm_sub_pd(iz2,jz0);
229 dx21 = _mm_sub_pd(ix2,jx1);
230 dy21 = _mm_sub_pd(iy2,jy1);
231 dz21 = _mm_sub_pd(iz2,jz1);
232 dx22 = _mm_sub_pd(ix2,jx2);
233 dy22 = _mm_sub_pd(iy2,jy2);
234 dz22 = _mm_sub_pd(iz2,jz2);
236 /* Calculate squared distance and things based on it */
237 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
238 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
239 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
240 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
241 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
242 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
243 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
244 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
245 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
247 rinv00 = gmx_mm_invsqrt_pd(rsq00);
248 rinv01 = gmx_mm_invsqrt_pd(rsq01);
249 rinv02 = gmx_mm_invsqrt_pd(rsq02);
250 rinv10 = gmx_mm_invsqrt_pd(rsq10);
251 rinv11 = gmx_mm_invsqrt_pd(rsq11);
252 rinv12 = gmx_mm_invsqrt_pd(rsq12);
253 rinv20 = gmx_mm_invsqrt_pd(rsq20);
254 rinv21 = gmx_mm_invsqrt_pd(rsq21);
255 rinv22 = gmx_mm_invsqrt_pd(rsq22);
257 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
258 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
259 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
260 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
261 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
262 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
263 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
264 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
265 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
267 fjx0 = _mm_setzero_pd();
268 fjy0 = _mm_setzero_pd();
269 fjz0 = _mm_setzero_pd();
270 fjx1 = _mm_setzero_pd();
271 fjy1 = _mm_setzero_pd();
272 fjz1 = _mm_setzero_pd();
273 fjx2 = _mm_setzero_pd();
274 fjy2 = _mm_setzero_pd();
275 fjz2 = _mm_setzero_pd();
277 /**************************
278 * CALCULATE INTERACTIONS *
279 **************************/
281 /* COULOMB ELECTROSTATICS */
282 velec = _mm_mul_pd(qq00,rinv00);
283 felec = _mm_mul_pd(velec,rinvsq00);
285 /* LENNARD-JONES DISPERSION/REPULSION */
287 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
288 vvdw6 = _mm_mul_pd(c6_00,rinvsix);
289 vvdw12 = _mm_mul_pd(c12_00,_mm_mul_pd(rinvsix,rinvsix));
290 vvdw = _mm_msub_pd( vvdw12,one_twelfth, _mm_mul_pd(vvdw6,one_sixth) );
291 fvdw = _mm_mul_pd(_mm_sub_pd(vvdw12,vvdw6),rinvsq00);
293 /* Update potential sum for this i atom from the interaction with this j atom. */
294 velecsum = _mm_add_pd(velecsum,velec);
295 vvdwsum = _mm_add_pd(vvdwsum,vvdw);
297 fscal = _mm_add_pd(felec,fvdw);
299 /* Update vectorial force */
300 fix0 = _mm_macc_pd(dx00,fscal,fix0);
301 fiy0 = _mm_macc_pd(dy00,fscal,fiy0);
302 fiz0 = _mm_macc_pd(dz00,fscal,fiz0);
304 fjx0 = _mm_macc_pd(dx00,fscal,fjx0);
305 fjy0 = _mm_macc_pd(dy00,fscal,fjy0);
306 fjz0 = _mm_macc_pd(dz00,fscal,fjz0);
308 /**************************
309 * CALCULATE INTERACTIONS *
310 **************************/
312 /* COULOMB ELECTROSTATICS */
313 velec = _mm_mul_pd(qq01,rinv01);
314 felec = _mm_mul_pd(velec,rinvsq01);
316 /* Update potential sum for this i atom from the interaction with this j atom. */
317 velecsum = _mm_add_pd(velecsum,velec);
321 /* Update vectorial force */
322 fix0 = _mm_macc_pd(dx01,fscal,fix0);
323 fiy0 = _mm_macc_pd(dy01,fscal,fiy0);
324 fiz0 = _mm_macc_pd(dz01,fscal,fiz0);
326 fjx1 = _mm_macc_pd(dx01,fscal,fjx1);
327 fjy1 = _mm_macc_pd(dy01,fscal,fjy1);
328 fjz1 = _mm_macc_pd(dz01,fscal,fjz1);
330 /**************************
331 * CALCULATE INTERACTIONS *
332 **************************/
334 /* COULOMB ELECTROSTATICS */
335 velec = _mm_mul_pd(qq02,rinv02);
336 felec = _mm_mul_pd(velec,rinvsq02);
338 /* Update potential sum for this i atom from the interaction with this j atom. */
339 velecsum = _mm_add_pd(velecsum,velec);
343 /* Update vectorial force */
344 fix0 = _mm_macc_pd(dx02,fscal,fix0);
345 fiy0 = _mm_macc_pd(dy02,fscal,fiy0);
346 fiz0 = _mm_macc_pd(dz02,fscal,fiz0);
348 fjx2 = _mm_macc_pd(dx02,fscal,fjx2);
349 fjy2 = _mm_macc_pd(dy02,fscal,fjy2);
350 fjz2 = _mm_macc_pd(dz02,fscal,fjz2);
352 /**************************
353 * CALCULATE INTERACTIONS *
354 **************************/
356 /* COULOMB ELECTROSTATICS */
357 velec = _mm_mul_pd(qq10,rinv10);
358 felec = _mm_mul_pd(velec,rinvsq10);
360 /* Update potential sum for this i atom from the interaction with this j atom. */
361 velecsum = _mm_add_pd(velecsum,velec);
365 /* Update vectorial force */
366 fix1 = _mm_macc_pd(dx10,fscal,fix1);
367 fiy1 = _mm_macc_pd(dy10,fscal,fiy1);
368 fiz1 = _mm_macc_pd(dz10,fscal,fiz1);
370 fjx0 = _mm_macc_pd(dx10,fscal,fjx0);
371 fjy0 = _mm_macc_pd(dy10,fscal,fjy0);
372 fjz0 = _mm_macc_pd(dz10,fscal,fjz0);
374 /**************************
375 * CALCULATE INTERACTIONS *
376 **************************/
378 /* COULOMB ELECTROSTATICS */
379 velec = _mm_mul_pd(qq11,rinv11);
380 felec = _mm_mul_pd(velec,rinvsq11);
382 /* Update potential sum for this i atom from the interaction with this j atom. */
383 velecsum = _mm_add_pd(velecsum,velec);
387 /* Update vectorial force */
388 fix1 = _mm_macc_pd(dx11,fscal,fix1);
389 fiy1 = _mm_macc_pd(dy11,fscal,fiy1);
390 fiz1 = _mm_macc_pd(dz11,fscal,fiz1);
392 fjx1 = _mm_macc_pd(dx11,fscal,fjx1);
393 fjy1 = _mm_macc_pd(dy11,fscal,fjy1);
394 fjz1 = _mm_macc_pd(dz11,fscal,fjz1);
396 /**************************
397 * CALCULATE INTERACTIONS *
398 **************************/
400 /* COULOMB ELECTROSTATICS */
401 velec = _mm_mul_pd(qq12,rinv12);
402 felec = _mm_mul_pd(velec,rinvsq12);
404 /* Update potential sum for this i atom from the interaction with this j atom. */
405 velecsum = _mm_add_pd(velecsum,velec);
409 /* Update vectorial force */
410 fix1 = _mm_macc_pd(dx12,fscal,fix1);
411 fiy1 = _mm_macc_pd(dy12,fscal,fiy1);
412 fiz1 = _mm_macc_pd(dz12,fscal,fiz1);
414 fjx2 = _mm_macc_pd(dx12,fscal,fjx2);
415 fjy2 = _mm_macc_pd(dy12,fscal,fjy2);
416 fjz2 = _mm_macc_pd(dz12,fscal,fjz2);
418 /**************************
419 * CALCULATE INTERACTIONS *
420 **************************/
422 /* COULOMB ELECTROSTATICS */
423 velec = _mm_mul_pd(qq20,rinv20);
424 felec = _mm_mul_pd(velec,rinvsq20);
426 /* Update potential sum for this i atom from the interaction with this j atom. */
427 velecsum = _mm_add_pd(velecsum,velec);
431 /* Update vectorial force */
432 fix2 = _mm_macc_pd(dx20,fscal,fix2);
433 fiy2 = _mm_macc_pd(dy20,fscal,fiy2);
434 fiz2 = _mm_macc_pd(dz20,fscal,fiz2);
436 fjx0 = _mm_macc_pd(dx20,fscal,fjx0);
437 fjy0 = _mm_macc_pd(dy20,fscal,fjy0);
438 fjz0 = _mm_macc_pd(dz20,fscal,fjz0);
440 /**************************
441 * CALCULATE INTERACTIONS *
442 **************************/
444 /* COULOMB ELECTROSTATICS */
445 velec = _mm_mul_pd(qq21,rinv21);
446 felec = _mm_mul_pd(velec,rinvsq21);
448 /* Update potential sum for this i atom from the interaction with this j atom. */
449 velecsum = _mm_add_pd(velecsum,velec);
453 /* Update vectorial force */
454 fix2 = _mm_macc_pd(dx21,fscal,fix2);
455 fiy2 = _mm_macc_pd(dy21,fscal,fiy2);
456 fiz2 = _mm_macc_pd(dz21,fscal,fiz2);
458 fjx1 = _mm_macc_pd(dx21,fscal,fjx1);
459 fjy1 = _mm_macc_pd(dy21,fscal,fjy1);
460 fjz1 = _mm_macc_pd(dz21,fscal,fjz1);
462 /**************************
463 * CALCULATE INTERACTIONS *
464 **************************/
466 /* COULOMB ELECTROSTATICS */
467 velec = _mm_mul_pd(qq22,rinv22);
468 felec = _mm_mul_pd(velec,rinvsq22);
470 /* Update potential sum for this i atom from the interaction with this j atom. */
471 velecsum = _mm_add_pd(velecsum,velec);
475 /* Update vectorial force */
476 fix2 = _mm_macc_pd(dx22,fscal,fix2);
477 fiy2 = _mm_macc_pd(dy22,fscal,fiy2);
478 fiz2 = _mm_macc_pd(dz22,fscal,fiz2);
480 fjx2 = _mm_macc_pd(dx22,fscal,fjx2);
481 fjy2 = _mm_macc_pd(dy22,fscal,fjy2);
482 fjz2 = _mm_macc_pd(dz22,fscal,fjz2);
484 gmx_mm_decrement_3rvec_2ptr_swizzle_pd(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
486 /* Inner loop uses 291 flops */
493 j_coord_offsetA = DIM*jnrA;
495 /* load j atom coordinates */
496 gmx_mm_load_3rvec_1ptr_swizzle_pd(x+j_coord_offsetA,
497 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
499 /* Calculate displacement vector */
500 dx00 = _mm_sub_pd(ix0,jx0);
501 dy00 = _mm_sub_pd(iy0,jy0);
502 dz00 = _mm_sub_pd(iz0,jz0);
503 dx01 = _mm_sub_pd(ix0,jx1);
504 dy01 = _mm_sub_pd(iy0,jy1);
505 dz01 = _mm_sub_pd(iz0,jz1);
506 dx02 = _mm_sub_pd(ix0,jx2);
507 dy02 = _mm_sub_pd(iy0,jy2);
508 dz02 = _mm_sub_pd(iz0,jz2);
509 dx10 = _mm_sub_pd(ix1,jx0);
510 dy10 = _mm_sub_pd(iy1,jy0);
511 dz10 = _mm_sub_pd(iz1,jz0);
512 dx11 = _mm_sub_pd(ix1,jx1);
513 dy11 = _mm_sub_pd(iy1,jy1);
514 dz11 = _mm_sub_pd(iz1,jz1);
515 dx12 = _mm_sub_pd(ix1,jx2);
516 dy12 = _mm_sub_pd(iy1,jy2);
517 dz12 = _mm_sub_pd(iz1,jz2);
518 dx20 = _mm_sub_pd(ix2,jx0);
519 dy20 = _mm_sub_pd(iy2,jy0);
520 dz20 = _mm_sub_pd(iz2,jz0);
521 dx21 = _mm_sub_pd(ix2,jx1);
522 dy21 = _mm_sub_pd(iy2,jy1);
523 dz21 = _mm_sub_pd(iz2,jz1);
524 dx22 = _mm_sub_pd(ix2,jx2);
525 dy22 = _mm_sub_pd(iy2,jy2);
526 dz22 = _mm_sub_pd(iz2,jz2);
528 /* Calculate squared distance and things based on it */
529 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
530 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
531 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
532 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
533 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
534 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
535 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
536 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
537 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
539 rinv00 = gmx_mm_invsqrt_pd(rsq00);
540 rinv01 = gmx_mm_invsqrt_pd(rsq01);
541 rinv02 = gmx_mm_invsqrt_pd(rsq02);
542 rinv10 = gmx_mm_invsqrt_pd(rsq10);
543 rinv11 = gmx_mm_invsqrt_pd(rsq11);
544 rinv12 = gmx_mm_invsqrt_pd(rsq12);
545 rinv20 = gmx_mm_invsqrt_pd(rsq20);
546 rinv21 = gmx_mm_invsqrt_pd(rsq21);
547 rinv22 = gmx_mm_invsqrt_pd(rsq22);
549 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
550 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
551 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
552 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
553 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
554 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
555 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
556 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
557 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
559 fjx0 = _mm_setzero_pd();
560 fjy0 = _mm_setzero_pd();
561 fjz0 = _mm_setzero_pd();
562 fjx1 = _mm_setzero_pd();
563 fjy1 = _mm_setzero_pd();
564 fjz1 = _mm_setzero_pd();
565 fjx2 = _mm_setzero_pd();
566 fjy2 = _mm_setzero_pd();
567 fjz2 = _mm_setzero_pd();
569 /**************************
570 * CALCULATE INTERACTIONS *
571 **************************/
573 /* COULOMB ELECTROSTATICS */
574 velec = _mm_mul_pd(qq00,rinv00);
575 felec = _mm_mul_pd(velec,rinvsq00);
577 /* LENNARD-JONES DISPERSION/REPULSION */
579 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
580 vvdw6 = _mm_mul_pd(c6_00,rinvsix);
581 vvdw12 = _mm_mul_pd(c12_00,_mm_mul_pd(rinvsix,rinvsix));
582 vvdw = _mm_msub_pd( vvdw12,one_twelfth, _mm_mul_pd(vvdw6,one_sixth) );
583 fvdw = _mm_mul_pd(_mm_sub_pd(vvdw12,vvdw6),rinvsq00);
585 /* Update potential sum for this i atom from the interaction with this j atom. */
586 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
587 velecsum = _mm_add_pd(velecsum,velec);
588 vvdw = _mm_unpacklo_pd(vvdw,_mm_setzero_pd());
589 vvdwsum = _mm_add_pd(vvdwsum,vvdw);
591 fscal = _mm_add_pd(felec,fvdw);
593 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
595 /* Update vectorial force */
596 fix0 = _mm_macc_pd(dx00,fscal,fix0);
597 fiy0 = _mm_macc_pd(dy00,fscal,fiy0);
598 fiz0 = _mm_macc_pd(dz00,fscal,fiz0);
600 fjx0 = _mm_macc_pd(dx00,fscal,fjx0);
601 fjy0 = _mm_macc_pd(dy00,fscal,fjy0);
602 fjz0 = _mm_macc_pd(dz00,fscal,fjz0);
604 /**************************
605 * CALCULATE INTERACTIONS *
606 **************************/
608 /* COULOMB ELECTROSTATICS */
609 velec = _mm_mul_pd(qq01,rinv01);
610 felec = _mm_mul_pd(velec,rinvsq01);
612 /* Update potential sum for this i atom from the interaction with this j atom. */
613 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
614 velecsum = _mm_add_pd(velecsum,velec);
618 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
620 /* Update vectorial force */
621 fix0 = _mm_macc_pd(dx01,fscal,fix0);
622 fiy0 = _mm_macc_pd(dy01,fscal,fiy0);
623 fiz0 = _mm_macc_pd(dz01,fscal,fiz0);
625 fjx1 = _mm_macc_pd(dx01,fscal,fjx1);
626 fjy1 = _mm_macc_pd(dy01,fscal,fjy1);
627 fjz1 = _mm_macc_pd(dz01,fscal,fjz1);
629 /**************************
630 * CALCULATE INTERACTIONS *
631 **************************/
633 /* COULOMB ELECTROSTATICS */
634 velec = _mm_mul_pd(qq02,rinv02);
635 felec = _mm_mul_pd(velec,rinvsq02);
637 /* Update potential sum for this i atom from the interaction with this j atom. */
638 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
639 velecsum = _mm_add_pd(velecsum,velec);
643 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
645 /* Update vectorial force */
646 fix0 = _mm_macc_pd(dx02,fscal,fix0);
647 fiy0 = _mm_macc_pd(dy02,fscal,fiy0);
648 fiz0 = _mm_macc_pd(dz02,fscal,fiz0);
650 fjx2 = _mm_macc_pd(dx02,fscal,fjx2);
651 fjy2 = _mm_macc_pd(dy02,fscal,fjy2);
652 fjz2 = _mm_macc_pd(dz02,fscal,fjz2);
654 /**************************
655 * CALCULATE INTERACTIONS *
656 **************************/
658 /* COULOMB ELECTROSTATICS */
659 velec = _mm_mul_pd(qq10,rinv10);
660 felec = _mm_mul_pd(velec,rinvsq10);
662 /* Update potential sum for this i atom from the interaction with this j atom. */
663 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
664 velecsum = _mm_add_pd(velecsum,velec);
668 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
670 /* Update vectorial force */
671 fix1 = _mm_macc_pd(dx10,fscal,fix1);
672 fiy1 = _mm_macc_pd(dy10,fscal,fiy1);
673 fiz1 = _mm_macc_pd(dz10,fscal,fiz1);
675 fjx0 = _mm_macc_pd(dx10,fscal,fjx0);
676 fjy0 = _mm_macc_pd(dy10,fscal,fjy0);
677 fjz0 = _mm_macc_pd(dz10,fscal,fjz0);
679 /**************************
680 * CALCULATE INTERACTIONS *
681 **************************/
683 /* COULOMB ELECTROSTATICS */
684 velec = _mm_mul_pd(qq11,rinv11);
685 felec = _mm_mul_pd(velec,rinvsq11);
687 /* Update potential sum for this i atom from the interaction with this j atom. */
688 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
689 velecsum = _mm_add_pd(velecsum,velec);
693 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
695 /* Update vectorial force */
696 fix1 = _mm_macc_pd(dx11,fscal,fix1);
697 fiy1 = _mm_macc_pd(dy11,fscal,fiy1);
698 fiz1 = _mm_macc_pd(dz11,fscal,fiz1);
700 fjx1 = _mm_macc_pd(dx11,fscal,fjx1);
701 fjy1 = _mm_macc_pd(dy11,fscal,fjy1);
702 fjz1 = _mm_macc_pd(dz11,fscal,fjz1);
704 /**************************
705 * CALCULATE INTERACTIONS *
706 **************************/
708 /* COULOMB ELECTROSTATICS */
709 velec = _mm_mul_pd(qq12,rinv12);
710 felec = _mm_mul_pd(velec,rinvsq12);
712 /* Update potential sum for this i atom from the interaction with this j atom. */
713 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
714 velecsum = _mm_add_pd(velecsum,velec);
718 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
720 /* Update vectorial force */
721 fix1 = _mm_macc_pd(dx12,fscal,fix1);
722 fiy1 = _mm_macc_pd(dy12,fscal,fiy1);
723 fiz1 = _mm_macc_pd(dz12,fscal,fiz1);
725 fjx2 = _mm_macc_pd(dx12,fscal,fjx2);
726 fjy2 = _mm_macc_pd(dy12,fscal,fjy2);
727 fjz2 = _mm_macc_pd(dz12,fscal,fjz2);
729 /**************************
730 * CALCULATE INTERACTIONS *
731 **************************/
733 /* COULOMB ELECTROSTATICS */
734 velec = _mm_mul_pd(qq20,rinv20);
735 felec = _mm_mul_pd(velec,rinvsq20);
737 /* Update potential sum for this i atom from the interaction with this j atom. */
738 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
739 velecsum = _mm_add_pd(velecsum,velec);
743 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
745 /* Update vectorial force */
746 fix2 = _mm_macc_pd(dx20,fscal,fix2);
747 fiy2 = _mm_macc_pd(dy20,fscal,fiy2);
748 fiz2 = _mm_macc_pd(dz20,fscal,fiz2);
750 fjx0 = _mm_macc_pd(dx20,fscal,fjx0);
751 fjy0 = _mm_macc_pd(dy20,fscal,fjy0);
752 fjz0 = _mm_macc_pd(dz20,fscal,fjz0);
754 /**************************
755 * CALCULATE INTERACTIONS *
756 **************************/
758 /* COULOMB ELECTROSTATICS */
759 velec = _mm_mul_pd(qq21,rinv21);
760 felec = _mm_mul_pd(velec,rinvsq21);
762 /* Update potential sum for this i atom from the interaction with this j atom. */
763 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
764 velecsum = _mm_add_pd(velecsum,velec);
768 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
770 /* Update vectorial force */
771 fix2 = _mm_macc_pd(dx21,fscal,fix2);
772 fiy2 = _mm_macc_pd(dy21,fscal,fiy2);
773 fiz2 = _mm_macc_pd(dz21,fscal,fiz2);
775 fjx1 = _mm_macc_pd(dx21,fscal,fjx1);
776 fjy1 = _mm_macc_pd(dy21,fscal,fjy1);
777 fjz1 = _mm_macc_pd(dz21,fscal,fjz1);
779 /**************************
780 * CALCULATE INTERACTIONS *
781 **************************/
783 /* COULOMB ELECTROSTATICS */
784 velec = _mm_mul_pd(qq22,rinv22);
785 felec = _mm_mul_pd(velec,rinvsq22);
787 /* Update potential sum for this i atom from the interaction with this j atom. */
788 velec = _mm_unpacklo_pd(velec,_mm_setzero_pd());
789 velecsum = _mm_add_pd(velecsum,velec);
793 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
795 /* Update vectorial force */
796 fix2 = _mm_macc_pd(dx22,fscal,fix2);
797 fiy2 = _mm_macc_pd(dy22,fscal,fiy2);
798 fiz2 = _mm_macc_pd(dz22,fscal,fiz2);
800 fjx2 = _mm_macc_pd(dx22,fscal,fjx2);
801 fjy2 = _mm_macc_pd(dy22,fscal,fjy2);
802 fjz2 = _mm_macc_pd(dz22,fscal,fjz2);
804 gmx_mm_decrement_3rvec_1ptr_swizzle_pd(f+j_coord_offsetA,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
806 /* Inner loop uses 291 flops */
809 /* End of innermost loop */
811 gmx_mm_update_iforce_3atom_swizzle_pd(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
812 f+i_coord_offset,fshift+i_shift_offset);
815 /* Update potential energies */
816 gmx_mm_update_1pot_pd(velecsum,kernel_data->energygrp_elec+ggid);
817 gmx_mm_update_1pot_pd(vvdwsum,kernel_data->energygrp_vdw+ggid);
819 /* Increment number of inner iterations */
820 inneriter += j_index_end - j_index_start;
822 /* Outer loop uses 20 flops */
825 /* Increment number of outer iterations */
828 /* Update outer/inner flops */
830 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_VF,outeriter*20 + inneriter*291);
833 * Gromacs nonbonded kernel: nb_kernel_ElecCoul_VdwLJ_GeomW3W3_F_avx_128_fma_double
834 * Electrostatics interaction: Coulomb
835 * VdW interaction: LennardJones
836 * Geometry: Water3-Water3
837 * Calculate force/pot: Force
840 nb_kernel_ElecCoul_VdwLJ_GeomW3W3_F_avx_128_fma_double
841 (t_nblist * gmx_restrict nlist,
842 rvec * gmx_restrict xx,
843 rvec * gmx_restrict ff,
844 t_forcerec * gmx_restrict fr,
845 t_mdatoms * gmx_restrict mdatoms,
846 nb_kernel_data_t gmx_unused * gmx_restrict kernel_data,
847 t_nrnb * gmx_restrict nrnb)
849 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
850 * just 0 for non-waters.
851 * Suffixes A,B refer to j loop unrolling done with SSE double precision, e.g. for the two different
852 * jnr indices corresponding to data put in the four positions in the SIMD register.
854 int i_shift_offset,i_coord_offset,outeriter,inneriter;
855 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
857 int j_coord_offsetA,j_coord_offsetB;
858 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
860 real *shiftvec,*fshift,*x,*f;
861 __m128d tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
863 __m128d ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
865 __m128d ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
867 __m128d ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
868 int vdwjidx0A,vdwjidx0B;
869 __m128d jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
870 int vdwjidx1A,vdwjidx1B;
871 __m128d jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
872 int vdwjidx2A,vdwjidx2B;
873 __m128d jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
874 __m128d dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
875 __m128d dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
876 __m128d dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
877 __m128d dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
878 __m128d dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
879 __m128d dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
880 __m128d dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
881 __m128d dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
882 __m128d dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
883 __m128d velec,felec,velecsum,facel,crf,krf,krf2;
886 __m128d rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
889 __m128d one_sixth = _mm_set1_pd(1.0/6.0);
890 __m128d one_twelfth = _mm_set1_pd(1.0/12.0);
891 __m128d dummy_mask,cutoff_mask;
892 __m128d signbit = gmx_mm_castsi128_pd( _mm_set_epi32(0x80000000,0x00000000,0x80000000,0x00000000) );
893 __m128d one = _mm_set1_pd(1.0);
894 __m128d two = _mm_set1_pd(2.0);
900 jindex = nlist->jindex;
902 shiftidx = nlist->shift;
904 shiftvec = fr->shift_vec[0];
905 fshift = fr->fshift[0];
906 facel = _mm_set1_pd(fr->epsfac);
907 charge = mdatoms->chargeA;
908 nvdwtype = fr->ntype;
910 vdwtype = mdatoms->typeA;
912 /* Setup water-specific parameters */
913 inr = nlist->iinr[0];
914 iq0 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+0]));
915 iq1 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+1]));
916 iq2 = _mm_mul_pd(facel,_mm_set1_pd(charge[inr+2]));
917 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
919 jq0 = _mm_set1_pd(charge[inr+0]);
920 jq1 = _mm_set1_pd(charge[inr+1]);
921 jq2 = _mm_set1_pd(charge[inr+2]);
922 vdwjidx0A = 2*vdwtype[inr+0];
923 qq00 = _mm_mul_pd(iq0,jq0);
924 c6_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A]);
925 c12_00 = _mm_set1_pd(vdwparam[vdwioffset0+vdwjidx0A+1]);
926 qq01 = _mm_mul_pd(iq0,jq1);
927 qq02 = _mm_mul_pd(iq0,jq2);
928 qq10 = _mm_mul_pd(iq1,jq0);
929 qq11 = _mm_mul_pd(iq1,jq1);
930 qq12 = _mm_mul_pd(iq1,jq2);
931 qq20 = _mm_mul_pd(iq2,jq0);
932 qq21 = _mm_mul_pd(iq2,jq1);
933 qq22 = _mm_mul_pd(iq2,jq2);
935 /* Avoid stupid compiler warnings */
943 /* Start outer loop over neighborlists */
944 for(iidx=0; iidx<nri; iidx++)
946 /* Load shift vector for this list */
947 i_shift_offset = DIM*shiftidx[iidx];
949 /* Load limits for loop over neighbors */
950 j_index_start = jindex[iidx];
951 j_index_end = jindex[iidx+1];
953 /* Get outer coordinate index */
955 i_coord_offset = DIM*inr;
957 /* Load i particle coords and add shift vector */
958 gmx_mm_load_shift_and_3rvec_broadcast_pd(shiftvec+i_shift_offset,x+i_coord_offset,
959 &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
961 fix0 = _mm_setzero_pd();
962 fiy0 = _mm_setzero_pd();
963 fiz0 = _mm_setzero_pd();
964 fix1 = _mm_setzero_pd();
965 fiy1 = _mm_setzero_pd();
966 fiz1 = _mm_setzero_pd();
967 fix2 = _mm_setzero_pd();
968 fiy2 = _mm_setzero_pd();
969 fiz2 = _mm_setzero_pd();
971 /* Start inner kernel loop */
972 for(jidx=j_index_start; jidx<j_index_end-1; jidx+=2)
975 /* Get j neighbor index, and coordinate index */
978 j_coord_offsetA = DIM*jnrA;
979 j_coord_offsetB = DIM*jnrB;
981 /* load j atom coordinates */
982 gmx_mm_load_3rvec_2ptr_swizzle_pd(x+j_coord_offsetA,x+j_coord_offsetB,
983 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
985 /* Calculate displacement vector */
986 dx00 = _mm_sub_pd(ix0,jx0);
987 dy00 = _mm_sub_pd(iy0,jy0);
988 dz00 = _mm_sub_pd(iz0,jz0);
989 dx01 = _mm_sub_pd(ix0,jx1);
990 dy01 = _mm_sub_pd(iy0,jy1);
991 dz01 = _mm_sub_pd(iz0,jz1);
992 dx02 = _mm_sub_pd(ix0,jx2);
993 dy02 = _mm_sub_pd(iy0,jy2);
994 dz02 = _mm_sub_pd(iz0,jz2);
995 dx10 = _mm_sub_pd(ix1,jx0);
996 dy10 = _mm_sub_pd(iy1,jy0);
997 dz10 = _mm_sub_pd(iz1,jz0);
998 dx11 = _mm_sub_pd(ix1,jx1);
999 dy11 = _mm_sub_pd(iy1,jy1);
1000 dz11 = _mm_sub_pd(iz1,jz1);
1001 dx12 = _mm_sub_pd(ix1,jx2);
1002 dy12 = _mm_sub_pd(iy1,jy2);
1003 dz12 = _mm_sub_pd(iz1,jz2);
1004 dx20 = _mm_sub_pd(ix2,jx0);
1005 dy20 = _mm_sub_pd(iy2,jy0);
1006 dz20 = _mm_sub_pd(iz2,jz0);
1007 dx21 = _mm_sub_pd(ix2,jx1);
1008 dy21 = _mm_sub_pd(iy2,jy1);
1009 dz21 = _mm_sub_pd(iz2,jz1);
1010 dx22 = _mm_sub_pd(ix2,jx2);
1011 dy22 = _mm_sub_pd(iy2,jy2);
1012 dz22 = _mm_sub_pd(iz2,jz2);
1014 /* Calculate squared distance and things based on it */
1015 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
1016 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
1017 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
1018 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
1019 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
1020 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
1021 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
1022 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
1023 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
1025 rinv00 = gmx_mm_invsqrt_pd(rsq00);
1026 rinv01 = gmx_mm_invsqrt_pd(rsq01);
1027 rinv02 = gmx_mm_invsqrt_pd(rsq02);
1028 rinv10 = gmx_mm_invsqrt_pd(rsq10);
1029 rinv11 = gmx_mm_invsqrt_pd(rsq11);
1030 rinv12 = gmx_mm_invsqrt_pd(rsq12);
1031 rinv20 = gmx_mm_invsqrt_pd(rsq20);
1032 rinv21 = gmx_mm_invsqrt_pd(rsq21);
1033 rinv22 = gmx_mm_invsqrt_pd(rsq22);
1035 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
1036 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
1037 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
1038 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
1039 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
1040 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
1041 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
1042 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
1043 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
1045 fjx0 = _mm_setzero_pd();
1046 fjy0 = _mm_setzero_pd();
1047 fjz0 = _mm_setzero_pd();
1048 fjx1 = _mm_setzero_pd();
1049 fjy1 = _mm_setzero_pd();
1050 fjz1 = _mm_setzero_pd();
1051 fjx2 = _mm_setzero_pd();
1052 fjy2 = _mm_setzero_pd();
1053 fjz2 = _mm_setzero_pd();
1055 /**************************
1056 * CALCULATE INTERACTIONS *
1057 **************************/
1059 /* COULOMB ELECTROSTATICS */
1060 velec = _mm_mul_pd(qq00,rinv00);
1061 felec = _mm_mul_pd(velec,rinvsq00);
1063 /* LENNARD-JONES DISPERSION/REPULSION */
1065 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
1066 fvdw = _mm_mul_pd(_mm_msub_pd(c12_00,rinvsix,c6_00),_mm_mul_pd(rinvsix,rinvsq00));
1068 fscal = _mm_add_pd(felec,fvdw);
1070 /* Update vectorial force */
1071 fix0 = _mm_macc_pd(dx00,fscal,fix0);
1072 fiy0 = _mm_macc_pd(dy00,fscal,fiy0);
1073 fiz0 = _mm_macc_pd(dz00,fscal,fiz0);
1075 fjx0 = _mm_macc_pd(dx00,fscal,fjx0);
1076 fjy0 = _mm_macc_pd(dy00,fscal,fjy0);
1077 fjz0 = _mm_macc_pd(dz00,fscal,fjz0);
1079 /**************************
1080 * CALCULATE INTERACTIONS *
1081 **************************/
1083 /* COULOMB ELECTROSTATICS */
1084 velec = _mm_mul_pd(qq01,rinv01);
1085 felec = _mm_mul_pd(velec,rinvsq01);
1089 /* Update vectorial force */
1090 fix0 = _mm_macc_pd(dx01,fscal,fix0);
1091 fiy0 = _mm_macc_pd(dy01,fscal,fiy0);
1092 fiz0 = _mm_macc_pd(dz01,fscal,fiz0);
1094 fjx1 = _mm_macc_pd(dx01,fscal,fjx1);
1095 fjy1 = _mm_macc_pd(dy01,fscal,fjy1);
1096 fjz1 = _mm_macc_pd(dz01,fscal,fjz1);
1098 /**************************
1099 * CALCULATE INTERACTIONS *
1100 **************************/
1102 /* COULOMB ELECTROSTATICS */
1103 velec = _mm_mul_pd(qq02,rinv02);
1104 felec = _mm_mul_pd(velec,rinvsq02);
1108 /* Update vectorial force */
1109 fix0 = _mm_macc_pd(dx02,fscal,fix0);
1110 fiy0 = _mm_macc_pd(dy02,fscal,fiy0);
1111 fiz0 = _mm_macc_pd(dz02,fscal,fiz0);
1113 fjx2 = _mm_macc_pd(dx02,fscal,fjx2);
1114 fjy2 = _mm_macc_pd(dy02,fscal,fjy2);
1115 fjz2 = _mm_macc_pd(dz02,fscal,fjz2);
1117 /**************************
1118 * CALCULATE INTERACTIONS *
1119 **************************/
1121 /* COULOMB ELECTROSTATICS */
1122 velec = _mm_mul_pd(qq10,rinv10);
1123 felec = _mm_mul_pd(velec,rinvsq10);
1127 /* Update vectorial force */
1128 fix1 = _mm_macc_pd(dx10,fscal,fix1);
1129 fiy1 = _mm_macc_pd(dy10,fscal,fiy1);
1130 fiz1 = _mm_macc_pd(dz10,fscal,fiz1);
1132 fjx0 = _mm_macc_pd(dx10,fscal,fjx0);
1133 fjy0 = _mm_macc_pd(dy10,fscal,fjy0);
1134 fjz0 = _mm_macc_pd(dz10,fscal,fjz0);
1136 /**************************
1137 * CALCULATE INTERACTIONS *
1138 **************************/
1140 /* COULOMB ELECTROSTATICS */
1141 velec = _mm_mul_pd(qq11,rinv11);
1142 felec = _mm_mul_pd(velec,rinvsq11);
1146 /* Update vectorial force */
1147 fix1 = _mm_macc_pd(dx11,fscal,fix1);
1148 fiy1 = _mm_macc_pd(dy11,fscal,fiy1);
1149 fiz1 = _mm_macc_pd(dz11,fscal,fiz1);
1151 fjx1 = _mm_macc_pd(dx11,fscal,fjx1);
1152 fjy1 = _mm_macc_pd(dy11,fscal,fjy1);
1153 fjz1 = _mm_macc_pd(dz11,fscal,fjz1);
1155 /**************************
1156 * CALCULATE INTERACTIONS *
1157 **************************/
1159 /* COULOMB ELECTROSTATICS */
1160 velec = _mm_mul_pd(qq12,rinv12);
1161 felec = _mm_mul_pd(velec,rinvsq12);
1165 /* Update vectorial force */
1166 fix1 = _mm_macc_pd(dx12,fscal,fix1);
1167 fiy1 = _mm_macc_pd(dy12,fscal,fiy1);
1168 fiz1 = _mm_macc_pd(dz12,fscal,fiz1);
1170 fjx2 = _mm_macc_pd(dx12,fscal,fjx2);
1171 fjy2 = _mm_macc_pd(dy12,fscal,fjy2);
1172 fjz2 = _mm_macc_pd(dz12,fscal,fjz2);
1174 /**************************
1175 * CALCULATE INTERACTIONS *
1176 **************************/
1178 /* COULOMB ELECTROSTATICS */
1179 velec = _mm_mul_pd(qq20,rinv20);
1180 felec = _mm_mul_pd(velec,rinvsq20);
1184 /* Update vectorial force */
1185 fix2 = _mm_macc_pd(dx20,fscal,fix2);
1186 fiy2 = _mm_macc_pd(dy20,fscal,fiy2);
1187 fiz2 = _mm_macc_pd(dz20,fscal,fiz2);
1189 fjx0 = _mm_macc_pd(dx20,fscal,fjx0);
1190 fjy0 = _mm_macc_pd(dy20,fscal,fjy0);
1191 fjz0 = _mm_macc_pd(dz20,fscal,fjz0);
1193 /**************************
1194 * CALCULATE INTERACTIONS *
1195 **************************/
1197 /* COULOMB ELECTROSTATICS */
1198 velec = _mm_mul_pd(qq21,rinv21);
1199 felec = _mm_mul_pd(velec,rinvsq21);
1203 /* Update vectorial force */
1204 fix2 = _mm_macc_pd(dx21,fscal,fix2);
1205 fiy2 = _mm_macc_pd(dy21,fscal,fiy2);
1206 fiz2 = _mm_macc_pd(dz21,fscal,fiz2);
1208 fjx1 = _mm_macc_pd(dx21,fscal,fjx1);
1209 fjy1 = _mm_macc_pd(dy21,fscal,fjy1);
1210 fjz1 = _mm_macc_pd(dz21,fscal,fjz1);
1212 /**************************
1213 * CALCULATE INTERACTIONS *
1214 **************************/
1216 /* COULOMB ELECTROSTATICS */
1217 velec = _mm_mul_pd(qq22,rinv22);
1218 felec = _mm_mul_pd(velec,rinvsq22);
1222 /* Update vectorial force */
1223 fix2 = _mm_macc_pd(dx22,fscal,fix2);
1224 fiy2 = _mm_macc_pd(dy22,fscal,fiy2);
1225 fiz2 = _mm_macc_pd(dz22,fscal,fiz2);
1227 fjx2 = _mm_macc_pd(dx22,fscal,fjx2);
1228 fjy2 = _mm_macc_pd(dy22,fscal,fjy2);
1229 fjz2 = _mm_macc_pd(dz22,fscal,fjz2);
1231 gmx_mm_decrement_3rvec_2ptr_swizzle_pd(f+j_coord_offsetA,f+j_coord_offsetB,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1233 /* Inner loop uses 277 flops */
1236 if(jidx<j_index_end)
1240 j_coord_offsetA = DIM*jnrA;
1242 /* load j atom coordinates */
1243 gmx_mm_load_3rvec_1ptr_swizzle_pd(x+j_coord_offsetA,
1244 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1246 /* Calculate displacement vector */
1247 dx00 = _mm_sub_pd(ix0,jx0);
1248 dy00 = _mm_sub_pd(iy0,jy0);
1249 dz00 = _mm_sub_pd(iz0,jz0);
1250 dx01 = _mm_sub_pd(ix0,jx1);
1251 dy01 = _mm_sub_pd(iy0,jy1);
1252 dz01 = _mm_sub_pd(iz0,jz1);
1253 dx02 = _mm_sub_pd(ix0,jx2);
1254 dy02 = _mm_sub_pd(iy0,jy2);
1255 dz02 = _mm_sub_pd(iz0,jz2);
1256 dx10 = _mm_sub_pd(ix1,jx0);
1257 dy10 = _mm_sub_pd(iy1,jy0);
1258 dz10 = _mm_sub_pd(iz1,jz0);
1259 dx11 = _mm_sub_pd(ix1,jx1);
1260 dy11 = _mm_sub_pd(iy1,jy1);
1261 dz11 = _mm_sub_pd(iz1,jz1);
1262 dx12 = _mm_sub_pd(ix1,jx2);
1263 dy12 = _mm_sub_pd(iy1,jy2);
1264 dz12 = _mm_sub_pd(iz1,jz2);
1265 dx20 = _mm_sub_pd(ix2,jx0);
1266 dy20 = _mm_sub_pd(iy2,jy0);
1267 dz20 = _mm_sub_pd(iz2,jz0);
1268 dx21 = _mm_sub_pd(ix2,jx1);
1269 dy21 = _mm_sub_pd(iy2,jy1);
1270 dz21 = _mm_sub_pd(iz2,jz1);
1271 dx22 = _mm_sub_pd(ix2,jx2);
1272 dy22 = _mm_sub_pd(iy2,jy2);
1273 dz22 = _mm_sub_pd(iz2,jz2);
1275 /* Calculate squared distance and things based on it */
1276 rsq00 = gmx_mm_calc_rsq_pd(dx00,dy00,dz00);
1277 rsq01 = gmx_mm_calc_rsq_pd(dx01,dy01,dz01);
1278 rsq02 = gmx_mm_calc_rsq_pd(dx02,dy02,dz02);
1279 rsq10 = gmx_mm_calc_rsq_pd(dx10,dy10,dz10);
1280 rsq11 = gmx_mm_calc_rsq_pd(dx11,dy11,dz11);
1281 rsq12 = gmx_mm_calc_rsq_pd(dx12,dy12,dz12);
1282 rsq20 = gmx_mm_calc_rsq_pd(dx20,dy20,dz20);
1283 rsq21 = gmx_mm_calc_rsq_pd(dx21,dy21,dz21);
1284 rsq22 = gmx_mm_calc_rsq_pd(dx22,dy22,dz22);
1286 rinv00 = gmx_mm_invsqrt_pd(rsq00);
1287 rinv01 = gmx_mm_invsqrt_pd(rsq01);
1288 rinv02 = gmx_mm_invsqrt_pd(rsq02);
1289 rinv10 = gmx_mm_invsqrt_pd(rsq10);
1290 rinv11 = gmx_mm_invsqrt_pd(rsq11);
1291 rinv12 = gmx_mm_invsqrt_pd(rsq12);
1292 rinv20 = gmx_mm_invsqrt_pd(rsq20);
1293 rinv21 = gmx_mm_invsqrt_pd(rsq21);
1294 rinv22 = gmx_mm_invsqrt_pd(rsq22);
1296 rinvsq00 = _mm_mul_pd(rinv00,rinv00);
1297 rinvsq01 = _mm_mul_pd(rinv01,rinv01);
1298 rinvsq02 = _mm_mul_pd(rinv02,rinv02);
1299 rinvsq10 = _mm_mul_pd(rinv10,rinv10);
1300 rinvsq11 = _mm_mul_pd(rinv11,rinv11);
1301 rinvsq12 = _mm_mul_pd(rinv12,rinv12);
1302 rinvsq20 = _mm_mul_pd(rinv20,rinv20);
1303 rinvsq21 = _mm_mul_pd(rinv21,rinv21);
1304 rinvsq22 = _mm_mul_pd(rinv22,rinv22);
1306 fjx0 = _mm_setzero_pd();
1307 fjy0 = _mm_setzero_pd();
1308 fjz0 = _mm_setzero_pd();
1309 fjx1 = _mm_setzero_pd();
1310 fjy1 = _mm_setzero_pd();
1311 fjz1 = _mm_setzero_pd();
1312 fjx2 = _mm_setzero_pd();
1313 fjy2 = _mm_setzero_pd();
1314 fjz2 = _mm_setzero_pd();
1316 /**************************
1317 * CALCULATE INTERACTIONS *
1318 **************************/
1320 /* COULOMB ELECTROSTATICS */
1321 velec = _mm_mul_pd(qq00,rinv00);
1322 felec = _mm_mul_pd(velec,rinvsq00);
1324 /* LENNARD-JONES DISPERSION/REPULSION */
1326 rinvsix = _mm_mul_pd(_mm_mul_pd(rinvsq00,rinvsq00),rinvsq00);
1327 fvdw = _mm_mul_pd(_mm_msub_pd(c12_00,rinvsix,c6_00),_mm_mul_pd(rinvsix,rinvsq00));
1329 fscal = _mm_add_pd(felec,fvdw);
1331 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1333 /* Update vectorial force */
1334 fix0 = _mm_macc_pd(dx00,fscal,fix0);
1335 fiy0 = _mm_macc_pd(dy00,fscal,fiy0);
1336 fiz0 = _mm_macc_pd(dz00,fscal,fiz0);
1338 fjx0 = _mm_macc_pd(dx00,fscal,fjx0);
1339 fjy0 = _mm_macc_pd(dy00,fscal,fjy0);
1340 fjz0 = _mm_macc_pd(dz00,fscal,fjz0);
1342 /**************************
1343 * CALCULATE INTERACTIONS *
1344 **************************/
1346 /* COULOMB ELECTROSTATICS */
1347 velec = _mm_mul_pd(qq01,rinv01);
1348 felec = _mm_mul_pd(velec,rinvsq01);
1352 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1354 /* Update vectorial force */
1355 fix0 = _mm_macc_pd(dx01,fscal,fix0);
1356 fiy0 = _mm_macc_pd(dy01,fscal,fiy0);
1357 fiz0 = _mm_macc_pd(dz01,fscal,fiz0);
1359 fjx1 = _mm_macc_pd(dx01,fscal,fjx1);
1360 fjy1 = _mm_macc_pd(dy01,fscal,fjy1);
1361 fjz1 = _mm_macc_pd(dz01,fscal,fjz1);
1363 /**************************
1364 * CALCULATE INTERACTIONS *
1365 **************************/
1367 /* COULOMB ELECTROSTATICS */
1368 velec = _mm_mul_pd(qq02,rinv02);
1369 felec = _mm_mul_pd(velec,rinvsq02);
1373 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1375 /* Update vectorial force */
1376 fix0 = _mm_macc_pd(dx02,fscal,fix0);
1377 fiy0 = _mm_macc_pd(dy02,fscal,fiy0);
1378 fiz0 = _mm_macc_pd(dz02,fscal,fiz0);
1380 fjx2 = _mm_macc_pd(dx02,fscal,fjx2);
1381 fjy2 = _mm_macc_pd(dy02,fscal,fjy2);
1382 fjz2 = _mm_macc_pd(dz02,fscal,fjz2);
1384 /**************************
1385 * CALCULATE INTERACTIONS *
1386 **************************/
1388 /* COULOMB ELECTROSTATICS */
1389 velec = _mm_mul_pd(qq10,rinv10);
1390 felec = _mm_mul_pd(velec,rinvsq10);
1394 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1396 /* Update vectorial force */
1397 fix1 = _mm_macc_pd(dx10,fscal,fix1);
1398 fiy1 = _mm_macc_pd(dy10,fscal,fiy1);
1399 fiz1 = _mm_macc_pd(dz10,fscal,fiz1);
1401 fjx0 = _mm_macc_pd(dx10,fscal,fjx0);
1402 fjy0 = _mm_macc_pd(dy10,fscal,fjy0);
1403 fjz0 = _mm_macc_pd(dz10,fscal,fjz0);
1405 /**************************
1406 * CALCULATE INTERACTIONS *
1407 **************************/
1409 /* COULOMB ELECTROSTATICS */
1410 velec = _mm_mul_pd(qq11,rinv11);
1411 felec = _mm_mul_pd(velec,rinvsq11);
1415 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1417 /* Update vectorial force */
1418 fix1 = _mm_macc_pd(dx11,fscal,fix1);
1419 fiy1 = _mm_macc_pd(dy11,fscal,fiy1);
1420 fiz1 = _mm_macc_pd(dz11,fscal,fiz1);
1422 fjx1 = _mm_macc_pd(dx11,fscal,fjx1);
1423 fjy1 = _mm_macc_pd(dy11,fscal,fjy1);
1424 fjz1 = _mm_macc_pd(dz11,fscal,fjz1);
1426 /**************************
1427 * CALCULATE INTERACTIONS *
1428 **************************/
1430 /* COULOMB ELECTROSTATICS */
1431 velec = _mm_mul_pd(qq12,rinv12);
1432 felec = _mm_mul_pd(velec,rinvsq12);
1436 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1438 /* Update vectorial force */
1439 fix1 = _mm_macc_pd(dx12,fscal,fix1);
1440 fiy1 = _mm_macc_pd(dy12,fscal,fiy1);
1441 fiz1 = _mm_macc_pd(dz12,fscal,fiz1);
1443 fjx2 = _mm_macc_pd(dx12,fscal,fjx2);
1444 fjy2 = _mm_macc_pd(dy12,fscal,fjy2);
1445 fjz2 = _mm_macc_pd(dz12,fscal,fjz2);
1447 /**************************
1448 * CALCULATE INTERACTIONS *
1449 **************************/
1451 /* COULOMB ELECTROSTATICS */
1452 velec = _mm_mul_pd(qq20,rinv20);
1453 felec = _mm_mul_pd(velec,rinvsq20);
1457 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1459 /* Update vectorial force */
1460 fix2 = _mm_macc_pd(dx20,fscal,fix2);
1461 fiy2 = _mm_macc_pd(dy20,fscal,fiy2);
1462 fiz2 = _mm_macc_pd(dz20,fscal,fiz2);
1464 fjx0 = _mm_macc_pd(dx20,fscal,fjx0);
1465 fjy0 = _mm_macc_pd(dy20,fscal,fjy0);
1466 fjz0 = _mm_macc_pd(dz20,fscal,fjz0);
1468 /**************************
1469 * CALCULATE INTERACTIONS *
1470 **************************/
1472 /* COULOMB ELECTROSTATICS */
1473 velec = _mm_mul_pd(qq21,rinv21);
1474 felec = _mm_mul_pd(velec,rinvsq21);
1478 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1480 /* Update vectorial force */
1481 fix2 = _mm_macc_pd(dx21,fscal,fix2);
1482 fiy2 = _mm_macc_pd(dy21,fscal,fiy2);
1483 fiz2 = _mm_macc_pd(dz21,fscal,fiz2);
1485 fjx1 = _mm_macc_pd(dx21,fscal,fjx1);
1486 fjy1 = _mm_macc_pd(dy21,fscal,fjy1);
1487 fjz1 = _mm_macc_pd(dz21,fscal,fjz1);
1489 /**************************
1490 * CALCULATE INTERACTIONS *
1491 **************************/
1493 /* COULOMB ELECTROSTATICS */
1494 velec = _mm_mul_pd(qq22,rinv22);
1495 felec = _mm_mul_pd(velec,rinvsq22);
1499 fscal = _mm_unpacklo_pd(fscal,_mm_setzero_pd());
1501 /* Update vectorial force */
1502 fix2 = _mm_macc_pd(dx22,fscal,fix2);
1503 fiy2 = _mm_macc_pd(dy22,fscal,fiy2);
1504 fiz2 = _mm_macc_pd(dz22,fscal,fiz2);
1506 fjx2 = _mm_macc_pd(dx22,fscal,fjx2);
1507 fjy2 = _mm_macc_pd(dy22,fscal,fjy2);
1508 fjz2 = _mm_macc_pd(dz22,fscal,fjz2);
1510 gmx_mm_decrement_3rvec_1ptr_swizzle_pd(f+j_coord_offsetA,fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1512 /* Inner loop uses 277 flops */
1515 /* End of innermost loop */
1517 gmx_mm_update_iforce_3atom_swizzle_pd(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1518 f+i_coord_offset,fshift+i_shift_offset);
1520 /* Increment number of inner iterations */
1521 inneriter += j_index_end - j_index_start;
1523 /* Outer loop uses 18 flops */
1526 /* Increment number of outer iterations */
1529 /* Update outer/inner flops */
1531 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_F,outeriter*18 + inneriter*277);