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38 #ifndef GMX_FILEIO_FILENM_H
39 #define GMX_FILEIO_FILENM_H
41 #include "../legacyheaders/typedefs.h"
47 /* this enum should correspond to the array deffile in gmxlib/filenm.c */
50 efTRX, efTRO, efTRN, efTRR, efTRJ, efCOMPRESSED, efXTC, efTNG,
52 efSTX, efSTO, efGRO, efG96, efPDB, efBRK, efENT, efESP, efPQR,
57 efTPX, efTPS, efTPR, efTPA, efTPB,
58 efTEX, efRTP, efATP, efHDB,
60 efMAP, efEPS, efMAT, efM2P,
70 int ftp; /* File type (see enum above) */
71 const char *opt; /* Command line option */
72 const char *fn; /* File name (as set in source code) */
73 unsigned long flag; /* Flag for all kinds of info (see defs)*/
74 int nfiles; /* number of files */
75 char **fns; /* File names */
84 #define ffRW (ffREAD | ffWRITE)
85 #define ffOPTRD (ffREAD | ffOPT)
86 #define ffOPTWR (ffWRITE| ffOPT)
87 #define ffOPTRW (ffRW | ffOPT)
88 #define ffLIBRD (ffREAD | ffLIB)
89 #define ffLIBOPTRD (ffOPTRD | ffLIB)
90 #define ffRDMULT (ffREAD | ffMULT)
91 #define ffOPTRDMULT (ffRDMULT | ffOPT)
92 #define ffWRMULT (ffWRITE | ffMULT)
93 #define ffOPTWRMULT (ffWRMULT | ffOPT)
95 const char *ftp2ext(int ftp);
96 /* Return extension for filetype */
98 const char *ftp2ext_generic(int ftp);
99 /* Return extension for filetype, and a generic name for generic types
102 const char *ftp2ext_with_dot(int ftp);
103 /* Return extension for filetype with a leading dot */
105 int ftp2generic_count(int ftp);
106 /* Return the number of filetypes for a generic filetype */
108 const int *ftp2generic_list(int ftp);
109 /* Return the list of filetypes for a generic filetype */
111 const char *ftp2desc(int ftp);
112 /* Return description for file type */
114 const char *ftp2defnm(int ftp);
115 /* Return default file name for file type */
117 const char *ftp2ftype(int ftp);
118 /* Return Binary or ASCII depending on file type */
120 void parse_file_args(int *argc, char *argv[], int nf, t_filenm fnm[],
121 const char *deffnm, gmx_bool bReadNode);
122 /* Parse command line for file names. When bKeep is set args are
123 * not removed from argv. */
125 const char *opt2fn(const char *opt, int nfile, const t_filenm fnm[]);
126 /* Return the filename belonging to cmd-line option opt, or NULL when
129 const char *opt2fn_master(const char *opt, int nfile,
130 const t_filenm fnm[], t_commrec *cr);
131 /* Return the filename belonging to cmd-line option opt, or NULL when
132 * no such option or not running on master */
135 int opt2fns(char **fns[], const char *opt, int nfile,
136 const t_filenm fnm[]);
137 /* Return the filenames belonging to cmd-line option opt, or NULL when
140 #define opt2FILE(opt, nfile, fnm, mode) gmx_ffopen(opt2fn(opt, nfile, fnm), mode)
141 /* Return a file pointer from the filename (see above) */
143 int fn2ftp(const char *fn);
144 /* Return the filetype corrsponding to filename */
146 const char *ftp2fn(int ftp, int nfile, const t_filenm fnm[]);
147 /* Return the first file name with type ftp, or NULL when none found. */
149 int ftp2fns(char **fns[], int ftp, int nfile, const t_filenm fnm[]);
150 /* Return the number of files for the first option with type ftp
151 and the files in **fns[] (will be allocated), or NULL when none found. */
153 #define ftp2FILE(ftp, nfile, fnm, mode) gmx_ffopen(ftp2fn(ftp, nfile, fnm), mode)
154 /* Return a file pointer from the filename (see above) */
156 gmx_bool ftp2bSet(int ftp, int nfile, const t_filenm fnm[]);
157 /* Return TRUE when this file type has been found on the cmd-line */
159 gmx_bool opt2bSet(const char *opt, int nfile, const t_filenm fnm[]);
160 /* Return TRUE when this option has been found on the cmd-line */
162 const char *opt2fn_null(const char *opt, int nfile, const t_filenm fnm[]);
163 /* Return the filenm belonging top cmd-line option opt, or NULL when
165 * Also return NULL when opt is optional and option is not set.
168 const char *ftp2fn_null(int ftp, int nfile, const t_filenm fnm[]);
169 /* Return the first file name with type ftp, or NULL when none found.
170 * Also return NULL when ftp is optional and option is not set.
173 gmx_bool is_optional(const t_filenm *fnm);
174 /* Return whether or not this filenm is optional */
176 gmx_bool is_output(const t_filenm *fnm);
177 /* Return whether or not this filenm is output */
179 gmx_bool is_set(const t_filenm *fnm);
180 /* Return whether or not this filenm is set */
182 /* When we do checkpointing, this routine is called to check for previous
183 * output files and append a '.partNNNN' suffix before the (output) file extensions.
185 int add_suffix_to_output_names(t_filenm *fnm, int nfile, const char *suffix);
187 /* duplicate the filename list (to make a private copy for each thread,
189 t_filenm *dup_tfn(int nf, const t_filenm tfn[]);
191 /* Free memory allocated for file names by parse_file_args(). */
192 void done_filenms(int nf, t_filenm fnm[]);
198 #endif /* GMX_FILEIO_FILENM_H */